Contig-U15129-1 |
Contig ID |
Contig-U15129-1 |
Contig update |
2004. 6.11 |
Contig sequence |
|
Gap |
no gap |
Contig length |
646 |
Chromosome number (1..6, M) |
2 |
Chromosome length |
8467578 |
Start point |
7710800 |
End point |
7710155 |
Strand (PLUS/MINUS) |
MINUS |
Number of clones |
3 |
Number of EST |
3 |
Link to clone list |
U15129 |
List of clone(s) |
|
Translated Amino Acid sequence |
|
Translated Amino Acid sequence (All Frames) |
|
own update |
2004. 6.23 |
Homology vs CSM-cDNA |
|
dna update |
2009. 1.12 |
Homology vs DNA |
|
protein update |
2009. 7.15 |
Homology vs Protein |
Query= Contig-U15129-1 (Contig-U15129-1Q) /CSM_Contig/Contig-U15129-1Q.Seq.d (646 letters)
Database: nrp_B 3,236,559 sequences; 1,051,180,864 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
(Q86K64) RecName: Full=Probable 28S ribosomal protein S17, mitoc... 256 5e-67 CP001130_272(CP001130|pid:none) Hydrogenobaculum sp. Y04AAS1, co... 58 2e-07 (Q89A75) RecName: Full=30S ribosomal protein S17; &AE016826_420... 58 2e-07 T16978(T16978) ribosomal protein S17 - curled-leaved tobacco &Y... 56 1e-06 AC143338_5(AC143338|pid:none) Medicago truncatula clone mth2-8d1... 53 7e-06 CP001634_1845(CP001634|pid:none) Kosmotoga olearia TBF 19.5.1, c... 53 9e-06 (A0T0I8) RecName: Full=30S ribosomal protein S17, chloroplastic;... 52 1e-05 (Q493J9) RecName: Full=30S ribosomal protein S17; &CP000016_192... 52 1e-05 (B5Z8V8) RecName: Full=30S ribosomal protein S17; &(B6JNE8) Rec... 50 4e-05 (Q2IJ76) RecName: Full=30S ribosomal protein S17; &CP000251_193... 50 6e-05 (Q8K959) RecName: Full=30S ribosomal protein S17; &AE013218_467... 50 6e-05 (Q318J3) RecName: Full=30S ribosomal protein S17; &CP000111_179... 50 6e-05 (A6TEW3) RecName: Full=30S ribosomal protein S17; &AP006725_456... 50 6e-05 BT038312_1(BT038312|pid:none) Zea mays full-length cDNA clone ZM... 50 7e-05 (A2BYS7) RecName: Full=30S ribosomal protein S17; &CP000552_173... 50 7e-05 AK070753_1(AK070753|pid:none) Oryza sativa Japonica Group cDNA c... 50 7e-05 CP001277_1672(CP001277|pid:none) Candidatus Hamiltonella defensa... 49 1e-04 (Q6CZX9) RecName: Full=30S ribosomal protein S17; &BX950851_399... 49 1e-04 AP008971_164(AP008971|pid:none) Finegoldia magna ATCC 29328 DNA,... 49 1e-04 CP001279_1570(CP001279|pid:none) Nautilia profundicola AmH, comp... 49 1e-04 AK118396_1(AK118396|pid:none) Arabidopsis thaliana At3g18880 mRN... 49 1e-04 (A1AGK0) RecName: Full=30S ribosomal protein S17; &(A7MPH2) Rec... 49 1e-04 (O46903) RecName: Full=30S ribosomal protein S17, chloroplastic;... 49 1e-04 (Q11QC1) RecName: Full=30S ribosomal protein S17; &CP000383_310... 49 2e-04 (A5F557) RecName: Full=30S ribosomal protein S17; &(Q9KNZ3) Rec... 49 2e-04 (O66439) RecName: Full=30S ribosomal protein S17; &AE000657_12(... 49 2e-04 (Q7TU28) RecName: Full=30S ribosomal protein S17; &BX548174_179... 48 2e-04 (A5FZV6) RecName: Full=30S ribosomal protein S17; &CP000697_190... 48 2e-04 (A8GKI8) RecName: Full=30S ribosomal protein S17; &CP000826_451... 48 2e-04 (A1JS24) RecName: Full=30S ribosomal protein S17; &(A4TH01) Rec... 48 2e-04 CP001600_3451(CP001600|pid:none) Edwardsiella ictaluri 93-146, c... 48 2e-04 (B5YG38) RecName: Full=30S ribosomal protein S17; &CP001147_138... 48 3e-04 CP001575_19(CP001575|pid:none) Micromonas sp. RCC299 chromosome ... 48 3e-04 CR954215_245(CR954215|pid:none) Ostreococcus tauri strain OTTH05... 48 3e-04 (A8AQK7) RecName: Full=30S ribosomal protein S17; &CP000822_459... 48 3e-04 (B1GZ92) RecName: Full=30S ribosomal protein S17; &AP009510_91(... 48 3e-04 CP001089_1337(CP001089|pid:none) Geobacter lovleyi SZ, complete ... 48 3e-04 EU965865_1(EU965865|pid:none) Zea mays clone 289527 30S ribosoma... 48 3e-04 (P46175) RecName: Full=30S ribosomal protein S17; &D31786_4(D31... 47 4e-04 (Q0BYC3) RecName: Full=30S ribosomal protein S17; &CP000158_278... 