>Contig-U15104-1 (Contig-U15104-1Q) /CSM_Contig/Contig-U15104-1Q.Seq.d
GACCAATTTGTTTCAAAATTTTCTAAAACAAAAATTGTAAGCTCGTTACT
AGCTAATAATTATTGTCATAACAAGTCAATTTTATTTCAACCTATATCAA
AATAAAAAAAAAATGAGTAGAGAAAATTTAAAGATTTTAACTCTTGCTGC
TACTATTGGTTTTTCAGTTGCAGNGACTACCTTTTTATTTAGATATTATT
CAAATAATAATCATAATTTATCATCATTTAACGTCCAAGAAAATAATACT
CCAACTACAAAATCAACACCAACACCAACACCAGCTCCAGAACCATCAAC
TAATTCAAATGTTAATAAAGGTCAAAGACAACAACCACAAATATTAGATA
TTGAAGAATTAATCGCAAAATGTGGCTTTTGCAGACCAGAAATGGTAGAT
TCAAATAGAGAAACACCAAATAATTCTATTTCGACATATCATAGACATTA
TTTTATTTGTACTGGTATTCCAAGTGAAGAATGGCCAGCTAAATTATATA
GTGCTACACCACTTTTAGAAAGTTTTCAACAAGTAATGAAAAAGTATGAA
AATAATCCAAGAAAGAATCAAATTATCAATGCAACAGATATTCAACCATT
GAATAAGGATAGCTTAGATGTAATCATTTTCCCAGAAATGGTTAAATTGG
TTGGATTAACTCCAAACACTATGGAAAAAGTTTTAACCTATTTCCAAGAT
AATGATACTATTGATCTTTCAACATTCCCAATGGAAATTCAAGTTGAACA
ATTGAGTGGAAAATATATCTTTATTTGTACTCATAAACAAAAAGATCAAC
GTTGTGGTTATTGTGGTCCAATTTTAGTCGATCAATTAAGAGATCAAATT
AAAGAAAGATCTTTGGAAAAAGAAATTCAAGTATTTGGTACCTCTCATGT
CGGTGGTCATAAATATGCTGGTAACGTTTTGGTTTTCCCACCAGGTAACT
GGTATGGTTATGTAACTCCTGATGATGTCTCCTCAATCATTGATTCTACA
ATCTCTGGTGAAGTCATTCAAAAACTTCATCGTGGTACTATGGGTACTGA
AATCCCAAAAAAAGAAAAAAAAACATTAAAAAAAATATTATCATTATAAT
AAATAAATTTTAAAAAAAAAAATAATTTAAATAAAAAAAAAATAATAATA
ATTTAAAATTTAAAATTA

est1=VFM654F,1,612
est2=VFM566E,10,1123
est3=VSH773F,48,468
est4=VFN183Z,504,1115
est5=VSG625F,508,970
est6=VFJ786Z,519,1084
est7=FC-AC21E,605,1132
est8=VFM654Z,625,1149
est9=VSE184Z,732,1168

tnlfqnflkqkl*ary*LIIIVITSQFYFNLYQNKKKMSRENLKILTLAATIGFSVAXTT
FLFRYYSNNNHNLSSFNVQENNTPTTKSTPTPTPAPEPSTNSNVNKGQRQQPQILDIEEL
IAKCGFCRPEMVDSNRETPNNSISTYHRHYFICTGIPSEEWPAKLYSATPLLESFQQVMK
KYENNPRKNQIINATDIQPLNKDSLDVIIFPEMVKLVGLTPNTMEKVLTYFQDNDTIDLS
TFPMEIQVEQLSGKYIFICTHKQKDQRCGYCGPILVDQLRDQIKERSLEKEIQVFGTSHV
GGHKYAGNVLVFPPGNWYGYVTPDDVSSIIDSTISGEVIQKLHRGTMGTEIPKKEKKTLK
KILSL**infkkknnlnkkkiiii*nlkl

Frame A:
dqfvskfsktkivssllannychnksilfqpisk*kkne*rkfkdfnsccyywffscxdy
lfi*ilfk**s*fiii*rprk*ysnykintntntssrtin*fkc**rskttttniry*ri
nrkmwllqtrngrfk*rntk*fyfdis*tlfylywysk*rmas*ii*cyttfrkfstsne
kv*k*skkesnyqcnrystie*g*lrcnhfprng*igwinskhygksfnlfpr**yy*sf
nipngnss*tiewkiylylys*tkrstlwllwsnfsrsikrsn*rkifgkrnssiwylsc
rws*icw*rfgfptr*lvwlcns**cllnh*fynlw*shsktsswyygy*npkkrkknik
kniiiiinkf*kkk*fk*kknnnnlkfki


Frame B:
tnlfqnflkqkl*ary*LIIIVITSQFYFNLYQNKKKMSRENLKILTLAATIGFSVAXTT
FLFRYYSNNNHNLSSFNVQENNTPTTKSTPTPTPAPEPSTNSNVNKGQRQQPQILDIEEL
IAKCGFCRPEMVDSNRETPNNSISTYHRHYFICTGIPSEEWPAKLYSATPLLESFQQVMK
KYENNPRKNQIINATDIQPLNKDSLDVIIFPEMVKLVGLTPNTMEKVLTYFQDNDTIDLS
TFPMEIQVEQLSGKYIFICTHKQKDQRCGYCGPILVDQLRDQIKERSLEKEIQVFGTSHV
GGHKYAGNVLVFPPGNWYGYVTPDDVSSIIDSTISGEVIQKLHRGTMGTEIPKKEKKTLK
KILSL**infkkknnlnkkkiiii*nlkl


