Contig-U15113-1
Contig ID Contig-U15113-1
Contig update 2004. 6.11
Contig sequence
>Contig-U15113-1 (Contig-U15113-1Q) /CSM_Contig/Contig-U15113-1Q.Seq.d
TTTTTTTTTTTTTTTTTTGAAATTCCAATAAACGAATCTTTATTATATAC
AAATTGTAAAGATACGAAAAAAGGTTGAAAACATACTGATAATTTGAGAG
ATTAACGGTATGATTTTTGGAATCTGGCTCTGGCACCACGACCACCAAAT
TTCTTTGGTTCACATCTACGTGGATCAGCAACTAAGAGAGATCTGTCGTA
ATCTAAGATTTTCTTTTTGATTTCATTTTTGGATTCTTCATCAACGTATT
TTTGGTGATAAGCAACGATTGATTTAGCGATAGCTTGTCTGATGGCGTAG
ATTTGAGCGACTGAACCACCACCTCTGACTCTAACACGGATATCAACTTG
TGAGAAAACATCTTTACCAACAATTAAGACTGGTTCGTAAACTTTTAATT
TTAAGGNCTTTGGTTGGATGAATTCTAATGGGACACCATTAACTTTGATT
AAACCTTTACCGTCGCTGTTGCTTATGCTACCAACGGTAAAGGTTTAATC
AAAGTTAATGGTGTCCCATTAGAATTCATCCAACCAAAGAACTTAAAATT
AAAAGTTTACGAACCAGTCTTAATTGTTGGTAAAGATGTTTTCTCACAAG
TTGATATCCGTGTTAGAGTCAGAGGTGGTGGTTCAGTCGCTCAAATCTAC
GCCATCAGACAAGCTATCGCTAAATCAATCGTTGCTTATCACCAAAAATA
CGTTGATGAAGAATCCAAAAATGAAATCAAAAAGAAAATCTTAGATTACG
ACAGATCTCTCTTAGTTGCTGATCCACGTAGATGTGAACCAAAGAAATTT
GGTGGTCGTGGTGCCAGAGCCAGATTCCAAAAATCATACCGTTAATCTCT
CAAATTATCAGTATGTTTTCAACCTTTTTTCGTATCTTTACAATTTGTAT
ATAATAAAGATTCGTTTATTGGAATTTCAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA

Gap no gap
Contig length 981
Chromosome number (1..6, M) -
Chromosome length -
Start point -
End point -
Strand (PLUS/MINUS) -
Number of clones 35
Number of EST 55
Link to clone list U15113
List of clone(s)

est1=FC-AG06E,1,542
est2=VSJ824Z,366,917
est3=VSI858Z,379,926
est4=VHL163F,381,934
est5=VHL163Z,381,916
est6=VHB835F,385,938
est7=VHB835Z,385,913
est8=VHO831F,385,938
est9=VHO831Z,385,875
est10=VFO627F,387,945
est11=VHK504F,388,928
est12=VHK504Z,388,913
est13=VSG676F,389,945
est14=VHC745F,391,878
est15=VHC745Z,391,703
est16=VHE402F,391,939
est17=VHE402Z,391,864
est18=VSD530F,391,945
est19=VSD530Z,391,926
est20=VSJ824F,391,945
est21=VSI858F,392,820
est22=VSK215F,392,945
est23=VSK215Z,392,909
est24=VSA664E,396,981
est25=VSJ216F,396,945
est26=VSJ216Z,396,926
est27=SSJ607E,397,930
est28=VSG853F,400,782
est29=VSI196F,401,945
est30=VSF161F,403,945
est31=VSF161Z,403,910
est32=VSI711E,405,926
est33=VSC125Z,406,981
est34=VSD150F,407,945
est35=VSD150Z,407,925
est36=VSI196Z,407,909
est37=VSJ619F,413,945
est38=VSJ619Z,413,926
est39=VSF466F,424,918
est40=VSF466Z,424,910
est41=VSD494F,425,945
est42=VSD494Z,425,926
est43=VSF511F,428,943
est44=VSF511Z,428,909
est45=VSD735F,429,945
est46=VSD735Z,429,926
est47=VSJ641Z,436,926
est48=SLC210E,447,930
est49=VSJ641F,617,936
est50=VSC134Z,675,964
est51=VSA453Z,692,970
est52=VSA719Z,740,962
est53=VSB741Z,741,936
est54=VSE887Z,741,936
est55=VSC224Z,766,948
Translated Amino Acid sequence
fffff*nsnkrifiiykl*ryekrlkty**ferltv*flesgsgttttkflwftstwisn
*ersvvi*dflfdfifgffinvflvisnd*fsdslsdgvdlsd*tttsdsntdinl*eni
ftnn*dwfvnf*f*glwldef*wdtinfd*TFTVAVAYATNGKGLIKVNGVPLEFIQPKN
LKLKVYEPVLIVGKDVFSQVDIRVRVRGGGSVAQIYAIRQAIAKSIVAYHQKYVDEESKN
EIKKKILDYDRSLLVADPRRCEPKKFGGRGARARFQKSYR*slklsvcfqpffvslqfvy
nkdsfigiskkkkkkkkkkkkkkkkk


Translated Amino Acid sequence (All Frames)
Frame A:
ffffffeipinesllytnckdtkkg*khtdnlrd*rydfwnlalaprppnffgshlrgsa
tkrdls*skifflisfldssstyfw**atidlaiaclma*i*atepppltltristcekt
slptiktgs*tfnfkxfgwmnsngtpltlikplpslllmlptvkv*sklmvsh*nssnqr
t*n*kftnqs*llvkmfshklisvlesevvvqslkstpsdklslnqsllitkntlmknpk
mkskrks*ittdls*llihvdvnqrnlvvvvpepdsknhtvnlsnyqyvfnlfsylynly
iikirllefqkkkkkkkkkkkkkkkkk


Frame B:
ffffflkfq*tnlyyiqivkirkkvenilii*eingmifgiwlwhhdhqislvhiyvdqq
lreicrnlrfsf*fhfwilhqrifgdkqrli*r*lv*wrrferlnhhl*l*hgyqlvrkh
lyqqlrlvrkllilrxlvg*ilmghh*l*lnlyrrcclcyqr*rfnqs*wcpirihptke
lkikslrtslncw*rcflts*ypc*sqrwwfsrsnlrhqtsyr*inrclspkir**riqk
*nqkenlrlrqislsc*st*m*tkeiwwswcqsqipkiiplisqiismfstffriftici
**rfvywnfkkkkkkkkkkkkkkkkk


Frame C:
fffff*nsnkrifiiykl*ryekrlkty**ferltv*flesgsgttttkflwftstwisn
*ersvvi*dflfdfifgffinvflvisnd*fsdslsdgvdlsd*tttsdsntdinl*eni
ftnn*dwfvnf*f*glwldef*wdtinfd*TFTVAVAYATNGKGLIKVNGVPLEFIQPKN
LKLKVYEPVLIVGKDVFSQVDIRVRVRGGGSVAQIYAIRQAIAKSIVAYHQKYVDEESKN
EIKKKILDYDRSLLVADPRRCEPKKFGGRGARARFQKSYR*slklsvcfqpffvslqfvy
nkdsfigiskkkkkkkkkkkkkkkkk


own update 2004. 6.23
Homology vs CSM-cDNA
Query= Contig-U15113-1 (Contig-U15113-1Q)
/CSM_Contig/Contig-U15113-1Q.Seq.d
(981 letters)

Database: CSM
8402 sequences; 8,075,542 total letters


Score E
Sequences producing significant alignments: (bits) Value

Contig-U15113-1 (Contig-U15113-1Q) /CSM_Contig/Conti... 1798 0.0
Contig-U07767-1 (Contig-U07767-1Q) /CSM_Contig/Conti... 38 0.025
Contig-U02783-1 (Contig-U02783-1Q) /CSM_Contig/Conti... 36 0.099
Contig-U11401-1 (Contig-U11401-1Q) /CSM_Contig/Conti... 34 0.39
Contig-U01591-1 (Contig-U01591-1Q) /CSM_Contig/Conti... 34 0.39
Contig-U16339-1 (Contig-U16339-1Q) /CSM_Contig/Conti... 32 1.5
Contig-U16165-1 (Contig-U16165-1Q) /CSM_Contig/Conti... 32 1.5
Contig-U15355-1 (Contig-U15355-1Q) /CSM_Contig/Conti... 32 1.5
Contig-U15328-1 (Contig-U15328-1Q) /CSM_Contig/Conti... 32 1.5
Contig-U12563-1 (Contig-U12563-1Q) /CSM_Contig/Conti... 32 1.5

>Contig-U15113-1 (Contig-U15113-1Q) /CSM_Contig/Contig-U15113-1Q.Seq.d
Length = 981

Score = 1798 bits (907), Expect = 0.0
Identities = 910/910 (100%)
Strand = Plus / Plus


Query: 19 gaaattccaataaacgaatctttattatatacaaattgtaaagatacgaaaaaaggttga 78
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19 gaaattccaataaacgaatctttattatatacaaattgtaaagatacgaaaaaaggttga 78


Query: 79 aaacatactgataatttgagagattaacggtatgatttttggaatctggctctggcacca 138
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 79 aaacatactgataatttgagagattaacggtatgatttttggaatctggctctggcacca 138


Query: 139 cgaccaccaaatttctttggttcacatctacgtggatcagcaactaagagagatctgtcg 198
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 139 cgaccaccaaatttctttggttcacatctacgtggatcagcaactaagagagatctgtcg 198


Query: 199 taatctaagattttctttttgatttcatttttggattcttcatcaacgtatttttggtga 258
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 199 taatctaagattttctttttgatttcatttttggattcttcatcaacgtatttttggtga 258


Query: 259 taagcaacgattgatttagcgatagcttgtctgatggcgtagatttgagcgactgaacca 318
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 259 taagcaacgattgatttagcgatagcttgtctgatggcgtagatttgagcgactgaacca 318


Query: 319 ccacctctgactctaacacggatatcaacttgtgagaaaacatctttaccaacaattaag 378
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 ccacctctgactctaacacggatatcaacttgtgagaaaacatctttaccaacaattaag 378


Query: 379 actggttcgtaaacttttaattttaaggnctttggttggatgaattctaatgggacacca 438
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 actggttcgtaaacttttaattttaaggnctttggttggatgaattctaatgggacacca 438


Query: 439 ttaactttgattaaacctttaccgtcgctgttgcttatgctaccaacggtaaaggtttaa 498
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 ttaactttgattaaacctttaccgtcgctgttgcttatgctaccaacggtaaaggtttaa 498


Query: 499 tcaaagttaatggtgtcccattagaattcatccaaccaaagaacttaaaattaaaagttt 558
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 499 tcaaagttaatggtgtcccattagaattcatccaaccaaagaacttaaaattaaaagttt 558


Query: 559 acgaaccagtcttaattgttggtaaagatgttttctcacaagttgatatccgtgttagag 618
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 559 acgaaccagtcttaattgttggtaaagatgttttctcacaagttgatatccgtgttagag 618


Query: 619 tcagaggtggtggttcagtcgctcaaatctacgccatcagacaagctatcgctaaatcaa 678
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 619 tcagaggtggtggttcagtcgctcaaatctacgccatcagacaagctatcgctaaatcaa 678


Query: 679 tcgttgcttatcaccaaaaatacgttgatgaagaatccaaaaatgaaatcaaaaagaaaa 738
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 679 tcgttgcttatcaccaaaaatacgttgatgaagaatccaaaaatgaaatcaaaaagaaaa 738


