Contig-U15254-1 |
Contig ID |
Contig-U15254-1 |
Contig update |
2004. 6.11 |
Contig sequence |
|
Gap |
no gap |
Contig length |
1190 |
Chromosome number (1..6, M) |
6 |
Chromosome length |
3595308 |
Start point |
2414136 |
End point |
2412947 |
Strand (PLUS/MINUS) |
MINUS |
Number of clones |
5 |
Number of EST |
6 |
Link to clone list |
U15254 |
List of clone(s) |
|
Translated Amino Acid sequence |
|
Translated Amino Acid sequence (All Frames) |
|
own update |
2004. 6.23 |
Homology vs CSM-cDNA |
|
dna update |
2009. 1.18 |
Homology vs DNA |
|
protein update |
2009. 7.15 |
Homology vs Protein |
Query= Contig-U15254-1 (Contig-U15254-1Q) /CSM_Contig/Contig-U15254-1Q.Seq.d (1190 letters)
Database: nrp_B 3,236,559 sequences; 1,051,180,864 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
BT033888_1(BT033888|pid:none) Zea mays full-length cDNA clone ZM... 97 1e-18 AC016795_19(AC016795|pid:none) Arabidopsis thaliana chromosome I... 96 3e-18 AP005774_15(AP005774|pid:none) Oryza sativa Japonica Group genom... 95 4e-18 AP008213_565(AP008213|pid:none) Oryza sativa (japonica cultivar-... 95 4e-18 AK096251_1(AK096251|pid:none) Homo sapiens cDNA FLJ38932 fis, cl... 86 2e-15 BC047374_1(BC047374|pid:none) Homo sapiens solute carrier family... 85 4e-15 AE014134_1553(AE014134|pid:none) Drosophila melanogaster chromos... 85 6e-15 AE014134_1551(AE014134|pid:none) Drosophila melanogaster chromos... 85 6e-15 AM920428_716(AM920428|pid:none) Penicillium chrysogenum Wisconsi... 85 6e-15 AE014134_1556(AE014134|pid:none) Drosophila melanogaster chromos... 85 6e-15 U39783_1(U39783|pid:none) Arabidopsis thaliana amino acid transp... 84 8e-15 BC166414_1(BC166414|pid:none) Rattus norvegicus solute carrier f... 84 8e-15 AK032074_1(AK032074|pid:none) Mus musculus adult male medulla ob... 84 1e-14 AY211262_1(AY211262|pid:none) Mus musculus amino acid transport ... 83 2e-14 (Q8K4D3) RecName: Full=Proton-coupled amino acid transporter 1; ... 83 2e-14 (Q8K415) RecName: Full=Proton-coupled amino acid transporter 2; ... 82 3e-14 AL513466_15(AL513466|pid:none) Neurospora crassa DNA linkage gro... 82 4e-14 AL035539_2(AL035539|pid:none) Arabidopsis thaliana DNA chromosom... 81 6e-14 AB168788_1(AB168788|pid:none) Macaca fascicularis testis cDNA, c... 80 1e-13 AM393725_1(AM393725|pid:none) Synthetic construct Homo sapiens c... 80 2e-13 (Q8BHK3) RecName: Full=Proton-coupled amino acid transporter 2; ... 80 2e-13 BT037407_1(BT037407|pid:none) Zea mays full-length cDNA clone ZM... 79 3e-13 (Q924A5) RecName: Full=Proton-coupled amino acid transporter 1; ... 79 3e-13 BC101102_1(BC101102|pid:none) Homo sapiens solute carrier family... 79 4e-13 AB011474_5(AB011474|pid:none) Arabidopsis thaliana genomic DNA, ... 