| Contig-U15077-1 |
| Contig ID |
Contig-U15077-1 |
| Contig update |
2004. 6.11 |
| Contig sequence |
 |
| Gap |
no gap |
| Contig length |
1288 |
| Chromosome number (1..6, M) |
2 |
| Chromosome length |
8467578 |
| Start point |
5895911 |
| End point |
5894660 |
| Strand (PLUS/MINUS) |
MINUS |
| Number of clones |
9 |
| Number of EST |
11 |
| Link to clone list |
U15077 |
| List of clone(s) |
|
| Translated Amino Acid sequence |
|
| Translated Amino Acid sequence (All Frames) |
|
| own update |
2004. 6.23 |
| Homology vs CSM-cDNA |
|
| dna update |
2009. 1.11 |
| Homology vs DNA |
Query= Contig-U15077-1 (Contig-U15077-1Q) /CSM_Contig/Contig-U15077-1Q.Seq.d
(1288 letters)
Database: ddbj_A
92,845,959 sequences; 95,242,211,685 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value N
(AC115598) Dictyostelium discoideum chromosome 2 map 581427-... 341 0.0 8
(AU265623) Dictyostelium discoideum vegetative cDNA clone:VS... 287 e-174 3
(AU266866) Dictyostelium discoideum vegetative cDNA clone:VS... 494 e-168 4
(AU266863) Dictyostelium discoideum vegetative cDNA clone:VS... 293 e-162 5
(AU263254) Dictyostelium discoideum vegetative cDNA clone:VS... 333 e-133 3
(C94403) Dictyostelium discoideum slug cDNA, clone SSK652. 309 e-126 3
(C25754) Dictyostelium discoideum gamete cDNA, clone FC-AZ08. 121 6e-90 5
(AU073601) Dictyostelium discoideum slug cDNA, clone SSH644. 200 4e-76 3
(AU038384) Dictyostelium discoideum slug cDNA, clone SSH644. 80 2e-19 2
(AU261724) Dictyostelium discoideum vegetative cDNA clone:VS... 80 2e-10 1
(BJ364911) Dictyostelium discoideum cDNA clone:ddc33o08, 5' ... 64 1e-05 1
(AC116919) Dictyostelium discoideum chromosome 2 map complem... 54 0.014 1
(CU469464) Candidatus Phytoplasma mali strain AT complete ch... 38 0.034 12
(AL929357) Plasmodium falciparum strain 3D7, chromosome 9; s... 38 0.047 9
(CT025938) Zebrafish DNA sequence from clone CH211-72M2 in l... 52 0.053 1
(Y18930) Sulfolobus solfataricus 281 kb genomic DNA fragment... 52 0.053 1
(AE006697) Sulfolobus solfataricus P2 section 56 of 272 of t... 52 0.053 1
(CR847793) Zebrafish DNA sequence from clone CH211-59D13. 36 0.13 6
(CR931794) Mouse DNA sequence from clone RP23-470B20 on chro... 50 0.21 1
(CT856397) Oryza sativa Indica Group EST sequence:OSIGCRN134... 46 0.33 2
(AC151169) Bos taurus clone CH240-524E7, WORKING DRAFT SEQUE... 36 0.47 2
(AF083031) Guillardia theta nucleomorph chromosome 3, comple... 34 0.50 9
(AC208734) Populus trichocarpa clone JGIACSB1073-L15, comple... 44 0.61 2
(BX899180) Zebrafish DNA sequence from clone DKEY-287G19 in ... 48 0.83 1
(AC131302) Mus musculus chromosome 1, clone RP24-117I22, com... 48 0.83 1
(AC152793) Bos taurus clone CH240-14J16, *** SEQUENCING IN P... 48 0.83 1
(AC101563) Mus musculus clone RP23-195B9, LOW-PASS SEQUENCE ... 48 0.83 1
(AC223870) Bos taurus clone CH240-456A2, WORKING DRAFT SEQUE... 48 0.83 1
(AM611438) Entamoeba invadens IP1 GSS, clone inv006g02.q1k. 48 0.83 1
(BZ008033) oei89c10.b1 B.oleracea002 Brassica oleracea genom... 48 0.83 1
(EK112548) 1092963131079 Global-Ocean-Sampling_GS-31-01-01-1... 38 0.85 2
(AC007587) Drosophila melanogaster clone BACR02D22, complete... 46 0.90 4
(AU262098) Dictyostelium discoideum vegetative cDNA clone:VS... 40 0.95 2
(AM468844) Vitis vinifera contig VV78X012404.5, whole genome... 38 1.3 4
(AC211035) Solanum lycopersicum chromosome 6 clone C06HBa006... 44 1.4 3
(DX507827) 803_6_14286881_5489_44248_065 Limanthese alba met... 40 2.5 2
(AX347077) Sequence 2148 from Patent WO0200928. 38 2.6 7
(AM438564) Vitis vinifera, whole genome shotgun sequence, co... 44 2.8 2
(AM608603) Entamoeba invadens IP1 GSS, clone inv090e12.p1k. 44 3.3 2
(CT737136) Zebrafish DNA sequence from clone DKEYP-12B1 in l... 46 3.3 1
(CR376736) Zebrafish DNA sequence from clone DKEYP-86G11 in ... 46 3.3 1
(BX897727) Zebrafish DNA sequence from clone DKEY-90A13 in l... 46 3.3 1
(AC116776) Mus musculus chromosome 3, clone RP24-472H5, comp... 46 3.3 1
(AC200464) Macaca mulatta BAC CH250-283K3 (Children's Hospi... 46 3.3 1
