>Contig-U02918-1 (Contig-U02918-1Q) /CSM_Contig/Contig-U02918-1Q.Seq.d
ATTTAAAATTTTTTAATTAATTGGGTGTTTTAAATTATTTCAGTTATTGT
TTTTTTTTTTCTTTTTATATCTTTTATTAATACTATTATTATTCTTTTAT
TATAAACACTTTTTTTTTTTTTTTTNAAAATTTTTTNNTTTTAAAAAAAA
ATTTTTTTAAANTNAAAAA

est1=AFK521F,1,170
est2=SFK337F,19,170

fkif*LIGCFKLFQLLFFFFFLYLLLILLLFFYYKHFFFFFXKFFXFKKKFF*xxk

Frame A:
i*nflinwvf*iisvivffflfisfintiiilll*tlffffxkifxf*kkiflxxk


Frame B:
fkif*LIGCFKLFQLLFFFFFLYLLLILLLFFYYKHFFFFFXKFFXFKKKFF*xxk


Frame C:
lkffn*lgvlnyfsycfffsfyify*yyyysfiintfffffxnfxxlkknffkxk

Query= Contig-U02918-1 (Contig-U02918-1Q)
/CSM_Contig/Contig-U02918-1Q.Seq.d
         (169 letters)

Database: CSM
           6905 sequences; 5,674,871 total letters


                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

Contig-U02918-1 (Contig-U02918-1Q) /CSM_Contig/Conti...    98  4e-21
Contig-U12673-1 (Contig-U12673-1Q) /CSM_Contig/Conti...    42  2e-04
Contig-U11835-1 (Contig-U11835-1Q) /CSM_Contig/Conti...    42  2e-04
Contig-U14190-1 (Contig-U14190-1Q) /CSM_Contig/Conti...    40  7e-04
Contig-U12206-1 (Contig-U12206-1Q) /CSM_Contig/Conti...    40  7e-04
Contig-U06723-1 (Contig-U06723-1Q) /CSM_Contig/Conti...    40  7e-04
Contig-U14441-1 (Contig-U14441-1Q) /CSM_Contig/Conti...    38  0.003
Contig-U13028-1 (Contig-U13028-1Q) /CSM_Contig/Conti...    38  0.003
Contig-U12695-1 (Contig-U12695-1Q) /CSM_Contig/Conti...    38  0.003
Contig-U11794-1 (Contig-U11794-1Q) /CSM_Contig/Conti...    38  0.003

>Contig-U02918-1 (Contig-U02918-1Q) /CSM_Contig/Contig-U02918-1Q.Seq.d
          Length = 169

 Score = 97.6 bits (49), Expect = 4e-21
 Identities = 49/49 (100%)
 Strand = Plus / Plus

                                                           
Query: 1  atttaaaattttttaattaattgggtgttttaaattatttcagttattg 49
          |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1  atttaaaattttttaattaattgggtgttttaaattatttcagttattg 49


 Score = 85.7 bits (43), Expect = 1e-17
 Identities = 43/43 (100%)
 Strand = Plus / Plus

                                                      
Query: 67  atatcttttattaatactattattattcttttattataaacac 109
           |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 67  atatcttttattaatactattattattcttttattataaacac 109


>Contig-U12673-1 (Contig-U12673-1Q) /CSM_Contig/Contig-U12673-1Q.Seq.d
          Length = 2561

 Score = 42.1 bits (21), Expect = 2e-04
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 69  atcttttattaatactattattatt 93
           |||||||||||| ||||||||||||
Sbjct: 239 atcttttattaaaactattattatt 215


 Score = 28.2 bits (14), Expect = 2.7
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                          
Query: 2    tttaaaatttttta 15
            ||||||||||||||
Sbjct: 2486 tttaaaatttttta 2473


>Contig-U11835-1 (Contig-U11835-1Q) /CSM_Contig/Contig-U11835-1Q.Seq.d
          Length = 1648

 Score = 42.1 bits (21), Expect = 2e-04
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 74   ttattaatactattattattctttt 98
            ||||||||||||||||| |||||||
Sbjct: 1249 ttattaatactattatttttctttt 1225


