| Contig-U15184-1 |
| Contig ID |
Contig-U15184-1 |
| Contig update |
2004. 6.11 |
| Contig sequence |
 |
| Gap |
no gap |
| Contig length |
849 |
| Chromosome number (1..6, M) |
M |
| Chromosome length |
55569 |
| Start point |
53057 |
| End point |
53773 |
| Strand (PLUS/MINUS) |
PLUS |
| Number of clones |
3 |
| Number of EST |
3 |
| Link to clone list |
U15184 |
| List of clone(s) |
|
| Translated Amino Acid sequence |
|
| Translated Amino Acid sequence (All Frames) |
|
| own update |
2004. 6.23 |
| Homology vs CSM-cDNA |
|
| dna update |
2009. 1.15 |
| Homology vs DNA |
Query= Contig-U15184-1 (Contig-U15184-1Q) /CSM_Contig/Contig-U15184-1Q.Seq.d
(849 letters)
Database: ddbj_B
98,226,423 sequences; 98,766,808,389 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value N
(AU272023) Dictyostelium discoideum gamete cDNA clone:FC-IC0... 317 0.0 5
(AF155828) Dictyostelium discoideum NADH dehydrogenase subun... 317 0.0 5
(AU284646) Dictyostelium discoideum gamete cDNA clone:FC-BG0... 345 0.0 3
(AB000109) Dictyostelium discoideum mitochondrial DNA, compl... 317 0.0 5
(AU263181) Dictyostelium discoideum vegetative cDNA clone:VS... 317 e-176 3
(AU263177) Dictyostelium discoideum vegetative cDNA clone:VS... 317 e-176 3
(AU261930) Dictyostelium discoideum vegetative cDNA clone:VS... 309 e-174 3
(AY894719) Dictyostelium discoideum clone ssa unknown mRNA; ... 299 e-113 3
(AU261779) Dictyostelium discoideum vegetative cDNA clone:VS... 317 e-109 4
(AU261533) Dictyostelium discoideum vegetative cDNA clone:VS... 317 2e-97 3
(AU261514) Dictyostelium discoideum vegetative cDNA clone:VS... 317 2e-97 3
(AU266621) Dictyostelium discoideum vegetative cDNA clone:VS... 262 8e-82 3
(AU266640) Dictyostelium discoideum vegetative cDNA clone:VS... 307 4e-79 1
(U25143) Dictyostelium discoideum cAMP-inducible prespore pr... 260 8e-65 1
(AU073530) Dictyostelium discoideum slug cDNA, clone SSH469. 260 8e-65 1
(AU060079) Dictyostelium discoideum slug cDNA, clone SLA143. 260 8e-65 1
(BJ409684) Dictyostelium discoideum cDNA clone:dds42l21, 3' ... 260 8e-65 1
(BJ408975) Dictyostelium discoideum cDNA clone:dds47h18, 3' ... 260 8e-65 1
(BJ406692) Dictyostelium discoideum cDNA clone:dds36k01, 3' ... 260 8e-65 1
(BJ405036) Dictyostelium discoideum cDNA clone:dds30l09, 3' ... 260 8e-65 1
(BJ403876) Dictyostelium discoideum cDNA clone:dds26g17, 3' ... 260 8e-65 1
(BJ403577) Dictyostelium discoideum cDNA clone:dds25g16, 3' ... 260 8e-65 1
(BJ403512) Dictyostelium discoideum cDNA clone:dds25j11, 3' ... 260 8e-65 1
(BJ402012) Dictyostelium discoideum cDNA clone:dds20l04, 3' ... 260 8e-65 1
(BJ400024) Dictyostelium discoideum cDNA clone:dds8c16, 3' e... 260 8e-65 1
(BJ391299) Dictyostelium discoideum cDNA clone:dds13g04, 5' ... 260 8e-65 1
(BJ388556) Dictyostelium discoideum cDNA clone:dds6l02, 5' e... 260 8e-65 1
(BJ387684) Dictyostelium discoideum cDNA clone:dds4o02, 5' e... 260 8e-65 1
(BJ387415) Dictyostelium discoideum cDNA clone:dds2l09, 5' e... 260 8e-65 1
(BJ387075) Dictyostelium discoideum cDNA clone:dds12a11, 5' ... 260 8e-65 1
(BJ387029) Dictyostelium discoideum cDNA clone:dds12a01, 5' ... 260 8e-65 1
(BJ386712) Dictyostelium discoideum cDNA clone:dds10b07, 5' ... 260 8e-65 1
(BJ385869) Dictyostelium discoideum cDNA clone:ddc56m07, 3' ... 260 8e-65 1
(BJ385332) Dictyostelium discoideum cDNA clone:ddc54i17, 3' ... 260 8e-65 1
(BJ385263) Dictyostelium discoideum cDNA clone:ddc54j09, 3' ... 260 8e-65 1
(BJ385062) Dictyostelium discoideum cDNA clone:ddc51n13, 3' ... 260 8e-65 1
(BJ385049) Dictyostelium discoideum cDNA clone:ddc51k14, 3' ... 260 8e-65 1
(BJ385026) Dictyostelium discoideum cDNA clone:ddc51f14, 3' ... 260 8e-65 1
(BJ384905) Dictyostelium discoideum cDNA clone:ddc51l04, 3' ... 260 8e-65 1
(BJ384679) Dictyostelium discoideum cDNA clone:ddc50h08, 3' ... 260 8e-65 1
(BJ384621) Dictyostelium discoideum cDNA clone:ddc50j05, 3' ... 260 8e-65 1
(BJ384522) Dictyostelium discoideum cDNA clone:ddc49d20, 3' ... 260 8e-65 1
(BJ384520) Dictyostelium discoideum cDNA clone:ddc49c21, 3' ... 260 8e-65 1
(BJ384413) Dictyostelium discoideum cDNA clone:ddc49j08, 3' ... 260 8e-65 1
(BJ384395) Dictyostelium discoideum cDNA clone:ddc49e11, 3' ... 260 8e-65 1
(BJ384357) Dictyostelium discoideum cDNA clone:ddc49m01, 3' ... 260 8e-65 1
(BJ384355) Dictyostelium discoideum cDNA clone:ddc49l05, 3' ... 260 8e-65 1
(BJ383444) Dictyostelium discoideum cDNA clone:ddc53e02, 3' ... 260 8e-65 1
(BJ382866) Dictyostelium discoideum cDNA clone:ddc46k02, 3' ... 260 8e-65 1
(BJ382636) Dictyostelium discoideum cDNA clone:ddc45l07, 3' ... 260 8e-65 1
(BJ382553) Dictyostelium discoideum cDNA clone:ddc45j01, 3' ... 260 8e-65 1
(BJ380678) Dictyostelium discoideum cDNA clone:ddc38o19, 3' ... 260 8e-65 1
(BJ379771) Dictyostelium discoideum cDNA clone:ddc35n22, 3' ... 260 8e-65 1
(BJ379345) Dictyostelium discoideum cDNA clone:ddc34f15, 3' ... 260 8e-65 1
(BJ379286) Dictyostelium discoideum cDNA clone:ddc34h12, 3' ... 260 8e-65 1
(BJ379053) Dictyostelium discoideum cDNA clone:ddc33j18, 3' ... 260 8e-65 1
(BJ372064) Dictyostelium discoideum cDNA clone:ddc11j04, 3' ... 260 8e-65 1
(BJ359741) Dictyostelium discoideum cDNA clone:ddc2c08, 5' e... 260 8e-65 1
(BJ354503) Dictyostelium discoideum cDNA clone:dda53g23, 3' ... 260 8e-65 1
(BJ353876) Dictyostelium discoideum cDNA clone:dda51p15, 3' ... 260 8e-65 1
(BJ353756) Dictyostelium discoideum cDNA clone:dda51g11, 3' ... 260 8e-65 1
(BJ353594) Dictyostelium discoideum cDNA clone:dda50e20, 3' ... 260 8e-65 1
(BJ352770) Dictyostelium discoideum cDNA clone:dda47j19, 3' ... 260 8e-65 1
(BJ352428) Dictyostelium discoideum cDNA clone:dda46p14, 3' ... 260 8e-65 1
(BJ352303) Dictyostelium discoideum cDNA clone:dda46f08, 3' ... 260 8e-65 1
(BJ351542) Dictyostelium discoideum cDNA clone:dda43g23, 3' ... 260 8e-65 1
(BJ349924) Dictyostelium discoideum cDNA clone:dda38h04, 3' ... 260 8e-65 1
(BJ348468) Dictyostelium discoideum cDNA clone:dda33g11, 3' ... 260 8e-65 1
(BJ348037) Dictyostelium discoideum cDNA clone:dda32a04, 3' ... 260 8e-65 1
(BJ346357) Dictyostelium discoideum cDNA clone:dda30m13, 3' ... 260 8e-65 1
(BJ335994) Dictyostelium discoideum cDNA clone:dda52g09, 5' ... 260 8e-65 1
(BJ403660) Dictyostelium discoideum cDNA clone:dds25i21, 3' ... 258 3e-64 1
(BJ384398) Dictyostelium discoideum cDNA clone:ddc49f08, 3' ... 258 3e-64 1
(AU261376) Dictyostelium discoideum vegetative cDNA clone:VS... 256 1e-63 1