Frame C:
picfkif*nkncklvts**lls*qvnfistyikikkk*veki*rf*llllllvfqlqxlp
fyldiiqiiiiiyhhltskkiilqlqnqhqhqhqlqnhqliqmlikvkdnnhky*ilkn*
sqnvafadqkw*iqiekhqiilfrhiidiilfvlvfqvkngqlnyivlhhf*kvfnk**k
smkiiqeriklsmqqifnh*iria*m*sfsqkwlnwld*lqtlwkkf*piskimillifq
hsqwkfklnn*venislfvlinkkinvvvivvqf*sin*eiklkkdlwkkkfkylvplms
vvinmlvtfwfshqvtgmvm*llmmspqslilqslvksfknfivvlwvlksqkkkkkh*k
kyyhynk*ilkkkii*ikkk***fki*n

Query= Contig-U15104-1 (Contig-U15104-1Q)
/CSM_Contig/Contig-U15104-1Q.Seq.d
         (1168 letters)

Database: CSM
           8402 sequences; 8,075,542 total letters


                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

Contig-U15104-1 (Contig-U15104-1Q) /CSM_Contig/Conti...  2028  0.0
Contig-U12500-1 (Contig-U12500-1Q) /CSM_Contig/Conti...    50  8e-06
Contig-U12557-1 (Contig-U12557-1Q) /CSM_Contig/Conti...    44  5e-04
Contig-U12530-1 (Contig-U12530-1Q) /CSM_Contig/Conti...    44  5e-04
Contig-U11988-1 (Contig-U11988-1Q) /CSM_Contig/Conti...    44  5e-04
Contig-U10941-1 (Contig-U10941-1Q) /CSM_Contig/Conti...    44  5e-04
Contig-U15791-1 (Contig-U15791-1Q) /CSM_Contig/Conti...    42  0.002
Contig-U10723-1 (Contig-U10723-1Q) /CSM_Contig/Conti...    42  0.002
Contig-U09239-1 (Contig-U09239-1Q) /CSM_Contig/Conti...    42  0.002
Contig-U06589-1 (Contig-U06589-1Q) /CSM_Contig/Conti...    42  0.002

>Contig-U15104-1 (Contig-U15104-1Q) /CSM_Contig/Contig-U15104-1Q.Seq.d
          Length = 1168

 Score = 2028 bits (1023), Expect = 0.0
 Identities = 1046/1056 (99%)
 Strand = Plus / Plus

                                                                        
Query: 1    gaccaatttgtttcaaaattttctaaaacaaaaattgtaagctcgttactagctaataat 60
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1    gaccaatttgtttcaaaattttctaaaacaaaaattgtaagctcgttactagctaataat 60

                                                                        
Query: 61   tattgtcataacaagtcaattttatttcaacctatatcaaaatnnnnnnnnnntgagtag 120
            |||||||||||||||||||||||||||||||||||||||||||          |||||||
Sbjct: 61   tattgtcataacaagtcaattttatttcaacctatatcaaaataaaaaaaaaatgagtag 120

                                                                        
Query: 121  agaaaatttaaagattttaactcttgctgctactattggtttttcagttgcagngactac 180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121  agaaaatttaaagattttaactcttgctgctactattggtttttcagttgcagngactac 180

                                                                        
Query: 181  ctttttatttagatattattcaaataataatcataatttatcatcatttaacgtccaaga 240
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181  ctttttatttagatattattcaaataataatcataatttatcatcatttaacgtccaaga 240

                                                                        
Query: 241  aaataatactccaactacaaaatcaacaccaacaccaacaccagctccagaaccatcaac 300
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241  aaataatactccaactacaaaatcaacaccaacaccaacaccagctccagaaccatcaac 300

                                                                        
Query: 301  taattcaaatgttaataaaggtcaaagacaacaaccacaaatattagatattgaagaatt 360
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301  taattcaaatgttaataaaggtcaaagacaacaaccacaaatattagatattgaagaatt 360

                                                                        
Query: 361  aatcgcaaaatgtggcttttgcagaccagaaatggtagattcaaatagagaaacaccaaa 420
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361  aatcgcaaaatgtggcttttgcagaccagaaatggtagattcaaatagagaaacaccaaa 420

                                                                        
Query: 421  taattctatttcgacatatcatagacattattttatttgtactggtattccaagtgaaga 480
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421  taattctatttcgacatatcatagacattattttatttgtactggtattccaagtgaaga 480

                                                                        
Query: 481  atggccagctaaattatatagtgctacaccacttttagaaagttttcaacaagtaatgaa 540
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481  atggccagctaaattatatagtgctacaccacttttagaaagttttcaacaagtaatgaa 540

                                                                        
Query: 541  aaagtatgaaaataatccaagaaagaatcaaattatcaatgcaacagatattcaaccatt 600
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541  aaagtatgaaaataatccaagaaagaatcaaattatcaatgcaacagatattcaaccatt 600

                                                                        
Query: 601  gaataaggatagcttagatgtaatcattttcccagaaatggttaaattggttggattaac 660
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601  gaataaggatagcttagatgtaatcattttcccagaaatggttaaattggttggattaac 660

                                                                        
Query: 661  tccaaacactatggaaaaagttttaacctatttccaagataatgatactattgatctttc 720
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661  tccaaacactatggaaaaagttttaacctatttccaagataatgatactattgatctttc 720

                                                                        
Query: 721  aacattcccaatggaaattcaagttgaacaattgagtggaaaatatatctttatttgtac 780
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721  aacattcccaatggaaattcaagttgaacaattgagtggaaaatatatctttatttgtac 780

                                                                        
Query: 781  tcataaacaaaaagatcaacgttgtggttattgtggtccaattttagtcgatcaattaag 840
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781  tcataaacaaaaagatcaacgttgtggttattgtggtccaattttagtcgatcaattaag 840

