Contig-U15254-1
Contig ID Contig-U15254-1
Contig update 2004. 6.11
Contig sequence
>Contig-U15254-1 (Contig-U15254-1Q) /CSM_Contig/Contig-U15254-1Q.Seq.d
ATTCAAATGACTCAAGATAGAATTGGGCCAGAGAAACCAAGCTATGCAGA
TATTGCACAAAGAGCATTTGGAAGAGTTGGTGAATTATTTGTATGTTTTA
TGAACTTTTTAGTTACAATGAGTATTTGTGTTTCATATCTCATTTTAATT
GGTCAAAATATTGATTATTTTACAAAAATTGGCNACATTCCAATGATTTG
GATTGTTTTACCTTTTATTTTATTATTAACATTTTTAACTGATATGAAAT
ATTTAGGATTTACATCAATTTTTGGAGCATTGTCATTAATTTTAGCAATG
TTTACAATTGTAATTTATGGTATAAAGGATAACCATGTTCATCCACTTTC
AGATTATACATTTGATTTCAAGCAAATACCATTATGGTTTGGAAATGCAG
CATTCTTCTTTTGCAATCATATCGTTGTAATTCCAGTTAGTCATGCAAGT
GGTGATAATAAGAGATATCCAAATGTATTGAATTTTGCTATGATTTTCAT
TACAGTGATTAATGTTGCATTTGCAGTGTTATGTTACCTTTATTATAATT
TCATTTCTGGTGGTATTCCATCTGCAATCGTCGATGTATTACCAAACGGA
ATTTTCGCAAATATTGTAAAGGTTTGCGTCGTGTTGGAATTGTCATGTTC
ATTCCCATTGATTTTCGCAGCTGGTTTAAATGTTGTAGATTCATCAATTC
AAATTTTCCATCATCATTTCAATGCATTCCCAGAATTGGATGGTTCTTCT
GTGAAAACTCCATTCTTTTCAAGAAATTGGAAATTTTATTTAATCCGTAT
CGTCTTTTGTAGTATGTTGGCTGGTATCGCTTCTGCCGTTACAAACTTTG
GTAATTACACTTCACTCATTGGTTCTTTAATGTTGGCTGTCGCTGGTTTC
GTTGTACCACCATTACTCTCTTTAAGATTTTTCCCTCAACAAGCTATTCC
TTGGAAAGTTTTCCATATCACTATTACTATCTTTGGTATTATGGCAACTA
TCTTGGGTACTTATTTATCAATTAAAGCTTTTGTAGATCCATCAAATTAA
ATAAATATAATAATAATAATAATAATAATGATAATAATATTAATAATAAT
AATAATAATAATAATAATAATATAAAATCAACTCAATCTCAAATTATTGT
TTAATCTATCAATAATAACCAAGAAAAAAAAAAAAAAAGA

Gap no gap
Contig length 1190
Chromosome number (1..6, M) 6
Chromosome length 3595308
Start point 2414136
End point 2412947
Strand (PLUS/MINUS) MINUS
Number of clones 5
Number of EST 6
Link to clone list U15254
List of clone(s)

est1=SLD847F,1,268
est2=SSD341F,217,902
est3=SSH718Z,792,1173
est4=SSB560Z,835,1173
est5=SSH739Z,857,1190
est6=SLD847Z,909,1174
Translated Amino Acid sequence
IQMTQDRIGPEKPSYADIAQRAFGRVGELFVCFMNFLVTMSICVSYLILIGQNIDYFTKI
GXIPMIWIVLPFILLLTFLTDMKYLGFTSIFGALSLILAMFTIVIYGIKDNHVHPLSDYT
FDFKQIPLWFGNAAFFFCNHIVVIPVSHASGDNKRYPNVLNFAMIFITVINVAFAVLCYL
YYNFISGGIPSAIVDVLPNGIFANIVKVCVVLELSCSFPLIFAAGLNVVDSSIQIFHHHF
NAFPELDGSSVKTPFFSRNWKFYLIRIVFCSMLAGIASAVTNFGNYTSLIGSLMLAVAGF
VVPPLLSLRFFPQQAIPWKVFHITITIFGIMATILGTYLSIKAFVDPSN*iniiiiiiim
iiiliiiiiiiiii*nqlnlkllfnlsiitkkkkkk


Translated Amino Acid sequence (All Frames)
Frame A:
IQMTQDRIGPEKPSYADIAQRAFGRVGELFVCFMNFLVTMSICVSYLILIGQNIDYFTKI
GXIPMIWIVLPFILLLTFLTDMKYLGFTSIFGALSLILAMFTIVIYGIKDNHVHPLSDYT
FDFKQIPLWFGNAAFFFCNHIVVIPVSHASGDNKRYPNVLNFAMIFITVINVAFAVLCYL
YYNFISGGIPSAIVDVLPNGIFANIVKVCVVLELSCSFPLIFAAGLNVVDSSIQIFHHHF
NAFPELDGSSVKTPFFSRNWKFYLIRIVFCSMLAGIASAVTNFGNYTSLIGSLMLAVAGF
VVPPLLSLRFFPQQAIPWKVFHITITIFGIMATILGTYLSIKAFVDPSN*iniiiiiiim
iiiliiiiiiiiii*nqlnlkllfnlsiitkkkkkk


Frame B:
fk*lkielgqrnqamqilhkehleelvnylyvl*tf*lq*vfvfhisf*lvkiliilqkl
atfq*fglfyllfyy*hf*li*ni*dlhqflehch*f*qclql*fmv*ritmfihfqiih
lisskyhyglemqhssfaiisl*fqlvmqvviirdiqmy*ill*fslq*lmlhlqcyvtf
iiisflvvfhlqssmyyqtefsqil*rfascwnchvhsh*fsqlv*ml*ihqfkfsiiis
mhsqnwmvll*klhsfqeignfi*svssfvvcwlvsllplqtlvitlhslvl*cwlslvs
lyhhysl*dfslnklflgkfsislllslvlwqlswvliyqlkll*ihqik*i********
**y**********ykinsisnycliyq**prkkkkk