  Database: CSM
    Posted date:  Jun 9, 2004  7:35 PM
  Number of letters in database: 5,674,871
  Number of sequences in database:  6905
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5500
Number of Sequences: 6905
Number of extensions: 5500
Number of successful extensions: 2501
Number of sequences better than 10.0: 471
length of query: 169
length of database: 5,674,871
effective HSP length: 15
effective length of query: 154
effective length of database: 5,571,296
effective search space: 857979584
effective search space used: 857979584
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 14 (28.2 bits)

Query= Contig-U02918-1 (Contig-U02918-1Q) /CSM_Contig/Contig-U02918-1Q.Seq.d
         (169 letters)

Database: ddbjhum1.seq; ddbjhum10.seq; ddbjhum11.seq; ddbjhum12.seq;
ddbjhum13.seq; ddbjhum14.seq; ddbjhum15.seq; ddbjhum16.seq;
ddbjhum17.seq; ddbjhum18.seq; ddbjhum19.seq; ddbjhum2.seq;
ddbjhum20.seq; ddbjhum21.seq; ddbjhum22.seq; ddbjhum3.seq;
ddbjhum4.seq; ddbjhum5.seq; ddbjhum6.seq; ddbjhum7.seq; ddbjhum8.seq;
ddbjhum9.seq; /db/DDBJNEW.DATA/b/new_ddbjhum.seq; ddbjpri.seq;
/db/DDBJNEW.DATA/b/new_ddbjpri.seq; ddbjrod1.seq; ddbjrod10.seq;
ddbjrod11.seq; ddbjrod12.seq; ddbjrod13.seq; ddbjrod2.seq;
ddbjrod3.seq; ddbjrod4.seq; ddbjrod5.seq; ddbjrod6.seq; ddbjrod7.seq;
ddbjrod8.seq; ddbjrod9.seq; /db/DDBJNEW.DATA/b/new_ddbjrod.seq;
ddbjmam.seq; /db/DDBJNEW.DATA/b/new_ddbjmam.seq; ddbjvrt1.seq;
ddbjvrt2.seq; ddbjvrt3.seq; ddbjvrt4.seq; ddbjvrt5.seq; ddbjvrt6.seq;
/db/DDBJNEW.DATA/b/new_ddbjvrt.seq; ddbjinv1.seq; ddbjinv2.seq;
ddbjinv3.seq; ddbjinv4.seq; ddbjinv5.seq; ddbjinv6.seq;
/db/DDBJNEW.DATA/b/new_ddbjinv.seq; ddbjpln1.seq; ddbjpln10.seq;
ddbjpln11.seq; ddbjpln2.seq; ddbjpln3.seq; ddbjpln4.seq; ddbjpln5.seq;
ddbjpln6.seq; ddbjpln7.seq; ddbjpln8.seq; ddbjpln9.seq;
/db/DDBJNEW.DATA/b/new_ddbjpln.seq; ddbjbct1.seq; ddbjbct2.seq;
ddbjbct3.seq; ddbjbct4.seq; ddbjbct5.seq; ddbjbct6.seq; ddbjbct7.seq;
ddbjbct8.seq; ddbjbct9.seq; /db/DDBJNEW.DATA/b/new_ddbjbct.seq;
