| Contig-U15242-1 |
| Contig ID |
Contig-U15242-1 |
| Contig update |
2004. 6.11 |
| Contig sequence |
 |
| Gap |
no gap |
| Contig length |
1880 |
| Chromosome number (1..6, M) |
1 |
| Chromosome length |
4919822 |
| Start point |
762286 |
| End point |
760839 |
| Strand (PLUS/MINUS) |
MINUS |
| Number of clones |
5 |
| Number of EST |
11 |
| Link to clone list |
U15242 |
| List of clone(s) |
|
| Translated Amino Acid sequence |
|
| Translated Amino Acid sequence (All Frames) |
|
| own update |
2004. 6.23 |
| Homology vs CSM-cDNA |
|
| dna update |
2009. 1.17 |
| Homology vs DNA |
Query= Contig-U15242-1 (Contig-U15242-1Q) /CSM_Contig/Contig-U15242-1Q.Seq.d
(1880 letters)
Database: ddbj_B
98,226,423 sequences; 98,766,808,389 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value N
(BJ432310) Dictyostelium discoideum cDNA clone:ddv18f12, 3' ... 741 0.0 2
(BJ398437) Dictyostelium discoideum cDNA clone:dds12o09, 3' ... 712 0.0 3
(BJ400409) Dictyostelium discoideum cDNA clone:dds13l06, 3' ... 670 0.0 3
(BJ431541) Dictyostelium discoideum cDNA clone:ddv14e15, 3' ... 698 0.0 2
(BJ414178) Dictyostelium discoideum cDNA clone:ddv18f12, 5' ... 375 0.0 4
(BJ387123) Dictyostelium discoideum cDNA clone:dds12o09, 5' ... 375 0.0 5
(BJ413192) Dictyostelium discoideum cDNA clone:ddv14e15, 5' ... 375 0.0 4
(BJ429989) Dictyostelium discoideum cDNA clone:ddv5l16, 3' e... 349 0.0 3
(BJ391312) Dictyostelium discoideum cDNA clone:dds13l06, 5' ... 396 0.0 2
(BJ411749) Dictyostelium discoideum cDNA clone:ddv5l16, 5' e... 349 0.0 3
(AC116305) Dictyostelium discoideum chromosome 2 map 1005175... 38 4e-08 23
(AP009180) Candidatus Carsonella ruddii PV DNA, complete gen... 36 8e-08 17
(CP000721) Clostridium beijerinckii NCIMB 8052, complete gen... 38 2e-07 24
(AC116957) Dictyostelium discoideum chromosome 2 map 1685067... 38 5e-07 19
(AE017308) Mycoplasma mobile 163K complete genome. 42 6e-06 19
(AC116984) Dictyostelium discoideum chromosome 2 map 2567470... 36 2e-05 23
(AC116956) Dictyostelium discoideum chromosome 2 map 1418423... 32 6e-05 21
(CP000123) Mycoplasma capricolum subsp. capricolum ATCC 2734... 36 6e-05 21
(DD010735) Diagnosis of known genetic Parameters within the ... 36 3e-04 19
(BA000026) Mycoplasma penetrans HF-2 DNA, complete genome. 40 3e-04 19
(BX248583) Blochmannia floridanus complete genome. 38 4e-04 22
(FB571381) Sequence 248 from Patent EP1865317. 34 5e-04 18
(CU469464) Candidatus Phytoplasma mali strain AT complete ch... 40 5e-04 18
(CP000253) Staphylococcus aureus subsp. aureus NCTC 8325, co... 40 8e-04 21
(CP000942) Ureaplasma parvum serovar 3 str. ATCC 27815, comp... 36 9e-04 21
(BX293980) Mycoplasma mycoides subsp. mycoides SC str. PG1, ... 36 0.002 19
(AC005506) Plasmodium falciparum chromosome 12 clone PFYAC35... 46 0.002 12
(CP000046) Staphylococcus aureus subsp. aureus COL, complete... 38 0.002 20
(AX344560) Sequence 11 from Patent WO0200932. 36 0.002 15
(CP000263) Buchnera aphidicola str. Cc (Cinara cedri), compl... 36 0.002 17
(AL031745) Plasmodium falciparum DNA from MAL1P2. 36 0.002 16
(BJ327384) Dictyostelium discoideum cDNA clone:dda20a12, 5' ... 34 0.002 4
(AX347077) Sequence 2148 from Patent WO0200928. 32 0.002 12
(CP000361) Arcobacter butzleri RM4018, complete genome. 40 0.003 20
(BJ329359) Dictyostelium discoideum cDNA clone:dda24o15, 5' ... 38 0.003 3
(AC117075) Dictyostelium discoideum chromosome 2 map 5201047... 36 0.004 16
(CP001056) Clostridium botulinum B str. Eklund 17B, complete... 40 0.004 20
(AF019980) Dictyostelium discoideum ZipA (zipA) gene, partia... 38 0.005 4
(CP000730) Staphylococcus aureus subsp. aureus USA300_TCH151... 40 0.005 20
(FH238814) CHO_OF3445xe06r1.ab1 CHO_OF3 Nicotiana tabacum ge... 32 0.006 5
(CR940352) Theileria annulata genomic DNA chromosome 3. 42 0.006 22
(AC116963) Dictyostelium discoideum chromosome 2 map 4657875... 40 0.007 18
(AM180355) Clostridium difficile 630 complete genome. 36 0.007 22
(DD010736) Diagnosis of known genetic Parameters within the ... 36 0.007 20
(CP000728) Clostridium botulinum F str. Langeland, complete ... 38 0.009 23
(AX344566) Sequence 17 from Patent WO0200932. 34 0.009 20
(CS468878) Sequence 69 from Patent EP1748080. 34 0.009 18
(CS419355) Sequence 69 from Patent WO2006094836. 34 0.009 18
(AP006628) Onion yellows phytoplasma OY-M DNA, complete genome. 36 0.010 20
(CP000552) Prochlorococcus marinus str. MIT 9515, complete g... 32 0.011 24
(AL929352) Plasmodium falciparum strain 3D7, chromosome 5, s... 34 0.012 17
(AX344569) Sequence 20 from Patent WO0200932. 36 0.012 19
(AX344506) Sequence 353 from Patent WO0200926. 34 0.012 8
(BA000021) Wigglesworthia glossinidia endosymbiont of Glossi... 34 0.013 20
(AE014816) Plasmodium falciparum 3D7 chromosome 14 section 1... 32 0.013 18
(AE009951) Fusobacterium nucleatum subsp. nucleatum ATCC 255... 36 0.013 23
(AP009351) Staphylococcus aureus subsp. aureus str. Newman D... 40 0.014 20
(CS468864) Sequence 55 from Patent EP1748080. 34 0.015 15
(CS468863) Sequence 54 from Patent EP1748080. 34 0.015 15
(CS419341) Sequence 55 from Patent WO2006094836. 34 0.015 15
(CS419340) Sequence 54 from Patent WO2006094836. 34 0.015 15
(CP000102) Methanosphaera stadtmanae DSM 3091, complete genome. 44 0.023 18
(CP000255) Staphylococcus aureus subsp. aureus USA300_FPR375... 40 0.028 19
(AE014831) Plasmodium falciparum 3D7 chromosome 10 section 3... 34 0.029 14
(BX571857) Staphylococcus aureus strain MSSA476, complete ge... 36 0.029 21
(AC116979) Dictyostelium discoideum chromosome 2 map 6445720... 34 0.030 20
(AX344564) Sequence 15 from Patent WO0200932. 32 0.031 19
(CS468877) Sequence 68 from Patent EP1748080. 34 0.035 17
(CS419354) Sequence 68 from Patent WO2006094836. 34 0.035 17
(AC012393) Arabidopsis thaliana chromosome III BAC F10A16 ge... 34 0.038 8
(EK390743) 1095469501335 Global-Ocean-Sampling_GS-31-01-01-1... 42 0.040 3