77 1e-12 BT011236_1(BT011236|pid:none) Arabidopsis thaliana At5g65990 gen... 77 1e-12 AE014298_2637(AE014298|pid:none) Drosophila melanogaster chromos... 77 1e-12 DQ115393_2(DQ115393|pid:none) Saccharomyces cerevisiae Pol1p (PO... 77 2e-12 AY162214_1(AY162214|pid:none) Homo sapiens proton/amino acid tra... 77 2e-12 BT037234_1(BT037234|pid:none) Zea mays full-length cDNA clone ZM... 76 2e-12 AY050801_1(AY050801|pid:none) Arabidopsis thaliana unknown prote... 75 5e-12 AF516142_1(AF516142|pid:none) Homo sapiens proton-coupled amino ... 74 8e-12 CU928174_402(CU928174|pid:none) Zygosaccharomyces rouxii strain ... 74 1e-11 AM471155_1(AM471155|pid:none) Vitis vinifera contig VV78X080581.... 74 1e-11 BT068131_1(BT068131|pid:none) Zea mays full-length cDNA clone ZM... 74 1e-11 BT000792_1(BT000792|pid:none) Arabidopsis thaliana clone RAFL05-... 72 3e-11 AC004261_3(AC004261|pid:none) Arabidopsis thaliana chromosome 2 ... 72 3e-11 BT061845_1(BT061845|pid:none) Zea mays full-length cDNA clone ZM... 72 3e-11 S42372(S42372)hypothetical protein T20G5.6 - Caenorhabditis eleg... 72 3e-11 E84813(E84813)hypothetical protein At2g39130 [imported] - Arabid... 72 3e-11 (P34579) RecName: Full=Vesicular GABA transporter; AltName: Full... 72 3e-11 AY989816_1(AY989816|pid:none) Oryctolagus cuniculus proton/amino... 72 5e-11 AY102114_1(AY102114|pid:none) Arabidopsis thaliana AT5g02170/T7H... 70 1e-10 EU963484_1(EU963484|pid:none) Zea mays clone 263136 amino acid t... 70 1e-10 AY094740_1(AY094740|pid:none) Drosophila melanogaster GM01221 fu... 70 1e-10 AL353993_13(AL353993|pid:none) Arabidopsis thaliana DNA chromoso... 70 1e-10 AE014296_1998(AE014296|pid:none) Drosophila melanogaster chromos... 70 1e-10 BT042853_1(BT042853|pid:none) Zea mays full-length cDNA clone ZM... 70 1e-10 BT036860_1(BT036860|pid:none) Zea mays full-length cDNA clone ZM... 70 1e-10 CR855141_8(CR855141|pid:none) Oryza sativa (indica cultivar-grou... 69 3e-10 CR954216_301(CR954216|pid:none) Ostreococcus tauri strain OTTH05... 68 7e-10 AK106202_1(AK106202|pid:none) Oryza sativa Japonica Group cDNA c... 67 1e-09 CR855169_12(CR855169|pid:none) Oryza sativa (indica cultivar-gro... 67 1e-09 AP003504_2(AP003504|pid:none) Oryza sativa Japonica Group genomi... 67 1e-09 AE017344_605(AE017344|pid:none) Cryptococcus neoformans var. neo... 67 1e-09 CR382125_601(CR382125|pid:none) Kluyveromyces lactis strain NRRL... 67 2e-09 AK107472_1(AK107472|pid:none) Oryza sativa Japonica Group cDNA c... 66 2e-09 AJ295983_1(AJ295983|pid:none) Homo sapiens mRNA for hypothetical... 66 2e-09 (Q4V8B1) RecName: Full=Proton-coupled amino acid transporter 3; ... 66 2e-09 AB025615_9(AB025615|pid:none) Arabidopsis thaliana genomic DNA, ... 66 2e-09 AP003333_32(AP003333|pid:none) Oryza sativa Japonica Group genom... 