Query: 739 tcttagattacgacagatctctcttagttgctgatccacgtagatgtgaaccaaagaaat 798
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 739 tcttagattacgacagatctctcttagttgctgatccacgtagatgtgaaccaaagaaat 798


Query: 799 ttggtggtcgtggtgccagagccagattccaaaaatcataccgttaatctctcaaattat 858
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 799 ttggtggtcgtggtgccagagccagattccaaaaatcataccgttaatctctcaaattat 858


Query: 859 cagtatgttttcaaccttttttcgtatctttacaatttgtatataataaagattcgttta 918
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 859 cagtatgttttcaaccttttttcgtatctttacaatttgtatataataaagattcgttta 918


Query: 919 ttggaatttc 928
||||||||||
Sbjct: 919 ttggaatttc 928


Score = 1689 bits (852), Expect = 0.0
Identities = 898/912 (98%), Gaps = 4/912 (0%)
Strand = Plus / Minus


Query: 19 gaaattccaataaacgaatctttattatatacaaattgtaaagatacgaaaaaaggttga 78
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 928 gaaattccaataaacgaatctttattatatacaaattgtaaagatacgaaaaaaggttga 869


Query: 79 aaacatactgataatttgagagattaacggtatgatttttggaatctggctctggcacca 138
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 868 aaacatactgataatttgagagattaacggtatgatttttggaatctggctctggcacca 809


Query: 139 cgaccaccaaatttctttggttcacatctacgtggatcagcaactaagagagatctgtcg 198
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 808 cgaccaccaaatttctttggttcacatctacgtggatcagcaactaagagagatctgtcg 749


Query: 199 taatctaagattttctttttgatttcatttttggattcttcatcaacgtatttttggtga 258
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 748 taatctaagattttctttttgatttcatttttggattcttcatcaacgtatttttggtga 689


Query: 259 taagcaacgattgatttagcgatagcttgtctgatggcgtagatttgagcgactgaacca 318
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 688 taagcaacgattgatttagcgatagcttgtctgatggcgtagatttgagcgactgaacca 629


Query: 319 ccacctctgactctaacacggatatcaacttgtgagaaaacatctttaccaacaattaag 378
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 628 ccacctctgactctaacacggatatcaacttgtgagaaaacatctttaccaacaattaag 569


Query: 379 actggttcgtaaacttttaattttaaggnctttggttggatgaattctaatgggacacca 438
||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 568 actggttcgtaaacttttaattttaagttctttggttggatgaattctaatgggacacca 509


Query: 439 ttaactttgattaaacctttaccgtcgctgttgcttatgctac--caacggtaaaggttt 496
||||||||||||||||||||||||| | || || || || || | |||||||||||||
Sbjct: 508 ttaactttgattaaacctttaccgttg--gtagcataagcaacagcgacggtaaaggttt 451


Query: 497 aatcaaagttaatggtgtcccattagaattcatccaaccaaagaacttaaaattaaaagt 556
||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 450 aatcaaagttaatggtgtcccattagaattcatccaaccaaagnccttaaaattaaaagt 391


Query: 557 ttacgaaccagtcttaattgttggtaaagatgttttctcacaagttgatatccgtgttag 616
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 390 ttacgaaccagtcttaattgttggtaaagatgttttctcacaagttgatatccgtgttag 331


Query: 617 agtcagaggtggtggttcagtcgctcaaatctacgccatcagacaagctatcgctaaatc 676
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 330 agtcagaggtggtggttcagtcgctcaaatctacgccatcagacaagctatcgctaaatc 271


Query: 677 aatcgttgcttatcaccaaaaatacgttgatgaagaatccaaaaatgaaatcaaaaagaa 736
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 270 aatcgttgcttatcaccaaaaatacgttgatgaagaatccaaaaatgaaatcaaaaagaa 211


Query: 737 aatcttagattacgacagatctctcttagttgctgatccacgtagatgtgaaccaaagaa 796
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 210 aatcttagattacgacagatctctcttagttgctgatccacgtagatgtgaaccaaagaa 151


Query: 797 atttggtggtcgtggtgccagagccagattccaaaaatcataccgttaatctctcaaatt 856
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 150 atttggtggtcgtggtgccagagccagattccaaaaatcataccgttaatctctcaaatt 91


Query: 857 atcagtatgttttcaaccttttttcgtatctttacaatttgtatataataaagattcgtt 916
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 90 atcagtatgttttcaaccttttttcgtatctttacaatttgtatataataaagattcgtt 31


Query: 917 tattggaatttc 928
||||||||||||
Sbjct: 30 tattggaatttc 19


>Contig-U07767-1 (Contig-U07767-1Q) /CSM_Contig/Contig-U07767-1Q.Seq.d
Length = 1161

Score = 38.2 bits (19), Expect = 0.025
Identities = 19/19 (100%)
Strand = Plus / Minus


Query: 884 atctttacaatttgtatat 902
|||||||||||||||||||
Sbjct: 150 atctttacaatttgtatat 132


Score = 38.2 bits (19), Expect = 0.025
Identities = 19/19 (100%)
Strand = Plus / Plus


Query: 45 atatacaaattgtaaagat 63
|||||||||||||||||||
Sbjct: 132 atatacaaattgtaaagat 150


>Contig-U02783-1 (Contig-U02783-1Q) /CSM_Contig/Contig-U02783-1Q.Seq.d
Length = 1272

Score = 36.2 bits (18), Expect = 0.099
Identities = 21/22 (95%)
Strand = Plus / Minus


Query: 209 ttttctttttgatttcattttt 230
|||||||||||||| |||||||
Sbjct: 39 ttttctttttgattccattttt 18


Score = 36.2 bits (18), Expect = 0.099
Identities = 21/22 (95%)
Strand = Plus / Plus


Query: 717 aaaaatgaaatcaaaaagaaaa 738
||||||| ||||||||||||||
Sbjct: 18 aaaaatggaatcaaaaagaaaa 39


Database: CSM
Posted date: Jun 21, 2004 1:35 PM
Number of letters in database: 8,075,542
Number of sequences in database: 8402

Lambda K H
1.37 0.711 1.31

Gapped
Lambda K H
1.37 0.711 1.31


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 15,913
Number of Sequences: 8402
Number of extensions: 15913
Number of successful extensions: 1457
Number of sequences better than 10.0: 67
length of query: 981
length of database: 8,075,542
effective HSP length: 16
effective length of query: 965
effective length of database: 7,941,110
effective search space: 7663171150
effective search space used: 7663171150
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 15 (30.2 bits)
dna update 2009. 1.11
Homology vs DNA
Query= Contig-U15113-1 (Contig-U15113-1Q) /CSM_Contig/Contig-U15113-1Q.Seq.d
(981 letters)

Database: ddbj_A
92,845,959 sequences; 95,242,211,685 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value N