ddbjvrl1.seq; ddbjvrl2.seq; ddbjvrl3.seq; ddbjvrl4.seq;
/db/DDBJNEW.DATA/b/new_ddbjvrl.seq; ddbjphg.seq;
/db/DDBJNEW.DATA/b/new_ddbjphg.seq; ddbjuna.seq;
/db/DDBJNEW.DATA/b/new_ddbjuna.seq; ddbjgss1.seq; ddbjgss10.seq;
ddbjgss100.seq; ddbjgss101.seq; ddbjgss102.seq; ddbjgss103.seq;
ddbjgss104.seq; ddbjgss11.seq; ddbjgss12.seq; ddbjgss13.seq;
ddbjgss14.seq; ddbjgss15.seq; ddbjgss16.seq; ddbjgss17.seq;
ddbjgss18.seq; ddbjgss19.seq; ddbjgss2.seq; ddbjgss20.seq;
ddbjgss21.seq; ddbjgss22.seq; ddbjgss23.seq; ddbjgss24.seq;
ddbjgss25.seq; ddbjgss26.seq; ddbjgss27.seq; ddbjgss28.seq;
ddbjgss29.seq; ddbjgss3.seq; ddbjgss30.seq; ddbjgss31.seq;
ddbjgss32.seq; ddbjgss33.seq; ddbjgss34.seq; ddbjgss35.seq;
ddbjgss36.seq; ddbjgss37.seq; ddbjgss38.seq; ddbjgss39.seq;
ddbjgss40.seq; ddbjgss41.seq; ddbjgss42.seq; ddbjgss43.seq;
ddbjgss44.seq; ddbjgss45.seq; ddbjgss46.seq; ddbjgss47.seq;
ddbjgss48.seq; ddbjgss49.seq; ddbjgss50.seq; ddbjgss51.seq;
ddbjgss52.seq; ddbjgss53.seq; ddbjgss54.seq; ddbjgss55.seq;
ddbjgss56.seq; ddbjgss57.seq; ddbjgss58.seq; ddbjgss59.seq;
ddbjgss60.seq; ddbjgss61.seq; ddbjgss62.seq; ddbjgss63.seq;
ddbjgss64.seq; ddbjgss65.seq; ddbjgss66.seq; ddbjgss67.seq;
ddbjgss68.seq; ddbjgss69.seq; ddbjgss7.seq; ddbjgss70.seq;
ddbjgss71.seq; ddbjgss72.seq; ddbjgss73.seq; ddbjgss74.seq;
ddbjgss75.seq; ddbjgss76.seq; ddbjgss77.seq; ddbjgss78.seq;
ddbjgss79.seq; ddbjgss8.seq; ddbjgss80.seq; ddbjgss81.seq;
ddbjgss82.seq; ddbjgss83.seq; ddbjgss84.seq; ddbjgss85.seq;
ddbjgss86.seq; ddbjgss87.seq; ddbjgss88.seq; ddbjgss89.seq;
ddbjgss9.seq; ddbjgss90.seq; ddbjgss91.seq; ddbjgss92.seq;
ddbjgss93.seq; ddbjgss94.seq; ddbjgss95.seq; ddbjgss96.seq;
ddbjgss97.seq; ddbjgss98.seq; ddbjgss99.seq;
/db/DDBJNEW.DATA/b/new_ddbjgss1.seq;
/db/DDBJNEW.DATA/b/new_ddbjgss2.seq;
/db/DDBJNEW.DATA/b/new_ddbjgss3.seq; ddbjhtg1.seq; ddbjhtg10.seq;
ddbjhtg11.seq; ddbjhtg12.seq; ddbjhtg13.seq; ddbjhtg14.seq;
ddbjhtg15.seq; ddbjhtg16.seq; ddbjhtg17.seq; ddbjhtg18.seq;