(AL031745) Plasmodium falciparum DNA from MAL1P2. 46 3.3 1
(AF538053) Monosiga brevicollis mitochondrion, complete genome. 46 3.3 1
(AE013599) Drosophila melanogaster chromosome 2R, complete s... 46 3.3 1
(AC009353) Drosophila melanogaster clone BACR32F22, complete... 46 3.3 1
(AC149860) Papio anubis clone RP41-366A22, WORKING DRAFT SEQ... 46 3.3 1
(AC149193) Papio anubis clone RP41-70E17, WORKING DRAFT SEQU... 46 3.3 1
(AC137466) Rattus norvegicus clone CH230-unknown, *** SEQUEN... 46 3.3 1
(AC136952) Danio rerio clone ch211-31g3, WORKING DRAFT SEQUE... 46 3.3 1
(AC132958) Rattus norvegicus clone CH230-402I22, WORKING DRA... 46 3.3 1
(AC118916) Rattus norvegicus clone CH230-177J9, WORKING DRAF... 46 3.3 1
(AC111279) Rattus norvegicus clone CH230-51F3, *** SEQUENCIN... 46 3.3 1
(AC101551) Mus musculus clone RP23-193O16, LOW-PASS SEQUENCE... 46 3.3 1
(CU928607) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 46 3.3 1
(CU915597) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 46 3.3 1
(CU694794) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 46 3.3 1
(CU405707) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 46 3.3 1
(AC230842) Bos taurus clone CH240-497I18, WORKING DRAFT SEQU... 46 3.3 1
(AC217669) Zea mays chromosome 1 clone CH201-242F6; ZMMBBc02... 46 3.3 1
(AC211839) Chlorocebus aethiops clone CH252-73I23, WORKING D... 46 3.3 1
(AC210610) Zea mays chromosome 1 clone CH201-534E11; ZMMBBc0... 46 3.3 1
(AC205444) Nomascus leucogenys leucogenys clone CH271-360O8,... 46 3.3 1
(AC200376) Nomascus leucogenys leucogenys clone CH271-311M5,... 46 3.3 1
(AC193842) Colobus guereza clone CH272-66F18, WORKING DRAFT ... 46 3.3 1
(AC185050) Bos taurus clone CH240-262M2, WORKING DRAFT SEQUE... 46 3.3 1
(AC183021) Bos taurus clone CH240-116D15, WORKING DRAFT SEQU... 46 3.3 1
(AC179519) Strongylocentrotus purpuratus clone R3-1035E10, W... 46 3.3 1
(AC177970) Strongylocentrotus purpuratus clone R3-3049L12, W... 46 3.3 1
(AC175144) Bos taurus clone CH240-524F9, WORKING DRAFT SEQUE... 46 3.3 1
(AC169394) Macaca mulatta clone CH250-38M24, WORKING DRAFT S... 46 3.3 1
(AC166839) Bos taurus clone CH240-189H11, WORKING DRAFT SEQU... 46 3.3 1
(AM666094) Entamoeba terrapinae GSS, clone terra041g02.p1k. 46 3.3 1
(AM663880) Entamoeba moshkovskii FIC GSS, clone mosh029d02.q1k. 46 3.3 1
(AM663822) Entamoeba moshkovskii FIC GSS, clone mosh029a06.q1k. 46 3.3 1
(AM663695) Entamoeba moshkovskii FIC GSS, clone mosh022e02.q1k. 46 3.3 1
(AM654381) Entamoeba moshkovskii FIC GSS, clone mosh012f08.q1k. 46 3.3 1
(AM653403) Entamoeba moshkovskii FIC GSS, clone mosh131a05.p1k. 46 3.3 1
(AM644628) Entamoeba moshkovskii FIC GSS, clone mosh013c12.p1k. 46 3.3 1
(AM643806) Entamoeba moshkovskii FIC GSS, clone mosh002f07.q1k. 46 3.3 1
(AM643524) Entamoeba dispar GSS, clone dispar84f10.p1k. 46 3.3 1
(AM643090) Entamoeba dispar GSS, clone dispar102c04.p1k. 46 3.3 1
(AM641910) Entamoeba dispar GSS, clone dispar90c08.q1k. 46 3.3 1
(AM637537) Entamoeba dispar GSS, clone dispar46a10.q1k. 46 3.3 1
(AM637365) Entamoeba dispar GSS, clone dispar45a12.q1k. 46 3.3 1
(AM635292) Entamoeba dispar GSS, clone dispar132g09.p1k. 46 3.3 1
(AM631396) Entamoeba dispar GSS, clone dispar68b06.p1k. 46 3.3 1
(AM629934) Entamoeba dispar GSS, clone dispar47g01.p1k. 46 3.3 1
(AM628495) Entamoeba dispar GSS, clone dispar29e07.q1k. 46 3.3 1
(AM625101) Entamoeba dispar GSS, clone dispar115b06.p1k. 46 3.3 1
(AM620875) Entamoeba invadens IP1 GSS, clone inv049g09.p1k. 46 3.3 1
(AM614371) Entamoeba invadens IP1 GSS, clone inv048a02.q1k. 46 3.3 1
(AM608023) Entamoeba invadens IP1 GSS, clone inv084h06.p1k. 46 3.3 1
(AM607476) Entamoeba invadens IP1 GSS, clone inv079e07.q1k. 46 3.3 1
(AM605609) Entamoeba invadens IP1 GSS, clone inv052d12.q1k. 46 3.3 1
(EI087050) hhe0001ab12.b1 hhe Oryza ridleyi genomic clone hh... 46 3.3 1
(DU945382) 374163 Tomato EcoRI BAC Library Solanum lycopersi... 46 3.3 1
(AG846305) Oryza sativa Indica Group genomic DNA, BAC end se... 46 3.3 1
>(AC115598) Dictyostelium discoideum chromosome 2 map 581427-735498
strain AX4, complete sequence.