(FP067444) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 38 0.042 10
(FB571325) Sequence 192 from Patent EP1865317. 34 0.045 17
(AF165818) Guillardia theta nucleomorph chromosome 1, comple... 36 0.062 14
(AE014828) Plasmodium falciparum 3D7 chromosome 14 section 1... 32 0.065 14
(CP000488) Candidatus Ruthia magnifica str. Cm (Calyptogena ... 38 0.066 25
(CT868737) M.truncatula DNA sequence from clone MTH2-32M24 o... 40 0.070 8
(AC117176) Dictyostelium discoideum chromosome 2 map 5018074... 34 0.075 17
(CZ527177) GMW2-143L8a.g1 GMW2 Glycine max genomic, genomic ... 52 0.081 1
(AC116982) Dictyostelium discoideum chromosome 2 map 3622643... 36 0.090 13
(AC117081) Dictyostelium discoideum chromosome 2 map 5862124... 42 0.092 14
(CP000743) Methanococcus aeolicus Nankai-3, complete genome. 36 0.092 19
(CU695330) Brassica rapa subsp. pekinensis clone KBrH125F07,... 40 0.095 7
(AF250284) Amsacta moorei entomopoxvirus, complete genome. 32 0.095 15
(AC122850) Mus musculus BAC clone RP23-167J19 from 10, compl... 36 0.099 8
(AX344561) Sequence 12 from Patent WO0200932. 40 0.10 15
(AM428815) Vitis vinifera contig VV78X103983.13, whole genom... 34 0.10 8
(AC114263) Dictyostelium discoideum chromosome 2 map 215673-... 32 0.12 16
(CP000825) Prochlorococcus marinus str. MIT 9215, complete g... 36 0.12 19
(CP001184) Ureaplasma urealyticum serovar 10 str. ATCC 33699... 36 0.13 14
(FH020699) CHO_OF400xc11r1.ab1 CHO_OF Nicotiana tabacum geno... 40 0.13 2
(AE002139) Ureaplasma parvum serovar 3 str. ATCC 700970 sect... 32 0.13 7
(CP000395) Borrelia afzelii PKo, complete genome. 34 0.13 20
(ER549876) 1093016215162 Global-Ocean-Sampling_GS-35-01-01-1... 38 0.13 4
(AC172742) Medicago truncatula chromosome 7 clone mth2-16i6,... 38 0.14 5
(CP000576) Prochlorococcus marinus str. MIT 9301, complete g... 36 0.15 23
(AC213159) Populus trichocarpa clone POP091-F21, complete se... 38 0.15 6
(AX344558) Sequence 9 from Patent WO0200932. 34 0.16 20
(ER554331) 1093016287930 Global-Ocean-Sampling_GS-35-01-01-1... 38 0.18 4
(CP000716) Thermosipho melanesiensis BI429, complete genome. 36 0.21 23
>(BJ432310) Dictyostelium discoideum cDNA clone:ddv18f12, 3' end,
single read.
Length = 786
Score = 741 bits (374), Expect(2) = 0.0
Identities = 374/374 (100%)
Strand = Plus / Minus
Query: 1455 cagtatggtaaaggccaatccatccaattccaaaaattcaatacttcaacatcaccatca 1514
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 423 cagtatggtaaaggccaatccatccaattccaaaaattcaatacttcaacatcaccatca 364
Query: 1515 tctgcattttcctatttcacactcagactattcccaaatggtcaatacaatggtgaaaca 1574
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 363 tctgcattttcctatttcacactcagactattcccaaatggtcaatacaatggtgaaaca 304
Query: 1575 atttcaattcatcttgtaaaattatttagaaataaatctagaattagttttagctttgaa 1634
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 303 atttcaattcatcttgtaaaattatttagaaataaatctagaattagttttagctttgaa 244
Query: 1635 attgaaaatcatattaacccatcatcaaatgaagaaattgattcaagattcctatttggt 1694
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 243 attgaaaatcatattaacccatcatcaaatgaagaaattgattcaagattcctatttggt 184
Query: 1695 aatttaaatgattattattcaacaattttctataaagaatataataaagaaaatggtttc 1754
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 183 aatttaaatgattattattcaacaattttctataaagaatataataaagaaaatggtttc 124
Query: 1755 atttctgaagatgatactttagtaattcattttaatgttgaaattttaaaatattatgat 1814
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123 atttctgaagatgatactttagtaattcattttaatgttgaaattttaaaatattatgat 64
Query: 1815 gatacatttatcac 1828
||||||||||||||
Sbjct: 63 gatacatttatcac 50
Score = 599 bits (302), Expect(2) = 0.0
Identities = 302/302 (100%)
Strand = Plus / Minus
Query: 1092 tgtttaaaagttttaaaacaatgtgaattttgttttaaattaattgaaagaggtgaattt 1151
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 786 tgtttaaaagttttaaaacaatgtgaattttgttttaaattaattgaaagaggtgaattt 727
Query: 1152 aataatcatcaagatacaatatgtctatcgaaattaatcaaatgtccatttaatgagggt 1211
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 726 aataatcatcaagatacaatatgtctatcgaaattaatcaaatgtccatttaatgagggt 667
Query: 1212 ggttgtgtggatttggtgaagcgttcagatattaaagagcatttatcagtacttgctggt 1271
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 666 ggttgtgtggatttggtgaagcgttcagatattaaagagcatttatcagtacttgctggt 607
Query: 1272 gaacatcttttatactctattacaatgattaatagtttatcattgaaattagagaaatca 1331
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 606 gaacatcttttatactctattacaatgattaatagtttatcattgaaattagagaaatca 547
Query: 1332 aattcagaattacaagaatcaatttcatactcaaggttattgaaaaaggattttaaagaa 1391
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 546 aattcagaattacaagaatcaatttcatactcaaggttattgaaaaaggattttaaagaa 487
Query: 1392 tt 1393
||
Sbjct: 486 tt 485
Score = 167 bits (84), Expect = 2e-36
Identities = 84/84 (100%)
Strand = Plus / Minus
Query: 592 tgtttaaaagttttaaaacaatgtgaattttgttttaaattaattgaaagaggtgaattt 651
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 786 tgtttaaaagttttaaaacaatgtgaattttgttttaaattaattgaaagaggtgaattt 727
Query: 652 aataatcatcaagatacaatatgt 675
||||||||||||||||||||||||
Sbjct: 726 aataatcatcaagatacaatatgt 703
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Number of Sequences: 98226423
Number of Hits to DB: 2,537,323,860
Number of extensions: 176256289
Number of successful extensions: 15773811
Number of sequences better than 10.0: 383
Length of query: 1880
Length of database: 98,766,808,389
Length adjustment: 24
Effective length of query: 1856
Effective length of database: 100,704,341,533
Effective search space: 186907257885248
Effective search space used: 186907257885248
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)
|
| protein update |
2009. 7.15 |
| Homology vs Protein |
Query= Contig-U15242-1 (Contig-U15242-1Q) /CSM_Contig/Contig-U15242-1Q.Seq.d
(1880 letters)
Database: nrp_B
3,236,559 sequences; 1,051,180,864 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC117075_2(AC117075|pid:none) Dictyostelium discoideum chromosom... 110 2e-22