(C23649) Dictyostelium discoideum gamete cDNA, clone FC-AG06. 559 0.0 2
(AU264486) Dictyostelium discoideum vegetative cDNA clone:VS... 464 0.0 2
(AU264130) Dictyostelium discoideum vegetative cDNA clone:VS... 464 0.0 2
(AU263554) Dictyostelium discoideum vegetative cDNA clone:VS... 464 0.0 2
(AU264800) Dictyostelium discoideum vegetative cDNA clone:VS... 464 0.0 2
(AU268305) Dictyostelium discoideum vegetative cDNA clone:VS... 464 0.0 2
(AU269584) Dictyostelium discoideum vegetative cDNA clone:VS... 464 0.0 2
(AU270818) Dictyostelium discoideum vegetative cDNA clone:VS... 464 0.0 2
(BJ420352) Dictyostelium discoideum cDNA clone:ddv39d02, 5' ... 464 0.0 2
(BJ426843) Dictyostelium discoideum cDNA clone:ddv60n08, 5' ... 464 0.0 2
(BJ424812) Dictyostelium discoideum cDNA clone:ddv53m15, 5' ... 464 0.0 2
(BJ418874) Dictyostelium discoideum cDNA clone:ddv34f10, 5' ... 464 0.0 2
(AU261643) Dictyostelium discoideum vegetative cDNA clone:VS... 464 0.0 2
(BJ424320) Dictyostelium discoideum cDNA clone:ddv52g01, 5' ... 464 0.0 2
(BJ417344) Dictyostelium discoideum cDNA clone:ddv30e08, 5' ... 456 0.0 2
(AU265343) Dictyostelium discoideum vegetative cDNA clone:VS... 464 0.0 3
(AU270245) Dictyostelium discoideum vegetative cDNA clone:VS... 464 0.0 2
(AU264487) Dictyostelium discoideum vegetative cDNA clone:VS... 464 0.0 2
(AU264131) Dictyostelium discoideum vegetative cDNA clone:VS... 464 0.0 2
(AU270208) Dictyostelium discoideum vegetative cDNA clone:VS... 464 0.0 2
(AU269585) Dictyostelium discoideum vegetative cDNA clone:VS... 464 0.0 2
(AU264186) Dictyostelium discoideum vegetative cDNA clone:VS... 464 0.0 2
(AU263555) Dictyostelium discoideum vegetative cDNA clone:VS... 464 0.0 2
(AU270207) Dictyostelium discoideum vegetative cDNA clone:VS... 464 0.0 3
(AU270526) Dictyostelium discoideum vegetative cDNA clone:VS... 464 0.0 3
(AU264185) Dictyostelium discoideum vegetative cDNA clone:VS... 464 0.0 3
(AU269119) Dictyostelium discoideum vegetative cDNA clone:VS... 464 0.0 2
(AU265276) Dictyostelium discoideum vegetative cDNA clone:VS... 464 0.0 2
(BJ437453) Dictyostelium discoideum cDNA clone:ddv34f10, 3' ... 464 0.0 2
(BJ443155) Dictyostelium discoideum cDNA clone:ddv52g01, 3' ... 464 0.0 2
(AU269349) Dictyostelium discoideum vegetative cDNA clone:VS... 414 0.0 3
(AU266716) Dictyostelium discoideum vegetative cDNA clone:VS... 337 0.0 4
(AU268306) Dictyostelium discoideum vegetative cDNA clone:VS... 464 0.0 3
(AU270527) Dictyostelium discoideum vegetative cDNA clone:VS... 414 0.0 3
(AU270819) Dictyostelium discoideum vegetative cDNA clone:VS... 464 0.0 3
(AU265277) Dictyostelium discoideum vegetative cDNA clone:VS... 464 0.0 3
(AU264801) Dictyostelium discoideum vegetative cDNA clone:VS... 464 0.0 3
(AU265344) Dictyostelium discoideum vegetative cDNA clone:VS... 278 0.0 5
(BJ445722) Dictyostelium discoideum cDNA clone:ddv60n08, 3' ... 464 0.0 2
(BJ443657) Dictyostelium discoideum cDNA clone:ddv53m15, 3' ... 464 0.0 4
(BJ438964) Dictyostelium discoideum cDNA clone:ddv39d02, 3' ... 464 0.0 2
(AU262349) Dictyostelium discoideum vegetative cDNA clone:VS... 375 0.0 2
(AU060908) Dictyostelium discoideum slug cDNA, clone SLC210. 367 0.0 3
(AU269348) Dictyostelium discoideum vegetative cDNA clone:VS... 464 e-157 2
(AU266869) Dictyostelium discoideum vegetative cDNA clone:VS... 464 e-141 2
(AU270244) Dictyostelium discoideum vegetative cDNA clone:VS... 375 e-140 2
(AU269118) Dictyostelium discoideum vegetative cDNA clone:VS... 464 e-128 2
(BJ419525) Dictyostelium discoideum cDNA clone:ddv36j11, 5' ... 464 e-126 1
(BJ438105) Dictyostelium discoideum cDNA clone:ddv36j11, 3' ... 442 e-119 1
(C90674) Dictyostelium discoideum slug cDNA, clone SSJ607. 351 e-101 3
(AU261684) Dictyostelium discoideum vegetative cDNA clone:VS... 375 2e-99 1
(AU034488) Dictyostelium discoideum slug cDNA, clone SLC210. 335 4e-97 2
(AU262355) Dictyostelium discoideum vegetative cDNA clone:VS... 347 4e-97 2
(AU262213) Dictyostelium discoideum vegetative cDNA clone:VS... 367 5e-97 1
(AU261486) Dictyostelium discoideum vegetative cDNA clone:VS... 367 5e-97 1
(AU263459) Dictyostelium discoideum vegetative cDNA clone:VS... 353 8e-93 1
(AU074137) Dictyostelium discoideum slug cDNA, clone SSJ607. 351 3e-92 1
(AU262408) Dictyostelium discoideum vegetative cDNA clone:VS... 315 2e-81 1
(AU265787) Dictyostelium discoideum vegetative cDNA clone:VS... 159 2e-34 1
(AR550452) Sequence 5583 from patent US 6747137. 96 1e-31 4
(AX073202) Sequence 313 from Patent WO0102550. 96 3e-30 4
(AL033497) C.albicans cosmid Ca49C10. 96 6e-26 4
(EA265043) Sequence 57 from patent US 7241613. 96 6e-26 4
(FE855897) CAFU1113.rev CAFU Pichia stipitis oxygen limited ... 86 5e-25 4
(FE855898) CAFU1113.fwd CAFU Pichia stipitis oxygen limited ... 86 6e-25 4
(FE856968) CAFU914.rev CAFU Pichia stipitis oxygen limited d... 86 6e-25 4
(FE846403) CAFI716.rev CAFI Pichia stipitis aerobic dextrose... 86 6e-25 4
(FE851519) CAFP1757.fwd CAFP Pichia stipitis aerobic xylose ... 86 7e-25 4
(FE856763) CAFU803.rev CAFU Pichia stipitis oxygen limited d... 86 7e-25 4
(FE855727) CAFU1022.rev CAFU Pichia stipitis oxygen limited ... 86 7e-25 4
(FE844478) CAFH437.rev CAFH Pichia stipitis aerobic dextrose... 86 7e-25 4
(FE856969) CAFU914.fwd CAFU Pichia stipitis oxygen limited d... 86 7e-25 4
(FE851267) CAFP1627.rev CAFP Pichia stipitis aerobic xylose ... 86 7e-25 4
(FE855728) CAFU1022.fwd CAFU Pichia stipitis oxygen limited ... 86 7e-25 4
(FE847498) CAFN722.fwd CAFN Pichia stipitis aerobic xylose H... 86 7e-25 4
(FE856764) CAFU803.fwd CAFU Pichia stipitis oxygen limited d... 86 7e-25 4
(FE851268) CAFP1627.fwd CAFP Pichia stipitis aerobic xylose ... 86 8e-25 4
(FE860442) CAFY634.fwd CAFY Pichia stipitis oxygen limited x... 86 8e-25 4
(FE850599) CAFP1266.fwd CAFP Pichia stipitis aerobic xylose ... 86 8e-25 4
(FE860441) CAFY634.rev CAFY Pichia stipitis oxygen limited x... 86 8e-25 4
(FE850598) CAFP1266.rev CAFP Pichia stipitis aerobic xylose ... 86 8e-25 4
(FE846404) CAFI716.fwd CAFI Pichia stipitis aerobic dextrose... 86 8e-25 4
(FE844479) CAFH437.fwd CAFH Pichia stipitis aerobic dextrose... 86 8e-25 4
(EC762481) PSE00004762 rw_mgpallid Polysphondylium pallidum ... 84 1e-24 3
(EC762545) PSE00006875 rw_mgpallid Polysphondylium pallidum ... 84 1e-24 3
(EC761969) PSE00007145 rw_mgpallid Polysphondylium pallidum ... 84 2e-24 3
(FE856071) CAFU437.fwd CAFU Pichia stipitis oxygen limited d... 86 2e-24 4
(EC761453) PSE00004885 rw_mgpallid Polysphondylium pallidum ... 84 1e-21 2
(EC761200) PSE00000451 rw_mgpallid Polysphondylium pallidum ... 84 3e-21 2
(EC762007) PSE00003398 rw_mgpallid Polysphondylium pallidum ... 84 1e-20 2
(AU268788) Dictyostelium discoideum vegetative cDNA clone:VS... 101 5e-17 1
(DY365156) ZO__Ee0003P14.r ZO__Ee Zingiber officinale cDNA c... 96 3e-15 1
(DY365155) ZO__Ee0003P14.f ZO__Ee Zingiber officinale cDNA c... 96 3e-15 1
(CP000500) Pichia stipitis CBS 6054 chromosome 6, complete s... 86 5e-15 4
(EC760457) PSE00003746 rw_mgpallid Polysphondylium pallidum ... 84 1e-14 2
(CN754004) ID0AAA11DB05RM1 ApMS Acyrthosiphon pisum cDNA clo... 52 2e-13 3
(CV850004) ID0AEE9DE11RM2 ID0AEE Acyrthosiphon pisum cDNA cl... 52 3e-13 3
(CN583709) USDA-FP_126774 Acyrthosiphon pisum, Pea Aphid Acy... 52 4e-13 3
(CV834153) ID0ACC24DD02RM1 ID0ACC Acyrthosiphon pisum cDNA c... 52 5e-13 3
(CV833249) ID0ACC22BD06RM1 ID0ACC Acyrthosiphon pisum cDNA c... 52 5e-13 3

>(C23649) Dictyostelium discoideum gamete cDNA, clone FC-AG06.
Length = 542

Score = 559 bits (282), Expect(2) = 0.0
Identities = 288/289 (99%)
Strand = Plus / Minus


Query: 254 ggtgataagcaacgattgatttagcgatagcttgtctgatggcgtagatttgagcgactg 313
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 289 ggtgataagcaacgattgatttagcgatagcttgtctgatggcgtagatttgagcgactg 230


Query: 314 aaccaccacctctgactctaacacggatatcaacttgtgagaaaacatctttaccaacaa 373
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 229 aaccaccacctctgactctaacacggatatcaacttgtgagaaaacatctttaccaacaa 170


Query: 374 ttaagactggttcgtaaacttttaattttaaggnctttggttggatgaattctaatggga 433
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 169 ttaagactggttcgtaaacttttaattttaaggnctttggttggatgaattctaatggga 110


Query: 434 caccattaactttgattaaacctttaccgtcgctgttgcttatgctaccaacggtaaagg 493
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 109 caccattaactttgattaaacctttaccgtcgctgttgcttatgctaccaacggtaaagg 50


Query: 494 tttaatcaaagttaatggtgtcccattagaattcatccaaccaaagaac 542
||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 49 tttaatcaaagttaatggtgttccattagaattcatccaaccaaagaac 1

Score = 375 bits (189), Expect(2) = 0.0
Identities = 189/189 (100%)
Strand = Plus / Minus


Query: 19 gaaattccaataaacgaatctttattatatacaaattgtaaagatacgaaaaaaggttga 78
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 524 gaaattccaataaacgaatctttattatatacaaattgtaaagatacgaaaaaaggttga 465


Query: 79 aaacatactgataatttgagagattaacggtatgatttttggaatctggctctggcacca 138
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 464 aaacatactgataatttgagagattaacggtatgatttttggaatctggctctggcacca 405


Query: 139 cgaccaccaaatttctttggttcacatctacgtggatcagcaactaagagagatctgtcg 198
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 404 cgaccaccaaatttctttggttcacatctacgtggatcagcaactaagagagatctgtcg 345


Query: 199 taatctaag 207
|||||||||
Sbjct: 344 taatctaag 336

Score = 402 bits (203), Expect(3) = 0.0
Identities = 208/210 (99%)
Strand = Plus / Plus


Query: 484 acggtaaaggtttaatcaaagttaatggtgtcccattagaattcatccaaccaaagaact 543
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 80 acggtaaaggtttaatcaaagttaatggtgtcccattagaattcatccaaccaaagncct 139


Query: 544 taaaattaaaagtttacgaaccagtcttaattgttggtaaagatgttttctcacaagttg 603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 140 taaaattaaaagtttacgaaccagtcttaattgttggtaaagatgttttctcacaagttg 199


Query: 604 atatccgtgttagagtcagaggtggtggttcagtcgctcaaatctacgccatcagacaag 663
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 200 atatccgtgttagagtcagaggtggtggttcagtcgctcaaatctacgccatcagacaag 259


Query: 664 ctatcgctaaatcaatcgttgcttatcacc 693
||||||||||||||||||||||||||||||
Sbjct: 260 ctatcgctaaatcaatcgttgcttatcacc 289

Score = 375 bits (189), Expect(3) = 0.0
Identities = 189/189 (100%)
Strand = Plus / Plus


Query: 740 cttagattacgacagatctctcttagttgctgatccacgtagatgtgaaccaaagaaatt 799
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 336 cttagattacgacagatctctcttagttgctgatccacgtagatgtgaaccaaagaaatt 395


Query: 800 tggtggtcgtggtgccagagccagattccaaaaatcataccgttaatctctcaaattatc 859
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 396 tggtggtcgtggtgccagagccagattccaaaaatcataccgttaatctctcaaattatc 455


Query: 860 agtatgttttcaaccttttttcgtatctttacaatttgtatataataaagattcgtttat 919
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 456 agtatgttttcaaccttttttcgtatctttacaatttgtatataataaagattcgtttat 515


Query: 920 tggaatttc 928
|||||||||
Sbjct: 516 tggaatttc 524

Score = 103 bits (52), Expect(3) = 0.0
Identities = 55/56 (98%)
Strand = Plus / Plus


Query: 408 ctttggttggatgaattctaatgggacaccattaactttgattaaacctttaccgt 463
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 4 ctttggttggatgaattctaatggaacaccattaactttgattaaacctttaccgt 59

Lambda K H
1.37 0.711 1.31

Matrix: blastn matrix:1 -3
Number of Sequences: 92845959
Number of Hits to DB: 814,745,172
Number of extensions: 46202194
Number of successful extensions: 3830681
Number of sequences better than 10.0: 1654
Length of query: 981
Length of database: 95,242,211,685
Length adjustment: 24
Effective length of query: 957
Effective length of database: 97,308,875,965
Effective search space: 93124594298505
Effective search space used: 93124594298505
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)

protein update 2009. 7.14
Homology vs Protein
Query= Contig-U15113-1 (Contig-U15113-1Q) /CSM_Contig/Contig-U15113-1Q.Seq.d
(981 letters)

Database: nrp_B
3,236,559 sequences; 1,051,180,864 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value