                                                                        
Query: 841  agatcaaattaaagaaagatctttggaaaaagaaattcaagtatttggtacctctcatgt 900
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 841  agatcaaattaaagaaagatctttggaaaaagaaattcaagtatttggtacctctcatgt 900

                                                                        
Query: 901  cggtggtcataaatatgctggtaacgttttggttttcccaccaggtaactggtatggtta 960
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 901  cggtggtcataaatatgctggtaacgttttggttttcccaccaggtaactggtatggtta 960

                                                                        
Query: 961  tgtaactcctgatgatgtctcctcaatcattgattctacaatctctggtgaagtcattca 1020
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 961  tgtaactcctgatgatgtctcctcaatcattgattctacaatctctggtgaagtcattca 1020

                                                
Query: 1021 aaaacttcatcgtggtactatgggtactgaaatccc 1056
            ||||||||||||||||||||||||||||||||||||
Sbjct: 1021 aaaacttcatcgtggtactatgggtactgaaatccc 1056


>Contig-U12500-1 (Contig-U12500-1Q) /CSM_Contig/Contig-U12500-1Q.Seq.d
          Length = 1529

 Score = 50.1 bits (25), Expect = 8e-06
 Identities = 31/33 (93%)
 Strand = Plus / Plus

                                            
Query: 251 ccaactacaaaatcaacaccaacaccaacacca 283
           ||||| |||| ||||||||||||||||||||||
Sbjct: 246 ccaacaacaacatcaacaccaacaccaacacca 278


 Score = 44.1 bits (22), Expect = 5e-04
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 264 caacaccaacaccaacaccagc 285
           ||||||||||||||||||||||
Sbjct: 301 caacaccaacaccaacaccagc 322


 Score = 40.1 bits (20), Expect = 0.008
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 264 caacaccaacaccaacacca 283
           ||||||||||||||||||||
Sbjct: 265 caacaccaacaccaacacca 284


 Score = 40.1 bits (20), Expect = 0.008
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 264 caacaccaacaccaacacca 283
           ||||||||||||||||||||
Sbjct: 271 caacaccaacaccaacacca 290


 Score = 40.1 bits (20), Expect = 0.008
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 264 caacaccaacaccaacacca 283
           ||||||||||||||||||||
Sbjct: 283 caacaccaacaccaacacca 302


 Score = 40.1 bits (20), Expect = 0.008
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 264 caacaccaacaccaacacca 283
           ||||||||||||||||||||
Sbjct: 295 caacaccaacaccaacacca 314


 Score = 40.1 bits (20), Expect = 0.008
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 264 caacaccaacaccaacacca 283
           ||||||||||||||||||||
Sbjct: 277 caacaccaacaccaacacca 296


 Score = 40.1 bits (20), Expect = 0.008
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 264 caacaccaacaccaacacca 283
           ||||||||||||||||||||
Sbjct: 289 caacaccaacaccaacacca 308


 Score = 36.2 bits (18), Expect = 0.12
 Identities = 27/30 (90%)
 Strand = Plus / Plus

                                         
Query: 251 ccaactacaaaatcaacaccaacaccaaca 280
           ||||| |||| ||||||| |||||||||||
Sbjct: 222 ccaacaacaacatcaacatcaacaccaaca 251


 Score = 36.2 bits (18), Expect = 0.12
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                             
Query: 264 caacaccaacaccaacac 281
           ||||||||||||||||||
Sbjct: 325 caacaccaacaccaacac 342


 Score = 34.2 bits (17), Expect = 0.47
 Identities = 17/17 (100%)
 Strand = Plus / Plus

                            
Query: 267 caccaacaccaacacca 283
           |||||||||||||||||
Sbjct: 322 caccaacaccaacacca 338


 Score = 32.2 bits (16), Expect = 1.8
 Identities = 19/20 (95%)
 Strand = Plus / Plus

                               
Query: 264 caacaccaacaccaacacca 283
           |||||||||||||| |||||
Sbjct: 307 caacaccaacaccagcacca 326


 Score = 32.2 bits (16), Expect = 1.8
 Identities = 22/24 (91%)
 Strand = Plus / Plus

                                   
Query: 257 acaaaatcaacaccaacaccaaca 280
           |||| ||||||||||||| |||||
Sbjct: 210 acaacatcaacaccaacaacaaca 233


 Score = 32.2 bits (16), Expect = 1.8
 Identities = 19/20 (95%)
 Strand = Plus / Plus

                               
Query: 264 caacaccaacaccaacacca 283
           |||||||| |||||||||||
Sbjct: 313 caacaccagcaccaacacca 332


 Score = 30.2 bits (15), Expect = 7.3
 Identities = 18/19 (94%)
 Strand = Plus / Plus

                              
Query: 262 atcaacaccaacaccaaca 280
           ||||||||||||| |||||
Sbjct: 239 atcaacaccaacaacaaca 257


>Contig-U12557-1 (Contig-U12557-1Q) /CSM_Contig/Contig-U12557-1Q.Seq.d
          Length = 1393

 Score = 44.1 bits (22), Expect = 5e-04
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 262 atcaacaccaacaccaacacca 283
           ||||||||||||||||||||||
Sbjct: 194 atcaacaccaacaccaacacca 215


 Score = 42.1 bits (21), Expect = 0.002
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 258 caaaatcaacaccaacaccaa 278
           |||||||||||||||||||||
Sbjct: 214 caaaatcaacaccaacaccaa 234


 Score = 34.2 bits (17), Expect = 0.47
 Identities = 17/17 (100%)
 Strand = Plus / Plus

                            
Query: 264 caacaccaacaccaaca 280
           |||||||||||||||||
Sbjct: 178 caacaccaacaccaaca 194