A29361(A29361) DG17 protein - slime mold (Dictyostelium discoide... 107 2e-21
AC117072_44(AC117072|pid:none) Dictyostelium discoideum chromoso... 92 5e-17
AC116963_47(AC116963|pid:none) Dictyostelium discoideum chromoso... 76 5e-12
EF210346_1(EF210346|pid:none) Branchiostoma belcheri tumor necro... 72 7e-11
S71821(S71821;S78550)probable interleukin 1 signal-transducing p... 65 1e-08
(Q9Y4K3) RecName: Full=TNF receptor-associated factor 6; AltName... 65 1e-08
EU204929_1(EU204929|pid:none) Macaca mulatta TNF receptor-associ... 64 1e-08
EU204928_1(EU204928|pid:none) Cercocebus torquatus atys TNF rece... 64 1e-08
CR548612_391(CR548612|pid:none) Paramecium tetraurelia macronucl... 64 2e-08
BC169064_1(BC169064|pid:none) Rattus norvegicus Tnf receptor-ass... 63 3e-08
CR855449_1(CR855449|pid:none) Xenopus tropicalis finished cDNA, ... 62 7e-08
BC082342_1(BC082342|pid:none) Xenopus tropicalis TNF receptor-as... 62 9e-08
AK155434_1(AK155434|pid:none) Mus musculus NOD-derived CD11c +ve... 61 2e-07
AY616583_1(AY616583|pid:none) Danio rerio TNF-receptor associate... 59 5e-07
AL929208_2(AL929208|pid:none) Zebrafish DNA sequence from clone ... 59 6e-07
BC055214_1(BC055214|pid:none) Danio rerio TNF receptor-associate... 59 6e-07
AB100868_1(AB100868|pid:none) Gallus gallus TRAF-5 mRNA for tumo... 59 8e-07
BC168921_1(BC168921|pid:none) Rattus norvegicus Tnf receptor-ass... 59 8e-07
(Q7XA77) RecName: Full=E3 ubiquitin-protein ligase SINA-like 5; ... 58 1e-06
AK038136_1(AK038136|pid:none) Mus musculus 16 days neonate thymu... 58 1e-06
D78141_1(D78141|pid:none) Mouse mRNA for TRAF5 protein, complete... 58 1e-06
(P70191) RecName: Full=TNF receptor-associated factor 5; &AK144... 58 1e-06
BC075143_1(BC075143|pid:none) Xenopus laevis MGC81955 protein, m... 57 2e-06
EU687744_1(EU687744|pid:none) Canis lupus familiaris TRAF5 (TRAF... 57 2e-06
AC016795_24(AC016795|pid:none) Arabidopsis thaliana chromosome I... 55 9e-06
AF027570_1(AF027570|pid:none) Mus musculus tumor necrosis factor... 55 1e-05
EF210343_1(EF210343|pid:none) Branchiostoma belcheri tumor necro... 54 2e-05
(Q60803) RecName: Full=TNF receptor-associated factor 3; AltName... 50 2e-05
BC134494_1(BC134494|pid:none) Bos taurus TNF receptor-associated... 54 3e-05
AK052934_1(AK052934|pid:none) Mus musculus 16 days neonate heart... 54 3e-05
EU832054_1(EU832054|pid:none) Synthetic construct Homo sapiens c... 54 3e-05
(Q12933) RecName: Full=TNF receptor-associated factor 2; AltName... 54 3e-05
S56163(S56163;S58925;S58926;I38729)tumor necrosis factor type 2 ... 54 3e-05
U12597_1(U12597|pid:none) Human tumor necrosis factor type 2 rec... 54 3e-05
BC077157_1(BC077157|pid:none) Danio rerio TNF receptor-associate... 52 6e-05
AL807372_9(AL807372|pid:none) Neurospora crassa DNA linkage grou... 52 6e-05
U69108_1(U69108|pid:none) Homo sapiens TNF receptor associated f... 52 8e-05
(O00463) RecName: Full=TNF receptor-associated factor 5; AltName... 52 8e-05
A55960(A55960;A55649;A55135) CD40 receptor-associated factor 1 -... 49 9e-05
AY956816_1(AY956816|pid:none) Euprymna scolopes tumor necrosis f... 51 1e-04
U33840_1(U33840|pid:none) Mus musculus TRAF-related protein (TRA... 50 2e-04
BC075550_1(BC075550|pid:none) Xenopus tropicalis TRAF-type zinc ... 50 2e-04
CR942471_1(CR942471|pid:none) Xenopus tropicalis finished cDNA, ... 50 2e-04
AK298370_1(AK298370|pid:none) Homo sapiens cDNA FLJ54037 complet... 50 2e-04
AK303286_1(AK303286|pid:none) Homo sapiens cDNA FLJ55439 complet... 50 3e-04
EF210345_1(EF210345|pid:none) Branchiostoma belcheri tumor necro... 50 4e-04
FN318206_1(FN318206|pid:none) Schistosoma japonicum isolate Anhu... 50 4e-04
AJ617779_1(AJ617779|pid:none) Hydractinia echinata mRNA for TNF-... 50 4e-04
(Q13114) RecName: Full=TNF receptor-associated factor 3; AltName... 47 4e-04
AK147304_1(AK147304|pid:none) Mus musculus adult male brain UNDE... 49 5e-04
AK147362_1(AK147362|pid:none) Mus musculus adult male brain UNDE... 49 5e-04
(Q08CH8) RecName: Full=Cysteine and histidine-rich protein 1; &... 49 6e-04
BC168705_1(BC168705|pid:none) Rattus norvegicus cysteine and his... 49 8e-04
AK222399_1(AK222399|pid:none) Ciona intestinalis mRNA for zinc f... 49 8e-04
BC123107_1(BC123107|pid:none) Xenopus laevis cDNA clone IMAGE:72... 49 8e-04
FN357660_2(FN357660|pid:none) Schistosoma mansoni genome sequenc... 49 8e-04
CP001577_362(CP001577|pid:none) Micromonas sp. RCC299 chromosome... 48 0.001
BC110974_1(BC110974|pid:none) Xenopus laevis Cysteine and histid... 48 0.001
AJ517803_1(AJ517803|pid:none) Oncorhynchus mykiss mRNA for tumou... 48 0.001
BT059017_1(BT059017|pid:none) Salmo salar clone ssal-rgf-520-217... 48 0.001
AP004111_13(AP004111|pid:none) Oryza sativa Japonica Group genom... 48 0.001
AJ548839_1(AJ548839|pid:none) Oncorhynchus mykiss mRNA for tumor... 47 0.002
BC076768_1(BC076768|pid:none) Xenopus laevis MGC83213 protein, m... 47 0.002
(Q9M2P4) RecName: Full=E3 ubiquitin-protein ligase SINAT2; ... 47 0.003
DQ455748_1(DQ455748|pid:none) Ctenopharyngodon idella TNF recept... 47 0.003
AJ297860_1(AJ297860|pid:none) Carassius auratus mRNA for tumor n... 47 0.003
(Q2TBT8) RecName: Full=RING finger protein 151; &BC109671_1(BC1... 46 0.004
U15637_1(U15637|pid:none) Homo sapiens CD40 binding protein (CD4... 43 0.004
AK102906_1(AK102906|pid:none) Oryza sativa Japonica Group cDNA c... 46 0.005
EU972832_1(EU972832|pid:none) Zea mays clone 388835 unknown mRNA. 46 0.005
AP003833_2(AP003833|pid:none) Oryza sativa Japonica Group genomi... 46 0.005
EU961340_1(EU961340|pid:none) Zea mays clone 234649 TRAF type zi... 45 0.009
BT040855_1(BT040855|pid:none) Zea mays full-length cDNA clone ZM... 45 0.009
BC077302_1(BC077302|pid:none) Xenopus laevis PDZ domain containi... 45 0.012
AE017349_401(AE017349|pid:none) Cryptococcus neoformans var. neo... 45 0.012