(BJ352329) Dictyostelium discoideum cDNA clone:dda46l07, 3' ... 256 1e-63 1
(BJ387573) Dictyostelium discoideum cDNA clone:dds3a16, 5' e... 254 5e-63 1
(BJ382367) Dictyostelium discoideum cDNA clone:ddc44c14, 3' ... 254 5e-63 1
(BJ355152) Dictyostelium discoideum cDNA clone:dda55l22, 3' ... 254 5e-63 1
(BJ349125) Dictyostelium discoideum cDNA clone:dda35p09, 3' ... 254 5e-63 1
(BJ325274) Dictyostelium discoideum cDNA clone:dda13i15, 5' ... 254 5e-63 1
(BJ394231) Dictyostelium discoideum cDNA clone:dds34h07, 5' ... 252 2e-62 1
(BJ389650) Dictyostelium discoideum cDNA clone:dds19f17, 5' ... 252 2e-62 1
(AU263483) Dictyostelium discoideum vegetative cDNA clone:VS... 250 8e-62 1
(BJ380907) Dictyostelium discoideum cDNA clone:ddc39o17, 3' ... 250 8e-62 1
(BJ349175) Dictyostelium discoideum cDNA clone:dda35k18, 3' ... 250 8e-62 1
(BJ404672) Dictyostelium discoideum cDNA clone:dds29c08, 3' ... 248 3e-61 1
(BJ409267) Dictyostelium discoideum cDNA clone:dds40p09, 3' ... 244 5e-60 1
(DQ336395) Dictyostelium citrinum mitochondrion, complete ge... 172 7e-59 3
(BJ386548) Dictyostelium discoideum cDNA clone:ddc58i15, 3' ... 236 1e-57 1
(AU263484) Dictyostelium discoideum vegetative cDNA clone:VS... 228 5e-56 2
(AU270113) Dictyostelium discoideum vegetative cDNA clone:VS... 226 1e-54 1
(BJ348313) Dictyostelium discoideum cDNA clone:dda32h21, 3' ... 226 1e-54 1
(BJ404715) Dictyostelium discoideum cDNA clone:dds29l11, 3' ... 222 2e-53 1
(BJ380422) Dictyostelium discoideum cDNA clone:ddc38i01, 3' ... 222 2e-53 1
(BJ378791) Dictyostelium discoideum cDNA clone:ddc32h23, 3' ... 216 1e-51 1
(BJ406698) Dictyostelium discoideum cDNA clone:dds36l02, 3' ... 214 4e-51 1
(BJ385770) Dictyostelium discoideum cDNA clone:ddc56g05, 3' ... 214 4e-51 1
(BJ382259) Dictyostelium discoideum cDNA clone:ddc44l01, 3' ... 214 4e-51 1
(BJ403875) Dictyostelium discoideum cDNA clone:dds26g16, 3' ... 210 7e-50 1
(BJ386101) Dictyostelium discoideum cDNA clone:ddc57l02, 3' ... 121 7e-50 2
>(AU272023) Dictyostelium discoideum gamete cDNA clone:FC-IC0976, 5'
end single read.
Length = 687
Score = 317 bits (160), Expect(5) = 0.0
Identities = 160/160 (100%)
Strand = Plus / Plus
Query: 386 agtagatatggtattattacgaagtggttttgtaagaagtctgtatgaagcgagacaaat 445
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 386 agtagatatggtattattacgaagtggttttgtaagaagtctgtatgaagcgagacaaat 445
Query: 446 aataaatcataaacatcttttagtgaatggaaaaatcgcaagcttacctggatatatgat 505
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 446 aataaatcataaacatcttttagtgaatggaaaaatcgcaagcttacctggatatatgat 505
Query: 506 aaatgtaggtgatattattagttttaaagaagggagcatg 545
||||||||||||||||||||||||||||||||||||||||
Sbjct: 506 aaatgtaggtgatattattagttttaaagaagggagcatg 545
Score = 289 bits (146), Expect(5) = 0.0
Identities = 146/146 (100%)
Strand = Plus / Plus
Query: 1 caacaagttgaaattgctttagagaatgaaagactttatcttcaagaagttgaagatgtt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 caacaagttgaaattgctttagagaatgaaagactttatcttcaagaagttgaagatgtt 60
Query: 61 ccagagagactatacgaagaaattcataattccaatttgaataaagcagttcaagaggct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ccagagagactatacgaagaaattcataattccaatttgaataaagcagttcaagaggct 120
Query: 121 gaagaaattgaaagacaacttatacg 146
||||||||||||||||||||||||||
Sbjct: 121 gaagaaattgaaagacaacttatacg 146
Score = 71.9 bits (36), Expect(5) = 0.0
Identities = 36/36 (100%)
Strand = Plus / Plus
Query: 606 atggacaaaccgaaactttaaatttaagccgatttc 641
||||||||||||||||||||||||||||||||||||
Sbjct: 606 atggacaaaccgaaactttaaatttaagccgatttc 641
Score = 61.9 bits (31), Expect(5) = 0.0
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 163 gaatcttatcattattgtttcgtataggtgg 193
|||||||||||||||||||||||||||||||
Sbjct: 163 gaatcttatcattattgtttcgtataggtgg 193
Score = 42.1 bits (21), Expect(5) = 0.0
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 243 cagcaagaaccttttacacag 263
|||||||||||||||||||||
Sbjct: 243 cagcaagaaccttttacacag 263
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Number of Sequences: 98226423
Number of Hits to DB: 714,468,294
Number of extensions: 44734286
Number of successful extensions: 3741882
Number of sequences better than 10.0: 1158
Length of query: 849
Length of database: 98,766,808,389
Length adjustment: 24
Effective length of query: 825
Effective length of database: 100,704,341,533
Effective search space: 83081081764725
Effective search space used: 83081081764725
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)
|
| protein update |
2009. 7.15 |
| Homology vs Protein |
Query= Contig-U15184-1 (Contig-U15184-1Q) /CSM_Contig/Contig-U15184-1Q.Seq.d
(849 letters)
Database: nrp_B
3,236,559 sequences; 1,051,180,864 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
(Q9XPI8) RecName: Full=Ribosomal protein S4, mitochondrial; &AB... 170 2e-56
(P54682) RecName: Full=cAMP-inducible prespore protein D7; Flags... 91 5e-17
(A9KJG7) RecName: Full=30S ribosomal protein S4; &CP000885_3596... 67 1e-09
(Q97J08) RecName: Full=Putative 30S ribosomal protein S4 B; &AE... 66 2e-09
CP001107_424(CP001107|pid:none) Eubacterium rectale ATCC 33656, ... 65 2e-09
(B3Q7H1) RecName: Full=30S ribosomal protein S4; &(Q6N9G0) RecN... 65 3e-09
(A7HM25) RecName: Full=30S ribosomal protein S4; &CP000771_1085... 65 4e-09
AF295546_15(AF295546|pid:none) Malawimonas jakobiformis mitochon... 65 4e-09
AY188276_1(AY188276|pid:none) Thuja plicata small ribosomal prot... 64 5e-09
AY212292_1(AY212292|pid:none) Passiflora haematostigma ribosomal... 64 5e-09
(A9BFZ1) RecName: Full=30S ribosomal protein S4; &CP000879_738(... 64 5e-09
AY212307_1(AY212307|pid:none) Passiflora mansoi ribosomal protei... 64 5e-09
AY188279_1(AY188279|pid:none) Juniperus communis small ribosomal... 64 6e-09
EU002371_1(EU002371|pid:none) Thymelaea hirsuta ribosomal protei... 64 6e-09
(Q1IS94) RecName: Full=30S ribosomal protein S4; &CP000360_1251... 64 8e-09
AY188280_1(AY188280|pid:none) Juniperus sabina small ribosomal p... 64 8e-09
CP001114_2056(CP001114|pid:none) Deinococcus deserti VCD115, com... 64 8e-09
EU849490_27(EU849490|pid:none) Gonystylus bancanus chloroplast, ... 63 1e-08
(Q2S936) RecName: Full=30S ribosomal protein S4; &CP000155_5919... 63 1e-08
(Q13A88) RecName: Full=30S ribosomal protein S4; &CP000283_1761... 63 1e-08
(B6JDU6) RecName: Full=30S ribosomal protein S4; &CP001196_1438... 63 1e-08
(Q8R7Y1) RecName: Full=30S ribosomal protein S4; &AE008691_2091... 63 1e-08
(Q2GFT0) RecName: Full=30S ribosomal protein S4; &CP000236_868(... 63 1e-08