Frame C:
sndsr*nwaretklcryctksiwksw*iicmfyelfsyneylcfishfnwsky*lfyknw
xhsndldcftfyfiinifn*yeifriyinfwsivinfsnvyncnlwykg*pcsstfrlyi
*fqantimvwkcsilllqsyrcnss*sckw***eiskciefcydfhysd*ccicsvmlpl
l*fhfwwysicnrrcitkrnfrkyckglrrvgivmfipidfrswfkccrfinsnfpssfq
ciprigwffcensilfkkleilfnpyrll*yvgwyrfcryklw*lhfthwffnvgcrwfr
cttitlfkifpstsyslesfpyhyyylwyygnylgylfin*sfcrsiklnkynnnnnnnd
nninnnnnnnnnnikstqsqiiv*sinnnqekkkkr


own update 2004. 6.23
Homology vs CSM-cDNA
Query= Contig-U15254-1 (Contig-U15254-1Q)
/CSM_Contig/Contig-U15254-1Q.Seq.d
(1190 letters)

Database: CSM
8402 sequences; 8,075,542 total letters


Score E
Sequences producing significant alignments: (bits) Value

Contig-U15254-1 (Contig-U15254-1Q) /CSM_Contig/Conti... 2064 0.0
Contig-U09660-1 (Contig-U09660-1Q) /CSM_Contig/Conti... 42 0.002
Contig-U16321-1 (Contig-U16321-1Q) /CSM_Contig/Conti... 38 0.030
Contig-U15892-1 (Contig-U15892-1Q) /CSM_Contig/Conti... 38 0.030
Contig-U15600-1 (Contig-U15600-1Q) /CSM_Contig/Conti... 38 0.030
Contig-U04806-1 (Contig-U04806-1Q) /CSM_Contig/Conti... 38 0.030
Contig-U01260-1 (Contig-U01260-1Q) /CSM_Contig/Conti... 38 0.030
Contig-U12515-1 (Contig-U12515-1Q) /CSM_Contig/Conti... 36 0.12
Contig-U11392-1 (Contig-U11392-1Q) /CSM_Contig/Conti... 36 0.12
Contig-U11191-1 (Contig-U11191-1Q) /CSM_Contig/Conti... 36 0.12

>Contig-U15254-1 (Contig-U15254-1Q) /CSM_Contig/Contig-U15254-1Q.Seq.d
Length = 1190

Score = 2064 bits (1041), Expect = 0.0
Identities = 1044/1044 (100%)
Strand = Plus / Plus


Query: 1 attcaaatgactcaagatagaattgggccagagaaaccaagctatgcagatattgcacaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 attcaaatgactcaagatagaattgggccagagaaaccaagctatgcagatattgcacaa 60


Query: 61 agagcatttggaagagttggtgaattatttgtatgttttatgaactttttagttacaatg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 agagcatttggaagagttggtgaattatttgtatgttttatgaactttttagttacaatg 120


Query: 121 agtatttgtgtttcatatctcattttaattggtcaaaatattgattattttacaaaaatt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 agtatttgtgtttcatatctcattttaattggtcaaaatattgattattttacaaaaatt 180


Query: 181 ggcnacattccaatgatttggattgttttaccttttattttattattaacatttttaact 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ggcnacattccaatgatttggattgttttaccttttattttattattaacatttttaact 240


Query: 241 gatatgaaatatttaggatttacatcaatttttggagcattgtcattaattttagcaatg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gatatgaaatatttaggatttacatcaatttttggagcattgtcattaattttagcaatg 300


Query: 301 tttacaattgtaatttatggtataaaggataaccatgttcatccactttcagattataca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tttacaattgtaatttatggtataaaggataaccatgttcatccactttcagattataca 360


Query: 361 tttgatttcaagcaaataccattatggtttggaaatgcagcattcttcttttgcaatcat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 tttgatttcaagcaaataccattatggtttggaaatgcagcattcttcttttgcaatcat 420


Query: 421 atcgttgtaattccagttagtcatgcaagtggtgataataagagatatccaaatgtattg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 atcgttgtaattccagttagtcatgcaagtggtgataataagagatatccaaatgtattg 480


Query: 481 aattttgctatgattttcattacagtgattaatgttgcatttgcagtgttatgttacctt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 aattttgctatgattttcattacagtgattaatgttgcatttgcagtgttatgttacctt 540


Query: 541 tattataatttcatttctggtggtattccatctgcaatcgtcgatgtattaccaaacgga 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 tattataatttcatttctggtggtattccatctgcaatcgtcgatgtattaccaaacgga 600


Query: 601 attttcgcaaatattgtaaaggtttgcgtcgtgttggaattgtcatgttcattcccattg 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 attttcgcaaatattgtaaaggtttgcgtcgtgttggaattgtcatgttcattcccattg 660


Query: 661 attttcgcagctggtttaaatgttgtagattcatcaattcaaattttccatcatcatttc 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 attttcgcagctggtttaaatgttgtagattcatcaattcaaattttccatcatcatttc 720


Query: 721 aatgcattcccagaattggatggttcttctgtgaaaactccattcttttcaagaaattgg 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 aatgcattcccagaattggatggttcttctgtgaaaactccattcttttcaagaaattgg 780


Query: 781 aaattttatttaatccgtatcgtcttttgtagtatgttggctggtatcgcttctgccgtt 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 aaattttatttaatccgtatcgtcttttgtagtatgttggctggtatcgcttctgccgtt 840


Query: 841 acaaactttggtaattacacttcactcattggttctttaatgttggctgtcgctggtttc 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 841 acaaactttggtaattacacttcactcattggttctttaatgttggctgtcgctggtttc 900


Query: 901 gttgtaccaccattactctctttaagatttttccctcaacaagctattccttggaaagtt 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 901 gttgtaccaccattactctctttaagatttttccctcaacaagctattccttggaaagtt 960


Query: 961 ttccatatcactattactatctttggtattatggcaactatcttgggtacttatttatca 1020
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 961 ttccatatcactattactatctttggtattatggcaactatcttgggtacttatttatca 1020


Query: 1021 attaaagcttttgtagatccatca 1044
||||||||||||||||||||||||
Sbjct: 1021 attaaagcttttgtagatccatca 1044


Score = 95.6 bits (48), Expect = 2e-19
Identities = 48/48 (100%)
Strand = Plus / Plus


Query: 1126 aatcaactcaatctcaaattattgtttaatctatcaataataaccaag 1173
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1126 aatcaactcaatctcaaattattgtttaatctatcaataataaccaag 1173


>Contig-U09660-1 (Contig-U09660-1Q) /CSM_Contig/Contig-U09660-1Q.Seq.d
Length = 1801

Score = 42.1 bits (21), Expect = 0.002
Identities = 24/25 (96%)
Strand = Plus / Minus