FN392319_715(FN392319|pid:none) Pichia pastoris GS115 chromosome... 45 0.012
AM270347_51(AM270347|pid:none) Aspergillus niger contig An15c020... 45 0.012
AY136379_1(AY136379|pid:none) Arabidopsis thaliana expressed pro... 44 0.020
AJ245479_3(AJ245479|pid:none) Brassica napus subsp. napus Sll3, ... 44 0.020
AJ249908_1(AJ249908|pid:none) Brassica napus mRNA for SIAH1 prot... 44 0.020
AK104468_1(AK104468|pid:none) Oryza sativa Japonica Group cDNA c... 44 0.027
AB111062_1(AB111062|pid:none) Eptatretus burgeri Traf3 mRNA for ... 44 0.027
BC029501_1(BC029501|pid:none) Homo sapiens ring finger protein 1... 43 0.035
(Q5BK76) RecName: Full=Cysteine and histidine-rich protein 1; 43 0.035
AF079837_1(AF079837|pid:none) Drosophila melanogaster TRAF1 (Tra... 43 0.035
(Q9QXA1) RecName: Full=Cysteine and histidine-rich protein 1; &... 43 0.035
AY496942_2(AY496942|pid:none) Leishmania mexicana unknown (KLP-U... 43 0.046
(Q7YR89) RecName: Full=Cysteine and histidine-rich protein 1; 43 0.046
BC072794_1(BC072794|pid:none) Xenopus laevis MGC80116 protein, m... 43 0.046
AK100833_1(AK100833|pid:none) Oryza sativa Japonica Group cDNA c... 43 0.046
CP000594_58(CP000594|pid:none) Ostreococcus lucimarinus CCE9901 ... 42 0.059
EF434387_1(EF434387|pid:none) Zea mays SINA2 mRNA, complete cds.... 42 0.059
EU189946_1(EU189946|pid:none) Medicago truncatula SINA2 mRNA, co... 42 0.059
BT051901_1(BT051901|pid:none) Medicago truncatula clone MTYF5_F6... 42 0.059
(Q9FKD9) RecName: Full=Putative E3 ubiquitin-protein ligase SINA... 42 0.059
(P68907) RecName: Full=PDZ domain-containing RING finger protein... 42 0.078
AX362557_1(AX362557|pid:none) Sequence 1 from Patent WO0208252. 42 0.078
(Q91XL2) RecName: Full=Ligand of Numb protein X 2; AltName: Full... 42 0.078
(Q8N448) RecName: Full=Ligand of Numb protein X 2; AltName: Full... 42 0.078
(Q9STN8) RecName: Full=E3 ubiquitin-protein ligase SINAT4; ... 42 0.078
BC117937_1(BC117937|pid:none) Mus musculus ligand of numb-protei... 42 0.078
AM477118_1(AM477118|pid:none) Vitis vinifera contig VV78X175812.... 42 0.10
BT036518_1(BT036518|pid:none) Zea mays full-length cDNA clone ZM... 42 0.10
AE014134_2473(AE014134|pid:none) Drosophila melanogaster chromos... 42 0.10
DQ492566_1(DQ492566|pid:none) Chaca sp. INHS 93864 recombination... 41 0.13
AF348168_1(AF348168|pid:none) Caenorhabditis elegans TRF-1 mRNA,... 41 0.13
BT078652_1(BT078652|pid:none) Lepeophtheirus salmonis Pacific fo... 41 0.13
BT076222_1(BT076222|pid:none) Caligus rogercresseyi clone crog-e... 41 0.17
DQ144990_1(DQ144990|pid:none) Symbiodinium sp. C3 ubiquitin liga... 41 0.17
CP001334_4(CP001334|pid:none) Micromonas sp. RCC299 chromosome 1... 41 0.17
AC146866_19(AC146866|pid:none) Medicago truncatula clone mth2-19... 41 0.17
(Q9FKD7) RecName: Full=E3 ubiquitin-protein ligase SINA-like 7; ... 40 0.23
AK129156_1(AK129156|pid:none) Mus musculus mRNA for mKIAA0496 pr... 40 0.23
AM910987_196(AM910987|pid:none) Plasmodium knowlesi strain H chr... 40 0.23
DQ492625_1(DQ492625|pid:none) Porochilus rendahli voucher INHS 9... 40 0.23
(Q5FWL3) RecName: Full=E3 ubiquitin-protein ligase NRDP1; ... 40 0.23
AK160381_1(AK160381|pid:none) Homo sapiens mRNA for FLJ00352 pro... 40 0.23
BC112724_1(BC112724|pid:none) Bos taurus ring finger protein 41,... 40 0.23
DQ492640_1(DQ492640|pid:none) Neosilurus ater voucher ANSP 18033... 40 0.23
AF175124_1(AF175124|pid:none) Gossypium hirsutum SINAH1 protein ... 40 0.23
AK015745_1(AK015745|pid:none) Mus musculus adult male testis cDN... 40 0.30
AY084712_1(AY084712|pid:none) Arabidopsis thaliana clone 115713 ... 40 0.30
(Q28H21) RecName: Full=Polycomb group RING finger protein 1; &C... 40 0.30
(Q84K34) RecName: Full=E3 ubiquitin-protein ligase SINA-like 10;... 40 0.30
BC119977_1(BC119977|pid:none) Bos taurus ligand of numb-protein ... 40 0.30
(Q84JL3) RecName: Full=E3 ubiquitin-protein ligase SINAT3; ... 40 0.30
AK020527_1(AK020527|pid:none) Mus musculus 12 days embryo embryo... 40 0.30
(Q5R7T5) RecName: Full=E3 ubiquitin-protein ligase NRDP1; ... 40 0.30
BC170727_1(BC170727|pid:none) Xenopus tropicalis polycomb group ... 40 0.30
BC167306_1(BC167306|pid:none) Xenopus tropicalis polycomb group ... 40 0.30
AM502231_13(AM502231|pid:none) Leishmania infantum chromosome 13. 40 0.30
EU054280_1(EU054280|pid:none) Nactus vankampeni voucher FK8324 r... 40 0.39
BT080118_1(BT080118|pid:none) Esox lucius clone eluc-evq-503-303... 40 0.39
BC068644_1(BC068644|pid:none) Xenopus laevis RING finger protein... 40 0.39
BT071783_1(BT071783|pid:none) Picea sitchensis clone WS0454_N20 ... 40 0.39
EU054279_1(EU054279|pid:none) Nactus vankampeni voucher FK11384 ... 40 0.39
AK300804_1(AK300804|pid:none) Homo sapiens cDNA FLJ60166 complet... 40 0.39
AK071049_1(AK071049|pid:none) Oryza sativa Japonica Group cDNA c... 40 0.39
CP000591_79(CP000591|pid:none) Ostreococcus lucimarinus CCE9901 ... 40 0.39
(Q9FKD5) RecName: Full=Putative E3 ubiquitin-protein ligase SINA... 40 0.39
AK241429_1(AK241429|pid:none) Oryza sativa Japonica Group cDNA, ... 40 0.39
AY891907_1(AY891907|pid:none) Synthetic construct Homo sapiens c... 40 0.39
BC004952_1(BC004952|pid:none) Homo sapiens polycomb group ring f... 39 0.50
BC084252_1(BC084252|pid:none) Xenopus laevis hypothetical LOC495... 39 0.50
(Q9CQ29) RecName: Full=RING finger protein 151; &AK005850_1(AK0... 39 0.50
(Q8R023) RecName: Full=Polycomb group RING finger protein 1; Alt... 39 0.50
AM910994_624(AM910994|pid:none) Plasmodium knowlesi strain H chr... 39 0.50
JC4296(JC4296)ring finger protein - fruit fly (Drosophila melano... 39 0.50
(Q17RB8) RecName: Full=LON peptidase N-terminal domain and RING ... 39 0.50
AX886036_1(AX886036|pid:none) Sequence 1899 from Patent EP1033401. 39 0.50
BC162047_1(BC162047|pid:none) Rattus norvegicus Tnf receptor ass... 39 0.50
EU490974_1(EU490974|pid:none) Xiurenbagrus gigas isolate specime... 39 0.50
EU490959_1(EU490959|pid:none) Breitensteinia cessator voucher H.... 39 0.50