Length = 154071
Score = 341 bits (172), Expect(8) = 0.0
Identities = 172/172 (100%)
Strand = Plus / Plus
Query: 868 gtgatgcacaattaaaaaatataattacaattggaaaattcattagatcttataaattac 927
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6636 gtgatgcacaattaaaaaatataattacaattggaaaattcattagatcttataaattac 6695
Query: 928 caccaggtacagattcttcaaagattaaagcaacaatggatgatggtctattagaaatta 987
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6696 caccaggtacagattcttcaaagattaaagcaacaatggatgatggtctattagaaatta 6755
Query: 988 ttattccaaaagatactccatctgaagatagattgaaaattccaattcaatc 1039
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6756 ttattccaaaagatactccatctgaagatagattgaaaattccaattcaatc 6807
Score = 293 bits (148), Expect(8) = 0.0
Identities = 148/148 (100%)
Strand = Plus / Plus
Query: 559 gatgaatgtgtttgatcatagactcatctcaagtaattcaaatcatagaataaatatttg 618
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6328 gatgaatgtgtttgatcatagactcatctcaagtaattcaaatcatagaataaatatttg 6387
Query: 619 gagaccaacagtatcaattaaagataacaaaactcatatatcaattatatttgaattagc 678
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6388 gagaccaacagtatcaattaaagataacaaaactcatatatcaattatatttgaattagc 6447
Query: 679 aggtattagtagagaccaaatttcaatc 706
||||||||||||||||||||||||||||
Sbjct: 6448 aggtattagtagagaccaaatttcaatc 6475
Score = 200 bits (101), Expect(8) = 0.0
Identities = 101/101 (100%)
Strand = Plus / Plus
Query: 707 cgaagttacaaaagaaaatactttagtaattactggcgaaaagaaatctaaaggcggttt 766
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6475 cgaagttacaaaagaaaatactttagtaattactggcgaaaagaaatctaaaggcggttt 6534
Query: 767 aaataatttaccatcatcttcatcatcaatcaattcagatt 807
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 6535 aaataatttaccatcatcttcatcatcaatcaattcagatt 6575
Score = 121 bits (61), Expect(8) = 0.0
Identities = 61/61 (100%)
Strand = Plus / Plus
Query: 204 acacaccacattaattatttacatatatttataaatttcatccatttgttaccattccag 263
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5800 acacaccacattaattatttacatatatttataaatttcatccatttgttaccattccag 5859
Query: 264 g 264
|
Sbjct: 5860 g 5860
Score = 79.8 bits (40), Expect(8) = 0.0
Identities = 40/40 (100%)
Strand = Plus / Plus
Query: 1179 taattttaaataattttaaataaaagtttggactgtaatg 1218
||||||||||||||||||||||||||||||||||||||||
Sbjct: 6944 taattttaaataattttaaataaaagtttggactgtaatg 6983
Score = 77.8 bits (39), Expect(8) = 0.0
Identities = 39/39 (100%)
Strand = Plus / Plus
Query: 20 ctcaaacacacacaaacgagaaagagtagagataaatag 58
|||||||||||||||||||||||||||||||||||||||
Sbjct: 5616 ctcaaacacacacaaacgagaaagagtagagataaatag 5654
Score = 65.9 bits (33), Expect(8) = 0.0
Identities = 39/41 (95%)
Strand = Plus / Plus
Query: 415 atggaattcgacccaagacgtgaaatgagaaaatgtaggtg 455
||||||||||||||||||||||||| ||||||| |||||||
Sbjct: 6185 atggaattcgacccaagacgtgaaaggagaaaaggtaggtg 6225
Score = 44.1 bits (22), Expect(8) = 0.0
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 530 ctctcttctctaaaaatagtgc 551
||||||||||||||||||||||
Sbjct: 6299 ctctcttctctaaaaatagtgc 6320
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Number of Sequences: 92845959
Number of Hits to DB: 913,368,406
Number of extensions: 62623711
Number of successful extensions: 5641151
Number of sequences better than 10.0: 131
Length of query: 1288
Length of database: 95,242,211,685
Length adjustment: 24
Effective length of query: 1264
Effective length of database: 97,308,875,965
Effective search space: 122998419219760
Effective search space used: 122998419219760
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)
|
| protein update |
2009. 7.14 |
| Homology vs Protein |
Query= Contig-U15077-1 (Contig-U15077-1Q) /CSM_Contig/Contig-U15077-1Q.Seq.d
(1288 letters)
Database: nrp_B
3,236,559 sequences; 1,051,180,864 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
JC4377(JC4377) low-molecular-weight heat-shock protein - rice &... 44 0.010
(Q84J50) RecName: Full=17.4 kDa class I heat shock protein 2; &... 44 0.010
M80186_1(M80186|pid:none) Oryza sativa LMW heat shock protein mR... 44 0.010
(P31673) RecName: Full=17.4 kDa class I heat shock protein 1; &... 44 0.010
AY585984_1(AY585984|pid:none) Paxillus involutus strain Pi01SE s... 44 0.010
D12635_1(D12635|pid:none) Oryza sativa Japonica Group mRNA for l... 44 0.013
AP009178_1628(AP009178|pid:none) Nitratiruptor sp. SB155-2 genom... 43 0.022