X84131_1(X84131|pid:none) Luzula sylvatica cloroplast rps4 gene ... 63 1e-08
(Q0BUS6) RecName: Full=30S ribosomal protein S4; 63 1e-08
(B2V7I6) RecName: Full=30S ribosomal protein S4; &CP001080_257(... 63 1e-08
(A0L5Z7) RecName: Full=30S ribosomal protein S4; &CP000471_861(... 63 1e-08
CP000394_528(CP000394|pid:none) Granulibacter bethesdensis CGDNI... 63 1e-08
(Q3YSR0) RecName: Full=30S ribosomal protein S4; &CP000107_194(... 63 1e-08
CP001230_1198(CP001230|pid:none) Persephonella marina EX-H1, com... 62 2e-08
AY188257_1(AY188257|pid:none) Microstrobos fitzgeraldii small ri... 62 2e-08
CP000962_3400(CP000962|pid:none) Clostridium botulinum A3 str. L... 62 2e-08
CP001229_1680(CP001229|pid:none) Sulfurihydrogenibium azorense A... 62 2e-08
(A8MI45) RecName: Full=30S ribosomal protein S4 B; &CP000853_19... 62 2e-08
AM398040_1(AM398040|pid:none) Vincetoxicum nigrum chloroplast pa... 62 2e-08
CP001102_154(CP001102|pid:none) Candidatus Amoebophilus asiaticu... 62 2e-08
CP001280_102(CP001280|pid:none) Methylocella silvestris BL2, com... 62 2e-08
(Q21M34) RecName: Full=30S ribosomal protein S4; &CP000282_981(... 62 2e-08
AY212298_1(AY212298|pid:none) Passiflora sidifolia ribosomal pro... 62 3e-08
(Q3B6D7) RecName: Full=30S ribosomal protein S4; &CP000096_202(... 62 3e-08
AY212301_1(AY212301|pid:none) Passiflora actinia ribosomal prote... 62 3e-08
AY212291_1(AY212291|pid:none) Passiflora foetida ribosomal prote... 62 3e-08
EU002302_1(EU002302|pid:none) Capparis flexuosa ribosomal protei... 62 3e-08
CP001097_2119(CP001097|pid:none) Chlorobium limicola DSM 245, co... 62 3e-08
AY212294_1(AY212294|pid:none) Passiflora caerulea ribosomal prot... 62 3e-08
EU002313_1(EU002313|pid:none) Crypteronia paniculata ribosomal p... 62 3e-08
(Q2ITR6) RecName: Full=30S ribosomal protein S4; &CP000250_3682... 62 3e-08
AM398206_1(AM398206|pid:none) Shepherdia sp. IND chloroplast par... 62 3e-08
DQ238764_1(DQ238764|pid:none) Passiflora incarnata x Passiflora ... 62 3e-08
(Q1GES7) RecName: Full=30S ribosomal protein S4; &CP000377_2106... 62 3e-08
EU002304_1(EU002304|pid:none) Ceanothus prostratus ribosomal pro... 62 3e-08
(Q9MTP1) RecName: Full=30S ribosomal protein S4, chloroplastic; ... 62 3e-08
EU002329_1(EU002329|pid:none) Hua gabonii ribosomal protein S4 (... 62 3e-08
AY212319_1(AY212319|pid:none) Passiflora gabrielliana ribosomal ... 62 3e-08
(P26866) RecName: Full=Ribosomal protein S4, mitochondrial; &M6... 62 3e-08
(A4SCT5) RecName: Full=30S ribosomal protein S4; &CP000607_265(... 62 3e-08
AY212303_1(AY212303|pid:none) Passiflora edmundoi ribosomal prot... 62 3e-08
DQ400350_24(DQ400350|pid:none) Lemna minor chloroplast, complete... 62 3e-08
(Q5LNM2) RecName: Full=30S ribosomal protein S4; &CP000031_3111... 62 3e-08
(Q9RSJ7) RecName: Full=30S ribosomal protein S4; &AE000513_2083... 61 4e-08
AY188249_1(AY188249|pid:none) Podocarpus henkelii small ribosoma... 61 4e-08
CP001083_3545(CP001083|pid:none) Clostridium botulinum Ba4 str. ... 61 4e-08
CP000463_1619(CP000463|pid:none) Rhodopseudomonas palustris BisA... 61 4e-08
AY188277_1(AY188277|pid:none) Thujopsis dolabrata small ribosoma... 61 4e-08
AY188255_1(AY188255|pid:none) Dacrydium cupressinum small riboso... 61 4e-08
AY188248_1(AY188248|pid:none) Nageia nagi small ribosomal protei... 61 4e-08
(Q09X15) RecName: Full=30S ribosomal protein S4, chloroplastic; ... 61 4e-08
(A6MMK9) RecName: Full=30S ribosomal protein S4, chloroplastic; ... 61 4e-08
(P0C486) RecName: Full=30S ribosomal protein S4, chloroplastic; ... 61 4e-08
EU002316_1(EU002316|pid:none) Drypetes roxburghii ribosomal prot... 61 4e-08
EU002290_1(EU002290|pid:none) Anisoptera marginata ribosomal pro... 61 4e-08
X84125_1(X84125|pid:none) Dioscorea batatas cloroplast rps4 gene... 61 4e-08
(Q07R54) RecName: Full=30S ribosomal protein S4; 61 4e-08
(Q4VZH3) RecName: Full=30S ribosomal protein S4, chloroplastic; ... 61 5e-08
AY216662_1(AY216662|pid:none) Tetrastylis ovalis ribosomal prote... 61 5e-08
EU002340_1(EU002340|pid:none) Leonia glycycarpa ribosomal protei... 61 5e-08
CU469464_310(CU469464|pid:none) Candidatus Phytoplasma mali stra... 61 5e-08
EU002365_1(EU002365|pid:none) Strasburgeria robusta ribosomal pr... 61 5e-08
(Q218M1) RecName: Full=30S ribosomal protein S4; &CP000301_1586... 61 5e-08
X84136_1(X84136|pid:none) Oncidium ansiferum cloroplast rps4 gen... 61 5e-08
EU002319_1(EU002319|pid:none) Elatine triandra ribosomal protein... 61 5e-08
EU002297_1(EU002297|pid:none) Brexia madagascariensis ribosomal ... 61 5e-08
(Q1H2K1) RecName: Full=30S ribosomal protein S4; &CP000284_1015... 61 5e-08
AY188274_1(AY188274|pid:none) Taiwania cryptomerioides small rib... 61 5e-08
EU002326_1(EU002326|pid:none) Helianthemum grandiflorum ribosoma... 61 5e-08
EU002362_1(EU002362|pid:none) Spiraea tomentosa ribosomal protei... 61 5e-08
CP000943_2121(CP000943|pid:none) Methylobacterium sp. 4-46, comp... 61 5e-08
EU002321_1(EU002321|pid:none) Euonymus americanus ribosomal prot... 61 5e-08
(P36470) RecName: Full=30S ribosomal protein S4, chloroplastic; ... 61 5e-08
(A4GG95) RecName: Full=30S ribosomal protein S4, chloroplastic; ... 61 5e-08
X84124_1(X84124|pid:none) Dioscorea balcanica cloroplast rps4 ge... 61 5e-08
AY212322_1(AY212322|pid:none) Passiflora quadrangularis ribosoma... 61 5e-08
EU002322_1(EU002322|pid:none) Ficus sp. Moore 315 ribosomal prot... 61 5e-08
EU002328_1(EU002328|pid:none) Hirtella bicornis ribosomal protei... 60 7e-08
EU002358_1(EU002358|pid:none) Quillaja saponaria ribosomal prote... 60 7e-08
EU002292_1(EU002292|pid:none) Atuna racemosa ribosomal protein S... 60 7e-08
EU002342_1(EU002342|pid:none) Lythrum flagellare ribosomal prote... 60 7e-08
(A6W368) RecName: Full=30S ribosomal protein S4; &CP000749_4204... 60 7e-08
(A7Y3D8) RecName: Full=30S ribosomal protein S4, chloroplastic; ... 60 7e-08
EU002345_1(EU002345|pid:none) Morella cerifera ribosomal protein... 60 7e-08
EU002347_1(EU002347|pid:none) Neurada procumbens ribosomal prote... 60 7e-08
EU849487_21(EU849487|pid:none) Trifolium subterraneum chloroplas... 60 7e-08
EU002337_1(EU002337|pid:none) Juglans nigra ribosomal protein S4... 60 7e-08
(Q2PMU5) RecName: Full=30S ribosomal protein S4, chloroplastic; ... 60 7e-08
(Q89ID3) RecName: Full=30S ribosomal protein S4; &BA000040_5706... 60 7e-08
AM398041_1(AM398041|pid:none) Vinca major chloroplast partial mR... 60 7e-08
(O20291) RecName: Full=30S ribosomal protein S4, chloroplastic; ... 60 7e-08