66 3e-09 AC149128_5(AC149128|pid:none) Medicago truncatula chromosome 7 c... 65 5e-09 AM471155_2(AM471155|pid:none) Vitis vinifera contig VV78X080581.... 65 5e-09 AM488068_1(AM488068|pid:none) Vitis vinifera contig VV78X124178.... 65 6e-09 AF453745_1(AF453745|pid:none) Mus musculus proton/amino acid tra... 64 8e-09 (Q8IZM9) RecName: Full=Probable sodium-coupled neutral amino aci... 62 4e-08 CP000595_254(CP000595|pid:none) Ostreococcus lucimarinus CCE9901... 62 4e-08 AY227111_1(AY227111|pid:none) Homo sapiens clone IMAGE:2549054 t... 61 7e-08 AE014296_2000(AE014296|pid:none) Drosophila melanogaster chromos... 61 7e-08 AC146631_3(AC146631|pid:none) Medicago truncatula clone mth2-7g1... 61 9e-08 AL162508_22(AL162508|pid:none) Arabidopsis thaliana DNA chromoso... 60 2e-07 AF025468_4(AF025468|pid:none) Caenorhabditis elegans cosmid T27A... 60 2e-07 AK303839_1(AK303839|pid:none) Homo sapiens cDNA FLJ56844 complet... 59 3e-07 BT067469_1(BT067469|pid:none) Zea mays full-length cDNA clone ZM... 58 6e-07 EU956591_1(EU956591|pid:none) Zea mays clone 1567488 amino acid ... 58 6e-07 (Q495N2) RecName: Full=Proton-coupled amino acid transporter 3; ... 58 8e-07 AK127978_1(AK127978|pid:none) Homo sapiens cDNA FLJ46093 fis, cl... 58 8e-07 AC135927_6(AC135927|pid:none) Oryza sativa (japonica cultivar-gr... 57 1e-06 BT066836_1(BT066836|pid:none) Zea mays full-length cDNA clone ZM... 57 1e-06 AK131483_1(AK131483|pid:none) Homo sapiens cDNA FLJ16658 fis, cl... 57 1e-06 BC101092_1(BC101092|pid:none) Homo sapiens solute carrier family... 57 1e-06 FN392321_303(FN392321|pid:none) Pichia pastoris GS115 chromosome... 57 1e-06 AK074023_1(AK074023|pid:none) Oryza sativa Japonica Group cDNA c... 57 2e-06 CR382136_735(CR382136|pid:none) Debaryomyces hansenii strain CBS... 57 2e-06 AE014296_422(AE014296|pid:none) Drosophila melanogaster chromoso... 56 2e-06 AY119064_1(AY119064|pid:none) Drosophila melanogaster LP07767 fu... 56 3e-06 AY089387_1(AY089387|pid:none) Drosophila melanogaster AT21186 fu... 55 5e-06 (P39981) RecName: Full=Vacuolar amino acid transporter 2; &S505... 55 6e-06 BC157917_1(BC157917|pid:none) Mus musculus solute carrier family... 55 6e-06 CP000499_467(CP000499|pid:none) Pichia stipitis CBS 6054 chromos... 55 6e-06 BT036233_1(BT036233|pid:none) Zea mays full-length cDNA clone ZM... 54 8e-06 AC011436_19(AC011436|pid:none) Arabidopsis thaliana chromosome I... 54 8e-06 AL021481_6(AL021481|pid:none) Caenorhabditis elegans YAC Y43F4B,... 54 1e-05 BC155884_1(BC155884|pid:none) Xenopus laevis hypothetical protei... 54 1e-05 CP001323_852(CP001323|pid:none) Micromonas sp. RCC299 chromosome... 54 1e-05 AC011436_18(AC011436|pid:none) Arabidopsis thaliana chromosome I... 53 2e-05 AE016819_905(AE016819|pid:none) Ashbya gossypii (= Eremothecium ... 53 2e-05 EF624240_1(EF624240|pid:none) Humulus lupulus amino acid-polyami... 