CP000319_1823(CP000319|pid:none) Nitrobacter hamburgensis X14, c... 43 0.028
BX571660_192(BX571660|pid:none) Wolinella succinogenes, complete... 42 0.037
AY585983_1(AY585983|pid:none) Paxillus involutus strain ATCC 200... 42 0.063
CP000688_829(CP000688|pid:none) Dehalococcoides sp. BAV1, comple... 42 0.063
AY284925_1(AY284925|pid:none) Capsicum frutescens chloroplast sm... 42 0.063
AJ965256_766(AJ965256|pid:none) Dehalococcoides sp. CBDB1 comple... 42 0.063
BT071005_1(BT071005|pid:none) Picea sitchensis clone WS02764_N06... 41 0.082
AP010904_3967(AP010904|pid:none) Desulfovibrio magneticus RS-1 D... 41 0.082
AY585944_1(AY585944|pid:none) Paxillus filamentosus strain Pf01D... 41 0.082
CP000471_3040(CP000471|pid:none) Magnetococcus sp. MC-1, complet... 41 0.082
AC135460_19(AC135460|pid:none) Oryza sativa (japonica cultivar-g... 41 0.11
CP000153_512(CP000153|pid:none) Sulfurimonas denitrificans DSM 1... 40 0.14
EU196734_1(EU196734|pid:none) Drosophila buzzatii Hsp26 (hsp26),... 40 0.14
AY329066_1(AY329066|pid:none) Nicotiana tabacum clone pHSM4 cyto... 40 0.14
FN392323_33(FN392323|pid:none) Pichia pastoris GS115 contig34, w... 40 0.14
CU466930_105(CU466930|pid:none) Candidatus Cloacamonas acidamino... 40 0.18
AM444460_1(AM444460|pid:none) Vitis vinifera contig VV78X244330.... 40 0.18
(P19243) RecName: Full=18.1 kDa class I heat shock protein; AltN... 40 0.18
CP000085_919(CP000085|pid:none) Burkholderia thailandensis E264 ... 40 0.18
AY566827_1(AY566827|pid:none) Uncultured soil bacterium clone CR... 40 0.24
DQ515777_1(DQ515777|pid:none) Agave tequilana clone 5.4 chaperon... 40 0.24
AY329046_1(AY329046|pid:none) Nicotiana tabacum clone pHS21 cyto... 40 0.24
AP007155_18(AP007155|pid:none) Aspergillus oryzae RIB40 genomic ... 40 0.24
DQ515784_1(DQ515784|pid:none) Agave tequilana clone 7.7 chaperon... 40 0.24
BT033664_1(BT033664|pid:none) Zea mays full-length cDNA clone ZM... 40 0.24
(P30693) RecName: Full=17.6 kDa class I heat shock protein; &S2... 40 0.24
CP000361_2213(CP000361|pid:none) Arcobacter butzleri RM4018, com... 40 0.24
DQ515774_1(DQ515774|pid:none) Agave tequilana clone 1.1 chaperon... 40 0.24
AY329050_1(AY329050|pid:none) Nicotiana tabacum clone pHS22 cyto... 40 0.24
AL844509_45(AL844509|pid:none) Plasmodium falciparum 3D7 chromos... 40 0.24
AF166277_1(AF166277|pid:none) Nicotiana tabacum low molecular we... 39 0.31
T03958(T03958) heat shock protein 18p - common tobacco &X70688_... 39 0.31
AF475907_1(AF475907|pid:none) Exophiala dermatitidis HSP30 (hsp3... 39 0.31
CP000127_2629(CP000127|pid:none) Nitrosococcus oceani ATCC 19707... 39 0.31
CP000927_2846(CP000927|pid:none) Caulobacter sp. K31, complete g... 39 0.31
AF123256_1(AF123256|pid:none) Lycopersicon esculentum 17.8 kD cl... 39 0.31
AY329052_1(AY329052|pid:none) Nicotiana tabacum clone pHS20 cyto... 39 0.31
CP000480_3798(CP000480|pid:none) Mycobacterium smegmatis str. MC... 39 0.31
CP000109_2019(CP000109|pid:none) Thiomicrospira crunogena XCL-2,... 39 0.31
AY329053_1(AY329053|pid:none) Nicotiana tabacum clone pHS31 cyto... 39 0.31
(P02520) RecName: Full=Class I heat shock protein; Flags: Fragme... 39 0.31
AY329063_1(AY329063|pid:none) Nicotiana tabacum clone pHS1J cyto... 39 0.31
EU325986_1(EU325986|pid:none) Oryza sativa Japonica Group cultiv... 39 0.31
FJ688371_1(FJ688371|pid:none) Agaricus bisporus small heat shock... 39 0.31
DQ515776_1(DQ515776|pid:none) Agave tequilana clone 2.34 chapero... 39 0.31
(Q84Q77) RecName: Full=17.4 kDa class I heat shock protein 3; &... 39 0.31
AF410266_1(AF410266|pid:none) Arabidopsis thaliana AT3g46230/F12... 39 0.41
AF123255_1(AF123255|pid:none) Lycopersicon esculentum 17.7 kD cl... 39 0.41
(P19036) RecName: Full=17.4 kDa class I heat shock protein; AltN... 39 0.41
FJ874762_1(FJ874762|pid:none) Fusarium lichenicola culture-colle... 39 0.41
(P30221) RecName: Full=17.8 kDa class I heat shock protein; &S1... 39 0.41
CP000386_995(CP000386|pid:none) Rubrobacter xylanophilus DSM 994... 39 0.41
AE016828_1000(AE016828|pid:none) Coxiella burnetii RSA 493, comp... 39 0.41
S72544(S72544) heat shock protein 17.9 - pearl millet &X94193_1... 39 0.41
AF089842_1(AF089842|pid:none) Funaria hygrometrica cytosolic I s... 39 0.41
GQ121016_1(GQ121016|pid:none) Pennisetum glaucum heat shock prot... 39 0.41