ddbjhtg19.seq; ddbjhtg2.seq; ddbjhtg20.seq; ddbjhtg21.seq;
ddbjhtg22.seq; ddbjhtg23.seq; ddbjhtg24.seq; ddbjhtg25.seq;
ddbjhtg26.seq; ddbjhtg27.seq; ddbjhtg28.seq; ddbjhtg29.seq;
ddbjhtg3.seq; ddbjhtg30.seq; ddbjhtg31.seq; ddbjhtg32.seq;
ddbjhtg33.seq; ddbjhtg34.seq; ddbjhtg35.seq; ddbjhtg36.seq;
ddbjhtg37.seq; ddbjhtg38.seq; ddbjhtg39.seq; ddbjhtg4.seq;
ddbjhtg40.seq; ddbjhtg41.seq; ddbjhtg42.seq; ddbjhtg43.seq;
ddbjhtg44.seq; ddbjhtg45.seq; ddbjhtg46.seq; ddbjhtg47.seq;
ddbjhtg48.seq; ddbjhtg49.seq; ddbjhtg5.seq; ddbjhtg50.seq;
ddbjhtg51.seq; ddbjhtg6.seq; ddbjhtg7.seq; ddbjhtg8.seq; ddbjhtg9.seq;
/db/DDBJNEW.DATA/b/new_ddbjhtg1.seq;
/db/DDBJNEW.DATA/b/new_ddbjhtg2.seq; ddbjpat1.seq; ddbjpat10.seq;
ddbjpat11.seq; ddbjpat12.seq; ddbjpat13.seq; ddbjpat14.seq;
ddbjpat15.seq; ddbjpat16.seq; ddbjpat2.seq; ddbjpat3.seq;
ddbjpat4.seq; ddbjpat5.seq; ddbjpat6.seq; ddbjpat7.seq; ddbjpat8.seq;
ddbjpat9.seq; /db/DDBJNEW.DATA/b/new_ddbjpat.seq; ddbjsts1.seq;
ddbjsts2.seq; ddbjsts3.seq; ddbjsts4.seq;
/db/DDBJNEW.DATA/b/new_ddbjsts.seq; ddbjsyn.seq;
/db/DDBJNEW.DATA/b/new_ddbjsyn.seq; est_atha1.seq;
/db/DDBJNEW.DATA/b/new_est_atha1.seq; est_cele1.seq; est_drer1.seq;
/db/DDBJNEW.DATA/b/new_est_drer1.seq; est_dmel1.seq;
/db/DDBJNEW.DATA/b/new_est_dmel1.seq; est_gmax1.seq;
/db/DDBJNEW.DATA/b/new_est_gmax1.seq; est_hum1.seq; est_hum2.seq;
est_hum3.seq; est_hum4.seq; /db/DDBJNEW.DATA/b/new_est_hum1.seq;
est_lesc1.seq; /db/DDBJNEW.DATA/b/new_est_lesc1.seq; est_mous1.seq;
est_mous2.seq; est_mous3.seq; /db/DDBJNEW.DATA/b/new_est_mous1.seq;
est_osat1.seq; /db/DDBJNEW.DATA/b/new_est_osat1.seq; est_rnor1.seq;
/db/DDBJNEW.DATA/b/new_est_rnor1.seq; est_xlae1.seq;
/db/DDBJNEW.DATA/b/new_est_xlae1.seq; est_zmay1.seq;
/db/DDBJNEW.DATA/b/new_est_zmay1.seq; est_rest1.seq; est_rest2.seq;
est_rest3.seq; est_rest4.seq; est_rest5.seq;
/db/DDBJNEW.DATA/b/new_est_rest1.seq;
/db/DDBJNEW.DATA/b/new_est_rest2.seq
           39,953,378 sequences; ],318,265,086 total letters