47 4e-04 (P57582) RecName: Full=30S ribosomal protein S17; &BA000003_480... 47 4e-04 (A6Q1I7) RecName: Full=30S ribosomal protein S17; &AP009178_232... 47 5e-04 CU468135_3154(CU468135|pid:none) Erwinia tasmaniensis strain ET1... 47 5e-04 (Q8R7W3) RecName: Full=30S ribosomal protein S17; &AE008691_210... 47 6e-04 (A8ESV2) RecName: Full=30S ribosomal protein S17; &CP000361_741... 47 6e-04 CP001139_233(CP001139|pid:none) Vibrio fischeri MJ11 chromosome ... 47 6e-04 (A4WFB9) RecName: Full=30S ribosomal protein S17; &CP000653_370... 47 6e-04 (Q5E8A6) RecName: Full=30S ribosomal protein S17; &CP000020_239... 47 6e-04 (Q3API2) RecName: Full=30S ribosomal protein S17; &CP000108_181... 46 8e-04 CP000916_1002(CP000916|pid:none) Thermotoga neapolitana DSM 4359... 46 8e-04 EU964315_1(EU964315|pid:none) Zea mays clone 277911 30S ribosoma... 46 8e-04 (Q6LVA7) RecName: Full=30S ribosomal protein S17; &CR378663_313... 46 8e-04 (A0KF30) RecName: Full=30S ribosomal protein S17; &CP000462_299... 46 8e-04 CP001291_3619(CP001291|pid:none) Cyanothece sp. PCC 7424, comple... 46 8e-04 AP010904_1229(AP010904|pid:none) Desulfovibrio magneticus RS-1 D... 46 8e-04 EF084043_1(EF084043|pid:none) Picea sitchensis clone WS02712_A05... 46 8e-04 AM480261_2(AM480261|pid:none) Vitis vinifera contig VV78X072490.... 46 8e-04 (Q7VKE0) RecName: Full=30S ribosomal protein S17; &AE017143_166... 46 8e-04 (Q6B8W2) RecName: Full=30S ribosomal protein S17, chloroplastic;... 46 0.001 CP000806_4019(CP000806|pid:none) Cyanothece sp. ATCC 51142 circu... 46 0.001 CP001321_1460(CP001321|pid:none) Haemophilus parasuis SH0165, co... 46 0.001 (A4SSZ7) RecName: Full=30S ribosomal protein S17; &CP000644_380... 45 0.001 (A7N9T4) RecName: Full=30S ribosomal protein S17; &(Q0BNR8) Rec... 45 0.001 CP001103_452(CP001103|pid:none) Alteromonas macleodii 'Deep ecot... 45 0.001 (A0Q4J2) RecName: Full=30S ribosomal protein S17; &(A4IZS5) Rec... 45 0.001 (A5UDT8) RecName: Full=30S ribosomal protein S17; &(A5UHT9) Rec... 45 0.002 (P24321) RecName: Full=30S ribosomal protein S17; &(P62658) Rec... 45 0.002 CP001616_108(CP001616|pid:none) Tolumonas auensis DSM 9187, comp... 45 0.002 EU168190_137(EU168190|pid:none) Heterosigma akashiwo strain NIES... 45 0.002 CP000628_1488(CP000628|pid:none) Agrobacterium radiobacter K84 c... 45 0.002 (Q28UU5) RecName: Full=30S ribosomal protein S17; &CP000264_600... 45 0.002 (Q601K5) RecName: Full=30S ribosomal protein S17; &AE017332_195... 45 0.002 (A8F4S0) RecName: Full=30S ribosomal protein S17; &CP000812_581... 45 0.002 (Q2W2K0) RecName: Full=30S ribosomal protein S17; &AP007255_312... 45 0.002 (A9NAX9) RecName: Full=30S ribosomal protein S17; &CP000890_294... 45 0.002 CP000698_1063(CP000698|pid:none) Geobacter uraniireducens Rf4, c... 45 0.002 Z21677_11(Z21677|pid:none) Thermotoga maritima DNA for spc operon. 45 0.002 CP001087_3559(CP001087|pid:none) Desulfobacterium autotrophicum ... 45 0.002 (P38519) RecName: Full=30S ribosomal protein S17; &AE000512_146... 45 0.002 (Q4A8I0) RecName: Full=30S ribosomal protein S17; &(Q4AAE9) Rec... 45 0.002 CP001393_1664(CP001393|pid:none) Anaerocellum thermophilum DSM 6... 45 0.002 (A6LLM2) RecName: Full=30S ribosomal protein S17; &CP000716_941... 45 0.002 (A9KD22) RecName: Full=30S ribosomal protein S17; 44 0.003 (Q65QW4) RecName: Full=30S ribosomal protein S17; &AE016827_203... 44 0.003 (P51305) RecName: Full=30S ribosomal protein S17, chloroplastic;... 44 0.003 GQ231541_35(GQ231541|pid:none) Aureococcus anophagefferens strai... 44 0.003 (Q7MYG0) RecName: Full=30S ribosomal protein S17; &BX571874_258... 44 0.003 CP001019_1573(CP001019|pid:none) Coxiella burnetii CbuG_Q212, co... 44 0.004 (P55829) RecName: Full=30S ribosomal protein S17; &D64071_10(D6... 44 0.004 CP001390_3579(CP001390|pid:none) Geobacter sp. FRC-32, complete ... 