AM460735_2(AM460735|pid:none) Vitis vinifera contig VV78X106674.... 39 0.41
AP004886_4(AP004886|pid:none) Oryza sativa Japonica Group genomi... 39 0.41
(P29830) RecName: Full=17.6 kDa class II heat shock protein; &A... 39 0.41
AJ000691_1(AJ000691|pid:none) Quercus suber mRNA for a 17.4 kD c... 39 0.41
EF083123_1(EF083123|pid:none) Picea sitchensis clone WS02723_H20... 39 0.41
AF498649_1(AF498649|pid:none) Entamoeba histolytica small heat s... 39 0.53
AM478886_4(AM478886|pid:none) Vitis vinifera contig VV78X038291.... 39 0.53
EU636239_1(EU636239|pid:none) Malus x domestica cultivar Fuji he... 39 0.53
CU234118_4423(CU234118|pid:none) Bradyrhizobium sp. ORS278,compl... 39 0.53
AY261672_1(AY261672|pid:none) Citrus x paradisi HSP19 class I mR... 39 0.53
AF022217_1(AF022217|pid:none) Brassica rapa low molecular weight... 39 0.53
(P27880) RecName: Full=18.2 kDa class I heat shock protein; &S1... 39 0.53
CP001108_1923(CP001108|pid:none) Prosthecochloris aestuarii DSM ... 39 0.53
AM910996_30(AM910996|pid:none) Plasmodium knowlesi strain H chro... 39 0.53
AE006470_636(AE006470|pid:none) Chlorobium tepidum TLS, complete... 39 0.53
AE017180_2663(AE017180|pid:none) Geobacter sulfurreducens PCA, c... 38 0.69
(P04795) RecName: Full=17.6 kDa class I heat shock protein; AltN... 38 0.69
AJ243565_1(AJ243565|pid:none) Brassica oleracea hsp17.7-a gene f... 38 0.69
DQ515781_1(DQ515781|pid:none) Agave tequilana clone 6.26 chapero... 38 0.69
AM494966_242(AM494966|pid:none) Leishmania braziliensis chromoso... 38 0.69
AM458555_2(AM458555|pid:none) Vitis vinifera contig VV78X268477.... 38 0.69
(P02516) RecName: Full=Heat shock protein 23; &AE014296_1735(AE... 38 0.69
DQ296046_1(DQ296046|pid:none) Arachis hypogaea 17.5 kDa class I ... 38 0.69
HHFF23(A02919)heat shock protein 23 - fruit fly (Drosophila mela... 38 0.69
BT053262_1(BT053262|pid:none) Medicago truncatula clone MTYFP_FQ... 38 0.69
CP000830_2780(CP000830|pid:none) Dinoroseobacter shibae DFL 12, ... 38 0.69
(O82011) RecName: Full=17.7 kDa class I heat shock protein; AltN... 38 0.69
BX842648_169(BX842648|pid:none) Bdellovibrio bacteriovorus compl... 38 0.69
CP000473_6996(CP000473|pid:none) Solibacter usitatus Ellin6076, ... 38 0.69
DQ515772_1(DQ515772|pid:none) Agave tequilana clone 1.8 chaperon... 38 0.90
AJ306557_1(AJ306557|pid:none) Helianthus annuus hsp17.6a gene fo... 38 0.90
AM236080_1890(AM236080|pid:none) Rhizobium leguminosarum bv. vic... 38 0.90
EF583934_1(EF583934|pid:none) Viola baoshanensis weight heat str... 38 0.90
AM712297_1(AM712297|pid:none) Leishmania amazonensis hsp20 gene ... 38 0.90
AC149642_20(AC149642|pid:none) Medicago truncatula chromosome 2 ... 38 0.90
EU223832_1(EU223832|pid:none) Gossypium hirsutum low molecular w... 38 0.90
CP001322_2320(CP001322|pid:none) Desulfatibacillum alkenivorans ... 38 0.90
AY329067_1(AY329067|pid:none) Nicotiana tabacum clone pHS4C cyto... 38 0.90
CP001634_865(CP001634|pid:none) Kosmotoga olearia TBF 19.5.1, co... 38 0.90
AY329073_1(AY329073|pid:none) Nicotiana tabacum clone pHS4G cyto... 38 0.90
U63631_1(U63631|pid:none) Fragaria x ananassa LMW heat shock pro... 38 0.90
DQ532017_1(DQ532017|pid:none) Penicillium marneffei heat shock p... 38 0.90
CP001069_613(CP001069|pid:none) Ralstonia pickettii 12J chromoso... 38 0.90
(P40920) RecName: Full=30 kDa heat shock protein; &D32070_1(D32... 38 0.90
AM445304_1(AM445304|pid:none) Vitis vinifera contig VV78X239985.... 38 0.90
CP000159_1908(CP000159|pid:none) Salinibacter ruber DSM 13855, c... 38 0.90
(P04794) RecName: Full=17.5 kDa class I heat shock protein; AltN... 37 1.2
AC018748_15(AC018748|pid:none) Sequence of BAC T3F20 from Arabid... 37 1.2
AJ749949_1794(AJ749949|pid:none) Francisella tularensis subsp. t... 37 1.2
CP000390_2260(CP000390|pid:none) Mesorhizobium sp. BNC1, complet... 37 1.2
AM746676_4961(AM746676|pid:none) Sorangium cellulosum 'So ce 56'... 37 1.2
AM233362_1956(AM233362|pid:none) Francisella tularensis subsp. h... 37 1.2
CP000608_1623(CP000608|pid:none) Francisella tularensis subsp. t... 37 1.2
S71566(S71566;S71568) heat shock protein, 17.7K - common sunflow... 37 1.2
AJ306557_2(AJ306557|pid:none) Helianthus annuus hsp17.6a gene fo... 37 1.2
CP000027_924(CP000027|pid:none) Dehalococcoides ethenogenes 195,... 37 1.2
CP000943_3683(CP000943|pid:none) Methylobacterium sp. 4-46, comp... 37 1.2