AJ409050_1(AJ409050|pid:none) Kabuyea hostifolia chloroplast par... 60 7e-08
EU002349_1(EU002349|pid:none) Ochna mossambicensis ribosomal pro... 60 7e-08
(Q06FV8) RecName: Full=30S ribosomal protein S4, chloroplastic; ... 60 7e-08
(B5ZC02) RecName: Full=30S ribosomal protein S4; &CP001184_529(... 60 7e-08
AB428629_1(AB428629|pid:none) Petunia integrifolia chloroplast r... 60 7e-08
AY188240_1(AY188240|pid:none) Pterocarya stenoptera small riboso... 60 7e-08
(Q33C33) RecName: Full=30S ribosomal protein S4, chloroplastic; ... 60 7e-08
EU002307_1(EU002307|pid:none) Clidemia dentata ribosomal protein... 60 7e-08
(P06359) RecName: Full=30S ribosomal protein S4, chloroplastic; ... 60 7e-08
(Q8S8X2) RecName: Full=30S ribosomal protein S4, chloroplastic; ... 60 7e-08
CU466930_1058(CU466930|pid:none) Candidatus Cloacamonas acidamin... 60 7e-08
(Q0TMU2) RecName: Full=30S ribosomal protein S4 B; &CP000246_25... 60 7e-08
AJ577240_1(AJ577240|pid:none) Onira unguiculata plastid partial ... 60 7e-08
EU002289_1(EU002289|pid:none) Alnus viridis subsp. sinuata ribos... 60 7e-08
EU002351_1(EU002351|pid:none) Parnassia palustris ribosomal prot... 60 7e-08
CP000923_872(CP000923|pid:none) Thermoanaerobacter sp. X514, com... 60 7e-08
(Q31IV9) RecName: Full=30S ribosomal protein S4; &CP000109_317(... 60 7e-08
EU002314_1(EU002314|pid:none) Cupaniopsis anacardioides ribosoma... 60 9e-08
AY331863_1(AY331863|pid:none) Thibaudia parvifolia tRNA-Thr (trn... 60 9e-08
AY188273_1(AY188273|pid:none) Athrotaxis selaginoides small ribo... 60 9e-08
X84108_1(X84108|pid:none) Aechmea galbata cloroplast rps4 gene f... 60 9e-08
(O20231) RecName: Full=30S ribosomal protein S4, chloroplastic; ... 60 9e-08
(A8LK98) RecName: Full=30S ribosomal protein S4; &CP000830_2932... 60 9e-08
AY188272_1(AY188272|pid:none) Cryptomeria japonica small ribosom... 60 9e-08
(O20235) RecName: Full=30S ribosomal protein S4, chloroplastic; ... 60 9e-08
EU002300_1(EU002300|pid:none) Bursera simaruba ribosomal protein... 60 9e-08
X84132_1(X84132|pid:none) Musa sapientum cloroplast rps4 gene fo... 60 9e-08
AY331847_1(AY331847|pid:none) Semiramisia speciosa tRNA-Thr (trn... 60 9e-08
EU002359_1(EU002359|pid:none) Reseda lutea ribosomal protein S4 ... 60 9e-08
EU002288_1(EU002288|pid:none) Albizia julibrissin ribosomal prot... 60 9e-08
AJ409034_1(AJ409034|pid:none) Ennealophus euryandrus chloroplast... 60 9e-08
EU002368_1(EU002368|pid:none) Swietenia macrophylla ribosomal pr... 60 9e-08
AJ409047_1(AJ409047|pid:none) Klattia flava chloroplast partial ... 60 9e-08
CP001581_3634(CP001581|pid:none) Clostridium botulinum A2 str. K... 60 9e-08
FM253418_1(FM253418|pid:none) Iris humilis chloroplast partial r... 60 9e-08
(P56799) RecName: Full=30S ribosomal protein S4, chloroplastic; ... 60 9e-08
AY268081_17(AY268081|pid:none) Candidatus Portiera aleyrodidarum... 60 9e-08
AP009377_47(AP009377|pid:none) Cryptomeria japonica chloroplast ... 60 9e-08
(O20236) RecName: Full=30S ribosomal protein S4, chloroplastic; ... 60 9e-08
AC183493_32(AC183493|pid:none) Brassica oleracea Contig B, compl... 60 9e-08
AY331823_1(AY331823|pid:none) Disterigma pernettyoides tRNA-Thr ... 60 9e-08
(O36051) RecName: Full=30S ribosomal protein S4, chloroplastic; ... 60 9e-08
AY331833_1(AY331833|pid:none) Psammisia sodiroi tRNA-Thr (trnT) ... 60 9e-08
EU002303_1(EU002303|pid:none) Carica papaya ribosomal protein S4... 60 9e-08
(A4QKJ4) RecName: Full=30S ribosomal protein S4, chloroplastic; ... 60 9e-08
(A4QKA7) RecName: Full=30S ribosomal protein S4, chloroplastic; ... 60 9e-08
EF207542_1(EF207542|pid:none) Heuchera micrantha ribosomal prote... 60 9e-08
AM398058_1(AM398058|pid:none) Trithrinax brasiliensis chloroplas... 60 9e-08
(O20106) RecName: Full=30S ribosomal protein S4, chloroplastic; ... 60 9e-08
(A4QKT3) RecName: Full=30S ribosomal protein S4, chloroplastic; ... 60 9e-08
AJ409044_1(AJ409044|pid:none) Gynandriris sisyrinchium chloropla... 60 9e-08
(O47029) RecName: Full=30S ribosomal protein S4, chloroplastic; ... 60 9e-08
EU002287_1(EU002287|pid:none) Ailanthus altissima ribosomal prot... 60 9e-08
AY331838_1(AY331838|pid:none) Satyria grandifolia tRNA-Thr (trnT... 60 9e-08
AY188270_1(AY188270|pid:none) Taxodium distichum small ribosomal... 60 9e-08
AY331830_1(AY331830|pid:none) Polyclita turbinata tRNA-Thr (trnT... 60 9e-08
EU002348_1(EU002348|pid:none) Nitraria retusa ribosomal protein ... 60 9e-08
AY331855_1(AY331855|pid:none) Thibaudia densiflora trnT-rps4 int... 60 9e-08
AY331853_1(AY331853|pid:none) Themistoclesia epiphytica tRNA-Thr... 60 9e-08
DQ069455_1(DQ069455|pid:none) Typha latifolia ribosomal protein ... 60 9e-08
(O36057) RecName: Full=30S ribosomal protein S4, chloroplastic; ... 60 9e-08
(A0A337) RecName: Full=30S ribosomal protein S4, chloroplastic; ... 60 9e-08
AY331858_1(AY331858|pid:none) Thibaudia inflata tRNA-Thr (trnT) ... 60 9e-08
AY331843_1(AY331843|pid:none) Satyria sp. EAP-2003 tRNA-Thr (trn... 60 9e-08
AM398057_1(AM398057|pid:none) Sabal minor chloroplast partial mR... 60 9e-08
X84111_1(X84111|pid:none) Alisma plantago-aquatica cloroplast rp... 60 9e-08
EU002317_1(EU002317|pid:none) Elaeagnus sp. Nickrent 2898 riboso... 60 9e-08
EF207546_1(EF207546|pid:none) Myriophyllum sp. Broch s.n. riboso... 60 9e-08
AJ409049_1(AJ409049|pid:none) Tecophilaea cyanocrocus chloroplas... 60 9e-08
EU002361_1(EU002361|pid:none) Schinus terebinthifolius ribosomal... 60 9e-08
(Q1QMT5) RecName: Full=30S ribosomal protein S4; &CP000319_1560... 60 9e-08
AY188268_1(AY188268|pid:none) Metasequoia glyptostroboides small... 60 9e-08
AY331860_1(AY331860|pid:none) Thibaudia macrocalyx tRNA-Thr (trn... 60 9e-08
AJ409038_1(AJ409038|pid:none) Solenomelus pedunculatus chloropla... 60 9e-08
(P69629) RecName: Full=30S ribosomal protein S4, chloroplastic; ... 60 9e-08
(Q6KIM1) RecName: Full=30S ribosomal protein S4; &AE017308_69(A... 60 9e-08
AJ409027_1(AJ409027|pid:none) Gelasine elongata chloroplast part... 60 9e-08
AY331848_1(AY331848|pid:none) Sphyrospermum buxifolium tRNA-Thr ... 60 9e-08
FM253394_1(FM253394|pid:none) Iris vorobievii chloroplast partia... 60 9e-08
AY331857_1(AY331857|pid:none) Thibaudia floribunda tRNA-Thr (trn... 60 9e-08
AY331812_1(AY331812|pid:none) Cavendishia complectens tRNA-Thr (... 60 9e-08
(A6MM38) RecName: Full=30S ribosomal protein S4, chloroplastic; ... 60 9e-08
(O47026) RecName: Full=30S ribosomal protein S4, chloroplastic; ... 60 9e-08