44 0.004 (Q0VSJ4) RecName: Full=30S ribosomal protein S17; &AM286690_406... 44 0.004 (B6EPT4) RecName: Full=30S ribosomal protein S17; &FM178379_329... 44 0.004 CP001357_2088(CP001357|pid:none) Brachyspira hyodysenteriae WA1,... 44 0.004 (A5IHQ5) RecName: Full=30S ribosomal protein S17; &(Q5WZK3) Rec... 44 0.004 FM954972_2655(FM954972|pid:none) Vibrio splendidus LGP32 chromos... 44 0.004 CP000777_1861(CP000777|pid:none) Leptospira biflexa serovar Pato... 44 0.005 (A6VLJ7) RecName: Full=30S ribosomal protein S17; &CP000746_462... 44 0.005 (B0U0Y0) RecName: Full=30S ribosomal protein S17; &CP000937_573... 44 0.005 (A6X0C7) RecName: Full=30S ribosomal protein S17; &CP000758_194... 43 0.007 (Q8EUC2) RecName: Full=30S ribosomal protein S17; &BA000026_100... 43 0.007 (Q6FZD1) RecName: Full=30S ribosomal protein S17; &BX897700_789... 43 0.007 (B1LBN1) RecName: Full=30S ribosomal protein S17; &CP000969_136... 43 0.007 CP001101_2202(CP001101|pid:none) Chlorobium phaeobacteroides BS1... 43 0.007 (Q3AMN9) RecName: Full=30S ribosomal protein S17; &CP000110_361... 43 0.007 (Q5FTZ2) RecName: Full=30S ribosomal protein S17; &CP000009_355... 43 0.009 CP001389_1178(CP001389|pid:none) Rhizobium sp. NGR234, complete ... 43 0.009 (Q2K9K7) RecName: Full=30S ribosomal protein S17; &CP000133_165... 43 0.009 (Q30TV5) RecName: Full=30S ribosomal protein S17; &CP000153_295... 43 0.009 CU466930_1075(CU466930|pid:none) Candidatus Cloacamonas acidamin... 43 0.009 (Q92QG1) RecName: Full=30S ribosomal protein S17; &AL591688_137... 43 0.009 (Q1XDI3) RecName: Full=30S ribosomal protein S17, chloroplastic;... 43 0.009 (Q7TUP4) RecName: Full=30S ribosomal protein S17; &BX548175_226... 43 0.009 CP000487_43(CP000487|pid:none) Campylobacter fetus subsp. fetus ... 43 0.009 (Q0ANQ9) RecName: Full=30S ribosomal protein S17; &CP000449_178... 43 0.009 CP001074_1730(CP001074|pid:none) Rhizobium etli CIAT 652, comple... 43 0.009 (A7HZL5) RecName: Full=30S ribosomal protein S17; &CP000776_84(... 42 0.012 AY552545_85(AY552545|pid:none) Uncultured marine gamma proteobac... 42 0.012 (Q605C1) RecName: Full=30S ribosomal protein S17; &AE017282_223... 42 0.012 CT573071_733(CT573071|pid:none) Kuenenia stuttgartiensis genome ... 42 0.012 (B0C1E2) RecName: Full=30S ribosomal protein S17; &CP000828_459... 42 0.012 (A8LM66) RecName: Full=30S ribosomal protein S17; &CP000830_294... 42 0.012 (A9IW16) RecName: Full=30S ribosomal protein S17; &AM260525_135... 42 0.012 CP001287_239(CP001287|pid:none) Cyanothece sp. PCC 8801, complet... 42 0.012 (P54036) RecName: Full=30S ribosomal protein S17P; &A64358(A643... 42 0.012 (Q9CL40) RecName: Full=30S ribosomal protein S17; &AE004439_140... 42 0.015 CP001108_1999(CP001108|pid:none) Prosthecochloris aestuarii DSM ... 42 0.015 CP000607_248(CP000607|pid:none) Chlorobium phaeovibrioides DSM 2... 42 0.015 AM920437_203(AM920437|pid:none) Penicillium chrysogenum Wisconsi... 42 0.015 (A5GIT6) RecName: Full=30S ribosomal protein S17; &CT971583_425... 42 0.015 (A2SLE8) RecName: Full=30S ribosomal protein S17; &CP000555_342... 42 0.015 (Q2LQB1) RecName: Full=30S ribosomal protein S17; &CP000252_311... 42 0.015 (A8GVC3) RecName: Full=30S ribosomal protein S17; &(Q1RHN0) Rec... 42 0.015 (Q5JDH9) RecName: Full=30S ribosomal protein S17P; &AP006878_15... 42 0.015 CP000951_1040(CP000951|pid:none) Synechococcus sp. PCC 7002, com... 42 0.015 CP001472_1375(CP001472|pid:none) Acidobacterium capsulatum ATCC ... 42 0.015 CP000932_66(CP000932|pid:none) Campylobacter lari RM2100, comple... 42 0.015 CP001011_431(CP001011|pid:none) Xylella fastidiosa M23, complete... 42 0.015 (Q87E73) RecName: Full=30S ribosomal protein S17; &AE009442_417... 42 0.015 (Q8ABV5) RecName: Full=30S ribosomal protein S17 2; 42 0.020 (A5GVW9) RecName: Full=30S ribosomal protein S17; &CT978603_212... 