AF087884_1(AF087884|pid:none) Homo sapiens RNF3A-2 mRNA, complet... 39 0.50
AF233449_1(AF233449|pid:none) Mus musculus TNF receptor associat... 39 0.50
EU490975_1(EU490975|pid:none) Xiurenbagrus gigas isolate specime... 39 0.50
AC079285_10(AC079285|pid:none) Arabidopsis thaliana chromosome 1... 39 0.50
AE014296_2749(AE014296|pid:none) Drosophila melanogaster chromos... 39 0.50
DQ492554_1(DQ492554|pid:none) Bagrichthys macropterus voucher IN... 39 0.66
DQ492555_1(DQ492555|pid:none) Bagrus docmak voucher CU 90408 rec... 39 0.66
DQ492611_1(DQ492611|pid:none) Synodontis batesii voucher CU 8112... 39 0.66
BC124485_1(BC124485|pid:none) Danio rerio zgc:153893, mRNA (cDNA... 39 0.66
AK072985_1(AK072985|pid:none) Oryza sativa Japonica Group cDNA c... 39 0.66
AB029018_1(AB029018|pid:none) Homo sapiens mRNA for KIAA1095 pro... 39 0.66
BC150623_1(BC150623|pid:none) Homo sapiens PDZ domain containing... 39 0.66
CR954211_86(CR954211|pid:none) Ostreococcus tauri strain OTTH059... 39 0.66
BC110242_1(BC110242|pid:none) Bos taurus polycomb group ring fin... 39 0.66
CR858870_1(CR858870|pid:none) Pongo abelii mRNA; cDNA DKFZp469H0... 39 0.66
(Q9UPQ7) RecName: Full=PDZ domain-containing RING finger protein... 39 0.66
BC014432_1(BC014432|pid:none) Homo sapiens PDZ domain containing... 39 0.66
DQ492588_1(DQ492588|pid:none) Hemisilurus moolenburghi voucher U... 39 0.66
EU054274_1(EU054274|pid:none) Nactus pelagicus voucher FF6 recom... 39 0.86
AY892181_1(AY892181|pid:none) Synthetic construct Homo sapiens c... 39 0.86
(P35227) RecName: Full=Polycomb group RING finger protein 2; Alt... 39 0.86
EU054275_1(EU054275|pid:none) Nactus pelagicus voucher AMB7287 r... 39 0.86
BC170678_1(BC170678|pid:none) Xenopus tropicalis ring finger and... 39 0.86
AP003046_21(AP003046|pid:none) Oryza sativa Japonica Group genom... 39 0.86
AK120816_1(AK120816|pid:none) Oryza sativa Japonica Group cDNA c... 39 0.86
CP000591_300(CP000591|pid:none) Ostreococcus lucimarinus CCE9901... 39 0.86
EU054272_1(EU054272|pid:none) Gekko gecko voucher CAS204952 reco... 39 0.86
EF534813_1(EF534813|pid:none) Gekko gecko recombination activati... 39 0.86
AB464037_1(AB464037|pid:none) Synthetic construct DNA, clone: pF... 39 0.86
DQ492643_1(DQ492643|pid:none) Micronema apogon voucher UMMZ 2433... 39 0.86
DQ492609_1(DQ492609|pid:none) Wallago sp. INHS 93598 recombinati... 39 0.86
BC161699_1(BC161699|pid:none) Xenopus laevis hypothetical protei... 39 0.86
BT052037_1(BT052037|pid:none) Medicago truncatula clone MTYF9_FA... 38 1.1
BT021682_1(BT021682|pid:none) Bos taurus RAD18 homolog (S. cerev... 38 1.1
AC137828_10(AC137828|pid:none) Medicago truncatula clone mth2-6c... 38 1.1
BC109568_1(BC109568|pid:none) Bos taurus postreplication repair ... 38 1.1
EF551561_1(EF551561|pid:none) Ambystoma mexicanum recombination ... 38 1.1
AC155895_20(AC155895|pid:none) Medicago truncatula chromosome 2 ... 38 1.1
AK107155_1(AK107155|pid:none) Oryza sativa Japonica Group cDNA c... 38 1.1
U62645_1(U62645|pid:none) Carcharhinus leucas RAG1 mRNA, complet... 38 1.1
BC122984_1(BC122984|pid:none) Xenopus tropicalis PDZ domain cont... 38 1.1
EF434384_1(EF434384|pid:none) Zea mays SINA1 mRNA, complete cds. 38 1.1
DQ492559_1(DQ492559|pid:none) Belonoglanis tenuis voucher CU 881... 38 1.1
DQ492645_1(DQ492645|pid:none) Malapterurus tanganyikaensis vouch... 38 1.1
(Q8JIR0) RecName: Full=Polycomb complex protein BMI-1-A; AltName... 38 1.1
(Q9C6H4) RecName: Full=E3 ubiquitin-protein ligase SINA-like 1; ... 38 1.1
BT054795_1(BT054795|pid:none) Zea mays full-length cDNA clone ZM... 38 1.1
EU975681_1(EU975681|pid:none) Zea mays clone 496577 ubiquitin li... 38 1.1
DQ288858_12(DQ288858|pid:none) Spodoptera litura granulovirus is... 38 1.1
BT055393_1(BT055393|pid:none) Zea mays full-length cDNA clone ZM... 38 1.5
EU966994_1(EU966994|pid:none) Zea mays clone 298706 ubiquitin li... 38 1.5
AL844505_59(AL844505|pid:none) Plasmodium falciparum 3D7 chromos... 38 1.5
AL158211_8(AL158211|pid:none) Human DNA sequence from clone RP11... 38 1.5
AL928680_3(AL928680|pid:none) Mouse DNA sequence from clone RP23... 38 1.5
DQ492580_1(DQ492580|pid:none) Glyptothorax cf. trilineatus INHS ... 38 1.5
(Q8NHY2) RecName: Full=E3 ubiquitin-protein ligase RFWD2; ... 38 1.5
(Q9R1A8) RecName: Full=E3 ubiquitin-protein ligase RFWD2; ... 38 1.5
(Q9QXK2) RecName: Full=E3 ubiquitin-protein ligase RAD18; ... 38 1.5
DQ492620_1(DQ492620|pid:none) Pterocryptis anomala recombination... 38 1.5
DQ492589_1(DQ492589|pid:none) Mystus bocourti voucher INHS 93586... 38 1.5
AK145437_1(AK145437|pid:none) Mus musculus 1 cell embryo 1 cell ... 38 1.5
BT039387_1(BT039387|pid:none) Zea mays full-length cDNA clone ZM... 38 1.5
AE014297_1564(AE014297|pid:none) Drosophila melanogaster chromos... 38 1.5
AY892893_1(AY892893|pid:none) Synthetic construct Homo sapiens c... 38 1.5
AF394913_1(AF394913|pid:none) Rosa hybrid cultivar photoregulato... 38 1.5
EF434382_1(EF434382|pid:none) Zea mays SINA5 mRNA, complete cds. 38 1.5
BT034805_1(BT034805|pid:none) Zea mays full-length cDNA clone ZM... 38 1.5
EU054282_1(EU054282|pid:none) Dixonius vietnamensis voucher LLG7... 38 1.5
BC168209_1(BC168209|pid:none) Rattus norvegicus Bmi1 polycomb ri... 38 1.5
DQ455749_1(DQ455749|pid:none) Ctenopharyngodon idella TNF recept... 38 1.5
BC158002_1(BC158002|pid:none) Mus musculus ring finger and WD re... 38 1.5
DQ492626_1(DQ492626|pid:none) Plotosus lineatus voucher ANSP 182... 38 1.5
AF169796_1(AF169796|pid:none) Homo sapiens zinc finger DNA bindi... 38 1.5
AM920436_216(AM920436|pid:none) Penicillium chrysogenum Wisconsi... 38 1.5
(Q9TST0) RecName: Full=Polycomb complex protein BMI-1; AltName: ... 38 1.5
AL158211_7(AL158211|pid:none) Human DNA sequence from clone RP11... 38 1.5
CR456911_1(CR456911|pid:none) Homo sapiens full open reading fra... 38 1.5
CS065998_1(CS065998|pid:none) Sequence 23 from Patent WO20050309... 38 1.5