53 2e-05 BC151987_1(BC151987|pid:none) Danio rerio im:6896251, mRNA (cDNA... 53 2e-05 AL606460_6(AL606460|pid:none) Oryza sativa genomic DNA, chromoso... 52 3e-05 AC004697_23(AC004697|pid:none) Arabidopsis thaliana chromosome 2... 52 3e-05 (Q6WWW3) RecName: Full=Probable sodium-coupled neutral amino aci... 52 5e-05 CR382124_402(CR382124|pid:none) Kluyveromyces lactis strain NRRL... 51 7e-05 AL442110_7(AL442110|pid:none) Oryza sativa genomic DNA, chromoso... 51 9e-05 T16658(T16658) hypothetical protein R02F2.8 - Caenorhabditis ele... 51 9e-05 (P36062) RecName: Full=Vacuolar amino acid transporter 3; &S379... 51 9e-05 AJ457193_1(AJ457193|pid:none) Acyrthosiphon pisum mRNA for putat... 50 1e-04 AF125971_5(AF125971|pid:none) Caenorhabditis elegans cosmid Y4C6... 50 1e-04 AM454394_3(AM454394|pid:none) Vitis vinifera contig VV78X133763.... 50 2e-04 (Q28HE5) RecName: Full=Probable sodium-coupled neutral amino aci... 50 2e-04 CP000586_360(CP000586|pid:none) Ostreococcus lucimarinus CCE9901... 50 2e-04 CR382137_559(CR382137|pid:none) Debaryomyces hansenii strain CBS... 49 3e-04 CR382133_408(CR382133|pid:none) Debaryomyces hansenii strain CBS... 48 6e-04 FN314832_1(FN314832|pid:none) Schistosoma japonicum isolate Anhu... 48 6e-04 AM920435_70(AM920435|pid:none) Penicillium chrysogenum Wisconsin... 48 8e-04 AC073555_18(AC073555|pid:none) Arabidopsis thaliana chromosome 1... 47 0.001 CR380948_188(CR380948|pid:none) Candida glabrata strain CBS138 c... 47 0.001 AC122169_3(AC122169|pid:none) Medicago truncatula clone mth2-9m5... 47 0.001 AL590451_118(AL590451|pid:none) chromosome IX of strain GB-M1 of... 47 0.001 AE013599_1244(AE013599|pid:none) Drosophila melanogaster chromos... 46 0.002 (Q6PCF9) RecName: Full=Putative sodium-coupled neutral amino aci... 46 0.002 AM989980_85(AM989980|pid:none) Zygosaccharomyces rouxii strain C... 46 0.003 AK228702_1(AK228702|pid:none) Arabidopsis thaliana mRNA for hypo... 46 0.003 EF676242_1(EF676242|pid:none) Picea sitchensis clone WS02723_J06... 46 0.003 CR382123_97(CR382123|pid:none) Kluyveromyces lactis strain NRRL ... 45 0.004 AM270318_18(AM270318|pid:none) Aspergillus niger contig An14c011... 45 0.004 AP007150_585(AP007150|pid:none) Aspergillus oryzae RIB40 genomic... 45 0.005 BT087536_1(BT087536|pid:none) Zea mays full-length cDNA clone ZM... 45 0.005 AC007020_21(AC007020|pid:none) Arabidopsis thaliana chromosome 2... 45 0.007 AM920437_3(AM920437|pid:none) Penicillium chrysogenum Wisconsin ... 45 0.007 AC122169_2(AC122169|pid:none) Medicago truncatula clone mth2-9m5... 44 0.009 AM920427_87(AM920427|pid:none) Penicillium chrysogenum Wisconsin... 44 0.009 BC155885_1(BC155885|pid:none) Xenopus laevis hypothetical protei... 