(A2ZB00) RecName: Full=40S ribosomal protein S16; &(Q0IQF7) Rec... 187 5e-46
EU963976_1(EU963976|pid:none) Zea mays clone 274739 40S ribosoma... 187 6e-46
AY144855_1(AY144855|pid:none) Saccharomyces bayanus RPS16 gene, ... 186 1e-45
AC136449_19(AC136449|pid:none) Medicago truncatula clone mth2-11... 186 1e-45
DQ066260_1(DQ066260|pid:none) Ixodes scapularis isolate ISN-L-14... 185 2e-45
AY144854_1(AY144854|pid:none) Saccharomyces bayanus RPS16 gene, ... 184 3e-45
L36313_1(L36313|pid:none) Oryza sativa ribosomal protein S16 mRN... 184 4e-45
EU558300_1(EU558300|pid:none) Novocrania anomala putative 40S ri... 184 4e-45
AM270013_6(AM270013|pid:none) Aspergillus niger contig An02c0180... 184 5e-45
EU969045_1(EU969045|pid:none) Zea mays clone 325768 40S ribosoma... 184 5e-45
AM920437_2098(AM920437|pid:none) Penicillium chrysogenum Wiscons... 184 5e-45
BT052869_1(BT052869|pid:none) Medicago truncatula clone MTYFL_FM... 183 7e-45
AC141922_18(AC141922|pid:none) Medicago truncatula clone mth2-9n... 183 7e-45
(Q6FR56) RecName: Full=40S ribosomal protein S16; &CR380955_27(... 183 9e-45
DQ886800_1(DQ886800|pid:none) Argas monolakensis ribosomal prote... 183 9e-45
AY145016_1(AY145016|pid:none) Saccharomyces kluyveri clone P2220... 183 9e-45
EU112909_1(EU112909|pid:none) Helianthus annuus genotype rha801 ... 182 1e-44
EU112892_1(EU112892|pid:none) Helianthus annuus genotype ha52 40... 182 1e-44
EF084575_1(EF084575|pid:none) Picea sitchensis clone WS02722_B16... 182 1e-44
M11408_1(M11408|pid:none) Mouse S16 ribosomal protein gene, comp... 182 2e-44
AB017604_1(AB017604|pid:none) Schizosaccharomyces pombe mRNA for... 182 2e-44
AF227979_1(AF227979|pid:none) Euphorbia esula 40S ribosomal prot... 182 2e-44
(O60144) RecName: Full=40S ribosomal protein S16; &AL022304_14(... 182 2e-44
CP001324_458(CP001324|pid:none) Micromonas sp. RCC299 chromosome... 181 3e-44
DQ213536_1(DQ213536|pid:none) Taeniopygia guttata clone 0063P002... 181 3e-44
R3MS16(S11623;S11619)ribosomal protein S16 - mouse 181 3e-44
BC084534_1(BC084534|pid:none) Xenopus tropicalis ribosomal prote... 181 3e-44
CR382128_497(CR382128|pid:none) Yarrowia lipolytica strain CLIB1... 181 3e-44
(Q6BSI7) RecName: Full=40S ribosomal protein S16; &CR382136_360... 181 3e-44
(Q7SFJ9) RecName: Full=40S ribosomal protein S16; 181 4e-44
AY144956_1(AY144956|pid:none) Saccharomyces castellii clone Cont... 181 4e-44
(P14131) RecName: Full=40S ribosomal protein S16; &(P62249) Rec... 180 6e-44
BC159438_1(BC159438|pid:none) Rattus norvegicus ribosomal protei... 180 6e-44
AK340188_1(AK340188|pid:none) Acyrthosiphon pisum ACYPI009856 mR... 180 6e-44
BC064030_1(BC064030|pid:none) Rattus norvegicus ribosomal protei... 180 6e-44
(O94017) RecName: Full=40S ribosomal protein S16; &AL033497_1(A... 180 6e-44
EF179419_1(EF179419|pid:none) Xenopsylla cheopis clone XC-187 40... 180 6e-44
AY892164_1(AY892164|pid:none) Synthetic construct Homo sapiens c... 180 6e-44
BC090618_1(BC090618|pid:none) Mus musculus ribosomal protein S16... 180 6e-44
CP000500_168(CP000500|pid:none) Pichia stipitis CBS 6054 chromos... 180 8e-44
AY961538_1(AY961538|pid:none) Lysiphlebus testaceipes ribosomal ... 180 8e-44
(P46293) RecName: Full=40S ribosomal protein S16; &S41193(S4119... 179 1e-43
EF144443_1(EF144443|pid:none) Populus trichocarpa clone PX0019_I... 179 1e-43
BT075417_1(BT075417|pid:none) Osmerus mordax clone omor-eva-002-... 179 1e-43
BT058360_1(BT058360|pid:none) Salmo salar clone Contig4385 40S r... 179 1e-43
(Q98TR7) RecName: Full=40S ribosomal protein S16; &AY027434_1(A... 179 1e-43
EF144734_1(EF144734|pid:none) Populus trichocarpa clone WS01117_... 179 1e-43
(O22647) RecName: Full=40S ribosomal protein S16; &AF031546_1(A... 179 1e-43
AY769332_1(AY769332|pid:none) Bombyx mori ribosomal protein S16 ... 179 2e-43
CU928180_648(CU928180|pid:none) Kluyveromyces thermotolerans str... 178 3e-43
(Q90YQ7) RecName: Full=40S ribosomal protein S16; &AF402825_1(A... 178 3e-43
BT056852_1(BT056852|pid:none) Salmo salar clone ssal-eve-564-169... 178 3e-43
EF082321_1(EF082321|pid:none) Picea sitchensis clone WS0276_F04 ... 177 4e-43
(Q42340) RecName: Full=40S ribosomal protein S16-3; &AF370178_1... 177 4e-43
AY826142_1(AY826142|pid:none) Aedes albopictus clone AL_16240 ri... 177 4e-43
(Q9SK22) RecName: Full=40S ribosomal protein S16-1; &AC006586_5... 177 5e-43
(Q876B4) RecName: Full=40S ribosomal protein S16; &AY144901_1(A... 177 5e-43
EU124941_1(EU124941|pid:none) Arenicola marina ribosomal protein... 177 5e-43
BT056525_1(BT056525|pid:none) Salmo salar clone ssal-evf-560-035... 177 6e-43
BT057348_1(BT057348|pid:none) Salmo salar clone ssal-evd-573-254... 176 8e-43
EU574846_1(EU574846|pid:none) Ornithodoros coriaceus clone OC-43... 176 8e-43
(P62251) RecName: Full=40S ribosomal protein S16; &AY552053_1(A... 176 1e-42
CU633438_869(CU633438|pid:none) Podospora anserina genomic DNA c... 175 2e-42
BT073876_1(BT073876|pid:none) Oncorhynchus mykiss clone omyk-evo... 175 2e-42
AY815342_1(AY815342|pid:none) Schistosoma japonicum SJCHGC06252 ... 174 3e-42
(P16149) RecName: Full=40S ribosomal protein S16; &R3YL16(S1500... 174 4e-42
EU965554_1(EU965554|pid:none) Zea mays clone 286889 unknown mRNA. 174 5e-42
(Q22054) RecName: Full=40S ribosomal protein S16; &T24280(T2428... 174 5e-42
EU726787_1(EU726787|pid:none) Caenorhabditis brenneri clone 4C5.... 174 5e-42
FN392322_431(FN392322|pid:none) Pichia pastoris GS115 chromosome... 173 7e-42
AY857474_1(AY857474|pid:none) Suberites domuncula S16 mRNA, comp... 173 9e-42
EU139184_1(EU139184|pid:none) Flustra foliacea putative 40S ribo... 172 1e-41
(Q9M8X9) RecName: Full=40S ribosomal protein S16-2; &AC016829_1... 172 1e-41
AM910996_242(AM910996|pid:none) Plasmodium knowlesi strain H chr... 172 2e-41
FJ236324_1(FJ236324|pid:none) Cavia porcellus ribosomal protein ... 169 1e-40
EF134326_1(EF134326|pid:none) Oxyrrhis marina isolate Om-5p-9-1 ... 169 2e-40
AF548333_1(AF548333|pid:none) Branchiostoma belcheri ribosomal p... 169 2e-40
EU125002_1(EU125002|pid:none) Eurythoe complanata ribosomal prot... 164 3e-39
AE017342_277(AE017342|pid:none) Cryptococcus neoformans var. neo... 162 2e-38
AM849497_1(AM849497|pid:none) Pomphorhynchus laevis partial mRNA... 161 3e-38
AF083031_130(AF083031|pid:none) Guillardia theta nucleomorph chr... 160 5e-38
AX885241_1(AX885241|pid:none) Sequence 1104 from Patent EP1033401. 160 5e-38
EU081832_1(EU081832|pid:none) Perca flavescens ribosomal protein... 155 3e-36
CP000881_132(CP000881|pid:none) Hemiselmis andersenii chromosome... 147 5e-34
AB370121_1(AB370121|pid:none) Rosa hybrid cultivar RhRPS16 mRNA ... 141 3e-32
AM494963_89(AM494963|pid:none) Leishmania braziliensis chromosom... 132 1e-29
AM502244_85(AM502244|pid:none) Leishmania infantum chromosome 26... 132 2e-29
DQ158857_17(DQ158857|pid:none) Bigelowiella natans nucleomorph c... 130 9e-29
AF481058_1(AF481058|pid:none) Aplysia californica 40S ribosomal ... 127 8e-28
AY849625_1(AY849625|pid:none) Magnaporthe grisea 40S ribosomal p... 126 1e-27
(O26146) RecName: Full=Fused L13/S9 ribosomal protein; Includes:... 117 8e-25
AM180088_2005(AM180088|pid:none) Haloquadratum walsbyi DSM 16790... 110 7e-23
(P54024) RecName: Full=30S ribosomal protein S9P; &D64324(D6432... 108 2e-22
AY550068_1(AY550068|pid:none) Sus scrofa 40S ribosomal protein S... 108 4e-22
CP000099_1391(CP000099|pid:none) Methanosarcina barkeri str. Fus... 107 6e-22
(Q2NFZ9) RecName: Full=30S ribosomal protein S9P; &CP000102_834... 107 6e-22
CR936257_1414(CR936257|pid:none) Natronomonas pharaonis DSM 2160... 107 8e-22
(Q8PW44) RecName: Full=30S ribosomal protein S9P; &AE008384_175... 107 8e-22
CP000505_277(CP000505|pid:none) Thermofilum pendens Hrk 5, compl... 105 2e-21
(Q8TT42) RecName: Full=30S ribosomal protein S9P; &AE010299_587... 105 2e-21
CP001365_1795(CP001365|pid:none) Halorubrum lacusprofundi ATCC 4... 105 3e-21
(A0B6E8) RecName: Full=30S ribosomal protein S9P; &CP000477_469... 104 5e-21
CP000575_805(CP000575|pid:none) Staphylothermus marinus F1, comp... 103 9e-21
(A4FWK9) RecName: Full=30S ribosomal protein S9P; &CP000609_267... 103 1e-20
(Q9YB48) RecName: Full=30S ribosomal protein S9P; 103 1e-20
(Q9HQJ2) RecName: Full=30S ribosomal protein S9P; &AM774415_921... 103 1e-20
(A6VGR2) RecName: Full=30S ribosomal protein S9P; &CP000745_565... 103 1e-20
A72558(A72558) probable ribosomal protein S9 APE1749 - Aeropyrum... 103 1e-20
(P05763) RecName: Full=30S ribosomal protein S9P; AltName: Full=... 102 2e-20
(Q6LXM5) RecName: Full=30S ribosomal protein S9P; &BX950229_132... 102 3e-20
CP000866_421(CP000866|pid:none) Nitrosopumilus maritimus SCM1, c... 100 6e-20
(Q8U0E7) RecName: Full=30S ribosomal protein S9P; &AE009950_164... 100 1e-19
CP000968_1573(CP000968|pid:none) Candidatus Korarchaeum cryptofi... 100 1e-19
(Q9V195) RecName: Full=30S ribosomal protein S9P; &AJ248284_237... 99 2e-19
AM114193_2810(AM114193|pid:none) Uncultured methanogenic archaeo... 98 5e-19
CP000300_2217(CP000300|pid:none) Methanococcoides burtonii DSM 6... 97 8e-19
EF083057_1(EF083057|pid:none) Picea sitchensis clone WS02717_E06... 96 2e-18
CP000562_1797(CP000562|pid:none) Methanoculleus marisnigri JR1, ... 94 5e-18
CP000855_110(CP000855|pid:none) Thermococcus onnurineus NA1, com... 94 5e-18
CP001398_1964(CP001398|pid:none) Thermococcus gammatolerans EJ3,... 94 5e-18
CP000561_2075(CP000561|pid:none) Pyrobaculum calidifontis JCM 11... 94 5e-18
(A6UW00) RecName: Full=30S ribosomal protein S9P; &CP000743_107... 94 7e-18
CP001338_2267(CP001338|pid:none) Candidatus Methanosphaerula pal... 94 9e-18
(Q979K1) RecName: Full=30S ribosomal protein S9P; &BA000011_116... 92 2e-17