 Score = 32.2 bits (16), Expect = 1.8
 Identities = 19/20 (95%)
 Strand = Plus / Plus

                               
Query: 264 caacaccaacaccaacacca 283
           ||||||||||| ||||||||
Sbjct: 184 caacaccaacatcaacacca 203


 Score = 32.2 bits (16), Expect = 1.8
 Identities = 16/16 (100%)
 Strand = Plus / Plus

                           
Query: 258 caaaatcaacaccaac 273
           ||||||||||||||||
Sbjct: 232 caaaatcaacaccaac 247


 Score = 32.2 bits (16), Expect = 1.8
 Identities = 19/20 (95%)
 Strand = Plus / Plus

                               
Query: 264 caacaccaacaccaacacca 283
           ||||| ||||||||||||||
Sbjct: 190 caacatcaacaccaacacca 209


 Score = 30.2 bits (15), Expect = 7.3
 Identities = 27/31 (87%)
 Strand = Plus / Plus

                                          
Query: 253 aactacaaaatcaacaccaacaccaacacca 283
           ||||| || |||| ||||| |||||||||||
Sbjct: 332 aactaaaacatcaccaccaccaccaacacca 362


 Score = 30.2 bits (15), Expect = 7.3
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                          
Query: 264 caacaccaacaccaa 278
           |||||||||||||||
Sbjct: 202 caacaccaacaccaa 216


  Database: CSM
    Posted date:  Jun 21, 2004  1:35 PM
  Number of letters in database: 8,075,542
  Number of sequences in database:  8402
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 26,586
Number of Sequences: 8402
Number of extensions: 26586
Number of successful extensions: 3433
Number of sequences better than 10.0: 415
length of query: 1168
length of database: 8,075,542
effective HSP length: 16
effective length of query: 1152
effective length of database: 7,941,110
effective search space: 9148158720
effective search space used: 9148158720
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 15 (30.2 bits)

Query= Contig-U15104-1 (Contig-U15104-1Q) /CSM_Contig/Contig-U15104-1Q.Seq.d
         (1168 letters)

Database: ddbj_A
           92,845,959 sequences; 95,242,211,685 total letters

Searching..................................................done

                                                             Score    E
Sequences producing significant alignments:                  (bits) Value  N