44 0.011 CR859927_1(CR859927|pid:none) Pongo abelii mRNA; cDNA DKFZp469P1... 44 0.011 AY526248_1(AY526248|pid:none) Trypanosoma cruzi putative amino a... 44 0.011 AL021474_2(AL021474|pid:none) Caenorhabditis elegans YAC Y32F6A,... 44 0.015 (Q5XH90) RecName: Full=Sodium-coupled neutral amino acid transpo... 43 0.019 (P40501) RecName: Full=Vacuolar amino acid transporter 7; &S497... 43 0.025 AE013599_781(AE013599|pid:none) Drosophila melanogaster chromoso... 43 0.025 BC153282_1(BC153282|pid:none) Bos taurus solute carrier family 3... 43 0.025 CR382132_1226(CR382132|pid:none) Yarrowia lipolytica strain CLIB... 42 0.033 AK007977_1(AK007977|pid:none) Mus musculus 10 day old male pancr... 42 0.043 BC082300_1(BC082300|pid:none) Mus musculus solute carrier family... 42 0.043 AE017346_144(AE017346|pid:none) Cryptococcus neoformans var. neo... 42 0.043 AK032245_1(AK032245|pid:none) Mus musculus adult male olfactory ... 42 0.043 (Q5I012) RecName: Full=Putative sodium-coupled neutral amino aci... 42 0.043 BC088811_1(BC088811|pid:none) Mus musculus solute carrier family... 42 0.043 AE016817_196(AE016817|pid:none) Ashbya gossypii (= Eremothecium ... 42 0.043 AK077667_1(AK077667|pid:none) Mus musculus 8 days embryo whole b... 42 0.056 FN319718_1(FN319718|pid:none) Schistosoma japonicum isolate Anhu... 42 0.056 (Q3U1J0) RecName: Full=Sodium-coupled neutral amino acid transpo... 42 0.056 AP003984_2(AP003984|pid:none) Oryza sativa Japonica Group genomi... 41 0.073 AF276870_1(AF276870|pid:none) Rattus norvegicus amino acid trans... 41 0.095 (A2VCW5) RecName: Full=Sodium-coupled neutral amino acid transpo... 41 0.095 AK054485_1(AK054485|pid:none) Mus musculus 2 days pregnant adult... 41 0.095 AE016816_256(AE016816|pid:none) Ashbya gossypii (= Eremothecium ... 41 0.095 AM920437_1808(AM920437|pid:none) Penicillium chrysogenum Wiscons... 40 0.12 CP000497_133(CP000497|pid:none) Pichia stipitis CBS 6054 chromos... 40 0.12 AY228364_1(AY228364|pid:none) Homo sapiens truncated SLC36A2 pro... 40 0.12 DQ465378_1(DQ465378|pid:none) Oreochromis mossambicus clone SSH ... 40 0.16 (Q9HBR0) RecName: Full=Putative sodium-coupled neutral amino aci... 40 0.16 CU633900_755(CU633900|pid:none) Podospora anserina genomic DNA c... 40 0.21 AP007175_445(AP007175|pid:none) Aspergillus oryzae RIB40 genomic... 40 0.21 CU633454_13(CU633454|pid:none) Podospora anserina genomic DNA ch... 40 0.21 FM992689_299(FM992689|pid:none) Candida dubliniensis CD36 chromo... 40 0.21 AY526245_1(AY526245|pid:none) Trypanosoma cruzi putative amino a... 40 0.21 AY259515_1(AY259515|pid:none) Leishmania donovani amino acid per... 39 0.28 AM270057_33(AM270057|pid:none) Aspergillus niger contig An03c016... 39 0.28 FM992690_510(FM992690|pid:none) Candida dubliniensis CD36 chromo... 39 0.28 BT058890_1(BT058890|pid:none) Salmo salar clone ssal-rgf-511-195... 