DQ069456_1(DQ069456|pid:none) Yucca schidigera ribosomal protein... 60 9e-08
AJ409037_1(AJ409037|pid:none) Olsynium filifolium chloroplast pa... 60 9e-08
EU431223_24(EU431223|pid:none) Carica papaya chloroplast, comple... 60 9e-08
(P36461) RecName: Full=30S ribosomal protein S4, chloroplastic; ... 60 9e-08
X84123_1(X84123|pid:none) Delphinium staphisagria cloroplast rps... 60 1e-07
(A5IMB0) RecName: Full=30S ribosomal protein S4; &CP000702_1304... 60 1e-07
AJ409042_1(AJ409042|pid:none) Herbertia pulchella chloroplast pa... 60 1e-07
(A0ZZ37) RecName: Full=30S ribosomal protein S4, chloroplastic; ... 60 1e-07
DQ317996_1(DQ317996|pid:none) Pterostyrax psilophyllus rps4 gene... 60 1e-07
AY188267_1(AY188267|pid:none) Sequoiadendron giganteum small rib... 60 1e-07
AM398047_1(AM398047|pid:none) Fontanesia phillyreoides subsp. fo... 60 1e-07
AM398048_1(AM398048|pid:none) Fraxinus excelsior chloroplast par... 60 1e-07
(Q3V532) RecName: Full=30S ribosomal protein S4, chloroplastic; ... 60 1e-07
(A7M968) RecName: Full=Plastid 30S ribosomal protein S4; &AM711... 60 1e-07
X84138_1(X84138|pid:none) Potamogeton crispus cloroplast rps4 ge... 60 1e-07
(A7HWA8) RecName: Full=30S ribosomal protein S4; &CP000774_2568... 60 1e-07
(B7IHX2) RecName: Full=30S ribosomal protein S4; &CP001185_1211... 60 1e-07
AM398043_1(AM398043|pid:none) Scrophularia vernalis chloroplast ... 60 1e-07
(Q01WB9) RecName: Full=30S ribosomal protein S4; &CP000473_5030... 60 1e-07
EU002343_1(EU002343|pid:none) Manihot esculenta ribosomal protei... 60 1e-07
AY188254_1(AY188254|pid:none) Afrocarpus falcatus small ribosoma... 60 1e-07
AM398045_1(AM398045|pid:none) Abeliophyllum distichum chloroplas... 60 1e-07
(O20208) RecName: Full=30S ribosomal protein S4, chloroplastic; ... 60 1e-07
EU002344_1(EU002344|pid:none) Melianthus comosus ribosomal prote... 60 1e-07
EU016760_1(EU016760|pid:none) Anethum graveolens ribosomal prote... 59 2e-07
AF491040_1(AF491040|pid:none) Breutelia arundinifolia small ribo... 59 2e-07
CP001016_1238(CP001016|pid:none) Beijerinckia indica subsp. indi... 59 2e-07
CP000030_204(CP000030|pid:none) Anaplasma marginale str. St. Mar... 59 2e-07
AY188246_1(AY188246|pid:none) Welwitschia mirabilis small riboso... 59 2e-07
EU002355_1(EU002355|pid:none) Polygala cruciata ribosomal protei... 59 2e-07
EU922089_1(EU922089|pid:none) Erodium chrysanthum ribosomal prot... 59 2e-07
CP000884_1044(CP000884|pid:none) Delftia acidovorans SPH-1, comp... 59 2e-07
AY188237_1(AY188237|pid:none) Saxifraga stolonifera small riboso... 59 2e-07
(O19990) RecName: Full=30S ribosomal protein S4, chloroplastic; ... 59 2e-07
(Q7NQH6) RecName: Full=30S ribosomal protein S4; &AE016825_4161... 59 2e-07
EU922591_1(EU922591|pid:none) Pelargonium cotyledonis ribosomal ... 59 2e-07
AY331861_1(AY331861|pid:none) Thibaudia martiniana tRNA-Thr (trn... 59 2e-07
(Q72NI7) RecName: Full=30S ribosomal protein S4; &(Q9XD10) RecN... 59 2e-07
AM398055_1(AM398055|pid:none) Syringa vulgaris chloroplast parti... 59 2e-07
EF207553_1(EF207553|pid:none) Saxifraga stolonifera ribosomal pr... 59 2e-07
X84117_1(X84117|pid:none) Butomus umbellatus cloroplast rps4 gen... 59 2e-07
CP001618_2000(CP001618|pid:none) Beutenbergia cavernae DSM 12333... 59 2e-07
AM398054_1(AM398054|pid:none) Ligustrum ovalifolium chloroplast ... 59 2e-07
EF207531_1(EF207531|pid:none) Paeonia brownii ribosomal protein ... 59 2e-07
EU922304_1(EU922304|pid:none) Geranium macrorrhizum ribosomal pr... 59 2e-07
EU002370_1(EU002370|pid:none) Terminalia catappa ribosomal prote... 59 2e-07
AY331829_1(AY331829|pid:none) Macleania insignis tRNA-Thr (trnT)... 59 2e-07
(Q9X1I3) RecName: Full=30S ribosomal protein S4; &AE000512_1447... 59 2e-07
AP009568_69(AP009568|pid:none) Welwitschia mirabilis chloroplast... 59 2e-07
(O20221) RecName: Full=30S ribosomal protein S4, chloroplastic; ... 59 2e-07
EF207532_1(EF207532|pid:none) Altingia excelsa ribosomal protein... 59 2e-07
(O20278) RecName: Full=30S ribosomal protein S4, chloroplastic; ... 59 2e-07
X84135_1(X84135|pid:none) Nelumbo nucifera cloroplast rps4 gene ... 59 2e-07
(Q97IP6) RecName: Full=Putative 30S ribosomal protein S4 C; &AE... 59 2e-07
(O36054) RecName: Full=30S ribosomal protein S4, chloroplastic; ... 59 2e-07
DQ069454_1(DQ069454|pid:none) Ranunculus macranthus ribosomal pr... 59 2e-07
AY700145_27(AY700145|pid:none) Polysphondylium pallidum mitochon... 59 2e-07
(Q0G9W0) RecName: Full=30S ribosomal protein S4, chloroplastic; ... 59 2e-07
(P69642) RecName: Full=30S ribosomal protein S4, chloroplastic; ... 59 2e-07
(P36466) RecName: Full=30S ribosomal protein S4, chloroplastic; ... 59 2e-07
AY188244_1(AY188244|pid:none) Cornus kousa small ribosomal prote... 59 2e-07
AJ409028_1(AJ409028|pid:none) Tritonia disticha chloroplast part... 59 2e-07
(Q1IFU2) RecName: Full=30S ribosomal protein S4; &CT573326_463(... 59 2e-07
(A4YRT2) RecName: Full=30S ribosomal protein S4; &CU234118_2635... 59 2e-07
AM941384_1(AM941384|pid:none) Syringodea unifolia plastid partia... 59 2e-07
AY188232_1(AY188232|pid:none) Nandina domestica small ribosomal ... 59 2e-07
AY188233_1(AY188233|pid:none) Magnolia stellata small ribosomal ... 59 2e-07
X84134_1(X84134|pid:none) Nardus stricta cloroplast rps4 gene fo... 59 2e-07
(A8SEA5) RecName: Full=30S ribosomal protein S4, chloroplastic; ... 59 2e-07
(Q09G44) RecName: Full=30S ribosomal protein S4, chloroplastic; ... 59 2e-07
AJ409024_1(AJ409024|pid:none) Schizostylis coccinea chloroplast ... 59 2e-07
(A1E9J3) RecName: Full=30S ribosomal protein S4, chloroplastic; ... 59 2e-07
(Q04PW4) RecName: Full=30S ribosomal protein S4; &(Q055B8) RecN... 59 2e-07
(P69639) RecName: Full=30S ribosomal protein S4, chloroplastic; ... 59 2e-07
AB490196_1(AB490196|pid:none) Cercidiphyllum japonicum chloropla... 59 2e-07
(A1EA10) RecName: Full=30S ribosomal protein S4, chloroplastic; ... 59 2e-07
(A4QJK1) RecName: Full=30S ribosomal protein S4, chloroplastic; ... 59 2e-07
EU002372_1(EU002372|pid:none) Trochodendron aralioides ribosomal... 59 2e-07
AJ409019_1(AJ409019|pid:none) Hesperantha pseudopilosa chloropla... 59 2e-07
CP001098_142(CP001098|pid:none) Halothermothrix orenii H 168, co... 59 2e-07
AJ409029_1(AJ409029|pid:none) Geissorhiza heterostyla chloroplas... 59 2e-07
CP001336_446(CP001336|pid:none) Desulfitobacterium hafniense DCB... 59 2e-07
(B3CP11) RecName: Full=30S ribosomal protein S4; &AM999887_229(... 59 2e-07
EU325680_23(EU325680|pid:none) Brachypodium distachyon cultivar ... 59 2e-07