Query: 213 ttttattttattattaacattttta 237
|||||||||||||||| ||||||||
Sbjct: 1766 ttttattttattattatcattttta 1742


Score = 32.2 bits (16), Expect = 1.9
Identities = 16/16 (100%)
Strand = Plus / Minus


Query: 213 ttttattttattatta 228
||||||||||||||||
Sbjct: 1506 ttttattttattatta 1491


>Contig-U16321-1 (Contig-U16321-1Q) /CSM_Contig/Contig-U16321-1Q.Seq.d
Length = 1255

Score = 38.2 bits (19), Expect = 0.030
Identities = 22/23 (95%)
Strand = Plus / Minus


Query: 771 aagaaattggaaattttatttaa 793
|||||||||||||| ||||||||
Sbjct: 413 aagaaattggaaatgttatttaa 391


Database: CSM
Posted date: Jun 21, 2004 1:35 PM
Number of letters in database: 8,075,542
Number of sequences in database: 8402

Lambda K H
1.37 0.711 1.31

Gapped
Lambda K H
1.37 0.711 1.31


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 24,908
Number of Sequences: 8402
Number of extensions: 24908
Number of successful extensions: 2618
Number of sequences better than 10.0: 353
length of query: 1190
length of database: 8,075,542
effective HSP length: 16
effective length of query: 1174
effective length of database: 7,941,110
effective search space: 9322863140
effective search space used: 9322863140
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 15 (30.2 bits)
dna update 2009. 1.18
Homology vs DNA
Query= Contig-U15254-1 (Contig-U15254-1Q) /CSM_Contig/Contig-U15254-1Q.Seq.d
(1190 letters)

Database: ddbj_B
98,226,423 sequences; 98,766,808,389 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value N

(AU038436) Dictyostelium discoideum slug cDNA, clone SSH718. 502 e-137 1
(AU061364) Dictyostelium discoideum slug cDNA, clone SLD847. 400 e-107 1
(AU037169) Dictyostelium discoideum slug cDNA, clone SSB560. 369 2e-97 1
(AU038452) Dictyostelium discoideum slug cDNA, clone SSH739. 365 3e-96 1
(AU072070) Dictyostelium discoideum slug cDNA, clone SSD341. 363 1e-95 1
(AU052727) Dictyostelium discoideum slug cDNA, clone SLD847. 270 1e-67 1
(CP000976) Borrelia duttonii Ly, complete genome. 36 1.8 16
(AC087700) Trypanosoma brucei clone RPCI93-26P8a, *** SEQUEN... 42 1.9 2
(DQ775918) Synthetic construct Vibrio cholerae clone FLH2006... 46 3.1 1
(AL805920) Mouse DNA sequence from clone RP23-162M7 on chrom... 46 3.1 1
(AM467213) Vitis vinifera, whole genome shotgun sequence, co... 46 3.1 1
(AM454841) Vitis vinifera contig VV78X124721.2, whole genome... 46 3.1 1
(AC155958) Xenopus tropicalis clone CH216-1C3, WORKING DRAFT... 46 3.1 1
(AC092742) Mus musculus strain C57BL6/J clone RP23-158O21, W... 46 3.1 1
(AC201543) Strongylocentrotus purpuratus clone R3-3102L21, W... 46 3.1 1
(CL044587) CH216-61I8_Sp6.1 CH216 Xenopus (Silurana) tropica... 46 3.1 1
(CL029696) CH216-29F12_RM1.1 CH216 Xenopus (Silurana) tropic... 46 3.1 1
(CL026279) CH216-22O1_RM1.1 CH216 Xenopus (Silurana) tropica... 46 3.1 1
(CL025403) CH216-21J14_RM1.1 CH216 Xenopus (Silurana) tropic... 46 3.1 1
(CL025401) CH216-21J13_RM1.1 CH216 Xenopus (Silurana) tropic... 46 3.1 1
(CL016715) CH216-1C3_RM1.1 CH216 Xenopus (Silurana) tropical... 46 3.1 1
(DW511670) GH_TMIRS_155_G01_R Cotton Normalized Library dT p... 46 3.1 1
(DW511669) GH_TMIRS_155_G01_F Cotton Normalized Library dT p... 46 3.1 1
(CO126539) GR__Eb10J22.f GR__Eb Gossypium raimondii cDNA clo... 46 3.1 1
(CO084713) GR__Ea01H15.r GR__Ea Gossypium raimondii cDNA clo... 46 3.1 1
(CO084712) GR__Ea01H15.f GR__Ea Gossypium raimondii cDNA clo... 46 3.1 1
(CN697363) E0393B06-5 NIA Mouse E10.5 whole embryo cDNA libr... 46 3.1 1
(CN691539) E0310H05-5 NIA Mouse E10.5 whole embryo cDNA libr... 46 3.1 1
(BQ413712) GA__Ed0077H11r Gossypium arboreum 7-10 dpa fiber ... 46 3.1 1
(BQ405299) GA__Ed0081B02f Gossypium arboreum 7-10 dpa fiber ... 46 3.1 1
(BQ405048) GA__Ed0077H11f Gossypium arboreum 7-10 dpa fiber ... 46 3.1 1
(FG911610) UCRVU08_CCNS7883_b1 Cowpea IT97K-461-4 Mixed Tiss... 46 3.1 1
(FF389902) MOOBU15TF MOO Vigna unguiculata cDNA 5', mRNA seq... 46 3.1 1
(CP000994) Borrelia recurrentis A1 plasmid pl124, complete s... 46 3.1 1
(CP000979) Borrelia duttonii Ly plasmid pl165, complete sequ... 46 3.1 1
(CP000626) Vibrio cholerae O395 chromosome 1, complete genome. 46 3.1 1
(AE003853) Vibrio cholerae O1 biovar eltor str. N16961 chrom... 46 3.1 1
(FG703550) G1144P324RO20.T0 Anolis carolinensis pooled norma... 36 5.4 3
(AZ693346) ENTLA39TF Entamoeba histolytica Sheared DNA Entam... 32 8.4 3
(AC225512) Medicago truncatula clone mth2-8n17, WORKING DRAF... 40 9.7 5
(BH932877) ode83g12.b1 B.oleracea002 Brassica oleracea genom... 36 9.9 2

>(AU038436) Dictyostelium discoideum slug cDNA, clone SSH718.
Length = 382

Score = 502 bits (253), Expect = e-137
Identities = 253/253 (100%)
Strand = Plus / Plus