39 0.28 AM270094_32(AM270094|pid:none) Aspergillus niger contig An04c033... 39 0.28 AB011477_1(AB011477|pid:none) Arabidopsis thaliana genomic DNA, ... 39 0.28 AK070297_1(AK070297|pid:none) Oryza sativa Japonica Group cDNA c... 39 0.28 AM920436_1683(AM920436|pid:none) Penicillium chrysogenum Wiscons... 39 0.36 CP001098_11(CP001098|pid:none) Halothermothrix orenii H 168, com... 39 0.36 BC027721_1(BC027721|pid:none) Homo sapiens solute carrier family... 39 0.47 CU928169_326(CU928169|pid:none) Kluyveromyces thermotolerans str... 39 0.47 CP001087_2641(CP001087|pid:none) Desulfobacterium autotrophicum ... 39 0.47 AM494970_169(AM494970|pid:none) Leishmania braziliensis chromoso... 39 0.47 AJ575144_1(AJ575144|pid:none) Sordaria macrospora partial smu623... 39 0.47 (Q8WUX1) RecName: Full=Sodium-coupled neutral amino acid transpo... 39 0.47 CP000866_118(CP000866|pid:none) Nitrosopumilus maritimus SCM1, c... 39 0.47 CR954206_388(CR954206|pid:none) Ostreococcus tauri strain OTTH05... 38 0.62 DQ993184_9(DQ993184|pid:none) Tilletia indica strain F11 mitocho... 38 0.81 (Q9JM15) RecName: Full=Sodium-coupled neutral amino acid transpo... 38 0.81 FN364590_1(FN364590|pid:none) Schistosoma mansoni genome sequenc... 38 0.81 AC151725_24(AC151725|pid:none) Medicago truncatula clone mth2-16... 38 0.81 AC159448_18(AC159448|pid:none) Trypanosoma brucei chromosome 8 c... 38 0.81 EF536375_9(EF536375|pid:none) Tilletia walkeri strain TJ23 mitoc... 38 0.81 AJ308032_1(AJ308032|pid:none) Trypanosoma brucei brucei gene for... 38 0.81 AC159448_19(AC159448|pid:none) Trypanosoma brucei chromosome 8 c... 38 0.81 CP000423_2325(CP000423|pid:none) Lactobacillus casei ATCC 334, c... 38 0.81 CR382131_1156(CR382131|pid:none) Yarrowia lipolytica strain CLIB... 37 1.1 AE016816_235(AE016816|pid:none) Ashbya gossypii (= Eremothecium ... 37 1.1 AM502253_528(AM502253|pid:none) Leishmania infantum chromosome 35. 37 1.1 FM177140_2558(FM177140|pid:none) Lactobacillus casei BL23 comple... 37 1.1 (P34479) RecName: Full=Putative amino acid permease F59B2.2; &F... 37 1.4 AK029189_1(AK029189|pid:none) Mus musculus 0 day neonate head cD... 37 1.4 (O21004) RecName: Full=ATP synthase subunit a; AltName: Full=F-A... 37 1.8 CP000494_989(CP000494|pid:none) Bradyrhizobium sp. BTAi1, comple... 37 1.8 EF405800_1(EF405800|pid:none) Oryctolagus cuniculus solute carri... 37 1.8 EU954069_1(EU954069|pid:none) Zea mays clone 1453791 unknown mRNA. 36 2.3 AY086027_1(AY086027|pid:none) Arabidopsis thaliana clone 20725 m... 36 2.3 (Q6JWR2) RecName: Full=Putative sodium-coupled neutral amino aci... 36 2.3 FN392319_1030(FN392319|pid:none) Pichia pastoris GS115 chromosom... 36 2.3 DQ402428_1(DQ402428|pid:none) Leishmania donovani amino acid per... 36 2.3 CT005269_278(CT005269|pid:none) Leishmania major strain Friedlin... 