Searching...................................................done

                                                             Score    E
Sequences producing significant alignments:                  (bits) Value  N

AE014830|AE014830.1 Plasmodium falciparum 3D7 chromosome 10 ...    34   1e-06  9
AC114263|AC114263.2 Dictyostelium discoideum chromosome 2 ma...    40   7e-06  9
AC116987|AC116987.2 Dictyostelium discoideum chromosome 2 ma...    36   1e-05  7
AE014827|AE014827.1 Plasmodium falciparum 3D7 chromosome 14 ...    34   3e-05  11
AC115682|AC115682.2 Dictyostelium discoideum chromosome 2 ma...    44   6e-05  7
AC117076|AC117076.3 Dictyostelium discoideum chromosome 2 ma...    36   6e-05  10
AC117080|AC117080.2 Dictyostelium discoideum chromosome 2 ma...    40   1e-04  9
BX510366|BX510366.5 Zebrafish DNA sequence from clone DKEY-1...    36   1e-04  7
AC115612|AC115612.2 Dictyostelium discoideum chromosome 2 ma...    36   2e-04  8
AL929352|AL929352.1 Plasmodium falciparum strain 3D7, chromo...    42   2e-04  11
AL049185|AL049185.4 Plasmodium falciparum DNA *** SEQUENCING...    40   2e-04  11
AX345303|AX345303.1 Sequence 374 from Patent WO0200928.            46   2e-04  3
AC117075|AC117075.2 Dictyostelium discoideum chromosome 2 ma...    34   2e-04  11
AE014824|AE014824.1 Plasmodium falciparum 3D7 chromosome 14 ...    32   3e-04  12
AC115680|AC115680.3 Dictyostelium discoideum chromosome 2 ma...    42   4e-04  9
AC115607|AC115607.2 Dictyostelium discoideum chromosome 2 ma...    40   6e-04  6
AF063866|AF063866.1 Melanoplus sanguinipes entomopoxvirus, c...    30   6e-04  12
AC131941|AC131941.1 Mus musculus BAC clone RP23-109A19 from ...    54   7e-04  1
AC153504|AC153504.1 Mus musculus clone RP23-324E2, WORKING D...    54   7e-04  1
AC101794|AC101794.5 Mus musculus chromosome 1, clone RP24-18...    54   7e-04  1
AY521251|AY521251.1 Aleurodicus dugesii mitochondrion, compl...    32   0.001  7
CR749164|CR749164.1 Zebrafish DNA sequence *** SEQUENCING IN...    40   0.001  8
CR382400|CR382400.1 Plasmodium falciparum chromosome 6, comp...    36   0.001  13
AC116960|AC116960.2 Dictyostelium discoideum chromosome 2 ma...    32   0.001  10
AC116551|AC116551.2 Dictyostelium discoideum chromosome 2 ma...    36   0.001  9
AC117176|AC117176.2 Dictyostelium discoideum chromosome 2 ma...    36   0.001  11
AE014848|AE014848.1 Plasmodium falciparum 3D7 chromosome 12,...    32   0.002  13
AL929351|AL929351.1 Plasmodium falciparum strain 3D7, chromo...    30   0.002  12
AC115599|AC115599.2 Dictyostelium discoideum chromosome 2 ma...    34   0.002  11
AC116986|AC116986.2 Dictyostelium discoideum chromosome 2 ma...    40   0.002  10
AC116330|AC116330.2 Dictyostelium discoideum chromosome 2 ma...    42   0.002  10
CR382399|CR382399.1 Plasmodium falciparum chromosome 6, comp...    32   0.002  11
AL008970|AL008970.3 Plasmodium falciparum MAL3P4.                  32   0.002  10
AC149269|AC149269.11 Medicago truncatula clone mth2-102b19, ...    36   0.003  6
AC004157|AC004157.8 Plasmodium falciparum chromosome 12 clon...    34   0.003  8
Z11874|Z11874.1 Euglena gracilis Z chloroplast DNA.                32   0.003  8
AC004153|AC004153.7 Plasmodium falciparum chromosome 12 clon...    30   0.003  11
AL035477|AL035477.6 Plasmodium falciparum MAL4P4.                  36   0.003  11
AJ133819|AJ133819.1 Entodinium caudatum mRNA for 14-3-3 prot...    34   0.004  3
AC138755|AC138755.1 Homo sapiens chromosome 17 clone RP11-14...    38   0.004  4
AC116956|AC116956.2 Dictyostelium discoideum chromosome 2 ma...    38   0.004  12
AF250284|AF250284.1 Amsacta moorei entomopoxvirus, complete ...    30   0.005  12
AL929355|AL929355.1 Plasmodium falciparum strain 3D7, chromo...    40   0.005  11
AC116957|AC116957.2 Dictyostelium discoideum chromosome 2 ma...    42   0.005  13
AC117072|AC117072.3 Dictyostelium discoideum chromosome 2 ma...    34   0.005  9
AC005505|AC005505.8 Plasmodium falciparum chromosome 12 clon...    32   0.005  9
AC116305|AC116305.2 Dictyostelium discoideum chromosome 2 ma...    46   0.006  13
AL845421|AL845421.9 Zebrafish DNA sequence from clone CH211-...    36   0.006  7
AC148391|AC148391.2 Rhinolophus ferrumequinum clone VMRC7-29...    34   0.006  5