Query: 792 aatccgtatcgtcttttgtagtatgttggctggtatcgcttctgccgttacaaactttgg 851
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aatccgtatcgtcttttgtagtatgttggctggtatcgcttctgccgttacaaactttgg 60


Query: 852 taattacacttcactcattggttctttaatgttggctgtcgctggtttcgttgtaccacc 911
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 taattacacttcactcattggttctttaatgttggctgtcgctggtttcgttgtaccacc 120


Query: 912 attactctctttaagatttttccctcaacaagctattccttggaaagttttccatatcac 971
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 attactctctttaagatttttccctcaacaagctattccttggaaagttttccatatcac 180


Query: 972 tattactatctttggtattatggcaactatcttgggtacttatttatcaattaaagcttt 1031
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tattactatctttggtattatggcaactatcttgggtacttatttatcaattaaagcttt 240


Query: 1032 tgtagatccatca 1044
|||||||||||||
Sbjct: 241 tgtagatccatca 253

Lambda K H
1.37 0.711 1.31

Matrix: blastn matrix:1 -3
Number of Sequences: 98226423
Number of Hits to DB: 1,205,219,863
Number of extensions: 69964866
Number of successful extensions: 5536138
Number of sequences better than 10.0: 41
Length of query: 1190
Length of database: 98,766,808,389
Length adjustment: 24
Effective length of query: 1166
Effective length of database: 100,704,341,533
Effective search space: 117421262227478
Effective search space used: 117421262227478
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)

protein update 2009. 7.15
Homology vs Protein
Query= Contig-U15254-1 (Contig-U15254-1Q) /CSM_Contig/Contig-U15254-1Q.Seq.d
(1190 letters)

Database: nrp_B
3,236,559 sequences; 1,051,180,864 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value