EF514500_1(EF514500|pid:none) Vigna unguiculata 17.7 kDa class I... 37 1.2
AY117412_1(AY117412|pid:none) Laccaria bicolor small heat shock ... 37 1.2
AB367955_1(AB367955|pid:none) Brassica rapa subsp. chinensis BcH... 37 1.2
EU223835_1(EU223835|pid:none) Gossypium hirsutum low molecular w... 37 1.2
AJ237596_1(AJ237596|pid:none) Helianthus annuus mRNA for 17.9 kD... 37 1.2
CP000776_575(CP000776|pid:none) Campylobacter hominis ATCC BAA-3... 37 1.2
EF087711_1(EF087711|pid:none) Picea sitchensis clone WS02737_C15... 37 1.2
M33900_1(M33900|pid:none) Pisum sativum 17.9 kDa heat shock prot... 37 1.2
S15525(S15525) heat shock protein - carrot (fragment) &X53850_1... 37 1.2
CP000908_3454(CP000908|pid:none) Methylobacterium extorquens PA1... 37 1.5
AM450754_2(AM450754|pid:none) Vitis vinifera contig VV78X000784.... 37 1.5
DQ294615_1(DQ294615|pid:none) Arachis hypogaea 17.3 kDa class I ... 37 1.5
DQ393581_1(DQ393581|pid:none) Metarhizium anisopliae heat shock ... 37 1.5
AF507963_1(AF507963|pid:none) Ginkgo biloba putative class II sm... 37 1.5
CP000494_3315(CP000494|pid:none) Bradyrhizobium sp. BTAi1, compl... 37 1.5
EF520125_1(EF520125|pid:none) Ageratina adenophora class I low-m... 37 1.5
AF161179_1(AF161179|pid:none) Malus domestica low molecular weig... 37 1.5
CP000284_1163(CP000284|pid:none) Methylobacillus flagellatus KT,... 37 1.5
BT043438_1(BT043438|pid:none) Zea mays full-length cDNA clone ZM... 37 1.5
S71768(S71768) low molecular weight heat shock protein, 18.2K (c... 37 1.5
S71769(S71769) low molecular weight heat-shock protein, 18.2K (c... 37 1.5
CT573071_260(CT573071|pid:none) Kuenenia stuttgartiensis genome ... 37 1.5
CP000514_51(CP000514|pid:none) Marinobacter aquaeolei VT8, compl... 37 1.5
AY835930_1(AY835930|pid:none) Codonopsis lanceolata heat shock p... 37 1.5
(Q54I91) RecName: Full=Small heat shock protein hspI, mitochondr... 37 1.5
FJ827067_1(FJ827067|pid:none) Capsicum annuum var. annuum endopl... 37 1.5
BT069294_1(BT069294|pid:none) Zea mays full-length cDNA clone ZM... 37 1.5
AM450754_3(AM450754|pid:none) Vitis vinifera contig VV78X000784.... 37 1.5
AF343966_1(AF343966|pid:none) Coffea arabica low molecular weigh... 37 1.5
CP001298_3654(CP001298|pid:none) Methylobacterium chloromethanic... 37 1.5
AM502247_280(AM502247|pid:none) Leishmania infantum chromosome 29. 37 1.5
AM483837_3(AM483837|pid:none) Vitis vinifera contig VV78X249114.... 37 2.0
AF007762_1(AF007762|pid:none) Agrostis stolonifera var. palustri... 37 2.0
(P0A5B7) RecName: Full=14 kDa antigen; AltName: Full=16 kDa anti... 37 2.0
CP000270_1842(CP000270|pid:none) Burkholderia xenovorans LB400 c... 37 2.0
CP000148_2604(CP000148|pid:none) Geobacter metallireducens GS-15... 37 2.0
CP000159_2274(CP000159|pid:none) Salinibacter ruber DSM 13855, c... 37 2.0
AM483837_2(AM483837|pid:none) Vitis vinifera contig VV78X249114.... 37 2.0
EF087632_1(EF087632|pid:none) Picea sitchensis clone WS02731_E17... 37 2.0
EF086474_1(EF086474|pid:none) Picea sitchensis clone WS02817_N22... 37 2.0
CP000769_3300(CP000769|pid:none) Anaeromyxobacter sp. Fw109-5, c... 37 2.0
EF105483_1(EF105483|pid:none) Ageratina adenophora 17.7 KD class... 37 2.0
AY650281_1(AY650281|pid:none) Toxoplasma gondii heat shock prote... 37 2.0
AM445422_1(AM445422|pid:none) Vitis vinifera contig VV78X249114.... 37 2.0
AE017221_1251(AE017221|pid:none) Thermus thermophilus HB27, comp... 37 2.0
AK071240_1(AK071240|pid:none) Oryza sativa Japonica Group cDNA c... 37 2.0
EF086296_1(EF086296|pid:none) Picea sitchensis clone WS02921_H10... 37 2.0
AM425978_1(AM425978|pid:none) Vitis vinifera contig VV78X263739.... 37 2.0
CP000252_51(CP000252|pid:none) Syntrophus aciditrophicus SB, com... 37 2.0
(P27397) RecName: Full=18.0 kDa class I heat shock protein; AltN... 37 2.0
AC022464_25(AC022464|pid:none) Genomic sequence for Arabidopsis ... 36 2.6
AB047592_1(AB047592|pid:none) Trichophyton mentagrophytes mRNA f... 36 2.6
L47740_1(L47740|pid:none) Picea glauca class II cytoplasmic smal... 36 2.6
(Q05832) RecName: Full=18.3 kDa class I heat shock protein; AltN... 36 2.6
BT043135_1(BT043135|pid:none) Zea mays full-length cDNA clone ZM... 36 2.6
AM458552_1(AM458552|pid:none) Vitis vinifera contig VV78X180531.... 36 2.6
BT033792_1(BT033792|pid:none) Zea mays full-length cDNA clone ZM... 36 2.6