42 0.020 (A5FRY4) RecName: Full=30S ribosomal protein S17; &(Q3ZZL5) Rec... 42 0.020 (A1W1V1) RecName: Full=30S ribosomal protein S17; &(A8FP12) Rec... 42 0.020 (Q6G2X4) RecName: Full=30S ribosomal protein S17; &BX897699_101... 42 0.020 CP001330_486(CP001330|pid:none) Micromonas sp. RCC299 chromosome... 41 0.026 AY548435_2(AY548435|pid:none) Fremyella diplosiphon clone 3088E1... 41 0.026 (A7H647) RecName: Full=30S ribosomal protein S17; &CP000768_170... 41 0.026 CP000510_3327(CP000510|pid:none) Psychromonas ingrahamii 37, com... 41 0.026 CP000594_316(CP000594|pid:none) Ostreococcus lucimarinus CCE9901... 41 0.026 (A0KRN3) RecName: Full=30S ribosomal protein S17; &(Q0HNS8) Rec... 41 0.026 CP000139_770(CP000139|pid:none) Bacteroides vulgatus ATCC 8482, ... 41 0.034 (A6U868) RecName: Full=30S ribosomal protein S17; &CP000738_988... 41 0.034 CP001344_1085(CP001344|pid:none) Cyanothece sp. PCC 7425, comple... 41 0.034 (A8G1D9) RecName: Full=30S ribosomal protein S17; &CP000821_429... 41 0.034 CP000860_226(CP000860|pid:none) Candidatus Desulforudis audaxvia... 41 0.034 (A0LIJ9) RecName: Full=30S ribosomal protein S17; &CP000478_154... 41 0.034 (B1KMX4) RecName: Full=30S ribosomal protein S17; &CP000961_463... 40 0.045 (Q9PE67) RecName: Full=30S ribosomal protein S17; &A82718(A8271... 40 0.045 (B8DNA5) RecName: Full=30S ribosomal protein S17; &CP001197_87(... 40 0.045 (A1REC3) RecName: Full=30S ribosomal protein S17; &(A3DA63) Rec... 40 0.045 (Q0AII7) RecName: Full=30S ribosomal protein S17; &CP000450_546... 40 0.045 (B0TM03) RecName: Full=30S ribosomal protein S17; &CP000931_408... 40 0.045 CP000878_1670(CP000878|pid:none) Prochlorococcus marinus str. MI... 40 0.045 CP001281_3157(CP001281|pid:none) Thauera sp. MZ1T, complete geno... 40 0.045 AM999887_1174(AM999887|pid:none) Wolbachia endosymbiont of Culex... 40 0.058 (B1YGV9) RecName: Full=30S ribosomal protein S17; &CP001022_104... 40 0.058 (Q67JV2) RecName: Full=30S ribosomal protein S17; &AP006840_306... 40 0.058 (Q83ER7) RecName: Full=30S ribosomal protein S17; 40 0.058 (A3Q991) RecName: Full=30S ribosomal protein S17; &CP000606_166... 40 0.058 (Q2FT32) RecName: Full=30S ribosomal protein S17P; &CP000254_21... 40 0.058 AM889285_3395(AM889285|pid:none) Gluconacetobacter diazotrophicu... 40 0.058 CP001398_1994(CP001398|pid:none) Thermococcus gammatolerans EJ3,... 40 0.076 CP001099_184(CP001099|pid:none) Chlorobaculum parvum NCIB 8327, ... 40 0.076 (Q2YAY8) RecName: Full=30S ribosomal protein S17; &CP000103_774... 40 0.076 CP001339_2290(CP001339|pid:none) Thioalkalivibrio sp. HL-EbGR7, ... 40 0.076 (Q1QDH7) RecName: Full=30S ribosomal protein S17; &CP000323_492... 40 0.076 AP008981_1053(AP008981|pid:none) Orientia tsutsugamushi str. Ike... 40 0.076 CP000492_2325(CP000492|pid:none) Chlorobium phaeobacteroides DSM... 40 0.076 (Q9CQE3) RecName: Full=28S ribosomal protein S17, mitochondrial;... 40 0.076 (Q4FUE7) RecName: Full=30S ribosomal protein S17; &CP000082_498... 40 0.076 CP000586_172(CP000586|pid:none) Ostreococcus lucimarinus CCE9901... 40 0.076 AE016828_209(AE016828|pid:none) Coxiella burnetii RSA 493, compl... 39 0.099 (Q3YRL8) RecName: Full=30S ribosomal protein S17; &CP000107_586... 39 0.099 (A8Z676) RecName: Full=30S ribosomal protein S17; &CP000770_193... 39 0.099 (Q39XZ7) RecName: Full=30S ribosomal protein S17; &CP000148_627... 39 0.099 AY911326_1(AY911326|pid:none) Bos taurus clone IMAGE:7961465 mit... 39 0.099 (P16180) RecName: Full=30S ribosomal protein S17, chloroplastic;... 39 0.099 J05215_1(J05215|pid:none) A.thaliana chloroplast ribosomal prote... 39 0.099 (A5D5G4) RecName: Full=30S ribosomal protein S17; &AP009389_329... 39 0.099 (Q0ABG6) RecName: Full=30S ribosomal protein S17; &CP000453_462... 39 0.099 (A4XZ81) RecName: Full=30S ribosomal protein S17; &CP000680_387... 