EU016645_40(EU016645|pid:none) Uncultured Group I marine crenarc... 92 2e-17
EU016660_30(EU016660|pid:none) Uncultured Group I marine crenarc... 91 5e-17
AY192166_1(AY192166|pid:none) Leishmania enriettii ribosomal pro... 91 8e-17
CP000780_2209(CP000780|pid:none) Candidatus Methanoregula boonei... 90 1e-16
CP000504_688(CP000504|pid:none) Pyrobaculum islandicum DSM 4184,... 89 2e-16
CP000660_2257(CP000660|pid:none) Pyrobaculum arsenaticum DSM 135... 89 2e-16
CP000559_1232(CP000559|pid:none) Methanocorpusculum labreanum Z,... 88 5e-16
(Q6L293) RecName: Full=30S ribosomal protein S9P; &AE017261_324... 87 7e-16
(P95992) RecName: Full=30S ribosomal protein S9P; 87 9e-16
CP001400_1900(CP001400|pid:none) Sulfolobus islandicus M.14.25, ... 87 1e-15
(Q96YW3) RecName: Full=30S ribosomal protein S9P; &BA000023_222... 87 1e-15
CP000682_2104(CP000682|pid:none) Metallosphaera sedula DSM 5348,... 86 1e-15
CP001401_1968(CP001401|pid:none) Sulfolobus islandicus M.16.27, ... 84 6e-15
BC071674_1(BC071674|pid:none) Homo sapiens ribosomal protein S16... 84 7e-15
AE004437_879(AE004437|pid:none) Halobacterium sp. NRC-1, complet... 81 5e-14
AE009441_451(AE009441|pid:none) Pyrobaculum aerophilum str. IM2,... 81 5e-14
AE017199_435(AE017199|pid:none) Nanoarchaeum equitans Kin4-M, co... 78 5e-13
AK097937_1(AK097937|pid:none) Homo sapiens cDNA FLJ40618 fis, cl... 71 5e-11
BT079353_1(BT079353|pid:none) Esox lucius clone eluc-evq-505-197... 67 9e-10
CP001055_1524(CP001055|pid:none) Elusimicrobium minutum Pei191, ... 66 2e-09
(A0LXM9) RecName: Full=30S ribosomal protein S9; &CU207366_133(... 65 3e-09
(A0LIV3) RecName: Full=30S ribosomal protein S9; &CP000478_1651... 64 6e-09
CP001101_1935(CP001101|pid:none) Chlorobium phaeobacteroides BS1... 64 6e-09
CP000975_2358(CP000975|pid:none) Methylacidiphilum infernorum V4... 64 8e-09
CP000252_336(CP000252|pid:none) Syntrophus aciditrophicus SB, co... 64 1e-08
CP001100_529(CP001100|pid:none) Chloroherpeton thalassium ATCC 3... 62 4e-08
EU016560_9(EU016560|pid:none) Uncultured marine microorganism HF... 60 9e-08
(Q3B5U1) RecName: Full=30S ribosomal protein S9; &CP000096_398(... 60 1e-07
BX908798_1756(BX908798|pid:none) Parachlamydia-related symbiont ... 60 1e-07
CP000908_2583(CP000908|pid:none) Methylobacterium extorquens PA1... 60 1e-07
CP000048_325(CP000048|pid:none) Borrelia hermsii DAH, complete g... 60 1e-07
AE017226_846(AE017226|pid:none) Treponema denticola ATCC 35405, ... 60 1e-07
(B8DPL8) RecName: Full=30S ribosomal protein S9; &CP001197_963(... 60 1e-07
(Q1MQW3) RecName: Full=30S ribosomal protein S9; &AM180252_559(... 59 2e-07
CP001099_417(CP001099|pid:none) Chlorobaculum parvum NCIB 8327, ... 59 3e-07
AY967331_1(AY967331|pid:none) Synthetic construct isolate FTT127... 58 4e-07
AJ749949_1274(AJ749949|pid:none) Francisella tularensis subsp. t... 58 4e-07
(A9BHB5) RecName: Full=30S ribosomal protein S9; &CP000879_775(... 58 4e-07
CP001279_1356(CP001279|pid:none) Nautilia profundicola AmH, comp... 58 6e-07
BX293980_678(BX293980|pid:none) Mycoplasma mycoides subsp. mycoi... 57 7e-07
CP001071_1213(CP001071|pid:none) Akkermansia muciniphila ATCC BA... 57 1e-06
BX842647_112(BX842647|pid:none) Bdellovibrio bacteriovorus compl... 57 1e-06
(Q5P7T8) RecName: Full=30S ribosomal protein S9; &CR555306_501(... 57 1e-06
AY909423_1(AY909423|pid:none) Siniperca chuatsi clone C445 ribos... 57 1e-06
CP001358_1050(CP001358|pid:none) Desulfovibrio desulfuricans sub... 57 1e-06
CP000113_1943(CP000113|pid:none) Myxococcus xanthus DK 1622, com... 56 2e-06
(Q5L5W2) RecName: Full=30S ribosomal protein S9; &CR848038_512(... 56 2e-06
(Q9PKR2) RecName: Full=30S ribosomal protein S9; &AE002160_392(... 56 2e-06
(Q254P0) RecName: Full=30S ribosomal protein S9; &AP006861_476(... 55 3e-06
(O84128) RecName: Full=30S ribosomal protein S9; &(Q3KMP3) RecN... 55 3e-06
(Q0SNH4) RecName: Full=30S ribosomal protein S9; &CP000395_339(... 55 3e-06
(A9KBY1) RecName: Full=30S ribosomal protein S9; &(A9NAB0) RecN... 55 3e-06
(B7J1R3) RecName: Full=30S ribosomal protein S9; &(O51313) RecN... 55 3e-06
CP000976_329(CP000976|pid:none) Borrelia duttonii Ly, complete g... 55 3e-06
CP000943_4363(CP000943|pid:none) Methylobacterium sp. 4-46, comp... 55 3e-06
CP000934_2722(CP000934|pid:none) Cellvibrio japonicus Ueda107, c... 55 3e-06
(Q661S9) RecName: Full=30S ribosomal protein S9; &CP000013_333(... 55 3e-06
AE014297_674(AE014297|pid:none) Drosophila melanogaster chromoso... 55 3e-06
CP000473_890(CP000473|pid:none) Solibacter usitatus Ellin6076, c... 55 4e-06
AE017354_2656(AE017354|pid:none) Legionella pneumophila subsp. p... 55 4e-06
(Q6F0X3) RecName: Full=30S ribosomal protein S9; &AE017263_494(... 55 4e-06
CP000607_450(CP000607|pid:none) Chlorobium phaeovibrioides DSM 2... 55 5e-06
(Q822Z3) RecName: Full=30S ribosomal protein S9; &AE015925_523(... 55 5e-06
(A2SKM0) RecName: Full=30S ribosomal protein S9; &CP000555_3147... 55 5e-06
(Q0AHZ9) RecName: Full=30S ribosomal protein S9; &CP000450_740(... 54 6e-06
CP001107_2910(CP001107|pid:none) Eubacterium rectale ATCC 33656,... 54 6e-06
CP001357_2134(CP001357|pid:none) Brachyspira hyodysenteriae WA1,... 54 6e-06
(Q87DD4) RecName: Full=30S ribosomal protein S9; &AE009442_712(... 54 6e-06
(A6LPU7) RecName: Full=30S ribosomal protein S9; &CP000721_187(... 54 8e-06
(Q7MX42) RecName: Full=30S ribosomal protein S9; &AE015924_325(... 54 1e-05
CP001010_1335(CP001010|pid:none) Polynucleobacter necessarius su... 53 1e-05
(B6JPI5) RecName: Full=30S ribosomal protein S9; &CP001217_86(C... 53 1e-05
(A1K970) RecName: Full=30S ribosomal protein S9; 53 2e-05
CP000655_1875(CP000655|pid:none) Polynucleobacter necessarius su... 53 2e-05
CP000932_375(CP000932|pid:none) Campylobacter lari RM2100, compl... 53 2e-05
(Q9KGD4) RecName: Full=30S ribosomal protein S9; &A83671(A83671... 53 2e-05
(B5Z683) RecName: Full=30S ribosomal protein S9; &(P66637) RecN... 52 2e-05
CP000771_425(CP000771|pid:none) Fervidobacterium nodosum Rt17-B1... 52 2e-05
(Q7WFC4) RecName: Full=30S ribosomal protein S9; &BX640450_105(... 52 2e-05
(Q5WLM8) RecName: Full=30S ribosomal protein S9; &AP006627_184(... 52 2e-05
(Q1XDJ7) RecName: Full=30S ribosomal protein S9, chloroplastic; ... 52 2e-05
CP001349_143(CP001349|pid:none) Methylobacterium nodulans ORS 20... 52 2e-05
(Q2IEX8) RecName: Full=30S ribosomal protein S9; &CP000251_3360... 52 3e-05
(Q7VIV5) RecName: Full=30S ribosomal protein S9; &AE017125_499(... 52 3e-05
(B2FJU3) RecName: Full=30S ribosomal protein S9; &AM743169_4068... 52 3e-05
CP001280_1832(CP001280|pid:none) Methylocella silvestris BL2, co... 52 3e-05
(P51291) RecName: Full=30S ribosomal protein S9, chloroplastic; ... 52 3e-05
CP001072_77(CP001072|pid:none) Helicobacter pylori Shi470, compl... 52 3e-05
(Q17VT4) RecName: Full=30S ribosomal protein S9; &AM260522_1373... 52 3e-05
(Q1CV71) RecName: Full=30S ribosomal protein S9; &CP000241_85(C... 52 3e-05
CP000792_284(CP000792|pid:none) Campylobacter concisus 13826, co... 52 4e-05
(Q2KV03) RecName: Full=30S ribosomal protein S9; &AM167904_2966... 52 4e-05
CP001001_1159(CP001001|pid:none) Methylobacterium radiotolerans ... 52 4e-05
CP000769_3400(CP000769|pid:none) Anaeromyxobacter sp. Fw109-5, c... 52 4e-05
CP001277_1134(CP001277|pid:none) Candidatus Hamiltonella defensa... 52 4e-05
(A8F8P5) RecName: Full=30S ribosomal protein S9; &CP000812_1956... 51 5e-05
(B7GJ32) RecName: Full=30S ribosomal protein S9; &CP000922_139(... 51 5e-05
(Q7M7R1) RecName: Full=30S ribosomal protein S9; &BX571662_271(... 51 5e-05
(Q82UK1) RecName: Full=30S ribosomal protein S9; &AL954747_1484... 51 7e-05
(A7HXB2) RecName: Full=30S ribosomal protein S9; &CP000774_2922... 51 7e-05
(A9EYT5) RecName: Full=30S ribosomal protein S9; &AM746676_7417... 51 7e-05
(P59514) RecName: Full=30S ribosomal protein S9; &AE016826_328(... 51 7e-05
CP000857_3304(CP000857|pid:none) Salmonella enterica subsp. ente... 51 7e-05
(Q3YX18) RecName: Full=30S ribosomal protein S9; &CP000038_3147... 50 9e-05
(Q83Q07) RecName: Full=30S ribosomal protein S9; &AE005674_3272... 50 9e-05
(Q2RSE4) RecName: Full=30S ribosomal protein S9; &CP000230_2146... 50 9e-05
AM889285_531(AM889285|pid:none) Gluconacetobacter diazotrophicus... 50 9e-05
(A1AGC3) RecName: Full=30S ribosomal protein S9; &(A6TEN8) RecN... 50 9e-05
CP001145_439(CP001145|pid:none) Coprothermobacter proteolyticus ... 50 9e-05
(A0PXY2) RecName: Full=30S ribosomal protein S9; &CP000382_261(... 50 9e-05
(Q0A6F4) RecName: Full=30S ribosomal protein S9; &CP000453_2224... 50 9e-05
CP000783_3517(CP000783|pid:none) Enterobacter sakazakii ATCC BAA... 50 9e-05
(Q9X1G4) RecName: Full=30S ribosomal protein S9; &AE000512_1427... 50 9e-05
AY773199_9(AY773199|pid:none) Synthetic construct 30S ribosomal ... 50 9e-05
(Q2RFT3) RecName: Full=30S ribosomal protein S9; &CP000232_2364... 50 1e-04
(Q5L8W6) RecName: Full=30S ribosomal protein S9; &(Q64P28) RecN... 50 1e-04
CP001600_560(CP001600|pid:none) Edwardsiella ictaluri 93-146, co... 50 1e-04
CP001281_1189(CP001281|pid:none) Thauera sp. MZ1T, complete geno... 50 1e-04
AM422018_496(AM422018|pid:none) Candidatus Phytoplasma australie... 50 1e-04
(B6YQS6) RecName: Full=30S ribosomal protein S9; &AP010656_285(... 50 1e-04
(A9MNY1) RecName: Full=30S ribosomal protein S9; &(A9N839) RecN... 50 1e-04
AE017180_2857(AE017180|pid:none) Geobacter sulfurreducens PCA, c... 50 2e-04
AM286690_577(AM286690|pid:none) Alcanivorax borkumensis SK2, com... 50 2e-04
(B8CIP3) RecName: Full=30S ribosomal protein S9; &CP000472_670(... 50 2e-04
(Q21FV9) RecName: Full=30S ribosomal protein S9; &CP000282_3155... 49 2e-04