AM431949_1(AM431949|pid:none) Vitis vinifera contig VV78X111726.... 36 2.6
CP000423_661(CP000423|pid:none) Lactobacillus casei ATCC 334, co... 36 2.6
AE006470_1943(AE006470|pid:none) Chlorobium tepidum TLS, complet... 36 2.6
EU960295_1(EU960295|pid:none) Zea mays clone 223266 unknown mRNA. 36 2.6
T12080(T12080) low molecular weight heat shock protein 17-19 cla... 36 2.6
T04171(T04171) heat shock protein - rice &U81385_1(U81385|pid:n... 36 3.4
CP000142_395(CP000142|pid:none) Pelobacter carbinolicus DSM 2380... 36 3.4
CP000478_2342(CP000478|pid:none) Syntrophobacter fumaroxidans MP... 36 3.4
BT071608_1(BT071608|pid:none) Picea sitchensis clone WS02929_H13... 36 3.4
EF492881_1(EF492881|pid:none) Cyclamen persicum small heat shock... 36 3.4
CP000686_1875(CP000686|pid:none) Roseiflexus sp. RS-1, complete ... 36 3.4
AP010904_1146(AP010904|pid:none) Desulfovibrio magneticus RS-1 D... 36 3.4
EF083360_1(EF083360|pid:none) Picea sitchensis clone WS02910_N23... 36 3.4
EF053229_1(EF053229|pid:none) Rosa chinensis heat shock protein ... 36 3.4
AP010904_1145(AP010904|pid:none) Desulfovibrio magneticus RS-1 D... 36 3.4
AY387588_1(AY387588|pid:none) Carica papaya 17.5 kDa class I hea... 36 3.4
CP000271_626(CP000271|pid:none) Burkholderia xenovorans LB400 ch... 36 3.4
AB018107_13(AB018107|pid:none) Arabidopsis thaliana genomic DNA,... 36 3.4
EF085878_1(EF085878|pid:none) Picea sitchensis clone WS02812_P14... 36 3.4
EU162609_30(EU162609|pid:none) Cleome spinosa clone contig83 BAC... 35 4.5
EU780018_1(EU780018|pid:none) Fucus serratus isolate Fse_00558 h... 35 4.5
AE017221_1114(AE017221|pid:none) Thermus thermophilus HB27, comp... 35 4.5
BX571965_1336(BX571965|pid:none) Burkholderia pseudomallei strai... 35 4.5
T05740(T05740) heat shock protein 18 - barley &X64561_1(X64561|... 35 4.5
CP001124_598(CP001124|pid:none) Geobacter bemidjiensis Bem, comp... 35 4.5
CT573071_1754(CT573071|pid:none) Kuenenia stuttgartiensis genome... 35 4.5
CU633458_17(CU633458|pid:none) Podospora anserina genomic DNA ch... 35 4.5
AF096373_5(AF096373|pid:none) Arabidopsis thaliana BAC T9A4. &A... 35 4.5
CP000526_1225(CP000526|pid:none) Burkholderia mallei SAVP1 chrom... 35 4.5
AP009385_1165(AP009385|pid:none) Burkholderia multivorans ATCC 1... 35 4.5
CP000116_2312(CP000116|pid:none) Thiobacillus denitrificans ATCC... 35 4.5
AE017282_2403(AE017282|pid:none) Methylococcus capsulatus str. B... 35 4.5
CP001638_1849(CP001638|pid:none) Geobacillus sp. WCH70, complete... 35 4.5
CP000388_3551(CP000388|pid:none) Pseudoalteromonas atlantica T6c... 35 4.5
(Q943E7) RecName: Full=16.9 kDa class I heat shock protein 3; &... 35 4.5
(Q06823) RecName: Full=Spore protein SP21; &A49942(A49942;S2766... 35 4.5
EU964864_1(EU964864|pid:none) Zea mays clone 282177 17.5 kDa cla... 35 5.9
(P24632) RecName: Full=17.8 kDa class II heat shock protein; &B... 35 5.9
CP000159_2301(CP000159|pid:none) Salinibacter ruber DSM 13855, c... 35 5.9
CP000518_1093(CP000518|pid:none) Mycobacterium sp. KMS, complete... 35 5.9
BT066200_1(BT066200|pid:none) Zea mays full-length cDNA clone ZM... 35 5.9
(P12810) RecName: Full=16.9 kDa class I heat shock protein; AltN... 35 5.9
CP001130_730(CP001130|pid:none) Hydrogenobaculum sp. Y04AAS1, co... 35 5.9
AM483837_1(AM483837|pid:none) Vitis vinifera contig VV78X249114.... 35 5.9
BT070148_1(BT070148|pid:none) Zea mays full-length cDNA clone ZM... 35 5.9
S65050(S65050) low molecular weight heat shock protein precursor... 35 5.9
CP001099_253(CP001099|pid:none) Chlorobaculum parvum NCIB 8327, ... 35 5.9
AM709750_1(AM709750|pid:none) Aegilops kotschyi mRNA for 17.0 kD... 35 5.9
AM709751_1(AM709751|pid:none) Triticum turgidum subsp. dicoccoid... 35 5.9
EU196734_3(EU196734|pid:none) Drosophila buzzatii Hsp26 (hsp26),... 35 5.9
CYPZ77(S14999;S18260)heat shock protein (clone DChsp17.7) - carrot 35 5.9
CP000769_4457(CP000769|pid:none) Anaeromyxobacter sp. Fw109-5, c... 35 5.9
CP000975_1827(CP000975|pid:none) Methylacidiphilum infernorum V4... 35 5.9
CT573073_923(CT573073|pid:none) Kuenenia stuttgartiensis genome ... 35 5.9
CP001132_1319(CP001132|pid:none) Acidithiobacillus ferrooxidans ... 35 5.9
AM709758_1(AM709758|pid:none) Triticum monococcum mRNA for 16.9b... 35 5.9
AM709746_1(AM709746|pid:none) Aegilops longissima mRNA for 16.9 ... 35 5.9