EF207541_1(EF207541|pid:none) Hamamelis japonica ribosomal prote... 59 2e-07
AJ409015_1(AJ409015|pid:none) Watsonia angusta chloroplast parti... 59 2e-07
(P48133) RecName: Full=Cyanelle 30S ribosomal protein S4; &T069... 59 2e-07
AJ409022_1(AJ409022|pid:none) Chasmanthe aethiopica chloroplast ... 59 2e-07
EU002295_1(EU002295|pid:none) Berberidopsis corallina ribosomal ... 59 2e-07
(P36459) RecName: Full=30S ribosomal protein S4, chloroplastic; ... 59 2e-07
(A4QL21) RecName: Full=30S ribosomal protein S4, chloroplastic; ... 59 2e-07
CP000930_1358(CP000930|pid:none) Heliobacterium modesticaldum Ic... 59 2e-07
EF207543_1(EF207543|pid:none) Itea virginica ribosomal protein S... 59 2e-07
AJ409023_1(AJ409023|pid:none) Tritoniopsis unguicularis chloropl... 59 2e-07
AY331824_1(AY331824|pid:none) Disterigma rimbachii tRNA-Thr (trn... 59 2e-07
(O20219) RecName: Full=30S ribosomal protein S4, chloroplastic; ... 59 2e-07
(P69630) RecName: Full=30S ribosomal protein S4, chloroplastic; ... 59 2e-07
X84110_1(X84110|pid:none) Agropyron repens cloroplast rps4 gene ... 59 2e-07
(P69635) RecName: Full=30S ribosomal protein S4, chloroplastic; ... 59 2e-07
(Q06GZ5) RecName: Full=30S ribosomal protein S4, chloroplastic; ... 59 2e-07
(P36464) RecName: Full=30S ribosomal protein S4, chloroplastic; ... 59 2e-07
(P36465) RecName: Full=30S ribosomal protein S4, chloroplastic; ... 59 2e-07
EU002311_1(EU002311|pid:none) Cornus florida ribosomal protein S... 59 2e-07
(Q7YJX0) RecName: Full=30S ribosomal protein S4, chloroplastic; ... 59 2e-07
AJ577241_1(AJ577241|pid:none) Cyanixia socotrana plastid partial... 59 2e-07
AJ577244_1(AJ577244|pid:none) Duthiastrum linifolium plastid par... 59 2e-07
AE014184_378(AE014184|pid:none) Tropheryma whipplei str. Twist, ... 59 3e-07
(A1E9S6) RecName: Full=30S ribosomal protein S4, chloroplastic; ... 59 3e-07
AJ617675_1(AJ617675|pid:none) Andreaea rupestris chloroplast par... 59 3e-07
(Q0ZJ18) RecName: Full=30S ribosomal protein S4, chloroplastic; ... 59 3e-07
AF321760_1(AF321760|pid:none) Jamesonia imbricata isolate Jimb32... 59 3e-07
X84130_1(X84130|pid:none) Laurus nobilis cloroplast rps4 gene fo... 59 3e-07
AF321766_1(AF321766|pid:none) Jamesonia brasiliensis isolate Jbr... 59 3e-07
(P69631) RecName: Full=30S ribosomal protein S4, chloroplastic; ... 59 3e-07
AF321710_1(AF321710|pid:none) Eriosorus flexuosus isolate Eflex1... 59 3e-07
EU002366_1(EU002366|pid:none) Stylobasium spathulatum ribosomal ... 59 3e-07
EF207552_1(EF207552|pid:none) Saxifraga integrifolia ribosomal p... 59 3e-07
DQ972894_1(DQ972894|pid:none) Piper darienense voucher SA003 sma... 59 3e-07
AY462395_1(AY462395|pid:none) Schistochila laminigera small ribo... 59 3e-07
DQ399604_1(DQ399604|pid:none) Campylostelium strictum voucher BC... 59 3e-07
(Q9BBT5) RecName: Full=30S ribosomal protein S4, chloroplastic; ... 59 3e-07
(A1S242) RecName: Full=30S ribosomal protein S4; &CP000507_236(... 59 3e-07
(A1KB02) RecName: Full=30S ribosomal protein S4; 59 3e-07
AF321748_1(AF321748|pid:none) Jamesonia alstonii isolate Jalst09... 59 3e-07
EF207544_1(EF207544|pid:none) Kalanchoe daigremontiana ribosomal... 59 3e-07
AF321754_1(AF321754|pid:none) Jamesonia scammanae isolate JscB30... 59 3e-07
(A0LIL6) RecName: Full=30S ribosomal protein S4; &CP000478_1564... 59 3e-07
X84112_1(X84112|pid:none) Alstroemeria aurantiaca cloroplast rps... 59 3e-07
EF207554_1(EF207554|pid:none) Sedum rubrotinctum ribosomal prote... 59 3e-07
EU002298_1(EU002298|pid:none) Bruguiera gymnorhiza ribosomal pro... 59 3e-07
EU002354_1(EU002354|pid:none) Plumbago auriculata ribosomal prot... 59 3e-07
AY188278_1(AY188278|pid:none) Platycladus orientalis small ribos... 59 3e-07
EU002346_1(EU002346|pid:none) Myrtus communis ribosomal protein ... 59 3e-07
CP001110_289(CP001110|pid:none) Pelodictyon phaeoclathratiforme ... 59 3e-07
AY188241_1(AY188241|pid:none) Eucalyptus globulus small ribosoma... 59 3e-07
AY188238_1(AY188238|pid:none) Viburnum betulifolium small riboso... 59 3e-07
AF321742_1(AF321742|pid:none) Jamesonia canescens isolate Jcane3... 59 3e-07
AF321746_1(AF321746|pid:none) Jamesonia pulchra isolate Jpulc06 ... 59 3e-07
(P59129) RecName: Full=30S ribosomal protein S4; &AE006470_2134... 59 3e-07
AF321767_1(AF321767|pid:none) Jamesonia imbricata isolate Jimbi1... 59 3e-07
(P36467) RecName: Full=30S ribosomal protein S4, chloroplastic; ... 59 3e-07
CP001614_820(CP001614|pid:none) Teredinibacter turnerae T7901, c... 59 3e-07
(P30056) RecName: Full=Plastid 30S ribosomal protein S4; &M8188... 59 3e-07
AY188236_1(AY188236|pid:none) Sassafras albidum small ribosomal ... 59 3e-07
AY462338_1(AY462338|pid:none) Aphanolejeunea gracilis small ribo... 59 3e-07
AF321740_1(AF321740|pid:none) Jamesonia bogotensis isolate Jbogo... 59 3e-07
EU002308_1(EU002308|pid:none) Clusia rosea ribosomal protein S4 ... 59 3e-07
(Q06RC7) RecName: Full=30S ribosomal protein S4, chloroplastic; ... 58 3e-07
AY950356_1(AY950356|pid:none) Eucladium verticillatum voucher BM... 58 3e-07
CP000859_732(CP000859|pid:none) Desulfococcus oleovorans Hxd3, c... 58 3e-07
(Q2SSN9) RecName: Full=30S ribosomal protein S4; &CP000123_224(... 58 3e-07
(A3N381) RecName: Full=30S ribosomal protein S4; &CP000569_1759... 58 3e-07
DQ908932_1(DQ908932|pid:none) Phyllostachys pubescens ribosomal ... 58 3e-07
AY591467_1(AY591467|pid:none) Ephedra rupestris ribosomal protei... 58 3e-07
(A6LLP0) RecName: Full=30S ribosomal protein S4; &CP000716_959(... 58 3e-07
(Q7VKF7) RecName: Full=30S ribosomal protein S4; &AE017143_1648... 58 3e-07
AY591459_1(AY591459|pid:none) Ephedra viridis ribosomal protein ... 58 3e-07
DQ972896_1(DQ972896|pid:none) Piper divaricatum voucher VG099 sm... 58 3e-07
DQ972917_1(DQ972917|pid:none) Piper ossanum voucher UC056 small ... 58 3e-07
(Q9A5D9) RecName: Full=30S ribosomal protein S4; &AE005673_2494... 58 3e-07
AY591477_1(AY591477|pid:none) Ephedra fragilis ribosomal protein... 58 3e-07
DQ972900_1(DQ972900|pid:none) Piper glabrescens voucher PR007 sm... 58 3e-07
AP010819_11(AP010819|pid:none) Ephedra equisetina chloroplast DN... 58 3e-07
(P36472) RecName: Full=30S ribosomal protein S4, chloroplastic; ... 58 3e-07
AY591448_1(AY591448|pid:none) Ephedra strobilacea ribosomal prot... 58 3e-07
AF231285_1(AF231285|pid:none) Leucoloma rutenbergii small riboso... 58 3e-07
AY591449_1(AY591449|pid:none) Ephedra regeliana ribosomal protei... 58 3e-07
AY591466_1(AY591466|pid:none) Ephedra rupestris ribosomal protei... 58 3e-07