39 0.13 (P82916) RecName: Full=28S ribosomal protein S17, mitochondrial;... 39 0.13 (Q8TW21) RecName: Full=30S ribosomal protein S17P; &AE009439_12... 39 0.13 CP001102_170(CP001102|pid:none) Candidatus Amoebophilus asiaticu... 39 0.13 CP001013_3968(CP001013|pid:none) Leptothrix cholodnii SP-6, comp... 39 0.13 FM992691_64(FM992691|pid:none) Candida dubliniensis CD36 chromos... 39 0.13 CP001146_823(CP001146|pid:none) Dictyoglomus thermophilum H-6-12... 39 0.17 (Q7UN11) RecName: Full=30S ribosomal protein S17; 39 0.17 (P73311) RecName: Full=30S ribosomal protein S17; &BA000022_762... 39 0.17 (Q748Z7) RecName: Full=30S ribosomal protein S17; &AE017180_283... 39 0.17 (Q5F5T6) RecName: Full=30S ribosomal protein S17; &AE004969_167... 39 0.17 DQ214813_1(DQ214813|pid:none) Taeniopygia guttata clone 0058P003... 39 0.17 CU207366_2793(CU207366|pid:none) Gramella forsetii KT0803 comple... 38 0.22 AM494971_383(AM494971|pid:none) Leishmania braziliensis chromoso... 38 0.22 CP000140_2301(CP000140|pid:none) Parabacteroides distasonis ATCC... 38 0.22 CP000612_221(CP000612|pid:none) Desulfotomaculum reducens MI-1, ... 38 0.22 AM270183_11(AM270183|pid:none) Aspergillus niger contig An08c028... 38 0.22 (A1W2R6) RecName: Full=30S ribosomal protein S17; &CP000539_285... 38 0.22 CP000488_162(CP000488|pid:none) Candidatus Ruthia magnifica str.... 38 0.22 (Q1ISB3) RecName: Full=30S ribosomal protein S17; &CP000360_123... 38 0.22 (Q824P2) RecName: Full=30S ribosomal protein S17; &AE015925_101... 38 0.22 CU459003_3796(CU459003|pid:none) Magnetospirillum gryphiswaldens... 38 0.29 (A1S227) RecName: Full=30S ribosomal protein S17; &CP000507_221... 38 0.29 (Q1R0G6) RecName: Full=30S ribosomal protein S17; &CP000285_427... 38 0.29 (A1KRI2) RecName: Full=30S ribosomal protein S17; &(A9M3V7) Rec... 38 0.29 (Q73H95) RecName: Full=30S ribosomal protein S17; &AE017196_601... 38 0.29 (Q18CG8) RecName: Full=30S ribosomal protein S17; &AM180355_83(... 38 0.29 (Q4JT56) RecName: Full=30S ribosomal protein S17; &CR931997_182... 38 0.29 BC095143_1(BC095143|pid:none) Danio rerio zgc:110031, mRNA (cDNA... 38 0.29 (Q98PZ1) RecName: Full=30S ribosomal protein S17; &AL445565_51(... 38 0.29 CP000975_687(CP000975|pid:none) Methylacidiphilum infernorum V4,... 38 0.29 (B7IHV5) RecName: Full=30S ribosomal protein S17; &CP001185_119... 38 0.29 (Q5P323) RecName: Full=30S ribosomal protein S17; &CR555306_216... 37 0.38 (Q9Y2R5) RecName: Full=28S ribosomal protein S17, mitochondrial;... 37 0.38 (A7NR54) RecName: Full=30S ribosomal protein S17; &CP000804_391... 37 0.38 BT049440_1(BT049440|pid:none) Salmo salar clone ssal-evd-522-223... 37 0.38 CP000743_1376(CP000743|pid:none) Methanococcus aeolicus Nankai-3... 37 0.38 BC037405_1(BC037405|pid:none) Homo sapiens mitochondrial ribosom... 37 0.38 (A1TYK6) RecName: Full=30S ribosomal protein S17; &CP000514_717... 37 0.38 (A6UZJ7) RecName: Full=30S ribosomal protein S17; &(B7V653) Rec... 37 0.49 (B1IGE5) RecName: Full=30S ribosomal protein S17; &CP000939_348... 37 0.49 AY657043_1(AY657043|pid:none) Synthetic construct Peudomonas aer... 37 0.49 (A4VHN9) RecName: Full=30S ribosomal protein S17; &CP000304_782... 37 0.49 (A5CCK3) RecName: Full=30S ribosomal protein S17; &AM494475_367... 37 0.49 AP010656_85(AP010656|pid:none) Candidatus Azobacteroides pseudot... 37 0.49 CP001358_657(CP001358|pid:none) Desulfovibrio desulfuricans subs... 37 0.49 (Q488A2) RecName: Full=30S ribosomal protein S17; &CP000083_831... 37 0.49 (Q04PU7) RecName: Full=30S ribosomal protein S17; &CP000348_381... 37 0.49 CP000081_381(CP000081|pid:none) Leishmania major chromosome 35, ... 37 0.64 CR382138_249(CR382138|pid:none) Debaryomyces hansenii strain CBS... 37 0.64 (Q134T8) RecName: Full=30S ribosomal protein S17; &(Q2IXQ1) Rec... 37 0.64 (Q2RFQ6) RecName: Full=30S ribosomal protein S17; &CP000232_239... 