(B0RN06) RecName: Full=30S ribosomal protein S9; &(Q4UZF1) RecN... 49 2e-04
(Q13UB3) RecName: Full=30S ribosomal protein S9; &CP000270_3788... 49 2e-04
(Q3BYA8) RecName: Full=30S ribosomal protein S9; &(Q8PQ41) RecN... 49 2e-04
(P62669) RecName: Full=30S ribosomal protein S9; &AE017221_1094... 49 2e-04
(Q8D362) RecName: Full=30S ribosomal protein S9; &BA000021_139(... 49 3e-04
(Q8R7Y9) RecName: Full=30S ribosomal protein S9; &AE008691_2083... 49 3e-04
(P80374) RecName: Full=30S ribosomal protein S9; &AP008226_1464... 49 3e-04
(Q9PD43) RecName: Full=30S ribosomal protein S9; &AE003849_1532... 49 3e-04
CP001577_119(CP001577|pid:none) Micromonas sp. RCC299 chromosome... 49 3e-04
(A1JR92) RecName: Full=30S ribosomal protein S9; &AM286415_3585... 49 3e-04
(B2A4Q7) RecName: Full=30S ribosomal protein S9; &CP001034_230(... 49 3e-04
CU633749_434(CU633749|pid:none) Cupriavidus taiwanensis str. LMG... 49 3e-04
(Q6ANL9) RecName: Full=30S ribosomal protein S9; &CR522870_1326... 49 3e-04
(Q6DAE6) RecName: Full=30S ribosomal protein S9; &BX950851_303(... 49 3e-04
(A1ATL0) RecName: Full=30S ribosomal protein S9; &CP000482_3039... 49 3e-04
(Q31IG5) RecName: Full=30S ribosomal protein S9; &CP000109_461(... 49 3e-04
(A8H8M0) RecName: Full=30S ribosomal protein S9; &CP000851_3578... 49 3e-04
(B0TUV6) RecName: Full=30S ribosomal protein S9; &CP000931_3647... 49 3e-04
(A5I7H0) RecName: Full=30S ribosomal protein S9; &(A7FZ37) RecN... 49 3e-04
(Q220T1) RecName: Full=30S ribosomal protein S9; &CP000267_710(... 49 3e-04
CP001089_3157(CP001089|pid:none) Geobacter lovleyi SZ, complete ... 49 3e-04
(Q475T2) RecName: Full=30S ribosomal protein S9; &CP000090_469(... 49 3e-04
CP000859_945(CP000859|pid:none) Desulfococcus oleovorans Hxd3, c... 49 3e-04
(A1UT84) RecName: Full=30S ribosomal protein S9; &CP000524_848(... 48 4e-04
AP006840_3038(AP006840|pid:none) Symbiobacterium thermophilum IA... 48 4e-04
CP000084_1010(CP000084|pid:none) Candidatus Pelagibacter ubique ... 48 4e-04
CP000517_277(CP000517|pid:none) Lactobacillus helveticus DPC 457... 48 4e-04
(Q03EE9) RecName: Full=30S ribosomal protein S9; &CP000422_1312... 48 4e-04
AM942759_3636(AM942759|pid:none) Proteus mirabilis strain HI4320... 48 6e-04
CP000159_34(CP000159|pid:none) Salinibacter ruber DSM 13855, com... 48 6e-04
(A3DGC4) RecName: Full=30S ribosomal protein S9; &CP000568_1761... 48 6e-04
CP000713_789(CP000713|pid:none) Psychrobacter sp. PRwf-1, comple... 48 6e-04
(A6U7T6) RecName: Full=30S ribosomal protein S9; &CP000738_856(... 48 6e-04
(Q0BZT3) RecName: Full=30S ribosomal protein S9; &CP000158_2276... 48 6e-04
(A4FPH0) RecName: Full=30S ribosomal protein S9; &AM420293_6590... 48 6e-04
(A6SUN8) RecName: Full=30S ribosomal protein S9; &CP000269_295(... 48 6e-04
(Q18CJ5) RecName: Full=30S ribosomal protein S9; &AM180355_110(... 47 8e-04
(O67723) RecName: Full=30S ribosomal protein S9; &A70462(A70462... 47 8e-04
CP001390_3606(CP001390|pid:none) Geobacter sp. FRC-32, complete ... 47 8e-04
AK340503_1(AK340503|pid:none) Acyrthosiphon pisum ACYPI006151 mR... 47 8e-04
(B6IMQ2) RecName: Full=30S ribosomal protein S9; &CP000613_1273... 47 8e-04
(A6LHM6) RecName: Full=30S ribosomal protein S9; &CP000140_3395... 47 8e-04
(Q5F5A4) RecName: Full=30S ribosomal protein S9; &AE004969_1860... 47 8e-04
(Q92QR5) RecName: Full=30S ribosomal protein S9; &AL591688_1247... 47 8e-04
(A8GK02) RecName: Full=30S ribosomal protein S9; &CP000826_4332... 47 0.001
(Q1AU64) RecName: Full=30S ribosomal protein S9; &CP000386_2083... 47 0.001
(A7GK54) RecName: Full=30S ribosomal protein S9; &CP000764_136(... 47 0.001
(Q8A0Z5) RecName: Full=30S ribosomal protein S9; &AE015928_3874... 47 0.001
CP000082_1566(CP000082|pid:none) Psychrobacter arcticus 273-4, c... 47 0.001
CP001146_848(CP001146|pid:none) Dictyoglomus thermophilum H-6-12... 47 0.001
CP001013_3433(CP001013|pid:none) Leptothrix cholodnii SP-6, comp... 47 0.001
(A8FR86) RecName: Full=30S ribosomal protein S9; &CP000821_746(... 47 0.001
CP001562_1115(CP001562|pid:none) Bartonella grahamii as4aup, com... 47 0.001
(P31177) RecName: Full=30S ribosomal protein S9; &AM295250_1693... 47 0.001
R3BS9(S08564)ribosomal protein S9 - Bacillus stearothermophilus 47 0.001
(P82933) RecName: Full=28S ribosomal protein S9, mitochondrial; ... 47 0.001
CP000896_120(CP000896|pid:none) Acholeplasma laidlawii PG-8A, co... 47 0.001
(Q07XR9) RecName: Full=30S ribosomal protein S9; &(Q12RX7) RecN... 47 0.001
(P07842) RecName: Full=30S ribosomal protein S9; AltName: Full=B... 47 0.001
(Q6G3I7) RecName: Full=30S ribosomal protein S9; &BX897699_764(... 47 0.001
(A5GAY7) RecName: Full=30S ribosomal protein S9; &CP000698_1038... 47 0.001
(Q5R0K5) RecName: Full=30S ribosomal protein S9; &AE017340_414(... 47 0.001
(Q5L3Q5) RecName: Full=30S ribosomal protein S9; &BA000043_140(... 47 0.001
(Q2NWI3) RecName: Full=30S ribosomal protein S9; &AP008232_217(... 46 0.002
(A3QI61) RecName: Full=30S ribosomal protein S9; &CP000606_3286... 46 0.002
(Q1MIP3) RecName: Full=30S ribosomal protein S9; &AM236080_1680... 46 0.002
(Q0SQH9) RecName: Full=30S ribosomal protein S9; &(Q0TMT2) RecN... 46 0.002
CP000248_3271(CP000248|pid:none) Novosphingobium aromaticivorans... 46 0.002
(A6Q5F6) RecName: Full=30S ribosomal protein S9; &AP009178_1609... 46 0.002
(B5ZXZ5) RecName: Full=30S ribosomal protein S9; &CP001191_1225... 46 0.002
(Q04QG5) RecName: Full=30S ribosomal protein S9; &(Q054G7) RecN... 46 0.002
(Q03MU5) RecName: Full=30S ribosomal protein S9; &(Q5M1V6) RecN... 46 0.002
(A0KT12) RecName: Full=30S ribosomal protein S9; &(A1RNJ7) RecN... 46 0.002
(A0R8L3) RecName: Full=30S ribosomal protein S9; &(B7HJJ1) RecN... 46 0.002
(A1SA66) RecName: Full=30S ribosomal protein S9; &CP000507_3060... 45 0.003
CP001132_2612(CP001132|pid:none) Acidithiobacillus ferrooxidans ... 45 0.003
CP000510_2709(CP000510|pid:none) Psychromonas ingrahamii 37, com... 45 0.003
(Q04G51) RecName: Full=30S ribosomal protein S9; &CP000411_566(... 45 0.003
FM864216_29(FM864216|pid:none) Mycoplasma conjunctivae HRC/581T ... 45 0.003
CP000860_320(CP000860|pid:none) Candidatus Desulforudis audaxvia... 45 0.003
CP000148_600(CP000148|pid:none) Geobacter metallireducens GS-15,... 45 0.003
(A4IJM1) RecName: Full=30S ribosomal protein S9; &CP000557_138(... 45 0.003
(Q8K9G0) RecName: Full=30S ribosomal protein S9; &AE013218_357(... 45 0.004
(Q035C4) RecName: Full=30S ribosomal protein S9; &CP000423_2332... 45 0.004
(P19459) RecName: Full=30S ribosomal protein S9, chloroplastic; ... 45 0.004
(A8AV68) RecName: Full=30S ribosomal protein S9; &CP000725_356(... 45 0.004
AP009484_228(AP009484|pid:none) Macrococcus caseolyticus JCSC540... 45 0.004
CP001068_358(CP001068|pid:none) Ralstonia pickettii 12J chromoso... 45 0.005
CP001638_143(CP001638|pid:none) Geobacillus sp. WCH70, complete ... 45 0.005
(A4XBI6) RecName: Full=30S ribosomal protein S9; &CP000667_3808... 45 0.005
CP000781_4307(CP000781|pid:none) Xanthobacter autotrophicus Py2,... 45 0.005
(Q2NIP5) RecName: Full=30S ribosomal protein S9; &CP000061_581(... 45 0.005
CP001074_1617(CP001074|pid:none) Rhizobium etli CIAT 652, comple... 45 0.005
CU458896_3722(CU458896|pid:none) Mycobacterium abscessus chromos... 44 0.006
(Q60AF7) RecName: Full=30S ribosomal protein S9; &AE017282_850(... 44 0.006
(A6L0V0) RecName: Full=30S ribosomal protein S9; &CP000139_1584... 44 0.006
(A4SHZ5) RecName: Full=30S ribosomal protein S9; &CP000644_300(... 44 0.006
(Q7NRT4) RecName: Full=30S ribosomal protein S9; &AE016825_3696... 44 0.006
(A4JBK5) RecName: Full=30S ribosomal protein S9; &CP000614_630(... 44 0.006
(Q2K9W4) RecName: Full=30S ribosomal protein S9; &CP000133_1550... 44 0.006
(Q15PI4) RecName: Full=30S ribosomal protein S9; &CP000388_3671... 44 0.006
AY657385_1(AY657385|pid:none) Synthetic construct Peudomonas aer... 44 0.006
AM946015_271(AM946015|pid:none) Streptococcus uberis 0140J compl... 44 0.006
(A1KWD5) RecName: Full=30S ribosomal protein S9; &(A9M088) RecN... 44 0.006
(A6TWE6) RecName: Full=30S ribosomal protein S9; &CP000724_4271... 44 0.008
(A4YVP2) RecName: Full=30S ribosomal protein S9; &CU234118_3995... 44 0.008
(Q04MF5) RecName: Full=30S ribosomal protein S9; &(Q8CWU4) RecN... 44 0.008
(Q97SN4) RecName: Full=30S ribosomal protein S9; &AE005672_283(... 44 0.008
(B1J1W9) RecName: Full=30S ribosomal protein S9; &CP000949_922(... 44 0.008
CP001601_454(CP001601|pid:none) Corynebacterium aurimucosum ATCC... 44 0.008
(A3CQF1) RecName: Full=30S ribosomal protein S9; &CP000387_1936... 44 0.008
CP001124_901(CP001124|pid:none) Geobacter bemidjiensis Bem, comp... 44 0.008
CP000301_2667(CP000301|pid:none) Rhodopseudomonas palustris BisB... 44 0.008
(Q7NBH4) RecName: Full=30S ribosomal protein S9; &AE015450_294(... 44 0.008
(Q6BIJ5) RecName: Full=40S ribosomal protein S9, mitochondrial; ... 44 0.008
(A8Z324) RecName: Full=30S ribosomal protein S9; &(Q2FES2) RecN... 44 0.008
(A9VPB1) RecName: Full=30S ribosomal protein S9; &CP000903_139(... 44 0.008
(Q89KE5) RecName: Full=30S ribosomal protein S9; &BA000040_4962... 44 0.008
(A5IV01) RecName: Full=30S ribosomal protein S9; &(A6QJ59) RecN... 44 0.008
CR378673_173(CR378673|pid:none) Photobacterium profundum SS9; se... 44 0.008
CP001503_553(CP001503|pid:none) Burkholderia glumae BGR1 chromos... 44 0.011
CP001129_1685(CP001129|pid:none) Streptococcus equi subsp. zooep... 44 0.011
(A1UC03) RecName: Full=30S ribosomal protein S9; &(A3PVN4) RecN... 44 0.011
(B7UZL0) RecName: Full=30S ribosomal protein S9; &(Q02H08) RecN... 44 0.011
(Q6YR77) RecName: Full=30S ribosomal protein S9; &AP006628_139(... 44 0.011