BT033888_1(BT033888|pid:none) Zea mays full-length cDNA clone ZM... 97 1e-18
AC016795_19(AC016795|pid:none) Arabidopsis thaliana chromosome I... 96 3e-18
AP005774_15(AP005774|pid:none) Oryza sativa Japonica Group genom... 95 4e-18
AP008213_565(AP008213|pid:none) Oryza sativa (japonica cultivar-... 95 4e-18
AK096251_1(AK096251|pid:none) Homo sapiens cDNA FLJ38932 fis, cl... 86 2e-15
BC047374_1(BC047374|pid:none) Homo sapiens solute carrier family... 85 4e-15
AE014134_1553(AE014134|pid:none) Drosophila melanogaster chromos... 85 6e-15
AE014134_1551(AE014134|pid:none) Drosophila melanogaster chromos... 85 6e-15
AM920428_716(AM920428|pid:none) Penicillium chrysogenum Wisconsi... 85 6e-15
AE014134_1556(AE014134|pid:none) Drosophila melanogaster chromos... 85 6e-15
U39783_1(U39783|pid:none) Arabidopsis thaliana amino acid transp... 84 8e-15
BC166414_1(BC166414|pid:none) Rattus norvegicus solute carrier f... 84 8e-15
AK032074_1(AK032074|pid:none) Mus musculus adult male medulla ob... 84 1e-14
AY211262_1(AY211262|pid:none) Mus musculus amino acid transport ... 83 2e-14
(Q8K4D3) RecName: Full=Proton-coupled amino acid transporter 1; ... 83 2e-14
(Q8K415) RecName: Full=Proton-coupled amino acid transporter 2; ... 82 3e-14
AL513466_15(AL513466|pid:none) Neurospora crassa DNA linkage gro... 82 4e-14
AL035539_2(AL035539|pid:none) Arabidopsis thaliana DNA chromosom... 81 6e-14
AB168788_1(AB168788|pid:none) Macaca fascicularis testis cDNA, c... 80 1e-13
AM393725_1(AM393725|pid:none) Synthetic construct Homo sapiens c... 80 2e-13
(Q8BHK3) RecName: Full=Proton-coupled amino acid transporter 2; ... 80 2e-13
BT037407_1(BT037407|pid:none) Zea mays full-length cDNA clone ZM... 79 3e-13
(Q924A5) RecName: Full=Proton-coupled amino acid transporter 1; ... 79 3e-13
BC101102_1(BC101102|pid:none) Homo sapiens solute carrier family... 79 4e-13
AB011474_5(AB011474|pid:none) Arabidopsis thaliana genomic DNA, ... 77 1e-12
BT011236_1(BT011236|pid:none) Arabidopsis thaliana At5g65990 gen... 77 1e-12
AE014298_2637(AE014298|pid:none) Drosophila melanogaster chromos... 77 1e-12
DQ115393_2(DQ115393|pid:none) Saccharomyces cerevisiae Pol1p (PO... 77 2e-12
AY162214_1(AY162214|pid:none) Homo sapiens proton/amino acid tra... 77 2e-12
BT037234_1(BT037234|pid:none) Zea mays full-length cDNA clone ZM... 76 2e-12
AY050801_1(AY050801|pid:none) Arabidopsis thaliana unknown prote... 75 5e-12
AF516142_1(AF516142|pid:none) Homo sapiens proton-coupled amino ... 74 8e-12
CU928174_402(CU928174|pid:none) Zygosaccharomyces rouxii strain ... 74 1e-11
AM471155_1(AM471155|pid:none) Vitis vinifera contig VV78X080581.... 74 1e-11
BT068131_1(BT068131|pid:none) Zea mays full-length cDNA clone ZM... 74 1e-11
BT000792_1(BT000792|pid:none) Arabidopsis thaliana clone RAFL05-... 72 3e-11
AC004261_3(AC004261|pid:none) Arabidopsis thaliana chromosome 2 ... 72 3e-11
BT061845_1(BT061845|pid:none) Zea mays full-length cDNA clone ZM... 72 3e-11
S42372(S42372)hypothetical protein T20G5.6 - Caenorhabditis eleg... 72 3e-11
E84813(E84813)hypothetical protein At2g39130 [imported] - Arabid... 72 3e-11
(P34579) RecName: Full=Vesicular GABA transporter; AltName: Full... 72 3e-11
AY989816_1(AY989816|pid:none) Oryctolagus cuniculus proton/amino... 72 5e-11
AY102114_1(AY102114|pid:none) Arabidopsis thaliana AT5g02170/T7H... 70 1e-10
EU963484_1(EU963484|pid:none) Zea mays clone 263136 amino acid t... 70 1e-10
AY094740_1(AY094740|pid:none) Drosophila melanogaster GM01221 fu... 70 1e-10
AL353993_13(AL353993|pid:none) Arabidopsis thaliana DNA chromoso... 70 1e-10
AE014296_1998(AE014296|pid:none) Drosophila melanogaster chromos... 70 1e-10
BT042853_1(BT042853|pid:none) Zea mays full-length cDNA clone ZM... 70 1e-10
BT036860_1(BT036860|pid:none) Zea mays full-length cDNA clone ZM... 70 1e-10
CR855141_8(CR855141|pid:none) Oryza sativa (indica cultivar-grou... 69 3e-10
CR954216_301(CR954216|pid:none) Ostreococcus tauri strain OTTH05... 68 7e-10
AK106202_1(AK106202|pid:none) Oryza sativa Japonica Group cDNA c... 67 1e-09
CR855169_12(CR855169|pid:none) Oryza sativa (indica cultivar-gro... 67 1e-09
AP003504_2(AP003504|pid:none) Oryza sativa Japonica Group genomi... 67 1e-09
AE017344_605(AE017344|pid:none) Cryptococcus neoformans var. neo... 67 1e-09
CR382125_601(CR382125|pid:none) Kluyveromyces lactis strain NRRL... 67 2e-09
AK107472_1(AK107472|pid:none) Oryza sativa Japonica Group cDNA c... 66 2e-09
AJ295983_1(AJ295983|pid:none) Homo sapiens mRNA for hypothetical... 66 2e-09
(Q4V8B1) RecName: Full=Proton-coupled amino acid transporter 3; ... 66 2e-09
AB025615_9(AB025615|pid:none) Arabidopsis thaliana genomic DNA, ... 66 2e-09
AP003333_32(AP003333|pid:none) Oryza sativa Japonica Group genom... 66 3e-09
AC149128_5(AC149128|pid:none) Medicago truncatula chromosome 7 c... 65 5e-09
AM471155_2(AM471155|pid:none) Vitis vinifera contig VV78X080581.... 65 5e-09
AM488068_1(AM488068|pid:none) Vitis vinifera contig VV78X124178.... 65 6e-09
AF453745_1(AF453745|pid:none) Mus musculus proton/amino acid tra... 64 8e-09
(Q8IZM9) RecName: Full=Probable sodium-coupled neutral amino aci... 62 4e-08
CP000595_254(CP000595|pid:none) Ostreococcus lucimarinus CCE9901... 62 4e-08
AY227111_1(AY227111|pid:none) Homo sapiens clone IMAGE:2549054 t... 61 7e-08
AE014296_2000(AE014296|pid:none) Drosophila melanogaster chromos... 61 7e-08
AC146631_3(AC146631|pid:none) Medicago truncatula clone mth2-7g1... 61 9e-08
AL162508_22(AL162508|pid:none) Arabidopsis thaliana DNA chromoso... 60 2e-07
AF025468_4(AF025468|pid:none) Caenorhabditis elegans cosmid T27A... 60 2e-07
AK303839_1(AK303839|pid:none) Homo sapiens cDNA FLJ56844 complet... 59 3e-07
BT067469_1(BT067469|pid:none) Zea mays full-length cDNA clone ZM... 58 6e-07
EU956591_1(EU956591|pid:none) Zea mays clone 1567488 amino acid ... 58 6e-07
(Q495N2) RecName: Full=Proton-coupled amino acid transporter 3; ... 58 8e-07
AK127978_1(AK127978|pid:none) Homo sapiens cDNA FLJ46093 fis, cl... 58 8e-07
AC135927_6(AC135927|pid:none) Oryza sativa (japonica cultivar-gr... 57 1e-06
BT066836_1(BT066836|pid:none) Zea mays full-length cDNA clone ZM... 57 1e-06
AK131483_1(AK131483|pid:none) Homo sapiens cDNA FLJ16658 fis, cl... 57 1e-06
BC101092_1(BC101092|pid:none) Homo sapiens solute carrier family... 57 1e-06
FN392321_303(FN392321|pid:none) Pichia pastoris GS115 chromosome... 57 1e-06
AK074023_1(AK074023|pid:none) Oryza sativa Japonica Group cDNA c... 57 2e-06