(BJ435651) Dictyostelium discoideum cDNA clone:ddv27e21, 3' ...  1065   0.0    1
(BJ416465) Dictyostelium discoideum cDNA clone:ddv26c17, 5' ...   983   0.0    2
(BJ416504) Dictyostelium discoideum cDNA clone:ddv26k14, 5' ...   965   0.0    2
(BJ435239) Dictyostelium discoideum cDNA clone:ddv26c17, 3' ...  1011   0.0    1
(BJ433141) Dictyostelium discoideum cDNA clone:ddv20l21, 3' ...   971   0.0    1
(AU266671) Dictyostelium discoideum vegetative cDNA clone:VS...   918   0.0    1
(C23648) Dictyostelium discoideum gamete cDNA, clone FC-AC21.     896   0.0    1
(AU267950) Dictyostelium discoideum vegetative cDNA clone:VS...   698   0.0    2
(AU262929) Dictyostelium discoideum vegetative cDNA clone:VS...   622   e-174  1
(BJ435278) Dictyostelium discoideum cDNA clone:ddv26k14, 3' ...   523   e-144  1
(DY289485) IC0AAA72BH04RM1 CitNFL Citrus clementina cDNA 5',...    48   4e-04  2
(BQ623851) USDA-FP_00931 Ridge pineapple sweet orange entire...    46   8e-04  2
(CO912450) USDA-FP_10544 Rough Lemon seedling root Citrus ja...    46   9e-04  2
(CN181703) UCRCS04_0001F17_f Ruby Orange Developing Flower c...    46   0.001  2
(CX045335) UCRCS07_22B11_g Parent Washington Navel Orange Th...    46   0.001  2
(EY836982) PT11-C2-301-070-B04-CT.F Poncirus trifoliata bark...    46   0.001  2
(EY738084) CS00-C3-705-038-G08-CT.F Sweet orange fruit, deve...    46   0.001  2
(CR971388) mth4-19M23RM1 BAC end, cultivar Jemalong A17 of M...    44   0.001  2
(EX449257) Volcani_8_05_F12 Volcani08 Citrus reticulata x Ci...    46   0.001  2
(EY661112) CS00-C1-101-029-E10-CT.F Sweet orange leaf, infec...    46   0.001  2
(EY715660) CS00-C3-702-057-B07-CT.F Sweet orange fruit, deve...    46   0.001  2
(EY710507) CS00-C3-701-024-A05-CT.F Sweet orange fruit, deve...    46   0.001  2
(DY281567) IC0AAA54BC04RM1 CitNFL Citrus clementina cDNA 5',...    46   0.001  2
(DY289185) IC0AAA71CH06RM1 CitNFL Citrus clementina cDNA 5',...    46   0.001  2
(DY296568) IC0AAA90BD09RM1 CitNFL Citrus clementina cDNA 5',...    46   0.002  2
(AC116305) Dictyostelium discoideum chromosome 2 map 1005175...    42   0.003  14
(CR382128) Yarrowia lipolytica chromosome B of strain CLIB12...    56   0.003  1
(AL414459) T7 end of clone AW0AA031A10 of library AW0AA from...    56   0.003  1
(BP960353) Euphorbia tirucalli mRNA, clone: ETC010E11, 5' end.     42   0.011  2
(EY904688) RR2EF34JQ RR2(MS) Raphanus raphanistrum subsp. ra...    54   0.012  1
(EX303390) 1618010_5_A08_032 PY06 Carica papaya cDNA, mRNA s...    54   0.012  1
(EX271107) 1451725_5_L19_070 PY06 Carica papaya cDNA, mRNA s...    54   0.012  1
(EX269092) 1449717_5_I03_008 PY06 Carica papaya cDNA, mRNA s...    54   0.012  1
(EX258588) 1438789_5_A19_080 PY06 Carica papaya cDNA, mRNA s...    54   0.012  1
(AC117070) Dictyostelium discoideum chromosome 2 map 2097701...    32   0.020  9
(AC009243) Genomic sequence for Arabidopsis thaliana BAC F28...    44   0.033  6
(AL442103) Oryza sativa genomic DNA, chromosome 4, BAC clone...    42   0.14   5
(AM047797) Schistosoma mansoni lung schistosomulum EST, clon...    34   0.15   2
(AM044035) Schistosoma mansoni lung schistosomulum EST, clon...    34   0.15   2
(CD078428) MA3-9999U-L238-C06-U.G MA3-0001 Schistosoma manso...    34   0.15   2
(EU921601) Citrus unshiu clone GB-CU-120 microsatellite sequ...    50   0.19   1
(AC117075) Dictyostelium discoideum chromosome 2 map 5201047...    50   0.19   1
(DU961682) 237240 Tomato MboI BAC Library Solanum lycopersic...    50   0.19   1
(EB631656) AGENCOURT_54974762 D. mojavensis EST Drosophila m...    50   0.19   1
(EB601669) AGENCOURT_54977659 D. mojavensis EST Drosophila m...    50   0.19   1
(DY295693) IC0AAA88DH05RM1 CitNFL Citrus clementina cDNA 5',...    50   0.19   1
(BJ427552) Dictyostelium discoideum cDNA clone:ddv62e19, 5' ...    50   0.19   1
(BJ427532) Dictyostelium discoideum cDNA clone:ddv62p17, 5' ...    50   0.19   1
(BJ423174) Dictyostelium discoideum cDNA clone:ddv48f07, 5' ...    50   0.19   1
(FG632521) CF_WO0_71a10_SP6 Copepod Whole Organism, Normaliz...    50   0.19   1
(EX064333) BR048977 etiolated mature leaf cDNA library KBLW ...    50   0.19   1
(EX063838) BR048482 etiolated mature leaf cDNA library KBLW ...    50   0.19   1
(DU673052) Bst005594 lambda03 Boechera stricta genomic clone...    48   0.20   2
(AL844509) Plasmodium falciparum chromosome 13.                    36   0.22   21
(EY720501) CS00-C3-703-010-D04-CT.F Sweet orange fruit, deve...    46   0.23   2
(EY650273) CS00-C1-100-009-C02-CT.F Sweet orange leaf, green...    46   0.23   2
(AC179842) Strongylocentrotus purpuratus clone R3-1008A14, W...    40   0.32   6
(DT192788) JGI_CAAS1046.rev CAAS Pimephales promelas brain 7...    36   0.37   3
(DJ358590) METHODS AND NUCLEIC ACIDS FOR THE ANALYSIS OF GEN...    48   0.37   2
(CS114309) Sequence 1067 from Patent WO2005054517.                 48   0.37   2
(CS623702) Sequence 253 from Patent WO2006071466.                  48   0.43   3
(AC116986) Dictyostelium discoideum chromosome 2 map 2234041...    40   0.43   12
(DC583487) Diospyros kaki cDNA, clone: KA002_B09, 5' end, ex...    36   0.46   2
(AC177303) Strongylocentrotus purpuratus clone R3-1033E11, W...    40   0.47   4
(FG457588) 011114KAIA003651HT (KAIA) Actinidia chinensis rip...    46   0.56   2
(CI562849) Oryza sativa Japonica Group cDNA, clone: J10B0089...    34   0.56   2
(BE997694) EST429417 GVSN Medicago truncatula cDNA clone pGV...    42   0.59   2
(AC176431) Strongylocentrotus purpuratus clone R3-12B20, WOR...    40   0.67   3
(AC179472) Strongylocentrotus purpuratus clone R3-63K9, WORK...    38   0.71   6
(EV260525) MTYE869TF JCVI-MT1 Medicago truncatula cDNA 5', m...    42   0.72   2
(BJ354889) Dictyostelium discoideum cDNA clone:dda55h01, 3' ...    44   0.75   2
(AC127690) Mus musculus BAC clone RP24-215A3 from chromosome...    48   0.75   1
(CR382127) Yarrowia lipolytica chromosome A of strain CLIB12...    48   0.75   1
(AM445410) Vitis vinifera contig VV78X089877.3, whole genome...    48   0.75   1
(AC124007) Homo sapiens BAC clone RP11-526C12 from 4, comple...    48   0.75   1
(AC108148) Homo sapiens BAC clone RP11-444B12 from 4, comple...    48   0.75   1
(AC225295) Monodelphis domestica clone VMRC18-835M24, WORKIN...    48   0.75   1
(AC214200) Macaca mulatta clone CH250-312H5, WORKING DRAFT S...    48   0.75   1
(AC015822) Homo sapiens chromosome 15 clone RP11-296E7 map 1...    48   0.75   1
(AC015773) Homo sapiens clone RP11-2G11, WORKING DRAFT SEQUE...    48   0.75   1
(BH448346) BOHAP42TR BOHA Brassica oleracea genomic clone BO...    48   0.75   1
(EK561596) 1095521008804 Global-Ocean-Sampling_GS-32-01-01-1...    48   0.75   1
(EI328161) GM_WBc0066G21.f GM_WBc Glycine max genomic clone ...    48   0.75   1
(DX510220) 764_4_14172754_5489_43754_090 Arachis batizocoi m...    48   0.75   1
(AL410759) T7 end of clone AW0AA006F07 of library AW0AA from...    48   0.75   1
(DH331661) Oryzias latipes Fosmid clone:GOLWFno696_p06, forw...    48   0.75   1
(DH069535) Oryzias latipes Fosmid clone:GOLWFno141_f17, forw...    48   0.75   1
(AG635451) Macaca fuscata fuscata DNA, clone: MSB2-039H16_R,...    48   0.75   1
(EV089118) BNSCS5CT_UP_159_A08_30MAY2007_064 Brassica napus ...    48   0.75   1
(EE623886) CHWS1900.b1_H20.ab1 CHW(LMS) silverleaf sunflower...    48   0.75   1
(EE616475) CHWM3938.b1_D01.ab1 CHW(LMS) silverleaf sunflower...    48   0.75   1
(CF418453) USDA-FP_116000-386 Immature Ovaries from field co...    48   0.75   1
(BM519933) sak86d10.y1 Gm-c1057 Glycine soja cDNA clone SOYB...    48   0.75   1
(BM187962) saj83b05.y1 Gm-c1074 Glycine max cDNA clone SOYBE...    48   0.75   1
(BE441013) sp30g05.y1 Gm-c1042 Glycine max cDNA clone GENOME...    48   0.75   1
(FK020320) GLNDK87TF JCVI-SOY3 Glycine max cDNA 5', mRNA seq...    48   0.75   1
(FK016184) GLNC896TF JCVI-SOY3 Glycine max cDNA 5', mRNA seq...    48   0.75   1
(FD979314) RR3GA83TF RR3(NY) Raphanus raphanistrum subsp. ra...    48   0.75   1
(FD975378) RR3GA83JQ RR3(NY) Raphanus raphanistrum subsp. ra...    48   0.75   1
(FD576185) RS2G369JQ RS2(RS) Raphanus sativus cDNA 3', mRNA ...    48   0.75   1