36 2.3 T23307(T23307;T23377) hypothetical protein K04C1.6 - Caenorhabdi... 36 3.1 AM502250_317(AM502250|pid:none) Leishmania infantum chromosome 32. 36 3.1 (Q5E9S9) RecName: Full=Sodium-coupled neutral amino acid transpo... 36 3.1 DQ402427_1(DQ402427|pid:none) Leishmania donovani amino acid per... 36 3.1 CP000721_656(CP000721|pid:none) Clostridium beijerinckii NCIMB 8... 36 3.1 CU928174_423(CU928174|pid:none) Zygosaccharomyces rouxii strain ... 36 3.1 CP000503_685(CP000503|pid:none) Shewanella sp. W3-18-1, complete... 36 3.1 BC119859_1(BC119859|pid:none) Bos taurus solute carrier family 3... 36 3.1 FM992693_385(FM992693|pid:none) Candida dubliniensis CD36 chromo... 36 3.1 BX511264_1(BX511264|pid:none) Zebrafish DNA sequence from clone ... 35 4.0 AY099685_1(AY099685|pid:none) Arabidopsis thaliana amino acid pe... 35 4.0 CP000498_212(CP000498|pid:none) Pichia stipitis CBS 6054 chromos... 35 4.0 AP007161_77(AP007161|pid:none) Aspergillus oryzae RIB40 genomic ... 35 4.0 AX061654_1(AX061654|pid:none) Sequence 59 from Patent WO0100806. 35 4.0 (Q9H2H9) RecName: Full=Sodium-coupled neutral amino acid transpo... 35 5.2 (A2VE31) RecName: Full=Sodium-coupled neutral amino acid transpo... 35 5.2 AC159448_21(AC159448|pid:none) Trypanosoma brucei chromosome 8 c... 35 5.2 CP000821_1806(CP000821|pid:none) Shewanella sediminis HAW-EB3, c... 35 5.2 AX375166_1(AX375166|pid:none) Sequence 1 from Patent WO0210196. 35 5.2 AK074797_1(AK074797|pid:none) Homo sapiens cDNA FLJ90316 fis, cl... 35 5.2 (Q5R443) RecName: Full=Sodium-coupled neutral amino acid transpo... 35 5.2 CP000361_185(CP000361|pid:none) Arcobacter butzleri RM4018, comp... 35 5.2 CT005261_22(CT005261|pid:none) Leishmania major strain Friedlin,... 35 5.2 BT021187_1(BT021187|pid:none) Bos taurus solute carrier family 3... 35 6.8 AP006852_23(AP006852|pid:none) Candida albicans genomic DNA, chr... 35 6.8 AM427686_3(AM427686|pid:none) Vitis vinifera contig VV78X055084.... 35 6.8 CP000644_1601(CP000644|pid:none) Aeromonas salmonicida subsp. sa... 35 6.8 Y09525_2(Y09525|pid:none) B.lanceolatum mitochondrial tRNA-Lys a... 35 6.8 CP000099_492(CP000099|pid:none) Methanosarcina barkeri str. Fusa... 35 6.8 BC105242_1(BC105242|pid:none) Bos taurus solute carrier family 3... 35 6.8 (Q6DFE7) RecName: Full=Putative sodium-coupled neutral amino aci... 35 6.8 CP000671_623(CP000671|pid:none) Haemophilus influenzae PittEE, c... 35 6.8 (Q8BWH0) RecName: Full=Putative sodium-coupled neutral amino aci... 34 8.9 CT005272_43(CT005272|pid:none) Leishmania major strain Friedlin,... 34 8.9 AJ558163_4(AJ558163|pid:none) Strongyloides stercoralis complete... 