CR382136_735(CR382136|pid:none) Debaryomyces hansenii strain CBS... 57 2e-06
AE014296_422(AE014296|pid:none) Drosophila melanogaster chromoso... 56 2e-06
AY119064_1(AY119064|pid:none) Drosophila melanogaster LP07767 fu... 56 3e-06
AY089387_1(AY089387|pid:none) Drosophila melanogaster AT21186 fu... 55 5e-06
(P39981) RecName: Full=Vacuolar amino acid transporter 2; &S505... 55 6e-06
BC157917_1(BC157917|pid:none) Mus musculus solute carrier family... 55 6e-06
CP000499_467(CP000499|pid:none) Pichia stipitis CBS 6054 chromos... 55 6e-06
BT036233_1(BT036233|pid:none) Zea mays full-length cDNA clone ZM... 54 8e-06
AC011436_19(AC011436|pid:none) Arabidopsis thaliana chromosome I... 54 8e-06
AL021481_6(AL021481|pid:none) Caenorhabditis elegans YAC Y43F4B,... 54 1e-05
BC155884_1(BC155884|pid:none) Xenopus laevis hypothetical protei... 54 1e-05
CP001323_852(CP001323|pid:none) Micromonas sp. RCC299 chromosome... 54 1e-05
AC011436_18(AC011436|pid:none) Arabidopsis thaliana chromosome I... 53 2e-05
AE016819_905(AE016819|pid:none) Ashbya gossypii (= Eremothecium ... 53 2e-05
EF624240_1(EF624240|pid:none) Humulus lupulus amino acid-polyami... 53 2e-05
BC151987_1(BC151987|pid:none) Danio rerio im:6896251, mRNA (cDNA... 53 2e-05
AL606460_6(AL606460|pid:none) Oryza sativa genomic DNA, chromoso... 52 3e-05
AC004697_23(AC004697|pid:none) Arabidopsis thaliana chromosome 2... 52 3e-05
(Q6WWW3) RecName: Full=Probable sodium-coupled neutral amino aci... 52 5e-05
CR382124_402(CR382124|pid:none) Kluyveromyces lactis strain NRRL... 51 7e-05
AL442110_7(AL442110|pid:none) Oryza sativa genomic DNA, chromoso... 51 9e-05
T16658(T16658) hypothetical protein R02F2.8 - Caenorhabditis ele... 51 9e-05
(P36062) RecName: Full=Vacuolar amino acid transporter 3; &S379... 51 9e-05
AJ457193_1(AJ457193|pid:none) Acyrthosiphon pisum mRNA for putat... 50 1e-04
AF125971_5(AF125971|pid:none) Caenorhabditis elegans cosmid Y4C6... 50 1e-04
AM454394_3(AM454394|pid:none) Vitis vinifera contig VV78X133763.... 50 2e-04
(Q28HE5) RecName: Full=Probable sodium-coupled neutral amino aci... 50 2e-04
CP000586_360(CP000586|pid:none) Ostreococcus lucimarinus CCE9901... 50 2e-04
CR382137_559(CR382137|pid:none) Debaryomyces hansenii strain CBS... 49 3e-04
CR382133_408(CR382133|pid:none) Debaryomyces hansenii strain CBS... 48 6e-04
FN314832_1(FN314832|pid:none) Schistosoma japonicum isolate Anhu... 48 6e-04
AM920435_70(AM920435|pid:none) Penicillium chrysogenum Wisconsin... 48 8e-04
AC073555_18(AC073555|pid:none) Arabidopsis thaliana chromosome 1... 47 0.001
CR380948_188(CR380948|pid:none) Candida glabrata strain CBS138 c... 47 0.001
AC122169_3(AC122169|pid:none) Medicago truncatula clone mth2-9m5... 47 0.001
AL590451_118(AL590451|pid:none) chromosome IX of strain GB-M1 of... 47 0.001
AE013599_1244(AE013599|pid:none) Drosophila melanogaster chromos... 46 0.002
(Q6PCF9) RecName: Full=Putative sodium-coupled neutral amino aci... 46 0.002
AM989980_85(AM989980|pid:none) Zygosaccharomyces rouxii strain C... 46 0.003
AK228702_1(AK228702|pid:none) Arabidopsis thaliana mRNA for hypo... 46 0.003
EF676242_1(EF676242|pid:none) Picea sitchensis clone WS02723_J06... 46 0.003
CR382123_97(CR382123|pid:none) Kluyveromyces lactis strain NRRL ... 45 0.004
AM270318_18(AM270318|pid:none) Aspergillus niger contig An14c011... 45 0.004
AP007150_585(AP007150|pid:none) Aspergillus oryzae RIB40 genomic... 45 0.005
BT087536_1(BT087536|pid:none) Zea mays full-length cDNA clone ZM... 45 0.005
AC007020_21(AC007020|pid:none) Arabidopsis thaliana chromosome 2... 45 0.007
AM920437_3(AM920437|pid:none) Penicillium chrysogenum Wisconsin ... 45 0.007
AC122169_2(AC122169|pid:none) Medicago truncatula clone mth2-9m5... 44 0.009
AM920427_87(AM920427|pid:none) Penicillium chrysogenum Wisconsin... 44 0.009
BC155885_1(BC155885|pid:none) Xenopus laevis hypothetical protei... 44 0.011
CR859927_1(CR859927|pid:none) Pongo abelii mRNA; cDNA DKFZp469P1... 44 0.011
AY526248_1(AY526248|pid:none) Trypanosoma cruzi putative amino a... 44 0.011
AL021474_2(AL021474|pid:none) Caenorhabditis elegans YAC Y32F6A,... 44 0.015
(Q5XH90) RecName: Full=Sodium-coupled neutral amino acid transpo... 43 0.019
(P40501) RecName: Full=Vacuolar amino acid transporter 7; &S497... 43 0.025
AE013599_781(AE013599|pid:none) Drosophila melanogaster chromoso... 43 0.025
BC153282_1(BC153282|pid:none) Bos taurus solute carrier family 3... 43 0.025
CR382132_1226(CR382132|pid:none) Yarrowia lipolytica strain CLIB... 42 0.033
AK007977_1(AK007977|pid:none) Mus musculus 10 day old male pancr... 42 0.043
BC082300_1(BC082300|pid:none) Mus musculus solute carrier family... 42 0.043
AE017346_144(AE017346|pid:none) Cryptococcus neoformans var. neo... 42 0.043
AK032245_1(AK032245|pid:none) Mus musculus adult male olfactory ... 42 0.043
(Q5I012) RecName: Full=Putative sodium-coupled neutral amino aci... 42 0.043
BC088811_1(BC088811|pid:none) Mus musculus solute carrier family... 42 0.043
AE016817_196(AE016817|pid:none) Ashbya gossypii (= Eremothecium ... 42 0.043
AK077667_1(AK077667|pid:none) Mus musculus 8 days embryo whole b... 42 0.056
FN319718_1(FN319718|pid:none) Schistosoma japonicum isolate Anhu... 42 0.056
(Q3U1J0) RecName: Full=Sodium-coupled neutral amino acid transpo... 42 0.056
AP003984_2(AP003984|pid:none) Oryza sativa Japonica Group genomi... 41 0.073
AF276870_1(AF276870|pid:none) Rattus norvegicus amino acid trans... 41 0.095
(A2VCW5) RecName: Full=Sodium-coupled neutral amino acid transpo... 41 0.095
AK054485_1(AK054485|pid:none) Mus musculus 2 days pregnant adult... 41 0.095
AE016816_256(AE016816|pid:none) Ashbya gossypii (= Eremothecium ... 41 0.095
AM920437_1808(AM920437|pid:none) Penicillium chrysogenum Wiscons... 40 0.12
CP000497_133(CP000497|pid:none) Pichia stipitis CBS 6054 chromos... 40 0.12
AY228364_1(AY228364|pid:none) Homo sapiens truncated SLC36A2 pro... 40 0.12
DQ465378_1(DQ465378|pid:none) Oreochromis mossambicus clone SSH ... 40 0.16
(Q9HBR0) RecName: Full=Putative sodium-coupled neutral amino aci... 40 0.16
CU633900_755(CU633900|pid:none) Podospora anserina genomic DNA c... 40 0.21
AP007175_445(AP007175|pid:none) Aspergillus oryzae RIB40 genomic... 40 0.21
CU633454_13(CU633454|pid:none) Podospora anserina genomic DNA ch... 40 0.21
FM992689_299(FM992689|pid:none) Candida dubliniensis CD36 chromo... 40 0.21