CP000628_1354(CP000628|pid:none) Agrobacterium radiobacter K84 c... 44 0.011
CR954246_2465(CR954246|pid:none) Pseudoalteromonas haloplanktis ... 44 0.011
CP001620_1672(CP001620|pid:none) Corynebacterium kroppenstedtii ... 44 0.011
(A8M4B9) RecName: Full=30S ribosomal protein S9; &CP000850_4098... 43 0.014
(A4XQQ4) RecName: Full=30S ribosomal protein S9; &CP000680_895(... 43 0.014
CP001488_758(CP001488|pid:none) Brucella melitensis ATCC 23457 c... 43 0.014
FM204884_225(FM204884|pid:none) Streptococcus equi subsp. zooepi... 43 0.014
(Q2YND9) RecName: Full=30S ribosomal protein S9; &(Q57DW2) RecN... 43 0.014
(Q9CNB1) RecName: Full=30S ribosomal protein S9; &AE004439_521(... 43 0.014
CP001098_150(CP001098|pid:none) Halothermothrix orenii H 168, co... 43 0.014
(Q63QW4) RecName: Full=30S ribosomal protein S9; &BX571965_2937... 43 0.014
(Q8DW97) RecName: Full=30S ribosomal protein S9; &AE014133_153(... 43 0.014
(Q8YGJ0) RecName: Full=30S ribosomal protein S9; &AC3398(AC3398... 43 0.014
FJ222968_1(FJ222968|pid:none) Xylella fastidiosa strain RO 2 30S... 43 0.019
FJ222976_1(FJ222976|pid:none) Xylella fastidiosa strain BB2 30S ... 43 0.019
AM181176_820(AM181176|pid:none) Pseudomonas fluorescens SBW25 co... 43 0.019
(Q3SSQ8) RecName: Full=30S ribosomal protein S9; &CP000115_1415... 43 0.019
FJ222977_1(FJ222977|pid:none) Xylella fastidiosa strain BB3 30S ... 43 0.019
(Q136Q2) RecName: Full=30S ribosomal protein S9; &CP000283_2697... 43 0.019
FJ222963_1(FJ222963|pid:none) Xylella fastidiosa strain G West 3... 43 0.019
(Q5Z1H9) RecName: Full=30S ribosomal protein S9; &AP006618_874(... 43 0.019
FJ222972_1(FJ222972|pid:none) Xylella fastidiosa strain RO 6 30S... 43 0.019
(A4W3W8) RecName: Full=30S ribosomal protein S9; &CP000408_1897... 43 0.019
CP000820_5892(CP000820|pid:none) Frankia sp. EAN1pec, complete g... 43 0.019
FJ222960_1(FJ222960|pid:none) Xylella fastidiosa strain Alf 34 3... 43 0.019
FJ222970_1(FJ222970|pid:none) Xylella fastidiosa strain RO 4 30S... 43 0.019
AP008971_1478(AP008971|pid:none) Finegoldia magna ATCC 29328 DNA... 43 0.019
CR543861_2717(CR543861|pid:none) Acinetobacter sp. ADP1 complete... 43 0.019
(Q4K6H3) RecName: Full=30S ribosomal protein S9; &CP000076_5009... 43 0.019
FJ222961_1(FJ222961|pid:none) Xylella fastidiosa strain AlfSNI 3... 43 0.019
CP001616_2880(CP001616|pid:none) Tolumonas auensis DSM 9187, com... 43 0.019
(Q1QKK3) RecName: Full=30S ribosomal protein S9; &CP000319_2342... 43 0.019
CP000854_1092(CP000854|pid:none) Mycobacterium marinum M, comple... 43 0.019
CP001634_337(CP001634|pid:none) Kosmotoga olearia TBF 19.5.1, co... 42 0.025
(Q38UV5) RecName: Full=30S ribosomal protein S9; &CR936503_1723... 42 0.025
(A2RP61) RecName: Full=30S ribosomal protein S9; &(Q02VM1) RecN... 42 0.025
(Q7VLF7) RecName: Full=30S ribosomal protein S9; &AE017143_1267... 42 0.025
(Q2IWN6) RecName: Full=30S ribosomal protein S9; &CP000250_2662... 42 0.025
(Q8EWW8) RecName: Full=30S ribosomal protein S9; &BA000026_82(B... 42 0.025
AP007255_3556(AP007255|pid:none) Magnetospirillum magneticum AMB... 42 0.025
(B0C426) RecName: Full=30S ribosomal protein S9; &CP000828_1195... 42 0.025
(P21470) RecName: Full=30S ribosomal protein S9; AltName: Full=B... 42 0.025
CP000930_1366(CP000930|pid:none) Heliobacterium modesticaldum Ic... 42 0.025
(A1KPC9) RecName: Full=30S ribosomal protein S9; &(A5U8B8) RecN... 42 0.025
CP000817_4380(CP000817|pid:none) Lysinibacillus sphaericus C3-41... 42 0.025
(Q47VT2) RecName: Full=30S ribosomal protein S9; &CP000083_4308... 42 0.032
BC123369_1(BC123369|pid:none) Xenopus laevis mitochondrial ribos... 42 0.032
CT030148_76(CT030148|pid:none) Kuenenia stuttgartiensis genome f... 42 0.032
BC158704_1(BC158704|pid:none) Rattus norvegicus mitochondrial ri... 42 0.032
(B0KFU7) RecName: Full=30S ribosomal protein S9; &(Q1I597) RecN... 42 0.032
(Q65T21) RecName: Full=30S ribosomal protein S9; &AE016827_1282... 42 0.032
BC088242_1(BC088242|pid:none) Rattus norvegicus mitochondrial ri... 42 0.032
(A2RGF8) RecName: Full=30S ribosomal protein S9; &(B5XIJ1) RecN... 42 0.032
(A1VJJ4) RecName: Full=30S ribosomal protein S9; &CP000529_495(... 42 0.032
(B0UTU5) RecName: Full=30S ribosomal protein S9; &(P31782) RecN... 42 0.042
(A7Z0S2) RecName: Full=30S ribosomal protein S9; &CP000560_150(... 42 0.042
B43310(B43310)ribosomal protein S9 - Haemophilus somnus 42 0.042
CT573213_1081(CT573213|pid:none) Frankia alni str. ACN14A chromo... 42 0.042
EF508371_131(EF508371|pid:none) Rhodomonas salina strain CCMP131... 42 0.042
(A1V052) RecName: Full=30S ribosomal protein S9; &(A2S582) RecN... 42 0.042
CP001606_360(CP001606|pid:none) Bifidobacterium animalis subsp. ... 42 0.042
(A6VXZ2) RecName: Full=30S ribosomal protein S9; &CP000749_2378... 42 0.042
(Q5HM32) RecName: Full=30S ribosomal protein S9; &(Q8CRJ0) RecN... 41 0.055
(A5UC54) RecName: Full=30S ribosomal protein S9; &(A5UEV9) RecN... 41 0.055
AP008957_1905(AP008957|pid:none) Rhodococcus erythropolis PR4 DN... 41 0.055
CP000521_3300(CP000521|pid:none) Acinetobacter baumannii ATCC 17... 41 0.055
(A0QKT2) RecName: Full=30S ribosomal protein S9; &CP000479_4217... 41 0.055
(Q83GU6) RecName: Full=30S ribosomal protein S9; &(Q83IA3) RecN... 41 0.055
(Q3K3F8) RecName: Full=30S ribosomal protein S9; &(Q8E1Y6) RecN... 41 0.055
CP000687_559(CP000687|pid:none) Actinobacillus pleuropneumoniae ... 41 0.055
(A5W8S0) RecName: Full=30S ribosomal protein S9; &(Q88N96) RecN... 41 0.055
BX248355_178(BX248355|pid:none) Corynebacterium diphtheriae grav... 41 0.072
CP000237_804(CP000237|pid:none) Neorickettsia sennetsu strain Mi... 41 0.072
(Q9D7N3) RecName: Full=28S ribosomal protein S9, mitochondrial; ... 41 0.072
(Q3Z949) RecName: Full=30S ribosomal protein S9; &CP000027_495(... 41 0.072
CP001130_1000(CP001130|pid:none) Hydrogenobaculum sp. Y04AAS1, c... 41 0.072
AP009385_526(AP009385|pid:none) Burkholderia multivorans ATCC 17... 41 0.072
BC051936_1(BC051936|pid:none) Mus musculus mitochondrial ribosom... 41 0.072
BC069980_1(BC069980|pid:none) Mus musculus mitochondrial ribosom... 41 0.072
(P47656) RecName: Full=30S ribosomal protein S9; &A64246(A64246... 41 0.072
CP000815_536(CP000815|pid:none) Paulinella chromatophora chromat... 40 0.094
CP001275_912(CP001275|pid:none) Thermomicrobium roseum DSM 5159,... 40 0.12
CP000909_2351(CP000909|pid:none) Chloroflexus aurantiacus J-10-f... 40 0.12
(Q87SI4) RecName: Full=30S ribosomal protein S9; &BA000031_439(... 40 0.12
(Q3ZZP2) RecName: Full=30S ribosomal protein S9; &AJ965256_392(... 40 0.16
(Q58DQ5) RecName: Full=28S ribosomal protein S9, mitochondrial; ... 40 0.16
(Q982W9) RecName: Full=30S ribosomal protein S9; &BA000012_6656... 40 0.16
(Q7UZW9) RecName: Full=30S ribosomal protein S9; &BX548174_1773... 40 0.16
(Q3MF93) RecName: Full=30S ribosomal protein S9; &(Q8YPK7) RecN... 39 0.21
(Q9MUV1) RecName: Full=30S ribosomal protein S9, chloroplastic; ... 39 0.21
(Q82Z47) RecName: Full=30S ribosomal protein S9; &AE016830_3014... 39 0.21
(A1WL75) RecName: Full=30S ribosomal protein S9; &CP000542_2589... 39 0.21
(Q24ZM5) RecName: Full=30S ribosomal protein S9; &AP008230_728(... 39 0.21
(Q6FL25) RecName: Full=40S ribosomal protein S9, mitochondrial; ... 39 0.21
(A3MZW7) RecName: Full=30S ribosomal protein S9; &CP000569_595(... 39 0.21
(Q2JUJ9) RecName: Full=30S ribosomal protein S9; &CP000239_1371... 39 0.27
(P40828) RecName: Full=30S ribosomal protein S9; &AL583918_102(... 39 0.27
U01744_2(U01744|pid:none) Mycoplasma genitalium random genomic c... 39 0.27
CP001114_793(CP001114|pid:none) Deinococcus deserti VCD115, comp... 39 0.36
(Q8ETV3) RecName: Full=30S ribosomal protein S9; &BA000028_152(... 39 0.36
AE017245_77(AE017245|pid:none) Mycoplasma synoviae 53, complete ... 39 0.36
(Q8Y459) RecName: Full=30S ribosomal protein S9; &AD1399(AD1399... 39 0.36
CP001344_1104(CP001344|pid:none) Cyanothece sp. PCC 7425, comple... 38 0.46
FM992688_1139(FM992688|pid:none) Candida dubliniensis CD36 chrom... 38 0.46
(B1AJL7) RecName: Full=30S ribosomal protein S9; &(Q9PPR3) RecN... 38 0.46
CU459003_1235(CU459003|pid:none) Magnetospirillum gryphiswaldens... 38 0.46
(O94150) RecName: Full=40S ribosomal protein S9, mitochondrial; ... 38 0.61
CT978603_2143(CT978603|pid:none) Synechococcus sp. RCC307 genomi... 37 0.79
(B5ZC90) RecName: Full=30S ribosomal protein S9; &CP001184_617(... 37 0.79
(Q0ID32) RecName: Full=30S ribosomal protein S9; &CP000435_401(... 37 0.79
(Q6KI60) RecName: Full=30S ribosomal protein S9; &AE017308_230(... 37 0.79
(Q5E2N0) RecName: Full=30S ribosomal protein S9; &CP000020_2245... 37 1.0
(Q7V520) RecName: Full=30S ribosomal protein S9; &BX548175_2286... 37 1.0
AP009608_225(AP009608|pid:none) Mycoplasma fermentans PG18 DNA, ... 37 1.0
(A2BTB1) RecName: Full=30S ribosomal protein S9; &CP000551_1735... 37 1.0
(A2CC55) RecName: Full=30S ribosomal protein S9; &CP000554_2309... 37 1.4
(A3PF21) RecName: Full=30S ribosomal protein S9; &CP000576_1724... 37 1.4
(Q9TLV4) RecName: Full=30S ribosomal protein S9, chloroplastic; ... 37 1.4
(P38120) RecName: Full=37S ribosomal protein S9, mitochondrial; ... 36 2.3
FM954972_381(FM954972|pid:none) Vibrio splendidus LGP32 chromoso... 36 2.3
CP000235_1016(CP000235|pid:none) Anaplasma phagocytophilum HZ, c... 36 2.3
CP000095_1930(CP000095|pid:none) Prochlorococcus marinus str. NA... 35 3.9
(A8G735) RecName: Full=30S ribosomal protein S9; &CP000825_1798... 35 3.9
AP008231_1892(AP008231|pid:none) Synechococcus elongatus PCC 630... 35 3.9
AP009179_733(AP009179|pid:none) Sulfurovum sp. NBC37-1 genomic D... 35 3.9
(B6ELJ4) RecName: Full=30S ribosomal protein S9; &FM178379_2662... 35 5.1