>(BJ435651) Dictyostelium discoideum cDNA clone:ddv27e21, 3' end,
            single read.
          Length = 612

 Score = 1065 bits (537), Expect = 0.0
 Identities = 548/553 (99%)
 Strand = Plus / Minus


Query: 504  ctacaccacttttagaaagttttcaacaagtaatgaaaaagtatgaaaataatccaagaa 563
            ||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||
Sbjct: 612  ctacaccacttttagaaagttttcaacaagtaatgaaaaagtatgaaaataatncaggaa 553


Query: 564  agaatcaaattatcaatgcaacagatattcaaccattgaataaggatagcttagatgtaa 623
            | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 552  anaatcaaattatcaatgcaacagatattcaaccattgaataaggatagcttagatgtaa 493


Query: 624  tcattttcccagaaatggttaaattggttggattaactccaaacactatggaaaaagttt 683
            ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 492  tcattttcccanaaatggttaaattggttggattaactccaaacactatggaaaaagttt 433


Query: 684  taacctatttccaagataatgatactattgatctttcaacattcccaatggaaattcaag 743
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 432  taacctatttccaagataatgatactattgatctttcaacattcccaatggaaattcaag 373


Query: 744  ttgaacaattgagtggaaaatatatctttatttgtactcataaacaaaaagatcaacgtt 803
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 372  ttgaacaattgagtggaaaatatatctttatttgtactcataaacaaaaagatcaacgtt 313


Query: 804  gtggttattgtggtccaattttagtcgatcaattaagagatcaaattaaagaaagatctt 863
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 312  gtggttattgtggtccaattttagtcgatcaattaagagatcaaattaaagaaagatctt 253


Query: 864  tggaaaaagaaattcaagtatttggtacctctcatgtcggtggtcataaatatgctggta 923
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 252  tggaaaaagaaattcaagtatttggtacctctcatgtcggtggtcataaatatgctggta 193


Query: 924  acgttttggttttcccaccaggtaactggtatggttatgtaactcctgatgatgtctcct 983
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 192  acgttttggttttcccaccaggtaactggtatggttatgtaactcctgatgatgtctcct 133


Query: 984  caatcattgattctacaatctctggtgaagtcattcaaaaacttcatcgtggtactatgg 1043
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 132  caatcattgattctacaatctctggtgaagtcattcaaaaacttcatcgtggtactatgg 73


Query: 1044 gtactgaaatccc 1056
            | |||||||||||
Sbjct: 72   gnactgaaatccc 60

Lambda     K      H
    1.37    0.711     1.31

Matrix: blastn matrix:1 -3
Number of Sequences: 92845959
Number of Hits to DB: 1,408,989,361
Number of extensions: 87016632
Number of successful extensions: 7080751
Number of sequences better than 10.0: 231
Length of query: 1168
Length of database: 95,242,211,685
Length adjustment: 24
Effective length of query: 1144
Effective length of database: 97,308,875,965
Effective search space: 111321354103960
Effective search space used: 111321354103960
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)

Query= Contig-U15104-1 (Contig-U15104-1Q) /CSM_Contig/Contig-U15104-1Q.Seq.d
         (1168 letters)