37 0.64 (Q0BUP1) RecName: Full=30S ribosomal protein S17; &CP000394_563... 37 0.64 CP000236_401(CP000236|pid:none) Ehrlichia chaffeensis str. Arkan... 37 0.64 (A9BPS7) RecName: Full=30S ribosomal protein S17; &CP000884_399... 37 0.64 (Q089P5) RecName: Full=30S ribosomal protein S17; &CP000447_157... 37 0.64 (Q8TRT8) RecName: Full=30S ribosomal protein S17P; &AE010299_10... 37 0.64 (Q7NQG1) RecName: Full=30S ribosomal protein S17; &AE016825_417... 37 0.64 (Q6LXE4) RecName: Full=30S ribosomal protein S17P; &BX950229_14... 37 0.64 (Q046B6) RecName: Full=30S ribosomal protein S17; &(Q74L80) Rec... 37 0.64 (Q2GH47) RecName: Full=30S ribosomal protein S17; 37 0.64 AM398681_1294(AM398681|pid:none) Flavobacterium psychrophilum JI... 37 0.64 (Q6F7S1) RecName: Full=30S ribosomal protein S17; &CR543861_289... 36 0.84 (Q7MTM2) RecName: Full=30S ribosomal protein S17; &AE015924_165... 36 0.84 GQ231542_18(GQ231542|pid:none) Aureoumbra lagunensis strain CCMP... 36 0.84 (A5I7J7) RecName: Full=30S ribosomal protein S17; &(A7FZ60) Rec... 36 0.84 CP000885_3614(CP000885|pid:none) Clostridium phytofermentans ISD... 36 0.84 CP001157_617(CP001157|pid:none) Azotobacter vinelandii DJ, compl... 36 0.84 (A8GT60) RecName: Full=30S ribosomal protein S17; &CP000848_989... 36 0.84 (B1AIM9) RecName: Full=30S ribosomal protein S17; &(B5ZB49) Rec... 36 0.84 (P12741) RecName: Full=30S ribosomal protein S17P; AltName: Full... 36 0.84 (Q5NQ56) RecName: Full=30S ribosomal protein S17; &AE008692_525... 36 0.84 (B0KK76) RecName: Full=30S ribosomal protein S17; &(B1JDX5) Rec... 36 0.84 (B0BUQ1) RecName: Full=30S ribosomal protein S17; &CP000766_102... 36 0.84 (A5EX90) RecName: Full=30S ribosomal protein S17; &CP000513_120... 36 0.84 CP001145_954(CP001145|pid:none) Coprothermobacter proteolyticus ... 36 0.84 (Q12ZU2) RecName: Full=30S ribosomal protein S17P; &CP000300_10... 36 1.1 (Q48D45) RecName: Full=30S ribosomal protein S17; &(Q4ZMQ3) Rec... 36 1.1 (A4XBN7) RecName: Full=30S ribosomal protein S17; &CP000667_385... 36 1.1 (A1KB18) RecName: Full=30S ribosomal protein S17; 36 1.1 CP000473_5048(CP000473|pid:none) Solibacter usitatus Ellin6076, ... 36 1.1 (B2FQJ3) RecName: Full=30S ribosomal protein S17; &AM743169_866... 36 1.1 EU686639_11(EU686639|pid:none) Uncultured marine group II euryar... 36 1.1 FM864216_133(FM864216|pid:none) Mycoplasma conjunctivae HRC/581T... 36 1.1 CP000509_3844(CP000509|pid:none) Nocardioides sp. JS614, complet... 36 1.1 (A9NEE2) RecName: Full=30S ribosomal protein S17; &CP000896_78(... 36 1.1 AE006914_997(AE006914|pid:none) Rickettsia conorii str. Malish 7... 36 1.1 CP001322_1893(CP001322|pid:none) Desulfatibacillum alkenivorans ... 36 1.1 (Q92GX5) RecName: Full=30S ribosomal protein S17; &CP001227_756... 36 1.1 (A6LPS0) RecName: Full=30S ribosomal protein S17; &CP000721_160... 36 1.1 BT082752_1(BT082752|pid:none) Anoplopoma fimbria clone afim-evh-... 36 1.1 AL606656_5(AL606656|pid:none) Oryza sativa genomic DNA, chromoso... 36 1.1 CP001612_770(CP001612|pid:none) Rickettsia africae ESF-5, comple... 35 1.4 (A6TWH3) RecName: Full=30S ribosomal protein S17; &CP000724_429... 35 1.4 (Q6ME54) RecName: Full=30S ribosomal protein S17; &BX908798_421... 35 1.4 CP001337_2922(CP001337|pid:none) Chloroflexus aggregans DSM 9485... 35 1.4 CU207211_2994(CU207211|pid:none) Herminiimonas arsenicoxydans ch... 35 1.4 BC121535_1(BC121535|pid:none) Xenopus tropicalis mitochondrial r... 35 1.4 AP008957_1861(AP008957|pid:none) Rhodococcus erythropolis PR4 DN... 35 1.4 (Q8RIG4) RecName: Full=30S ribosomal protein S17; &AE009951_131... 35 1.4 (A8EZK7) RecName: Full=30S ribosomal protein S17; &CP000409_837... 35 1.4 CP001251_929(CP001251|pid:none) Dictyoglomus turgidum DSM 6724, ... 35 1.4 (Q5FFU9) RecName: Full=30S ribosomal protein S17; &(Q5HAT1) Rec... 35 1.4 CP001154_261(CP001154|pid:none) Laribacter hongkongensis HLHK9, ... 