34 8.9 AB070263_9(AB070263|pid:none) Bombyx mandarina mitochondrial DNA... 34 8.9 T21000(T21000)hypothetical protein F15H10.4 - Caenorhabditis ele... 34 8.9 AC122169_6(AC122169|pid:none) Medicago truncatula clone mth2-9m5... 34 8.9 AM453395_1(AM453395|pid:none) Vitis vinifera contig VV78X189813.... 34 8.9 AK171137_1(AK171137|pid:none) Mus musculus NOD-derived CD11c +ve... 34 8.9 CP000269_226(CP000269|pid:none) Janthinobacterium sp. Marseille,... 34 8.9 (O47426) RecName: Full=ATP synthase subunit a; AltName: Full=F-A... 34 8.9 U78675_1(U78675|pid:none) Eulepetopsis vitrea cytochrome oxidase... 34 8.9
>BT033888_1(BT033888|pid:none) Zea mays full-length cDNA clone ZM_BFc0124K14 mRNA, complete cds. &BT054976_1(BT054976|pid:none) Length = 428
Score = 96.7 bits (239), Expect = 1e-18 Identities = 92/329 (27%), Positives = 149/329 (45%), Gaps = 12/329 (3%) Frame = +1
Query: 40 SYADIAQRAFGRVGELFVCFMNFLVTMSIC---VSYLILIGQNI-----DYFTKIGXIPM 195 +Y D+ R FG +G C LV +S V+YLI IGQN+ + G I Sbjct: 104 TYGDLGDRCFGTIGR---CLTETLVLVSQAGGSVAYLIFIGQNLHSTFSQLMSPAGFI-- 158
Query: 196 IWIVLPFILLLTFLTDMKYLGFTSIFGALSLILAMFTIVIYGIKDNHVHPLSDYTF--DF 369 I+LP + L+F+ + L SIF + +LAM IVI HP S+ + Sbjct: 159 FAILLPLQIALSFIRSLSSLSPFSIFADVCNVLAM-AIVIKEDLQLFDHPFSNRSAFNGL 217
Query: 370 KQIPLWFGNAAFFFCNHIVVIPVSHASGDNKRYPNVLNFAMIFITVINVAFAVLCYLYYN 549 +P FG A F F + + + + D +++ +VL+ A+ I + V F V YL Y Sbjct: 218 WAVPFTFGVAVFCFEGFSMTLALEASMADRRKFRSVLSQAVAAIIAVYVCFGVCGYLAYG 277
Query: 550 FISGGIPSAIVDVLPNGIFANIVKVCVVLELSCSFPLIFAAGLNVVDSSIQIFHHHFNAF 729 + I I LPN + VKV + + L+ +FP++ +V++ + + F Sbjct: 278 EATKDI---ITLNLPNNWSSAAVKVGLCIALAFTFPVMMHPIHEIVETRFRS-NRCFRKL 333
Query: 730 PELDGSSVKTPFFSRNW-KFYLIRIVFCSMLAGIASAVTNFGNYTSLIGSLMLAVAGFVV 906 DG + W + R++ ++L +AS + FG++ S +GS M A+ FV+ Sbjct: 334 SHNDGGA--------EWIGLHASRVLVVAVLTVVASFIPFFGSFISFVGSTMCALLSFVL 385
Query: 907 PPLLSLRFFPQQAIPW-KVFHITITIFGI 990 P L L W +V I +FG+ Sbjct: 386 PALFHLSIVGSSIPLWRRVLDYGILLFGL 414
Lambda K H 0.318 0.134 0.401
Gapped Lambda K H 0.267 0.0410 0.140
Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 3236559 Number of Hits to DB: 1,835,976,130 Number of extensions: 38151238 Number of successful extensions: 110768 Number of sequences better than 10.0: 250 Number of HSP's gapped: 110568 Number of HSP's successfully gapped: 260 Length of query: 396 Length of database: 1,051,180,864 Length adjustment: 131 Effective length of query: 265 Effective length of database: 627,191,635 Effective search space: 166205783275 Effective search space used: 166205783275 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 32 (16.9 bits)
|
PSORT |
|
VS (DIR, S) |
0 |
VH (FL, L) |
0 |
VF (FL, S) |
0 |
AH (FL, L) |
0 |
AF (FL, S) |
0 |
SL (DIR, L) |
1 |
SS (DIR, S) |
4 |
SH (FL, L) |
0 |
SF (FL, S) |
0 |
CH (FL, L) |
0 |
CF (FL, S) |
0 |
FCL (DIR, L) |
0 |
FC (DIR, S) |
0 |
FC-IC (SUB) |
0 |