AL929356|AL929356.1 Plasmodium falciparum strain 3D7, chromo...    38   0.006  10
Z97348|Z97348.1 Plasmodium falciparum MAL3P1.                      30   0.006  6
AF506028|AF506028.1 Poncirus trifoliata citrus tristeza viru...    32   0.006  9
BX545915|BX545915.7 Zebrafish DNA sequence from clone DKEY-4...    40   0.006  7
DD010736|DD010736.1 Diagnosis of known genetic Parameters wi...    36   0.007  10
AE014825|AE014825.1 Plasmodium falciparum 3D7 chromosome 14 ...    38   0.007  10
AE014829|AE014829.1 Plasmodium falciparum 3D7 chromosome 10 ...    34   0.007  10
AE014845|AE014845.1 Plasmodium falciparum 3D7 chromosome 12,...    32   0.007  10
AC115604|AC115604.2 Dictyostelium discoideum chromosome 2 ma...    34   0.007  7
AE014847|AE014847.1 Plasmodium falciparum 3D7 chromosome 12,...    32   0.008  10
AC123513|AC123513.1 Dictyostelium discoideum chromosome 2 ma...    32   0.008  7
BA000021|BA000021.3 Wigglesworthia glossinidia endosymbiont ...    34   0.008  12
Z98551|Z98551.1 Plasmodium falciparum MAL3P6.                      32   0.008  8
AC005139|AC005139.3 Plasmodium falciparum chromosome 12, ***...    34   0.008  10
AL954867|AL954867.12 Zebrafish DNA sequence from clone DKEY-...    38   0.008  6
AC115592|AC115592.2 Dictyostelium discoideum chromosome 2 ma...    34   0.009  8
AE014850|AE014850.1 Plasmodium falciparum 3D7 chromosome 12,...    32   0.009  9
BH166182|BH166182.1 ENTQX30TF Entamoeba histolytica Sheared ...    38   0.009  2
BH167070|BH167070.1 ENTTO18TR Entamoeba histolytica Sheared ...    38   0.009  2
AZ532843|AZ532843.1 ENTCR94TF Entamoeba histolytica Sheared ...    38   0.009  2
AX392735|AX392735.1 Sequence 25 from Patent WO0212526.             32   0.009  7
AX392733|AX392733.1 Sequence 23 from Patent WO0212526.             34   0.010  8
AX251551|AX251551.1 Sequence 519 from Patent WO0168912.            34   0.010  6
BD453072|BD453072.1 Diagnosis of Diseases Associated with tu...    34   0.010  6
AL732296|AL732296.11 Mouse DNA sequence from clone RP23-131P...    50   0.011  1
AJ421480|AJ421480.1 Mus musculus X-inactivation center regio...    50   0.011  1
AL773526|AL773526.11 Mouse DNA sequence from clone RP23-181M...    50   0.011  1
AX348697|AX348697.1 Sequence 155 from Patent WO0202807.            38   0.011  3
AX346006|AX346006.1 Sequence 1077 from Patent WO0200928.           38   0.011  3
AX344282|AX344282.1 Sequence 129 from Patent WO0200926.            38   0.011  3
AX251888|AX251888.1 Sequence 149 from Patent WO0168911.            38   0.011  3
BD460352|BD460352.1 Diagnosis of Diseases Associated with Ce...    38   0.011  3
BD452274|BD452274.1 Diagnosis of Diseases Associated with Ce...    38   0.011  3
BX897743|BX897743.3 Zebrafish DNA sequence *** SEQUENCING IN...    36   0.012  5
AL035475|AL035475.7 Plasmodium falciparum MAL4P2.                  34   0.013  10
BX908392|BX908392.13 Zebrafish DNA sequence from clone DKEY-...    36   0.014  7
AE014841|AE014841.1 Plasmodium falciparum 3D7 chromosome 11 ...    34   0.015  13
AL953858|AL953858.10 Zebrafish DNA sequence from clone CH211...    40   0.015  6
AL512424|AL512424.14 Human DNA sequence from clone RP11-453E...    48   0.017  3
AC115598|AC115598.2 Dictyostelium discoideum chromosome 2 ma...    40   0.018  8
AL669923|AL669923.8 Mouse DNA sequence *** SEQUENCING IN PRO...    42   0.019  4
AL034557|AL034557.8 Plasmodium falciparum MAL4P1.                  32   0.019  11
AE014840|AE014840.1 Plasmodium falciparum 3D7 chromosome 11 ...    34   0.020  10
BX004970|BX004970.8 Zebrafish DNA sequence from clone DKEY-9I4.    36   0.021  7
AC004688|AC004688.8 Plasmodium falciparum chromosome 12 clon...    32   0.021  9
BX005135|BX005135.5 Zebrafish DNA sequence from clone CH211-...    36   0.021  4
BH826507|BH826507.1 BACPP23-D14.z Pristionchus pacificus BAC...    40   0.022  2
BH824360|BH824360.1 BACPP20-K14.y Pristionchus pacificus BAC...    40   0.022  2
AC100110|AC100110.1 Mus musculus clone RP23-39M21, LOW-PASS ...    32   0.022  5
AL035476|AL035476.7 Plasmodium falciparum MAL4P3.                  34   0.023  10
AC146589|AC146589.22 Medicago truncatula clone mth2-145o21, ...    34   0.024  6