35 1.4 CR767821_622(CR767821|pid:none) Ehrlichia ruminantium strain Wel... 35 1.4 (Q68W87) RecName: Full=30S ribosomal protein S17; &AE017197_615... 35 1.4 (A8YXL4) RecName: Full=30S ribosomal protein S17; &CP000517_254... 35 1.4 (Q3SSV7) RecName: Full=30S ribosomal protein S17; &CP000115_136... 35 1.9 (Q9V1U5) RecName: Full=30S ribosomal protein S17P; &AJ248284_34... 35 1.9 (A6W383) RecName: Full=30S ribosomal protein S17; &CP000749_421... 35 1.9 (Q02W33) RecName: Full=30S ribosomal protein S17; &CP000425_220... 35 1.9 (A5VXQ6) RecName: Full=30S ribosomal protein S17; &(Q88QM6) Rec... 35 1.9 AM746676_7968(AM746676|pid:none) Sorangium cellulosum 'So ce 56'... 35 1.9 (Q21RW7) RecName: Full=30S ribosomal protein S17; &CP000267_372... 35 1.9 (A1WHD4) RecName: Full=30S ribosomal protein S17; &CP000542_124... 35 1.9 CU469464_350(CU469464|pid:none) Candidatus Phytoplasma mali stra... 35 1.9 (Q1AU38) RecName: Full=30S ribosomal protein S17; &CP000386_210... 35 1.9 (Q4G357) RecName: Full=30S ribosomal protein S17, chloroplastic;... 35 1.9 AP009152_625(AP009152|pid:none) Kocuria rhizophila DC2201 DNA, c... 35 1.9 (A2RNP6) RecName: Full=30S ribosomal protein S17; &(Q9CDX1) Rec... 35 2.4 (Q5FM81) RecName: Full=30S ribosomal protein S17; &CP000033_285... 35 2.4 CP000568_2868(CP000568|pid:none) Clostridium thermocellum ATCC 2... 35 2.4 (A1WVB3) RecName: Full=30S ribosomal protein S17; &CP000544_830... 35 2.4 (Q13TH9) RecName: Full=30S ribosomal protein S17; &CP000270_407... 35 2.4 CP000678_752(CP000678|pid:none) Methanobrevibacter smithii ATCC ... 35 2.4 AE013599_4062(AE013599|pid:none) Drosophila melanogaster chromos... 35 2.4 AP009153_882(AP009153|pid:none) Gemmatimonas aurantiaca T-27 DNA... 35 2.4 (Q7VTC4) RecName: Full=30S ribosomal protein S17; &(Q7W2E7) Rec... 35 2.4 (O31164) RecName: Full=30S ribosomal protein S17; &AF031160_6(A... 35 2.4 AE008384_2133(AE008384|pid:none) Methanosarcina mazei strain Goe... 35 2.4 (A9IIY6) RecName: Full=30S ribosomal protein S17; &AM902716_496... 34 3.2 (B5XJ45) RecName: Full=30S ribosomal protein S17; &(Q1J905) Rec... 34 3.2 CP001104_298(CP001104|pid:none) Eubacterium eligens ATCC 27750, ... 34 3.2 (Q1GPA8) RecName: Full=30S ribosomal protein S17; &CP000356_278... 34 3.2 (Q3K5Z7) RecName: Full=30S ribosomal protein S17; &(Q4K542) Rec... 34 3.2 (Q0S3G7) RecName: Full=30S ribosomal protein S17; &AP011115_619... 34 3.2 EU686610_20(EU686610|pid:none) Uncultured marine group II euryar... 34 3.2 (Q07KM7) RecName: Full=30S ribosomal protein S17; &(Q211F7) Rec... 34 3.2 CP001399_1377(CP001399|pid:none) Sulfolobus islandicus L.S.2.15,... 34 3.2 (B0RU73) RecName: Full=30S ribosomal protein S17; &AM920689_348... 34 3.2 (Q82X80) RecName: Full=30S ribosomal protein S17; &AL954747_410... 34 3.2 CP001628_1619(CP001628|pid:none) Micrococcus luteus NCTC 2665, c... 34 4.2 (A7X5F0) RecName: Full=30S ribosomal protein S17; &(Q7A462) Rec... 34 4.2 CP001056_217(CP001056|pid:none) Clostridium botulinum B str. Ekl... 34 4.2 CP001601_398(CP001601|pid:none) Corynebacterium aurimucosum ATCC... 34 4.2 CP001047_322(CP001047|pid:none) Mycoplasma arthritidis 158L3-1, ... 34 4.2 (A1V894) RecName: Full=30S ribosomal protein S17; &(A2S7I5) Rec... 34 4.2 (Q2SU36) RecName: Full=30S ribosomal protein S17; &CP000086_300... 34 4.2 (Q8DS22) RecName: Full=30S ribosomal protein S17; &AE014133_182... 34 4.2 AP007281_1385(AP007281|pid:none) Lactobacillus reuteri JCM 1112 ... 34 4.2 CP000477_1682(CP000477|pid:none) Methanosaeta thermophila PT, co... 34 4.2 (Q4URE8) RecName: Full=30S ribosomal protein S17; &(Q8PC41) Rec... 34 4.2 (B6JEU2) RecName: Full=30S ribosomal protein S17; &CP001196_166... 33 5.4 BX294146_296(BX294146|pid:none) Rhodopirellula baltica SH 1 comp... 33 5.4 (A4QBJ1) RecName: Full=30S ribosomal protein S17; &(Q8NSZ7) Rec... 33 5.4 (Q49ZF9) RecName: Full=30S ribosomal protein S17; &AP008934_672... 