AY526245_1(AY526245|pid:none) Trypanosoma cruzi putative amino a... 40 0.21
AY259515_1(AY259515|pid:none) Leishmania donovani amino acid per... 39 0.28
AM270057_33(AM270057|pid:none) Aspergillus niger contig An03c016... 39 0.28
FM992690_510(FM992690|pid:none) Candida dubliniensis CD36 chromo... 39 0.28
BT058890_1(BT058890|pid:none) Salmo salar clone ssal-rgf-511-195... 39 0.28
AM270094_32(AM270094|pid:none) Aspergillus niger contig An04c033... 39 0.28
AB011477_1(AB011477|pid:none) Arabidopsis thaliana genomic DNA, ... 39 0.28
AK070297_1(AK070297|pid:none) Oryza sativa Japonica Group cDNA c... 39 0.28
AM920436_1683(AM920436|pid:none) Penicillium chrysogenum Wiscons... 39 0.36
CP001098_11(CP001098|pid:none) Halothermothrix orenii H 168, com... 39 0.36
BC027721_1(BC027721|pid:none) Homo sapiens solute carrier family... 39 0.47
CU928169_326(CU928169|pid:none) Kluyveromyces thermotolerans str... 39 0.47
CP001087_2641(CP001087|pid:none) Desulfobacterium autotrophicum ... 39 0.47
AM494970_169(AM494970|pid:none) Leishmania braziliensis chromoso... 39 0.47
AJ575144_1(AJ575144|pid:none) Sordaria macrospora partial smu623... 39 0.47
(Q8WUX1) RecName: Full=Sodium-coupled neutral amino acid transpo... 39 0.47
CP000866_118(CP000866|pid:none) Nitrosopumilus maritimus SCM1, c... 39 0.47
CR954206_388(CR954206|pid:none) Ostreococcus tauri strain OTTH05... 38 0.62
DQ993184_9(DQ993184|pid:none) Tilletia indica strain F11 mitocho... 38 0.81
(Q9JM15) RecName: Full=Sodium-coupled neutral amino acid transpo... 38 0.81
FN364590_1(FN364590|pid:none) Schistosoma mansoni genome sequenc... 38 0.81
AC151725_24(AC151725|pid:none) Medicago truncatula clone mth2-16... 38 0.81
AC159448_18(AC159448|pid:none) Trypanosoma brucei chromosome 8 c... 38 0.81
EF536375_9(EF536375|pid:none) Tilletia walkeri strain TJ23 mitoc... 38 0.81
AJ308032_1(AJ308032|pid:none) Trypanosoma brucei brucei gene for... 38 0.81
AC159448_19(AC159448|pid:none) Trypanosoma brucei chromosome 8 c... 38 0.81
CP000423_2325(CP000423|pid:none) Lactobacillus casei ATCC 334, c... 38 0.81
CR382131_1156(CR382131|pid:none) Yarrowia lipolytica strain CLIB... 37 1.1
AE016816_235(AE016816|pid:none) Ashbya gossypii (= Eremothecium ... 37 1.1
AM502253_528(AM502253|pid:none) Leishmania infantum chromosome 35. 37 1.1
FM177140_2558(FM177140|pid:none) Lactobacillus casei BL23 comple... 37 1.1
(P34479) RecName: Full=Putative amino acid permease F59B2.2; &F... 37 1.4
AK029189_1(AK029189|pid:none) Mus musculus 0 day neonate head cD... 37 1.4
(O21004) RecName: Full=ATP synthase subunit a; AltName: Full=F-A... 37 1.8
CP000494_989(CP000494|pid:none) Bradyrhizobium sp. BTAi1, comple... 37 1.8
EF405800_1(EF405800|pid:none) Oryctolagus cuniculus solute carri... 37 1.8
EU954069_1(EU954069|pid:none) Zea mays clone 1453791 unknown mRNA. 36 2.3
AY086027_1(AY086027|pid:none) Arabidopsis thaliana clone 20725 m... 36 2.3
(Q6JWR2) RecName: Full=Putative sodium-coupled neutral amino aci... 36 2.3
FN392319_1030(FN392319|pid:none) Pichia pastoris GS115 chromosom... 36 2.3
DQ402428_1(DQ402428|pid:none) Leishmania donovani amino acid per... 36 2.3
CT005269_278(CT005269|pid:none) Leishmania major strain Friedlin... 36 2.3
T23307(T23307;T23377) hypothetical protein K04C1.6 - Caenorhabdi... 36 3.1
AM502250_317(AM502250|pid:none) Leishmania infantum chromosome 32. 36 3.1
(Q5E9S9) RecName: Full=Sodium-coupled neutral amino acid transpo... 36 3.1
DQ402427_1(DQ402427|pid:none) Leishmania donovani amino acid per... 36 3.1
CP000721_656(CP000721|pid:none) Clostridium beijerinckii NCIMB 8... 36 3.1
CU928174_423(CU928174|pid:none) Zygosaccharomyces rouxii strain ... 36 3.1
CP000503_685(CP000503|pid:none) Shewanella sp. W3-18-1, complete... 36 3.1
BC119859_1(BC119859|pid:none) Bos taurus solute carrier family 3... 36 3.1
FM992693_385(FM992693|pid:none) Candida dubliniensis CD36 chromo... 36 3.1
BX511264_1(BX511264|pid:none) Zebrafish DNA sequence from clone ... 35 4.0
AY099685_1(AY099685|pid:none) Arabidopsis thaliana amino acid pe... 35 4.0
CP000498_212(CP000498|pid:none) Pichia stipitis CBS 6054 chromos... 35 4.0
AP007161_77(AP007161|pid:none) Aspergillus oryzae RIB40 genomic ... 35 4.0
AX061654_1(AX061654|pid:none) Sequence 59 from Patent WO0100806. 35 4.0
(Q9H2H9) RecName: Full=Sodium-coupled neutral amino acid transpo... 35 5.2
(A2VE31) RecName: Full=Sodium-coupled neutral amino acid transpo... 35 5.2
AC159448_21(AC159448|pid:none) Trypanosoma brucei chromosome 8 c... 35 5.2
CP000821_1806(CP000821|pid:none) Shewanella sediminis HAW-EB3, c... 35 5.2
AX375166_1(AX375166|pid:none) Sequence 1 from Patent WO0210196. 35 5.2
AK074797_1(AK074797|pid:none) Homo sapiens cDNA FLJ90316 fis, cl... 35 5.2
(Q5R443) RecName: Full=Sodium-coupled neutral amino acid transpo... 35 5.2
CP000361_185(CP000361|pid:none) Arcobacter butzleri RM4018, comp... 35 5.2
CT005261_22(CT005261|pid:none) Leishmania major strain Friedlin,... 35 5.2
BT021187_1(BT021187|pid:none) Bos taurus solute carrier family 3... 35 6.8
AP006852_23(AP006852|pid:none) Candida albicans genomic DNA, chr... 35 6.8
AM427686_3(AM427686|pid:none) Vitis vinifera contig VV78X055084.... 35 6.8
CP000644_1601(CP000644|pid:none) Aeromonas salmonicida subsp. sa... 35 6.8
Y09525_2(Y09525|pid:none) B.lanceolatum mitochondrial tRNA-Lys a... 35 6.8
CP000099_492(CP000099|pid:none) Methanosarcina barkeri str. Fusa... 35 6.8
BC105242_1(BC105242|pid:none) Bos taurus solute carrier family 3... 35 6.8
(Q6DFE7) RecName: Full=Putative sodium-coupled neutral amino aci... 35 6.8
CP000671_623(CP000671|pid:none) Haemophilus influenzae PittEE, c... 35 6.8
(Q8BWH0) RecName: Full=Putative sodium-coupled neutral amino aci... 34 8.9
CT005272_43(CT005272|pid:none) Leishmania major strain Friedlin,... 34 8.9
AJ558163_4(AJ558163|pid:none) Strongyloides stercoralis complete... 34 8.9
AB070263_9(AB070263|pid:none) Bombyx mandarina mitochondrial DNA... 34 8.9
T21000(T21000)hypothetical protein F15H10.4 - Caenorhabditis ele... 34 8.9
AC122169_6(AC122169|pid:none) Medicago truncatula clone mth2-9m5... 34 8.9
AM453395_1(AM453395|pid:none) Vitis vinifera contig VV78X189813.... 34 8.9
AK171137_1(AK171137|pid:none) Mus musculus NOD-derived CD11c +ve... 34 8.9
CP000269_226(CP000269|pid:none) Janthinobacterium sp. Marseille,... 34 8.9
(O47426) RecName: Full=ATP synthase subunit a; AltName: Full=F-A... 34 8.9
U78675_1(U78675|pid:none) Eulepetopsis vitrea cytochrome oxidase... 34 8.9