>(A2ZB00) RecName: Full=40S ribosomal protein S16; &(Q0IQF7)
RecName: Fu &AK058697_1(AK058697|pid:none)
&AK059550_1(AK059550|pid:none)
&AK121503_1(AK121503|pid:none)
&AP008217_123(AP008217|pid:none)
&AP008218_130(AP008218|pid:none)
Length = 149

Score = 187 bits (475), Expect = 5e-46
Identities = 88/127 (69%), Positives = 107/127 (84%)
Frame = +3

Query: 462 VAVAYATNGKGLIKVNGVPLEFIQPKNLKLKVYEPVLIVGKDVFSQVDIRVRVRGGGSVA 641
VAV+Y G+GLIKVNGVP+E I+P+ L+LK +EP+L+ G+ F +D+R+RVRGGG +
Sbjct: 23 VAVSYCKPGRGLIKVNGVPIELIRPEMLRLKAFEPILLAGRSRFKDIDMRIRVRGGGKTS 82

Query: 642 QIYAIRQAIAKSIVAYHQKYVDEESKNEIKKKILDYDRSLLVADPRRCEPKKFGGRGARA 821
QIYAIRQAIAK++VAY+QKYVDE SK E+K YDR+LLVADPRRCEPKKFGGRGARA
Sbjct: 83 QIYAIRQAIAKALVAYYQKYVDEASKKEVKDIFARYDRTLLVADPRRCEPKKFGGRGARA 142

Query: 822 RFQKSYR 842
RFQKSYR
Sbjct: 143 RFQKSYR 149

Score = 181 bits (459), Expect = 3e-44
Identities = 84/119 (70%), Positives = 102/119 (85%)
Frame = -2

Query: 461 GKGLIKVNGVPLEFIQPKXLKLKVYEPVLIVGKDVFSQVDIRVRVRGGGSVAQIYAIRQA 282
G+GLIKVNGVP+E I+P+ L+LK +EP+L+ G+ F +D+R+RVRGGG +QIYAIRQA
Sbjct: 31 GRGLIKVNGVPIELIRPEMLRLKAFEPILLAGRSRFKDIDMRIRVRGGGKTSQIYAIRQA 90

Query: 281 IAKSIVAYHQKYVDEESKNEIKKKILDYDRSLLVADPRRCEPKKFGGRGARARFQKSYR 105
IAK++VAY+QKYVDE SK E+K YDR+LLVADPRRCEPKKFGGRGARARFQKSYR
Sbjct: 91 IAKALVAYYQKYVDEASKKEVKDIFARYDRTLLVADPRRCEPKKFGGRGARARFQKSYR 149

Lambda K H
0.318 0.134 0.401

Gapped
Lambda K H
0.267 0.0410 0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3236559
Number of Hits to DB: 1,323,706,935
Number of extensions: 24128649
Number of successful extensions: 65237
Number of sequences better than 10.0: 507
Number of HSP's gapped: 64837
Number of HSP's successfully gapped: 1006
Length of query: 327
Length of database: 1,051,180,864
Length adjustment: 129
Effective length of query: 198
Effective length of database: 633,664,753
Effective search space: 125465621094
Effective search space used: 125465621094
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)

PSORT

psg: 0.90 gvh: 0.40 alm: 0.44 top: 0.53 tms: 0.00 mit: 0.21 mip: 0.00
nuc: 0.00 erl: 0.00 erm: 0.20 pox: 0.00 px2: 0.00 vac: 0.00 rnp: 0.00
act: 0.00 caa: 0.00 yqr: 0.00 tyr: 0.00 leu: 0.00 gpi: 0.00 myr: 0.00
dna: 0.00 rib: 0.00 bac: 0.00 m1a: 0.00 m1b: 0.00 m2 : 0.00 mNt: 0.00
m3a: 0.00 m3b: 0.00 m_ : 1.00

44.0 %: nuclear
32.0 %: cytoplasmic
16.0 %: cytoskeletal
4.0 %: mitochondrial
4.0 %: peroxisomal

>> prediction for Contig-U15113-1 is nuc

VS (DIR, S) 25
VH (FL, L) 6
VF (FL, S) 1
AH (FL, L) 0
AF (FL, S) 0
SL (DIR, L) 1
SS (DIR, S) 1
SH (FL, L) 0
SF (FL, S) 0
CH (FL, L) 0
CF (FL, S) 0
FCL (DIR, L) 0
FC (DIR, S) 1
FC-IC (SUB) 0