33 5.4 (A9ADK2) RecName: Full=30S ribosomal protein S17; &AP009385_293... 33 5.4 AE017343_457(AE017343|pid:none) Cryptococcus neoformans var. neo... 33 5.4 (Q8FS73) RecName: Full=30S ribosomal protein S17; &BA000035_531... 33 5.4 (A0K3N4) RecName: Full=30S ribosomal protein S17; &(B1JU31) Rec... 33 5.4 (A4YSK1) RecName: Full=30S ribosomal protein S17; &(A5ELL8) Rec... 33 7.1 AE016819_80(AE016819|pid:none) Ashbya gossypii (= Eremothecium g... 33 7.1 (Q2G8X1) RecName: Full=30S ribosomal protein S17; &CP000248_125... 33 7.1 CP001280_558(CP001280|pid:none) Methylocella silvestris BL2, com... 33 7.1 (Q4L8A5) RecName: Full=30S ribosomal protein S17; &AP006716_811... 33 7.1 (Q661D3) RecName: Full=30S ribosomal protein S17; &CP000013_479... 33 7.1 (Q9TJN6) RecName: Full=30S ribosomal protein S17, chloroplastic;... 33 7.1 (Q5HM08) RecName: Full=30S ribosomal protein S17; &(Q8CRG8) Rec... 33 7.1 (A5IV25) RecName: Full=30S ribosomal protein S17; &(A6QJ83) Rec... 33 7.1 (O28363) RecName: Full=30S ribosomal protein S17P; &AE000782_18... 33 7.1 (A2RC23) RecName: Full=30S ribosomal protein S17; &(Q5XEC6) Rec... 33 9.3 CP001071_289(CP001071|pid:none) Akkermansia muciniphila ATCC BAA... 33 9.3 CP000382_903(CP000382|pid:none) Clostridium novyi NT, complete g... 33 9.3 AP009484_204(AP009484|pid:none) Macrococcus caseolyticus JCSC540... 33 9.3 (Q83FZ5) RecName: Full=30S ribosomal protein S17; &(Q83I69) Rec... 33 9.3 AM295250_1717(AM295250|pid:none) Staphylococcus carnosus subsp. ... 33 9.3 (A3CK72) RecName: Full=30S ribosomal protein S17; &(A4VSG3) Rec... 33 9.3 CP000481_313(CP000481|pid:none) Acidothermus cellulolyticus 11B ... 33 9.3 (Q2S3Q5) RecName: Full=30S ribosomal protein S17; &CP000159_101... 33 9.3 (A4IJJ8) RecName: Full=30S ribosomal protein S17; &CP000557_115... 33 9.3 (Q9A8U4) RecName: Full=30S ribosomal protein S17; &AE005673_125... 33 9.3 (A4SUX0) RecName: Full=30S ribosomal protein S17; &CP000655_62(... 33 9.3 (B0T2D1) RecName: Full=30S ribosomal protein S17; &CP000927_161... 33 9.3 (Q38US1) RecName: Full=30S ribosomal protein S17; &CR936503_175... 33 9.3
>(Q86K64) RecName: Full=Probable 28S ribosomal protein S17, mitochondrial; Short=S17mt; AltName: Full=MRP-S17; Flags: Precursor; &AC116977_43(AC116977|pid:none) Length = 127
Score = 256 bits (653), Expect = 5e-67 Identities = 122/122 (100%), Positives = 122/122 (100%) Frame = +3
Query: 129 FEIVHKHQKFISGVCISKTHTKTAMCQVKRLYFDKGKYSALNYKTTKYMIHDPNDICAVG 308 FEIVHKHQKFISGVCISKTHTKTAMCQVKRLYFDKGKYSALNYKTTKYMIHDPNDICAVG Sbjct: 6 FEIVHKHQKFISGVCISKTHTKTAMCQVKRLYFDKGKYSALNYKTTKYMIHDPNDICAVG 65
Query: 309 DQVHFRECAPVSKRKAHVVEKIVKKNPITEFLRQNPQYIVTPKEIAERKENDKIKYKHIT 488 DQVHFRECAPVSKRKAHVVEKIVKKNPITEFLRQNPQYIVTPKEIAERKENDKIKYKHIT Sbjct: 66 DQVHFRECAPVSKRKAHVVEKIVKKNPITEFLRQNPQYIVTPKEIAERKENDKIKYKHIT 125
Query: 489 DL 494 DL Sbjct: 126 DL 127
Lambda K H 0.318 0.134 0.401
Gapped Lambda K H 0.267 0.0410 0.140
Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 3236559 Number of Hits to DB: 604,796,525 Number of extensions: 9862660 Number of successful extensions: 24626 Number of sequences better than 10.0: 373 Number of HSP's gapped: 24603 Number of HSP's successfully gapped: 373 Length of query: 215 Length of database: 1,051,180,864 Length adjustment: 123 Effective length of query: 92 Effective length of database: 653,084,107 Effective search space: 60083737844 Effective search space used: 60083737844 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 31 (16.5 bits)
|
PSORT |
|
VS (DIR, S) |
1 |
VH (FL, L) |
0 |
VF (FL, S) |
0 |
AH (FL, L) |
0 |
AF (FL, S) |
0 |
SL (DIR, L) |
0 |
SS (DIR, S) |
0 |
SH (FL, L) |
0 |
SF (FL, S) |
0 |
CH (FL, L) |
0 |
CF (FL, S) |
0 |
FCL (DIR, L) |
0 |
FC (DIR, S) |
2 |
FC-IC (SUB) |
0 |