EF053216_1(EF053216|pid:none) Ephedra major isolate 526 small ri... 58 3e-07
AY591480_1(AY591480|pid:none) Ephedra distachya subsp. helvetica... 58 3e-07
(Q6H9L1) RecName: Full=30S ribosomal protein S4, chloroplastic; ... 58 3e-07
AY591438_1(AY591438|pid:none) Ephedra aphylla ribosomal protein ... 58 3e-07
EU002291_1(EU002291|pid:none) Aphloia theiformis ribosomal prote... 58 3e-07
(A1BA23) RecName: Full=30S ribosomal protein S4; &CP000490_1451... 58 3e-07
EU002364_1(EU002364|pid:none) Staphylea colchica ribosomal prote... 58 3e-07
EU922448_1(EU922448|pid:none) Monsonia speciosa ribosomal protei... 58 3e-07
EU002312_1(EU002312|pid:none) Crossosoma californicum ribosomal ... 58 3e-07
AY591454_1(AY591454|pid:none) Ephedra funerea ribosomal protein ... 58 3e-07
DQ779224_1(DQ779224|pid:none) Equisetum hyemale ribosomal protei... 58 3e-07
DQ972902_1(DQ972902|pid:none) Piper hispidum voucher PR006 small... 58 3e-07
AY591451_1(AY591451|pid:none) Ephedra nevadensis ribosomal prote... 58 3e-07
AY188247_1(AY188247|pid:none) Ephedra chilensis small ribosomal ... 58 3e-07
AY591446_1(AY591446|pid:none) Ephedra sinica ribosomal protein s... 58 3e-07
(B6EPU8) RecName: Full=30S ribosomal protein S4; &FM178379_343(... 58 3e-07
AY591443_1(AY591443|pid:none) Ephedra monosperma ribosomal prote... 58 3e-07
(B7J4A3) RecName: Full=30S ribosomal protein S4; &CP001132_515(... 58 3e-07
EU002374_1(EU002374|pid:none) Urtica urens ribosomal protein S4 ... 58 3e-07
AY591437_1(AY591437|pid:none) Ephedra laristanica ribosomal prot... 58 3e-07
(Q0G9L7) RecName: Full=30S ribosomal protein S4, chloroplastic; ... 58 3e-07
AY591463_1(AY591463|pid:none) Ephedra ochreata ribosomal protein... 58 3e-07
AY591458_1(AY591458|pid:none) Ephedra californica ribosomal prot... 58 3e-07
AY608109_1(AY608109|pid:none) Schistochila lehmanniana small rib... 58 3e-07
AJ409032_1(AJ409032|pid:none) Cipura campanulata chloroplast par... 58 3e-07
DQ972895_1(DQ972895|pid:none) Piper dilatatum voucher SA002 smal... 58 3e-07
(Q6MTW7) RecName: Full=30S ribosomal protein S4; &BX293980_266(... 58 3e-07
AY591441_1(AY591441|pid:none) Ephedra distachya ribosomal protei... 58 3e-07
EU002306_1(EU002306|pid:none) Cephalotus follicularis ribosomal ... 58 3e-07
AY591444_1(AY591444|pid:none) Ephedra somalensis ribosomal prote... 58 3e-07
(Q119M5) RecName: Full=30S ribosomal protein S4; &CP000393_269(... 58 3e-07
FJ859351_23(FJ859351|pid:none) Micromonas sp. RCC299 mitochondri... 58 3e-07
EF207537_1(EF207537|pid:none) Crassula aff. perforata Fishbein 3... 58 3e-07
DQ317995_1(DQ317995|pid:none) Sinojackia sarcocarpa rps4 gene, p... 58 4e-07
DQ972903_1(DQ972903|pid:none) Piper hongkongense voucher VG105 s... 58 4e-07
DQ317997_1(DQ317997|pid:none) Sinojackia huangmeiensis rps4 gene... 58 4e-07
DQ478803_1(DQ478803|pid:none) Torreya grandis small ribosomal pr... 58 4e-07
DQ972909_1(DQ972909|pid:none) Piper marginatum voucher SA004 sma... 58 4e-07
(Q6A6R0) RecName: Full=30S ribosomal protein S4; &AE017283_1788... 58 4e-07
(Q6H9K2) RecName: Full=30S ribosomal protein S4, chloroplastic; ... 58 4e-07
DQ972918_1(DQ972918|pid:none) Piper pendulispicum voucher VG095 ... 58 4e-07
EU221623_1(EU221623|pid:none) Silene integripetala ribosomal pro... 58 4e-07
AY631155_1(AY631155|pid:none) Mittenia plumula ribosomal protein... 58 4e-07
AJ409021_1(AJ409021|pid:none) Anomatheca laxa chloroplast partia... 58 4e-07
EU221619_1(EU221619|pid:none) Silene littorea ribosomal protein ... 58 4e-07
CP001393_1646(CP001393|pid:none) Anaerocellum thermophilum DSM 6... 58 4e-07
EU002286_1(EU002286|pid:none) Picramnia polyantha ribosomal prot... 58 4e-07
AY608066_1(AY608066|pid:none) Haplomitrium blumei small ribosoma... 58 4e-07
AY331811_1(AY331811|pid:none) Cavendishia capitulata tRNA-Thr (t... 58 4e-07
DQ972889_1(DQ972889|pid:none) Piper aequale voucher SA005 small ... 58 4e-07
(A3DA48) RecName: Full=30S ribosomal protein S4; &(A6WHV2) RecN... 58 4e-07
AF231898_1(AF231898|pid:none) Equisetum bogotense small ribosoma... 58 4e-07
AY908164_1(AY908164|pid:none) Dicranoweisia crispula isolate SB1... 58 4e-07
DQ972913_1(DQ972913|pid:none) Piper muricatum voucher VG103 smal... 58 4e-07
DQ972891_1(DQ972891|pid:none) Piper argyrophyllum voucher VG093 ... 58 4e-07
AJ577243_1(AJ577243|pid:none) Devia xeromorpha plastid partial r... 58 4e-07
EU221638_1(EU221638|pid:none) Petrocoptis pyrenaica ribosomal pr... 58 4e-07
EU221630_1(EU221630|pid:none) Silene pseudoatocion ribosomal pro... 58 4e-07
(Q12ST5) RecName: Full=30S ribosomal protein S4; &CP000302_194(... 58 4e-07
EU002367_1(EU002367|pid:none) Suriana maritima ribosomal protein... 58 4e-07
(Q21QP8) RecName: Full=30S ribosomal protein S4; &CP000267_4143... 58 4e-07
AF478264_1(AF478264|pid:none) Diphyscium foliosum ribosomal prot... 58 4e-07
AJ554000_1(AJ554000|pid:none) Kiaeria glacialis chloroplast part... 58 4e-07
DQ972893_1(DQ972893|pid:none) Piper cordulatum voucher SA001 sma... 58 4e-07
AY331865_1(AY331865|pid:none) Vaccinium poasanum tRNA-Thr (trnT)... 58 4e-07
CP001279_1634(CP001279|pid:none) Nautilia profundicola AmH, comp... 58 4e-07
(B2KEJ4) RecName: Full=30S ribosomal protein S4; &CP001055_1372... 58 4e-07
EU221620_1(EU221620|pid:none) Silene uniflora ribosomal protein ... 58 4e-07
AY212314_1(AY212314|pid:none) Passiflora morifolia ribosomal pro... 58 4e-07
EU439173_1(EU439173|pid:none) Equisetum ramosissimum subsp. debi... 58 4e-07
CP001001_1708(CP001001|pid:none) Methylobacterium radiotolerans ... 58 4e-07
AF321736_1(AF321736|pid:none) Eriosorus sp. Sanchez-Baracado 329... 58 4e-07
CP001472_1357(CP001472|pid:none) Acidobacterium capsulatum ATCC ... 58 4e-07
AJ409043_1(AJ409043|pid:none) Pardanthopsis dichotoma chloroplas... 58 4e-07
AJ845228_1(AJ845228|pid:none) Grimmia meridionalis chloroplast p... 58 4e-07
DQ972890_1(DQ972890|pid:none) Piper amalago voucher PR003 small ... 58 4e-07
EU221624_1(EU221624|pid:none) Silene conica ribosomal protein S4... 58 4e-07
EU221621_1(EU221621|pid:none) Silene zawadskii ribosomal protein... 58 4e-07
AJ577242_1(AJ577242|pid:none) Crocosmia mathewsiana plastid part... 58 4e-07
EU221618_1(EU221618|pid:none) Silene samia ribosomal protein S4 ... 58 4e-07
DQ238544_1(DQ238544|pid:none) Calymperes couguiense isolate 112 ... 58 4e-07
AY507443_1(AY507443|pid:none) Haplomitrium blumei small ribosoma... 58 4e-07
(A7N0H7) RecName: Full=30S ribosomal protein S4; &(Q87SZ1) RecN... 58 4e-07