AM488799_2(AM488799|pid:none) Vitis vinifera contig VV78X098962.... 38 1.5
AL928680_4(AL928680|pid:none) Mouse DNA sequence from clone RP23... 38 1.5
AY890925_1(AY890925|pid:none) Synthetic construct Homo sapiens c... 38 1.5
BT069854_1(BT069854|pid:none) Zea mays full-length cDNA clone ZM... 38 1.5
(P35226) RecName: Full=Polycomb complex protein BMI-1; AltName: ... 38 1.5
CS065996_1(CS065996|pid:none) Sequence 21 from Patent WO20050309... 38 1.5
CS065976_1(CS065976|pid:none) Sequence 1 from Patent WO200503093... 38 1.5
EF186007_1(EF186007|pid:none) Carassius auratus recombination ac... 38 1.5
CR855400_1(CR855400|pid:none) Xenopus tropicalis finished cDNA, ... 37 1.9
CR548612_300(CR548612|pid:none) Paramecium tetraurelia macronucl... 37 1.9
(Q91648) RecName: Full=Polycomb complex protein BMI-1-A; AltName... 37 1.9
EU054220_1(EU054220|pid:none) Homopholis walbergii voucher AMB84... 37 1.9
DQ492634_1(DQ492634|pid:none) Parauchenipterus galeatus voucher ... 37 1.9
(Q640D5) RecName: Full=Polycomb complex protein BMI-1-B; AltName... 37 1.9
BC072892_1(BC072892|pid:none) Xenopus laevis xbmi-1 protein, mRN... 37 1.9
AK059108_1(AK059108|pid:none) Oryza sativa Japonica Group cDNA c... 37 1.9
FJ236699_1(FJ236699|pid:none) Sus scrofa RAD18-like protein (RAD... 37 1.9
EU054218_1(EU054218|pid:none) Homopholis walbergii voucher AB839... 37 1.9
BC068930_1(BC068930|pid:none) Xenopus laevis hypothetical protei... 37 1.9
AY609381_1(AY609381|pid:none) Danio rerio ZFP313 protein mRNA, c... 37 1.9
AE014186_223(AE014186|pid:none) Plasmodium falciparum 3D7 chromo... 37 1.9
EU054277_1(EU054277|pid:none) Nactus sp. haerodactylodes recombi... 37 1.9
EU054222_1(EU054222|pid:none) Homopholis walbergii voucher MCZF3... 37 1.9
CP000769_4125(CP000769|pid:none) Anaeromyxobacter sp. Fw109-5, c... 37 1.9
BC129048_1(BC129048|pid:none) Xenopus laevis hypothetical protei... 37 1.9
CU928179_318(CU928179|pid:none) Zygosaccharomyces rouxii strain ... 37 1.9
EU054276_1(EU054276|pid:none) Nactus sp. ASW510 recombination ac... 37 2.5
EU974332_1(EU974332|pid:none) Zea mays clone 446343 prenyltransf... 37 2.5
BT060732_1(BT060732|pid:none) Zea mays full-length cDNA clone ZM... 37 2.5
EF434383_1(EF434383|pid:none) Zea mays SINA3 mRNA, complete cds. 37 2.5
(Q965X6) RecName: Full=E3 ubiquitin-protein ligase sia-1; ... 37 2.5
AL035525_13(AL035525|pid:none) Arabidopsis thaliana DNA chromoso... 37 2.5
BT061909_1(BT061909|pid:none) Zea mays full-length cDNA clone ZM... 37 2.5
DQ865922_1(DQ865922|pid:none) Tlacuatzin canescens recombination... 37 2.5
BT059488_1(BT059488|pid:none) Salmo salar clone ssal-rgf-528-134... 37 2.5
DQ492630_1(DQ492630|pid:none) Phractura longicauda voucher CU 81... 37 2.5
CP001574_661(CP001574|pid:none) Micromonas sp. RCC299 chromosome... 37 2.5
BC134929_1(BC134929|pid:none) Danio rerio zgc:162228, mRNA (cDNA... 37 2.5
DQ492608_1(DQ492608|pid:none) Zaireichthys sp. CU 90424 recombin... 37 2.5
BT041847_1(BT041847|pid:none) Zea mays full-length cDNA clone ZM... 37 2.5
AF108420_3(AF108420|pid:none) Fugu rubripes prohormone convertas... 37 2.5
DQ492621_1(DQ492621|pid:none) Pterobunocephalus sp. ANSP 182774 ... 37 2.5
T50561(T50561) SINA1 protein [imported] - Vitis vinifera &Y1847... 37 2.5
BT070541_1(BT070541|pid:none) Picea sitchensis clone WS02735_E01... 37 2.5
EU490962_1(EU490962|pid:none) Amblyceps serratum voucher H.H.Ng ... 37 2.5
DQ492619_1(DQ492619|pid:none) Pylodictis olivaris voucher ANSP 1... 37 3.3
DQ492540_1(DQ492540|pid:none) Ageneiosus ucayalensis voucher INH... 37 3.3
EF490741_1(EF490741|pid:none) Uroplatus henkeli voucher ZSM 113/... 37 3.3
DQ492550_1(DQ492550|pid:none) Atopochilus savorgnani voucher CU ... 37 3.3
EF490742_1(EF490742|pid:none) Uroplatus henkeli voucher FGMV 200... 37 3.3
EU054284_1(EU054284|pid:none) Heteronotia planiceps voucher AMS1... 37 3.3
DQ492598_1(DQ492598|pid:none) Imparfinis stictonotus voucher ANS... 37 3.3
CR388403_1(CR388403|pid:none) Zebrafish DNA sequence from clone ... 37 3.3
DQ492582_1(DQ492582|pid:none) Gogo arcuatus voucher UMMZ 238042 ... 37 3.3
EF490743_1(EF490743|pid:none) Uroplatus henkeli voucher FGMV 200... 37 3.3
BT035771_1(BT035771|pid:none) Zea mays full-length cDNA clone ZM... 37 3.3
BT049703_1(BT049703|pid:none) Salmo salar clone ssal-eve-575-311... 37 3.3
AB277346_1(AB277346|pid:none) Limnonectes laticeps RAG1 gene for... 37 3.3
CR382135_598(CR382135|pid:none) Debaryomyces hansenii strain CBS... 37 3.3
DQ812520_2(DQ812520|pid:none) Spironucleus barkhanus isolate Sp3... 37 3.3
(Q2HJ46) RecName: Full=E3 ubiquitin-protein ligase RNF8; ... 37 3.3
EF536157_1(EF536157|pid:none) Paroedura sanctijohannis voucher Z... 37 3.3
DQ492587_1(DQ492587|pid:none) Hemibagrus wyckioides voucher INHS... 36 4.3
(Q8BTQ0) RecName: Full=Polycomb group RING finger protein 3; Alt... 36 4.3
AK033609_1(AK033609|pid:none) Mus musculus adult male cecum cDNA... 36 4.3
EF085507_1(EF085507|pid:none) Picea sitchensis clone WS02722_C14... 36 4.3
AY522332_13(AY522332|pid:none) Agrotis segetum granulovirus, com... 36 4.3
DQ275438_1(DQ275438|pid:none) Pachydactylus bicolor recombinatio... 36 4.3
DQ492596_1(DQ492596|pid:none) Imparfinis cf. cochabambae ANSP 18... 36 4.3
EU490971_1(EU490971|pid:none) Liobagrus styani isolate specimen ... 36 4.3
AY089445_1(AY089445|pid:none) Drosophila melanogaster AT26312 fu... 36 4.3
(Q2KJ29) RecName: Full=Polycomb group RING finger protein 3; &B... 36 4.3
EU490966_1(EU490966|pid:none) Liobagrus marginatoides isolate sp... 36 4.3
BC123486_1(BC123486|pid:none) Bos taurus TRAF-type zinc finger d... 36 4.3
(Q58D05) RecName: Full=TRAF-type zinc finger domain-containing p... 36 4.3
DQ865885_1(DQ865885|pid:none) Chironectes minimus recombination ... 36 4.3
AF480944_1(AF480944|pid:none) Arabidopsis thaliana ring finger E... 36 4.3
DQ865912_1(DQ865912|pid:none) Monodelphis brevicaudata recombina... 36 4.3