>BT033888_1(BT033888|pid:none) Zea mays full-length cDNA clone
ZM_BFc0124K14 mRNA, complete cds.
&BT054976_1(BT054976|pid:none)
Length = 428

Score = 96.7 bits (239), Expect = 1e-18
Identities = 92/329 (27%), Positives = 149/329 (45%), Gaps = 12/329 (3%)
Frame = +1

Query: 40 SYADIAQRAFGRVGELFVCFMNFLVTMSIC---VSYLILIGQNI-----DYFTKIGXIPM 195
+Y D+ R FG +G C LV +S V+YLI IGQN+ + G I
Sbjct: 104 TYGDLGDRCFGTIGR---CLTETLVLVSQAGGSVAYLIFIGQNLHSTFSQLMSPAGFI-- 158

Query: 196 IWIVLPFILLLTFLTDMKYLGFTSIFGALSLILAMFTIVIYGIKDNHVHPLSDYTF--DF 369
I+LP + L+F+ + L SIF + +LAM IVI HP S+ +
Sbjct: 159 FAILLPLQIALSFIRSLSSLSPFSIFADVCNVLAM-AIVIKEDLQLFDHPFSNRSAFNGL 217

Query: 370 KQIPLWFGNAAFFFCNHIVVIPVSHASGDNKRYPNVLNFAMIFITVINVAFAVLCYLYYN 549
+P FG A F F + + + + D +++ +VL+ A+ I + V F V YL Y
Sbjct: 218 WAVPFTFGVAVFCFEGFSMTLALEASMADRRKFRSVLSQAVAAIIAVYVCFGVCGYLAYG 277

Query: 550 FISGGIPSAIVDVLPNGIFANIVKVCVVLELSCSFPLIFAAGLNVVDSSIQIFHHHFNAF 729
+ I I LPN + VKV + + L+ +FP++ +V++ + + F
Sbjct: 278 EATKDI---ITLNLPNNWSSAAVKVGLCIALAFTFPVMMHPIHEIVETRFRS-NRCFRKL 333

Query: 730 PELDGSSVKTPFFSRNW-KFYLIRIVFCSMLAGIASAVTNFGNYTSLIGSLMLAVAGFVV 906
DG + W + R++ ++L +AS + FG++ S +GS M A+ FV+
Sbjct: 334 SHNDGGA--------EWIGLHASRVLVVAVLTVVASFIPFFGSFISFVGSTMCALLSFVL 385

Query: 907 PPLLSLRFFPQQAIPW-KVFHITITIFGI 990
P L L W +V I +FG+
Sbjct: 386 PALFHLSIVGSSIPLWRRVLDYGILLFGL 414

Lambda K H
0.318 0.134 0.401

Gapped
Lambda K H
0.267 0.0410 0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3236559
Number of Hits to DB: 1,835,976,130
Number of extensions: 38151238
Number of successful extensions: 110768
Number of sequences better than 10.0: 250
Number of HSP's gapped: 110568
Number of HSP's successfully gapped: 260
Length of query: 396
Length of database: 1,051,180,864
Length adjustment: 131
Effective length of query: 265
Effective length of database: 627,191,635
Effective search space: 166205783275
Effective search space used: 166205783275
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)

PSORT

psg: 0.75 gvh: 0.54 alm: 0.20 top: 0.53 tms: 0.60 mit: 0.27 mip: 0.00
nuc: 0.00 erl: 0.00 erm: 0.00 pox: 0.00 px2: 0.00 vac: 0.00 rnp: 0.00
act: 0.00 caa: 0.00 yqr: 0.00 tyr: 0.00 leu: 0.00 gpi: 0.00 myr: 0.00
dna: 0.00 rib: 0.00 bac: 0.00 m1a: 0.00 m1b: 0.00 m2 : 0.00 mNt: 0.00
m3a: 1.00 m3b: 0.00 m_ : 0.00

64.0 %: plasma membrane
28.0 %: endoplasmic reticulum
8.0 %: mitochondrial

>> prediction for Contig-U15254-1 is pla

VS (DIR, S) 0
VH (FL, L) 0
VF (FL, S) 0
AH (FL, L) 0
AF (FL, S) 0
SL (DIR, L) 1
SS (DIR, S) 4
SH (FL, L) 0
SF (FL, S) 0
CH (FL, L) 0
CF (FL, S) 0
FCL (DIR, L) 0
FC (DIR, S) 0
FC-IC (SUB) 0