Database: nrp_B
           3,236,559 sequences; 1,051,180,864 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT052503_1(BT052503|pid:none) Medicago truncatula clone MTYFD_FE...   132   3e-29
AY085366_1(AY085366|pid:none) Arabidopsis thaliana clone 148108 ...   130   7e-29
AY070744_1(AY070744|pid:none) Arabidopsis thaliana AT5g40510/MNF...   130   7e-29
EU965601_1(EU965601|pid:none) Zea mays clone 287339 sucrose clea...   130   1e-28
BT036152_1(BT036152|pid:none) Zea mays full-length cDNA clone ZM...   130   1e-28
AX172673_1(AX172673|pid:none) Sequence 163 from Patent WO0144476.     129   2e-28
S51376(S51376) sucrose cleavage protein - potato  &S74161_1(S741...   126   1e-27
AY058090_1(AY058090|pid:none) Arabidopsis thaliana AT4g26620/T15...   122   2e-26
AK104276_1(AK104276|pid:none) Oryza sativa Japonica Group cDNA c...   122   3e-26
AP004179_5(AP004179|pid:none) Oryza sativa Japonica Group genomi...   122   3e-26
AY058067_1(AY058067|pid:none) Arabidopsis thaliana AT3g27570/MMJ...   121   5e-26
AK317244_1(AK317244|pid:none) Arabidopsis thaliana AT3G27570 mRN...   121   5e-26
AK228503_1(AK228503|pid:none) Arabidopsis thaliana mRNA for sucr...   121   5e-26
AB025626_11(AB025626|pid:none) Arabidopsis thaliana genomic DNA,...   118   5e-25
EU962681_1(EU962681|pid:none) Zea mays clone 244707 hypothetical...   113   1e-23
AB026659_1(AB026659|pid:none) Arabidopsis thaliana genomic DNA, ...   110   1e-22
AM477619_2(AM477619|pid:none) Vitis vinifera contig VV78X218366....   108   4e-22
CR382130_107(CR382130|pid:none) Yarrowia lipolytica strain CLIB1...    77   1e-12
AM494972_651(AM494972|pid:none) Leishmania braziliensis chromoso...    75   6e-12
AL078465_7(AL078465|pid:none) Arabidopsis thaliana DNA chromosom...    74   8e-12
CT005272_638(CT005272|pid:none) Leishmania major strain Friedlin...    72   3e-11
AE016818_386(AE016818|pid:none) Ashbya gossypii (= Eremothecium ...    71   8e-11
CU928174_256(CU928174|pid:none) Zygosaccharomyces rouxii strain ...    67   1e-09
FN392319_463(FN392319|pid:none) Pichia pastoris GS115 chromosome...    66   3e-09
FN392320_871(FN392320|pid:none) Pichia pastoris GS115 chromosome...    65   5e-09
AY421966_7(AY421966|pid:none) Cryptococcus gattii strain ATCC 32...    65   6e-09
AM270361_15(AM270361|pid:none) Aspergillus niger contig An16c009...    63   2e-08
CU928167_418(CU928167|pid:none) Kluyveromyces thermotolerans str...    63   2e-08
AE2138(AE2138) hypothetical protein alr2660 [imported] - Nostoc ...    63   2e-08
CR380952_211(CR380952|pid:none) Candida glabrata strain CBS138 c...    61   7e-08
AP007154_359(AP007154|pid:none) Aspergillus oryzae RIB40 genomic...    61   7e-08
FM992695_697(FM992695|pid:none) Candida dubliniensis CD36 chromo...    58   7e-07
CU640366_1022(CU640366|pid:none) Podospora anserina genomic DNA ...    57   1e-06
CP000502_90(CP000502|pid:none) Pichia stipitis CBS 6054 chromoso...    57   2e-06
CP000957_135(CP000957|pid:none) Synechococcus sp. PCC 7002 plasm...    56   3e-06
CU928167_115(CU928167|pid:none) Kluyveromyces thermotolerans str...    55   4e-06
AL451018_20(AL451018|pid:none) Neurospora crassa DNA linkage gro...    54   1e-05
AM920427_429(AM920427|pid:none) Penicillium chrysogenum Wisconsi...    54   1e-05
(P38281) RecName: Full=Actin patches distal protein 1;  &AY69304...    54   1e-05
CR382138_792(CR382138|pid:none) Debaryomyces hansenii strain CBS...    54   1e-05
AM270078_14(AM270078|pid:none) Aspergillus niger contig An04c017...    53   2e-05
AP007164_45(AP007164|pid:none) Aspergillus oryzae RIB40 genomic ...    52   5e-05
CR382121_345(CR382121|pid:none) Kluyveromyces lactis strain NRRL...    51   9e-05
AE016819_616(AE016819|pid:none) Ashbya gossypii (= Eremothecium ...    51   9e-05
AM270320_51(AM270320|pid:none) Aspergillus niger contig An14c013...    50   2e-04
CP000828_3266(CP000828|pid:none) Acaryochloris marina MBIC11017,...    49   3e-04
CU633895_283(CU633895|pid:none) Podospora anserina genomic DNA c...    49   3e-04
AM920437_601(AM920437|pid:none) Penicillium chrysogenum Wisconsi...    47   0.002
AB220984_1(AB220984|pid:none) Magnaporthe grisea gene for FMI1 p...    47   0.002
CP000285_1032(CP000285|pid:none) Chromohalobacter salexigens DSM...    46   0.003
BA000022_19(BA000022|pid:none) Synechocystis sp. PCC 6803 DNA, c...    46   0.003
AG2128(AG2128) hypothetical protein alr2582 [imported] - Nostoc ...    45   0.005
AG2053(AG2053) hypothetical protein all1981 [imported] - Nostoc ...    45   0.005
CP000117_4312(CP000117|pid:none) Anabaena variabilis ATCC 29413,...    45   0.006
CP000431_3422(CP000431|pid:none) Rhodococcus jostii RHA1, comple...    45   0.006
CP000159_1859(CP000159|pid:none) Salinibacter ruber DSM 13855, c...    44   0.014
CP001037_313(CP001037|pid:none) Nostoc punctiforme PCC 73102, co...    43   0.019
CP000769_2534(CP000769|pid:none) Anaeromyxobacter sp. Fw109-5, c...    42   0.032
AI2131(AI2131) hypothetical protein all2608 [imported] - Nostoc ...    42   0.042
CP000724_3400(CP000724|pid:none) Alkaliphilus metalliredigens QY...    42   0.055
CR931997_1715(CR931997|pid:none) Corynebacterium jeikeium K411 c...    41   0.094
CP000155_3286(CP000155|pid:none) Hahella chejuensis KCTC 2396, c...    40   0.21
CP000509_4324(CP000509|pid:none) Nocardioides sp. JS614, complet...    39   0.27
CP000384_5230(CP000384|pid:none) Mycobacterium sp. MCS, complete...    38   0.61
CP000580_5581(CP000580|pid:none) Mycobacterium sp. JLS, complete...    38   0.61
AX773535_1(AX773535|pid:none) Sequence 51 from Patent WO03046123...    38   0.79
CP000509_4327(CP000509|pid:none) Nocardioides sp. JS614, complet...    38   0.79
AF159510_8(AF159510|pid:none) Brevibacterium flavum carotenoid b...    38   0.79
CP000269_3246(CP000269|pid:none) Janthinobacterium sp. Marseille...    37   1.0
AY665586_1(AY665586|pid:none) Rattus norvegicus strain CD aldehy...    37   1.4
BX248355_221(BX248355|pid:none) Corynebacterium diphtheriae grav...    37   1.4
CP001229_168(CP001229|pid:none) Sulfurihydrogenibium azorense Az...    37   1.4
AL939125_80(AL939125|pid:none) Streptomyces coelicolor A3(2) com...    37   1.8
AM398681_1729(AM398681|pid:none) Flavobacterium psychrophilum JI...    36   2.3
AM431582_1(AM431582|pid:none) Vitis vinifera contig VV78X258697....    36   2.3
AF266462_11(AF266462|pid:none) Clostridium beijerinckii nitrogen...    36   2.3
AP008957_1040(AP008957|pid:none) Rhodococcus erythropolis PR4 DN...    35   3.9
BA000030_2435(BA000030|pid:none) Streptomyces avermitilis MA-468...    35   3.9
CP001116_41(CP001116|pid:none) Deinococcus deserti VCD115 plasmi...    35   3.9
AM114193_1378(AM114193|pid:none) Uncultured methanogenic archaeo...    35   3.9
AX172579_1(AX172579|pid:none) Sequence 69 from Patent WO0144476.       35   5.1
AE006470_1633(AE006470|pid:none) Chlorobium tepidum TLS, complet...    34   8.8
AP007255_2479(AP007255|pid:none) Magnetospirillum magneticum AMB...    34   8.8