EF490731_1(EF490731|pid:none) Uroplatus sikorae voucher ZSM 690/... 36 4.3
DQ492597_1(DQ492597|pid:none) Imparfinis cf. stictonotus ANSP 17... 36 4.3
EF534809_1(EF534809|pid:none) Cnemaspis limi voucher LLG 6267 re... 36 4.3
FJ039932_1(FJ039932|pid:none) Chelonia mydas isolate CM_EasternP... 36 4.3
DQ492568_1(DQ492568|pid:none) Clarias batrachus voucher INHS 934... 36 4.3
(Q8T3Y0) RecName: Full=Probable E3 ubiquitin-protein ligase sina... 36 4.3
EF490733_1(EF490733|pid:none) Uroplatus ebenaui voucher ZSM 322/... 36 5.6
DQ492618_1(DQ492618|pid:none) Rhamdia sp. MZUSP 78453 recombinat... 36 5.6
FJ571631_1(FJ571631|pid:none) Pletholax gracilis recombination a... 36 5.6
EF490746_1(EF490746|pid:none) Uroplatus phantasticus voucher FGM... 36 5.6
DQ492557_1(DQ492557|pid:none) Bathybagrus tetranema voucher SAIA... 36 5.6
CR376844_4(CR376844|pid:none) Zebrafish DNA sequence from clone ... 36 5.6
EF490737_1(EF490737|pid:none) Uroplatus cf. giganteus voucher ZS... 36 5.6
EF490727_1(EF490727|pid:none) Uroplatus lineatus voucher ZCMV 24... 36 5.6
AJ276591_1(AJ276591|pid:none) Pisum sativum cop1 gene for consti... 36 5.6
EU054217_1(EU054217|pid:none) Homopholis mulleri voucher MCZF387... 36 5.6
DQ492633_1(DQ492633|pid:none) Parauchenoglanis balayi voucher CU... 36 5.6
AE014187_414(AE014187|pid:none) Plasmodium falciparum 3D7 chromo... 36 5.6
DQ642714_1(DQ642714|pid:none) Cetopsis coecutiens voucher INHS 5... 36 5.6
EF145471_1(EF145471|pid:none) Populus trichocarpa clone WS01125_... 36 5.6
AB277345_1(AB277345|pid:none) Hoplobatrachus tigerinus RAG1 gene... 36 5.6
DQ492581_1(DQ492581|pid:none) Goeldiella eques voucher INHS 4929... 36 5.6
EU490958_1(EU490958|pid:none) Bunocephalus verrucosus voucher CU... 36 5.6
AC116960_9(AC116960|pid:none) Dictyostelium discoideum chromosom... 36 5.6
CT573109_1(CT573109|pid:none) Zebrafish DNA sequence from clone ... 36 5.6
EU268288_1(EU268288|pid:none) Cyrtodactylus consobrinus voucher ... 36 5.6
U51897_1(U51897|pid:none) Monodelphis domestica recombination-ac... 36 5.6
AL732294_2(AL732294|pid:none) Mouse DNA sequence from clone RP23... 36 5.6
DQ492615_1(DQ492615|pid:none) Schilbe intermedius voucher CU 882... 36 5.6
DQ492590_1(DQ492590|pid:none) Heterobranchus longifilis voucher ... 36 5.6
CR548612_409(CR548612|pid:none) Paramecium tetraurelia macronucl... 36 5.6
AJ276592_1(AJ276592|pid:none) Pisum sativum lip1 mutant cop1 gen... 36 5.6
EF490736_1(EF490736|pid:none) Uroplatus ebenaui voucher FGMV 200... 36 5.6
FN357419_11(FN357419|pid:none) Schistosoma mansoni genome sequen... 36 5.6
(P93471) RecName: Full=E3 ubiquitin-protein ligase COP1; ... 36 5.6
AJ289773_1(AJ289773|pid:none) Pisum sativum mRNA for COP1 regula... 36 5.6
EU054208_1(EU054208|pid:none) Afroedura sp. multiporus recombina... 36 5.6
CP000742_838(CP000742|pid:none) Methanococcus vannielii SB, comp... 36 5.6
BX647064_1(BX647064|pid:none) Homo sapiens mRNA; cDNA DKFZp686L1... 35 7.3
EF536159_1(EF536159|pid:none) Paroedura oviceps voucher ZSM 83/2... 35 7.3
BC168067_1(BC168067|pid:none) Xenopus tropicalis TNF receptor-as... 35 7.3
BC012072_1(BC012072|pid:none) Homo sapiens checkpoint with forkh... 35 7.3
EU293638_1(EU293638|pid:none) Tarentola chazaliae isolate TG 001... 35 7.3
AK097671_1(AK097671|pid:none) Homo sapiens cDNA FLJ40352 fis, cl... 35 7.3
AB067814_1(AB067814|pid:none) Rattus norvegicus Siah1A mRNA for ... 35 7.3
EF536164_1(EF536164|pid:none) Paroedura sp. 1-EG-2007 recombinat... 35 7.3
FJ571629_1(FJ571629|pid:none) Pygopus schraderi recombination ac... 35 7.3
EF536156_1(EF536156|pid:none) Paroedura sanctijohannis voucher Z... 35 7.3
BC089260_1(BC089260|pid:none) Xenopus laevis hypothetical protei... 35 7.3
AF411976_1(AF411976|pid:none) Gallus gallus seven in absentia mR... 35 7.3
S62198_1(S62198|pid:none) Homo sapiens flvi-2/bmi-1 (flvi-2/bmi-... 35 7.3
CR857284_1(CR857284|pid:none) Pongo abelii mRNA; cDNA DKFZp469H0... 35 7.3
DQ492544_1(DQ492544|pid:none) Ameiurus nebulosus voucher ANSP 18... 35 7.3
DQ492595_1(DQ492595|pid:none) Ictalurus punctatus voucher ANSP 1... 35 7.3
AX405642_1(AX405642|pid:none) Sequence 57 from Patent WO0222660. 35 7.3
FJ571628_1(FJ571628|pid:none) Pygopus nigriceps recombination ac... 35 7.3
(P22682) RecName: Full=E3 ubiquitin-protein ligase CBL; ... 35 7.3
EF536152_1(EF536152|pid:none) Paroedura tanjaka voucher ZSM 40/2... 35 7.3
AK153915_1(AK153915|pid:none) Mus musculus 2 days neonate thymus... 35 7.3
DQ865910_1(DQ865910|pid:none) Micoureus regina recombination act... 35 7.3
DQ492551_1(DQ492551|pid:none) Auchenoglanis occidentalis voucher... 35 7.3
DQ492567_1(DQ492567|pid:none) Chrysichthys sp. CU 80695 recombin... 35 7.3
EF534782_1(EF534782|pid:none) Lialis burtonis voucher TG 00078 r... 35 7.3
AY662628_1(AY662628|pid:none) Lialis jicari recombination activa... 35 7.3
AF237765_1(AF237765|pid:none) Xenopus laevis Cbl proto-oncogene ... 35 7.3
(Q8IUQ4) RecName: Full=E3 ubiquitin-protein ligase SIAH1; ... 35 7.3
A63558_1(A63558|pid:none) Sequence 11 from Patent WO9722695. 35 7.3
BC072747_1(BC072747|pid:none) Xenopus laevis MGC79105 protein, m... 35 7.3
(P61092) RecName: Full=E3 ubiquitin-protein ligase SIAH1A; ... 35 7.3
AB451253_1(AB451253|pid:none) Homo sapiens SIAH1 mRNA for seven ... 35 7.3
(Q6GQL0) RecName: Full=E3 ubiquitin-protein ligase CBL-B-A; ... 35 7.3
EF534793_1(EF534793|pid:none) Gonatodes daudini voucher JB 38 re... 35 7.3
(Q54S31) RecName: Full=Peroxisome biogenesis factor 10; AltName:... 35 7.3
AK313861_1(AK313861|pid:none) Homo sapiens cDNA, FLJ94493, highl... 35 7.3
BC093450_1(BC093450|pid:none) Xenopus tropicalis Cas-Br-M (murin... 35 7.3
EF534794_1(EF534794|pid:none) Gonatodes annularis recombination ... 35 7.3
AY893013_1(AY893013|pid:none) Synthetic construct Homo sapiens c... 35 7.3
DQ492552_1(DQ492552|pid:none) Bagarius yarrelli voucher INHS 936... 35 7.3
(Q7ZVG6) RecName: Full=E3 ubiquitin-protein ligase Siah1; ... 35 7.3