CP000252_53(CP000252|pid:none) Syntrophus aciditrophicus SB, com... 35 5.9
CP001230_270(CP001230|pid:none) Persephonella marina EX-H1, comp... 35 5.9
CP001146_1382(CP001146|pid:none) Dictyoglomus thermophilum H-6-1... 35 5.9
CP000359_501(CP000359|pid:none) Deinococcus geothermalis DSM 113... 35 5.9
CP000089_628(CP000089|pid:none) Dechloromonas aromatica RCB, com... 35 5.9
CP001251_1492(CP001251|pid:none) Dictyoglomus turgidum DSM 6724,... 35 5.9
AM709745_1(AM709745|pid:none) Aegilops longissima mRNA for 16.5 ... 35 5.9
EU952685_1(EU952685|pid:none) Zea mays clone 1286326 16.9 kDa cl... 35 7.7
AE000782_1945(AE000782|pid:none) Archaeoglobus fulgidus DSM 4304... 35 7.7
AM709749_1(AM709749|pid:none) Aegilops kotschyi mRNA for 16.9 kD... 35 7.7
AY692975_1(AY692975|pid:none) Saccharomyces cerevisiae clone FLH... 35 7.7
EU959214_1(EU959214|pid:none) Zea mays clone 212187 16.9 kDa cla... 35 7.7
AE015451_3207(AE015451|pid:none) Pseudomonas putida KT2440 compl... 35 7.7
EF087595_1(EF087595|pid:none) Picea sitchensis clone WS0271_E07 ... 35 7.7
AP004996_6(AP004996|pid:none) Oryza sativa Japonica Group genomi... 35 7.7
(P15992) RecName: Full=Heat shock protein 26; AltName: Full=26 k... 35 7.7
AM746676_577(AM746676|pid:none) Sorangium cellulosum 'So ce 56' ... 35 7.7
AM709771_1(AM709771|pid:none) Triticum monococcum mRNA for 15.7 ... 35 7.7
BT064307_1(BT064307|pid:none) Zea mays full-length cDNA clone ZM... 35 7.7
AM709768_1(AM709768|pid:none) Triticum turgidum subsp. durum mRN... 35 7.7
CU207366_2268(CU207366|pid:none) Gramella forsetii KT0803 comple... 35 7.7
AJ971357_1(AJ971357|pid:none) Triticum turgidum subsp. dicoccoid... 35 7.7
CU928173_563(CU928173|pid:none) Zygosaccharomyces rouxii strain ... 35 7.7
CT573072_866(CT573072|pid:none) Kuenenia stuttgartiensis genome ... 35 7.7
EU962943_1(EU962943|pid:none) Zea mays clone 246756 16.9 kDa cla... 35 7.7
EF087388_1(EF087388|pid:none) Picea sitchensis clone WS02750_N15... 35 7.7
CP000454_2099(CP000454|pid:none) Arthrobacter sp. FB24, complete... 35 7.7
AJ971355_1(AJ971355|pid:none) Aegilops longissima mRNA for 17.5... 35 7.7
AC144564_10(AC144564|pid:none) Medicago truncatula clone mth2-17... 35 7.7
AM458552_4(AM458552|pid:none) Vitis vinifera contig VV78X180531.... 35 7.7
AB333795_1(AB333795|pid:none) Glycine max mRNA for peroxisomal s... 35 7.7
CP000356_386(CP000356|pid:none) Sphingopyxis alaskensis RB2256, ... 35 7.7
DQ515779_1(DQ515779|pid:none) Agave tequilana clone 6.18 chapero... 35 7.7
AJ971358_1(AJ971358|pid:none) Triticum turgidum subsp. dicoccum ... 35 7.7
CP001029_3813(CP001029|pid:none) Methylobacterium populi BJ001, ... 35 7.7
AC004561_11(AC004561|pid:none) Arabidopsis thaliana chromosome 2... 35 7.7
EF082142_1(EF082142|pid:none) Picea sitchensis clone WS0282_L20 ... 35 7.7
AM709769_1(AM709769|pid:none) Triticum monococcum mRNA for 14.5 ... 35 7.7
CP001349_2278(CP001349|pid:none) Methylobacterium nodulans ORS 2... 35 7.7
AE017180_535(AE017180|pid:none) Geobacter sulfurreducens PCA, co... 35 7.7
HHFF26(A02920)heat shock protein 26 - fruit fly (Drosophila mela... 35 7.7
>JC4377(JC4377) low-molecular-weight heat-shock protein - rice
&U83670_1(U83670|pid:none)
Length = 160
Score = 44.3 bits (103), Expect = 0.010
Identities = 17/42 (40%), Positives = 30/42 (71%)
Frame = +3
Query: 900 GKFIRSYKLPPGTDSSKIKATMDDGLLEIIIPKDTPSEDRLK 1025
GKF+R ++LP T +IKA+M++G+L + +PK+ P + +K
Sbjct: 113 GKFLRRFRLPENTKPEQIKASMENGVLTVTVPKEEPKKPDVK 154
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3236559
Number of Hits to DB: 1,030,603,097
Number of extensions: 11599699
Number of successful extensions: 27606
Number of sequences better than 10.0: 275
Number of HSP's gapped: 27601
Number of HSP's successfully gapped: 275
Length of query: 429
Length of database: 1,051,180,864
Length adjustment: 131
Effective length of query: 298
Effective length of database: 627,191,635
Effective search space: 186903107230
Effective search space used: 186903107230
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)
|
| PSORT |
|
| VS (DIR, S) |
5 |
| VH (FL, L) |
0 |
| VF (FL, S) |
0 |
| AH (FL, L) |
0 |
| AF (FL, S) |
0 |
| SL (DIR, L) |
0 |
| SS (DIR, S) |
2 |
| SH (FL, L) |
0 |
| SF (FL, S) |
0 |
| CH (FL, L) |
1 |
| CF (FL, S) |
0 |
| FCL (DIR, L) |
0 |
| FC (DIR, S) |
1 |
| FC-IC (SUB) |
0 |