CP001108_1982(CP001108|pid:none) Prosthecochloris aestuarii DSM ... 58 4e-07
AY331851_1(AY331851|pid:none) Symphysia racemosa tRNA-Thr (trnT)... 58 4e-07
AY908614_1(AY908614|pid:none) Desmotheca apiculata isolate BG123... 58 4e-07
EU002335_1(EU002335|pid:none) Ixerba brexioides ribosomal protei... 58 4e-07
X84116_1(X84116|pid:none) Bambusa oldhamii cloroplast rps4 gene ... 58 4e-07
DQ779225_1(DQ779225|pid:none) Equisetum laevigatum ribosomal pro... 58 4e-07
(O20215) RecName: Full=30S ribosomal protein S4, chloroplastic; ... 58 4e-07
AF321712_1(AF321712|pid:none) Eriosorus flexuosus isolate Efle46... 58 4e-07
AF226746_1(AF226746|pid:none) Calymperes tuamotuense small ribos... 58 4e-07
DQ972905_1(DQ972905|pid:none) Piper khasianum voucher AC003 smal... 58 4e-07
AY608106_1(AY608106|pid:none) Riccardia sp. Davis 151 small ribo... 58 4e-07
AF223058_1(AF223058|pid:none) Splachnobryum obtusum rps4 (rps4) ... 58 4e-07
EU221631_1(EU221631|pid:none) Silene schafta ribosomal protein S... 58 4e-07
AY331831_1(AY331831|pid:none) Psammisia dolichopoda tRNA-Thr (tr... 58 4e-07
AY462381_1(AY462381|pid:none) Paraschistochila tuloides small ri... 58 4e-07
CP001130_290(CP001130|pid:none) Hydrogenobaculum sp. Y04AAS1, co... 58 4e-07
(Q6H9L0) RecName: Full=30S ribosomal protein S4, chloroplastic; ... 58 4e-07
AM398264_1(AM398264|pid:none) Riccardia capensis chloroplast rps... 57 6e-07
AJ580812_1(AJ580812|pid:none) Melasphaerula ramosa plastid parti... 57 6e-07
DQ026602_1(DQ026602|pid:none) Gyrothyra underwoodiana small ribo... 57 6e-07
(P36473) RecName: Full=30S ribosomal protein S4, chloroplastic; ... 57 6e-07
AY331849_1(AY331849|pid:none) Sphyrospermum ellipticum tRNA-Thr ... 57 6e-07
DQ972898_1(DQ972898|pid:none) Piper excelsum voucher VG0.3 small... 57 6e-07
EU002301_1(EU002301|pid:none) Cannabis sativa ribosomal protein ... 57 6e-07
(Q2GDI3) RecName: Full=30S ribosomal protein S4; &CP000237_560(... 57 6e-07
DQ972931_1(DQ972931|pid:none) Macropiper melanostachyum voucher ... 57 6e-07
AY908149_1(AY908149|pid:none) Exodictyon dentatum isolate MDP324... 57 6e-07
AJ553991_1(AJ553991|pid:none) Bryoxiphium japonicum chloroplast ... 57 6e-07
EU221632_1(EU221632|pid:none) Silene aegyptiaca ribosomal protei... 57 6e-07
AY188253_1(AY188253|pid:none) Lagarostrobos franklinii small rib... 57 6e-07
DQ220697_1(DQ220697|pid:none) Riccia ciliifera small ribosomal p... 57 6e-07
(Q28TU1) RecName: Full=30S ribosomal protein S4; &CP000264_954(... 57 6e-07
DQ972930_1(DQ972930|pid:none) Macropiper latifolium voucher VG02... 57 6e-07
AY188262_1(AY188262|pid:none) Sciadopitys verticillata small rib... 57 6e-07
DQ972928_1(DQ972928|pid:none) Piper wichmannii voucher VL155 sma... 57 6e-07
(O20264) RecName: Full=30S ribosomal protein S4, chloroplastic; ... 57 6e-07
DQ238770_1(DQ238770|pid:none) Passiflora coriacea Rps4 (rps4) ge... 57 6e-07
AJ845226_1(AJ845226|pid:none) Grimmia lisae chloroplast partial ... 57 6e-07
AY188265_1(AY188265|pid:none) Amentotaxus formosana small riboso... 57 6e-07
DQ972911_1(DQ972911|pid:none) Piper methysticum voucher VG016 sm... 57 6e-07
AY188258_1(AY188258|pid:none) Phyllocladus aspleniifolius small ... 57 6e-07
AY908116_1(AY908116|pid:none) Aulacopilum hodgkinsoniae isolate ... 57 6e-07
X84118_1(X84118|pid:none) Cocos nucifera cloroplast rps4 gene fo... 57 6e-07
AJ580811_1(AJ580811|pid:none) Dierama robustum plastid partial r... 57 6e-07
(P36456) RecName: Full=30S ribosomal protein S4, chloroplastic; ... 57 6e-07
AY908143_1(AY908143|pid:none) Pseudobraunia californica isolate ... 57 6e-07
AY188264_1(AY188264|pid:none) Cephalotaxus drupacea small riboso... 57 6e-07
DQ478797_1(DQ478797|pid:none) Amentotaxus argotaenia small ribos... 57 6e-07
DQ268992_1(DQ268992|pid:none) Riccardia multifida ribosomal prot... 57 6e-07
DQ972929_1(DQ972929|pid:none) Macropiper latifolium voucher VG00... 57 6e-07
AY908109_1(AY908109|pid:none) Holomitrium arboreum isolate MDP11... 57 6e-07
(Q6MJ35) RecName: Full=30S ribosomal protein S4 A; &BX842654_75... 57 6e-07
AY331825_1(AY331825|pid:none) Disterigma trimerum tRNA-Thr (trnT... 57 6e-07
(Q3IJJ5) RecName: Full=30S ribosomal protein S4; &CR954246_2730... 57 8e-07
AF231272_1(AF231272|pid:none) Dicranella heteromalla small ribos... 57 8e-07
AY618374_1(AY618374|pid:none) Leptodontiopsis fragilifolia small... 57 8e-07
(A7M903) RecName: Full=Plastid 30S ribosomal protein S4; &AM711... 57 8e-07
(A2BV69) RecName: Full=30S ribosomal protein S4; &CP000552_472(... 57 8e-07
EU275727_46(EU275727|pid:none) Dictyostelium fasciculatum strain... 57 8e-07
>(Q9XPI8) RecName: Full=Ribosomal protein S4, mitochondrial;
&AB000109_40(AB000109|pid:none) &T43785(T43785)
Length = 300
Score = 170 bits (430), Expect(2) = 2e-56
Identities = 93/128 (72%), Positives = 93/128 (72%)
Frame = +3
Query: 162 RILSLLFRIGGXXXXXXXXXXXXXXXXQQEPFTQNLTLHRLFRXXXXXXXXXXXXXXXXX 341
RILSLLFRIGG QQEPFTQNLTLHRLFR
Sbjct: 73 RILSLLFRIGGKIYRKKIKKKKINLKKQQEPFTQNLTLHRLFRKFYLNLKLKQFKLLYKK 132
Query: 342 XXGNEKVIIQQLEKRVDMVLLRSGFVRSLYEARQIINHKHLLVNGKIASLPGYMINVGDI 521
GNEKVIIQQLEKRVDMVLLRSGFVRSLYEARQIINHKHLLVNGKIASLPGYMINVGDI
Sbjct: 133 YKGNEKVIIQQLEKRVDMVLLRSGFVRSLYEARQIINHKHLLVNGKIASLPGYMINVGDI 192
Query: 522 ISFKEGSM 545
ISFKEGSM
Sbjct: 193 ISFKEGSM 200
Score = 73.2 bits (178), Expect(2) = 2e-56
Identities = 41/86 (47%), Positives = 41/86 (47%)
Frame = +2
Query: 590 KSQEKDGQTETLNLSRFQXXXXXXXXXXXXXXXXATGPTYXXXXXXXXXXXXXXXPKLTA 769
K K RFQ ATGP Y PKLTA
Sbjct: 215 KKSRKRWTNRNFKFKRFQNYKRKRQKKKNKNKVRATGPNYLEISHSLLLISLIEEPKLTA 274
Query: 770 IKYPFTLQPEKNIKFITLLKKYKRLR 847
IKYPFTLQPEKNIKFITLLKKYKRLR
Sbjct: 275 IKYPFTLQPEKNIKFITLLKKYKRLR 300
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3236559
Number of Hits to DB: 898,452,832
Number of extensions: 13464040
Number of successful extensions: 38126
Number of sequences better than 10.0: 2888
Number of HSP's gapped: 38120
Number of HSP's successfully gapped: 2889
Length of query: 283
Length of database: 1,051,180,864
Length adjustment: 127
Effective length of query: 156
Effective length of database: 640,137,871
Effective search space: 99861507876
Effective search space used: 99861507876
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)
|
| PSORT |
|
| VS (DIR, S) |
0 |
| VH (FL, L) |
0 |
| VF (FL, S) |
0 |
| AH (FL, L) |
0 |
| AF (FL, S) |
0 |
| SL (DIR, L) |
0 |
| SS (DIR, S) |
0 |
| SH (FL, L) |
0 |
| SF (FL, S) |
0 |
| CH (FL, L) |
0 |
| CF (FL, S) |
0 |
| FCL (DIR, L) |
0 |
| FC (DIR, S) |
2 |
| FC-IC (SUB) |
1 |