>AE014830|AE014830.1 Plasmodium falciparum 3D7 chromosome 10 section 2
             of 7 of the complete sequence.
          Length = 250029

 Score = 34.2 bits (17), Expect(9) = 1e-06
 Identities = 20/21 (95%)
 Strand = Plus / Plus


Query: 2     tttaaaattttttaattaatt 22
             ||||| |||||||||||||||
Sbjct: 57474 tttaatattttttaattaatt 57494

 Score = 34.2 bits (17), Expect(9) = 1e-06
 Identities = 23/25 (92%)
 Strand = Plus / Minus


Query: 74     ttattaatactattattattctttt 98
              |||||| || |||||||||||||||
Sbjct: 205725 ttattattattattattattctttt 205701

 Score = 32.2 bits (16), Expect(9) = 1e-06
 Identities = 19/20 (95%)
 Strand = Plus / Plus


Query: 74    ttattaatactattattatt 93
             |||||| |||||||||||||
Sbjct: 64265 ttattattactattattatt 64284

 Score = 30.2 bits (15), Expect(9) = 1e-06
 Identities = 15/15 (100%)
 Strand = Plus / Plus


Query: 95     ttttattataaacac 109
              |||||||||||||||
Sbjct: 146525 ttttattataaacac 146539

 Score = 28.2 bits (14), Expect(9) = 1e-06
 Identities = 14/14 (100%)
 Strand = Plus / Plus


Query: 26    tgttttaaattatt 39
             ||||||||||||||
Sbjct: 63947 tgttttaaattatt 63960

 Score = 28.2 bits (14), Expect(9) = 1e-06
 Identities = 14/14 (100%)
 Strand = Plus / Minus


Query: 9      ttttttaattaatt 22
              ||||||||||||||
Sbjct: 220039 ttttttaattaatt 220026

 Score = 26.3 bits (13), Expect(9) = 1e-06
 Identities = 13/13 (100%)
 Strand = Plus / Minus


Query: 93     tcttttattataa 105
              |||||||||||||
Sbjct: 164898 tcttttattataa 164886

 Score = 26.3 bits (13), Expect(9) = 1e-06
 Identities = 19/21 (90%)
 Strand = Plus / Minus


Query: 28     ttttaaattatttcagttatt 48
              ||||| || ||||||||||||
Sbjct: 215663 ttttatataatttcagttatt 215643

 Score = 24.3 bits (12), Expect(9) = 1e-06
 Identities = 12/12 (100%)
 Strand = Plus / Plus


Query: 87    tattattctttt 98
             ||||||||||||
Sbjct: 94331 tattattctttt 94342

Lambda     K      H
    1.37    0.711     1.31

Matrix: blastn matrix:1 -3
Number of Hits to DB: 7,075,137
Number of Sequences: 39953378
Number of extensions: 7075137
Number of successful extensions: 2432664
Number of sequences better than 10.0: 2010
length of query: 169
length of database: ],318,265,086
effective HSP length: 22
effective length of query: 147
effective length of database: \,439,290,770
effective search space: 6532575743190
effective search space used: 6532575743190
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
[blastall] WARNING:  [000.000]  Reached max 400 HSPs in BlastSaveCurrentHsp, continuing with this limit

ANTI-DNA BLAST search was processed by blast@nig.ac.jp, National Institute of Genetics, Japan.

Query= Contig-U02918-1 (Contig-U02918-1Q) /CSM_Contig/Contig-U02918-1Q.Seq.d
         (169 letters)

Database: nrp_B
           3,236,559 sequences; 1,051,180,864 total letters

Searching..................................................done

 ***** No hits found ******

Lambda     K      H
   0.318    0.134    0.401

Gapped
Lambda     K      H
   0.267   0.0410    0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3236559
Number of Hits to DB: 49,286,747
Number of extensions: 96868
Number of sequences better than 10.0: 0
Number of HSP's gapped: 0
Number of HSP's successfully gapped: 0
Length of query: 56
Length of database: 1,051,180,864
Length adjustment: 29
Effective length of query: 27
Effective length of database: 957,320,653
Effective search space: 25847657631
Effective search space used: 25847657631
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 26 (14.6 bits)

 psg: 1.03  gvh: 0.55  alm: 0.10  top: 0.70  tms: 0.07  mit: 0.34  mip: 0.00
 nuc: 0.00  erl: 0.00  erm: 1.00  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 1.00  tyr: 0.39  leu: 0.39  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 1.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 0.00 

	 32.0 %: cytoplasmic
	 24.0 %: mitochondrial
	 20.0 %: nuclear
	  8.0 %: plasma membrane
	  8.0 %: endoplasmic reticulum
	  4.0 %: vesicles of secretory system
	  4.0 %: peroxisomal

>> prediction for Contig-U02918-1 is cyt