>BT052503_1(BT052503|pid:none) Medicago truncatula clone
            MTYFD_FE_FF_FG1G-I-7 unknown mRNA.
          Length = 344

 Score =  132 bits (331), Expect = 3e-29
 Identities = 87/245 (35%), Positives = 128/245 (52%), Gaps = 17/245 (6%)
 Frame = +2

Query: 374  GFCRPEMVDSNRETPNNSISTYHRHYFICTGIPSEEWPAKLYSAT--PLLESFQQVMKKY 547
            GF RPEM     E    ++  Y RH F+        WP ++ ++   PL +      K
Sbjct: 11   GFTRPEMYT---EKLAGTVDAYDRHVFLYYK-NHLSWPPRVEASDDHPLPKLVADTFKA- 65

Query: 548  ENNPRKNQIINATDI---QPLNKDSL---DVIIFPEMVKLVGLTPNTMEKVLTYFQDNDT 709
                RKN +   T I   +   +D     DV+IFPEMVK  GL  + +E   ++F+D
Sbjct: 66   ----RKNDLALKTKITVCEASEEDGFSDGDVLIFPEMVKYRGLVESNVE---SFFED--- 115

Query: 710  IDLSTFPMEIQV-EQLSGKYIFICTHKQKDQRCGYCGPILVDQLRDQIKERSLEKEIQVF 886
            + ++  P  I V E L+G ++++C H  +D RCG CGP+L+    ++I+ R L+ +I V
Sbjct: 116  VLVNDKPWAIGVPEVLTGSHVYVCAHGSRDVRCGTCGPVLIKNFNEEIELRGLKDQISVT 175

Query: 887  GTSHVGGHKYAGNVLVFPP-------GNWYGYVTP-XXXXXXXXXXXXGEVIQKLHRGTM 1042
              SH+GGHKYAGN++++ P       G+WYGYVTP             GEVIQ+L RG M
Sbjct: 176  ACSHLGGHKYAGNIIIYSPGPDGKTMGHWYGYVTPNDIPDLLDQHIAKGEVIQRLWRGQM 235

Query: 1043 GTEIP 1057
            G  +P
Sbjct: 236  GPSVP 240

Lambda     K      H
   0.318    0.134    0.401

Gapped
Lambda     K      H
   0.267   0.0410    0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3236559
Number of Hits to DB: 1,580,405,436
Number of extensions: 30172850
Number of successful extensions: 67661
Number of sequences better than 10.0: 83
Number of HSP's gapped: 67550
Number of HSP's successfully gapped: 84
Length of query: 389
Length of database: 1,051,180,864
Length adjustment: 130
Effective length of query: 259
Effective length of database: 630,428,194
Effective search space: 163280902246
Effective search space used: 163280902246
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)

 psg: 0.96  gvh: 0.64  alm: 0.39  top: 0.40  tms: 0.00  mit: 0.31  mip: 0.08
 nuc: 0.06  erl: 0.00  erm: 0.20  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 1.00 

	 40.0 %: extracellular, including cell wall
	 16.0 %: cytoplasmic
	 12.0 %: mitochondrial
	 12.0 %: vacuolar
	  8.0 %: nuclear
	  8.0 %: endoplasmic reticulum
	  4.0 %: Golgi

>> prediction for Contig-U15104-1 is exc