(Q96EP1) RecName: Full=E3 ubiquitin-protein ligase CHFR; ... 35 7.3
(Q3UDK1) RecName: Full=TRAF-type zinc finger domain-containing p... 35 7.3
AK027687_1(AK027687|pid:none) Homo sapiens cDNA FLJ14781 fis, cl... 35 7.3
FJ571632_1(FJ571632|pid:none) Aprasia inaurita recombination act... 35 7.3
AK094663_1(AK094663|pid:none) Homo sapiens cDNA FLJ37344 fis, cl... 35 7.3
AK077629_1(AK077629|pid:none) Mus musculus 8 days embryo whole b... 35 7.3
FN318084_1(FN318084|pid:none) Schistosoma japonicum isolate Anhu... 35 7.3
AY687903_1(AY687903|pid:none) Cyclanorbis senegalensis recombina... 35 9.5
BT001981_1(BT001981|pid:none) Arabidopsis thaliana expressed pro... 35 9.5
DQ865908_1(DQ865908|pid:none) Micoureus demerarae recombination ... 35 9.5
BC085671_1(BC085671|pid:none) Danio rerio zgc:92560, mRNA (cDNA ... 35 9.5
AY687912_1(AY687912|pid:none) Geochelone pardalis recombination ... 35 9.5
FJ230871_1(FJ230871|pid:none) Pelodiscus sinensis recombination ... 35 9.5
AY687909_1(AY687909|pid:none) Staurotypus triporcatus recombinat... 35 9.5
EF490738_1(EF490738|pid:none) Uroplatus giganteus voucher ZSM 26... 35 9.5
EF490721_1(EF490721|pid:none) Paroedura androyensis voucher ZCMV... 35 9.5
BC150167_1(BC150167|pid:none) Danio rerio ligand of numb-protein... 35 9.5
BT069607_1(BT069607|pid:none) Zea mays full-length cDNA clone ZM... 35 9.5
EU219404_1(EU219404|pid:none) Rattus norvegicus strain ACI ligan... 35 9.5
EF534792_1(EF534792|pid:none) Coleodactylus brachystoma voucher ... 35 9.5
T31548(T31548)hypothetical protein Y47D3A.22 - Caenorhabditis el... 35 9.5
DQ275456_1(DQ275456|pid:none) Tarentola annularis recombination ... 35 9.5
AL035476_30(AL035476|pid:none) Plasmodium falciparum MAL4P3. &A... 35 9.5
CR855498_1(CR855498|pid:none) Xenopus tropicalis finished cDNA, ... 35 9.5
EU054230_1(EU054230|pid:none) Blaesodactylus antongilensis vouch... 35 9.5
DQ492628_1(DQ492628|pid:none) Pimelodella cristata voucher INHS ... 35 9.5
EU268300_1(EU268300|pid:none) Hemidactylus mabouia voucher MCZ R... 35 9.5
BX842655_45(BX842655|pid:none) Bdellovibrio bacteriovorus comple... 35 9.5
EU293633_1(EU293633|pid:none) Phyllopezus maranjonensis isolate ... 35 9.5
DQ492593_1(DQ492593|pid:none) Horabagrus brachysoma voucher INHS... 35 9.5
EU293635_1(EU293635|pid:none) Phyllopezus pollicaris isolate MZU... 35 9.5
EU189947_1(EU189947|pid:none) Medicago truncatula SINA3 mRNA, co... 35 9.5
DQ865915_1(DQ865915|pid:none) Philander frenata recombination ac... 35 9.5
AY687911_1(AY687911|pid:none) Sternotherus odoratus recombinatio... 35 9.5
EU054227_1(EU054227|pid:none) Blaesodactylus sakalava voucher WR... 35 9.5
DQ492627_1(DQ492627|pid:none) Pimelodus ornatus voucher INHS 491... 35 9.5
BC127510_1(BC127510|pid:none) Rattus norvegicus RAD18 homolog (S... 35 9.5
DQ865917_1(DQ865917|pid:none) Philander opossum recombination ac... 35 9.5
FJ156085_1(FJ156085|pid:none) Danio rerio ligand of numb-protein... 35 9.5
FJ039975_1(FJ039975|pid:none) Eretmochelys imbricata isolate EI_... 35 9.5
FJ571636_1(FJ571636|pid:none) Delma petersoni recombination acti... 35 9.5
DQ492584_1(DQ492584|pid:none) Hara sp. ANSP 182781 recombination... 35 9.5
DQ865889_1(DQ865889|pid:none) Didelphis marsupialis recombinatio... 35 9.5
DQ865897_1(DQ865897|pid:none) Marmosa lepida recombination activ... 35 9.5
EU219405_1(EU219405|pid:none) Rattus norvegicus strain BN ligand... 35 9.5
>AC117075_2(AC117075|pid:none) Dictyostelium discoideum chromosome 2
map 5201047-5455781 strain AX4, complete sequence.
Length = 530
Score = 110 bits (275), Expect = 2e-22
Identities = 63/203 (31%), Positives = 97/203 (47%), Gaps = 9/203 (4%)
Frame = +1
Query: 94 NDDFICVICSHLQVD--------IYQCVEGHFACKNCFLKMIELKKQCMTCRCEIKSIES 249
+D+F C IC L + QC+ GH C C+ ++E+K +C TCR +I+S+ +
Sbjct: 30 SDNFKCQICEGLLISSLIPNRMKALQCINGHCFCLTCWESILEIKSECPTCRIQIQSMNT 89
Query: 250 LSKNRYLEKEVRK-LNIYCPNSFSDLKNSIKDENACKDIITIEGLETHLKNCKFTLXXXX 426
LS N ++ K + + + I+CPN + + NS + N CK+IITI+ ++ H C+F
Sbjct: 90 LSNNLFIIKSISESIKIHCPN-YLNFDNS-NNFNGCKEIITIDEIDRHESKCEFRFIKCS 147
Query: 427 XXXXXXXXXXXXXXLKIRQGEFDHHLKECPNSLIKCEHCSIEITRSKQTDHIENHCLKVL 606
IR E D H +C + KC HC + + HI CLKVL
Sbjct: 148 INNQCNEI--------IRFNERDKHESQCDFIIQKCTHCDESVQMKQMQGHILFECLKVL 199
Query: 607 KQCEFCFKLIERGEFNNHQDTIC 675
C+ C R + NH + C
Sbjct: 200 ITCQHCSLQFTRLKLQNHIENHC 222
Score = 100 bits (248), Expect = 2e-19
Identities = 56/176 (31%), Positives = 87/176 (49%), Gaps = 1/176 (0%)
Frame = +3
Query: 678 CFLKMIELKKQCMTCRCEIKSIESLSKNRYLEKEVRK-LNIYCPNSFSDLKNSIKDENAC 854
C+ ++E+K +C TCR +I+S+ +LS N ++ K + + + I+CPN + + NS + N C
Sbjct: 66 CWESILEIKSECPTCRIQIQSMNTLSNNLFIIKSISESIKIHCPN-YLNFDNS-NNFNGC 123
Query: 855 KDIITIEGLETHLKNCKFTLXXXXXXXXXXXXXXXXXXLKIRQGEFDHHLKECPNSLIKC 1034
K+IITI+ ++ H C+F IR E D H +C + KC
Sbjct: 124 KEIITIDEIDRHESKCEFRFIKCSINNQCNEI--------IRFNERDKHESQCDFIIQKC 175
Query: 1035 EHCSIEITRSKQTDHIENHCLKVLKQCEFCFKLIERGEFNNHQDTICLSKLIKCPF 1202
HC + + HI CLKVL C+ C R + NH + C I+CPF
Sbjct: 176 THCDESVQMKQMQGHILFECLKVLITCQHCSLQFTRLKLQNHIENHCKEIKIECPF 231
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3236559
Number of Hits to DB: 2,283,103,445
Number of extensions: 39873666
Number of successful extensions: 113639
Number of sequences better than 10.0: 434
Number of HSP's gapped: 113242
Number of HSP's successfully gapped: 577
Length of query: 626
Length of database: 1,051,180,864
Length adjustment: 135
Effective length of query: 491
Effective length of database: 614,245,399
Effective search space: 301594490909
Effective search space used: 301594490909
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)
|
| PSORT |
|
| VS (DIR, S) |
0 |
| VH (FL, L) |
0 |
| VF (FL, S) |
3 |
| AH (FL, L) |
0 |
| AF (FL, S) |
0 |
| SL (DIR, L) |
0 |
| SS (DIR, S) |
0 |
| SH (FL, L) |
0 |
| SF (FL, S) |
2 |
| CH (FL, L) |
0 |
| CF (FL, S) |
0 |
| FCL (DIR, L) |
0 |
| FC (DIR, S) |
0 |
| FC-IC (SUB) |
0 |