Contig-U15076-1 |
Contig ID |
Contig-U15076-1 |
Contig update |
2004. 6.11 |
Contig sequence |
|
Gap |
no gap |
Contig length |
1114 |
Chromosome number (1..6, M) |
4 |
Chromosome length |
5430582 |
Start point |
1614151 |
End point |
1613055 |
Strand (PLUS/MINUS) |
MINUS |
Number of clones |
19 |
Number of EST |
18 |
Link to clone list |
U15076 |
List of clone(s) |
|
Translated Amino Acid sequence |
|
Translated Amino Acid sequence (All Frames) |
|
own update |
2004. 6.23 |
Homology vs CSM-cDNA |
|
dna update |
2009. 1.11 |
Homology vs DNA |
Query= Contig-U15076-1 (Contig-U15076-1Q) /CSM_Contig/Contig-U15076-1Q.Seq.d (1114 letters)
Database: ddbj_A 92,845,959 sequences; 95,242,211,685 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value N
(AU061083) Dictyostelium discoideum slug cDNA, clone SLC877. 1092 0.0 2 (C24339) Dictyostelium discoideum gamete cDNA, clone FC-AT20. 1092 0.0 2 (AU284439) Dictyostelium discoideum gamete cDNA clone:FC-AV1... 779 0.0 1 (AU034439) Dictyostelium discoideum slug cDNA, clone SLC877. 779 0.0 1 (AU033485) Dictyostelium discoideum slug cDNA, clone SLA882. 779 0.0 1 (C91284) Dictyostelium discoideum slug cDNA, clone SSJ747. 779 0.0 1 (AU284703) Dictyostelium discoideum gamete cDNA clone:FC-BH2... 553 0.0 2 (BJ435602) Dictyostelium discoideum cDNA clone:ddv27k16, 3' ... 686 0.0 2 (AU053927) Dictyostelium discoideum slug cDNA, clone SLK178. 650 0.0 1 (AU268787) Dictyostelium discoideum vegetative cDNA clone:VS... 575 e-168 2 (AU266170) Dictyostelium discoideum vegetative cDNA clone:VS... 573 e-159 1 (AU271335) Dictyostelium discoideum gamete cDNA clone:FC-IC0... 438 e-118 1 (AU074189) Dictyostelium discoideum slug cDNA, clone SSJ747. 383 e-109 2 (AU039733) Dictyostelium discoideum slug cDNA, clone SLG283. 379 e-100 1 (AU073200) Dictyostelium discoideum slug cDNA, clone SSG358. 355 2e-93 1 (BJ435909) Dictyostelium discoideum cDNA clone:ddv28m20, 3' ... 339 1e-88 1 (AU061973) Dictyostelium discoideum slug cDNA, clone SLG830. 289 1e-73 1 (BJ433625) Dictyostelium discoideum cDNA clone:ddv22o07, 3' ... 278 4e-70 1 (BJ415981) Dictyostelium discoideum cDNA clone:ddv24m11, 5' ... 161 2e-54 2 (BJ364701) Dictyostelium discoideum cDNA clone:ddc32k15, 5' ... 115 2e-34 2 (EC762071) PSE00007779 rw_mgpallid Polysphondylium pallidum ... 54 0.012 1 (EC761471) PSE00008288 rw_mgpallid Polysphondylium pallidum ... 54 0.012 1 (EC761439) PSE00002017 rw_mgpallid Polysphondylium pallidum ... 54 0.012 1 (EC760901) PSE00007808 rw_mgpallid Polysphondylium pallidum ... 54 0.012 1 (EC760819) PSE00004614 rw_mgpallid Polysphondylium pallidum ... 54 0.012 1 (EC744739) PSE00002532 rw_mgpallid Polysphondylium pallidum ... 54 0.012 1 (CE728091) tigr-gss-dog-17000315440555 Dog Library Canis lup... 30 0.014 4 (CV162046) CS_gil_50D11_M13Reverse Blue crab gill, normalize... 36 0.14 2 (AL732613) Mouse DNA sequence from clone RP23-193A21 on chro... 50 0.18 1 (CQ589139) Sequence 16897 from Patent WO0171042. 50 0.18 1 (AR509127) Sequence 14087 from patent US 6703491. 50 0.18 1 (AM494955) Leishmania braziliensis chromosome 18. 50 0.18 1 (AE014298) Drosophila melanogaster chromosome X, complete se... 50 0.18 1 (AC023729) Drosophila melanogaster X BAC RP98-39L4 (Roswell ... 50 0.18 1 (AC023719) Drosophila melanogaster X BAC RP98-4L24 (Roswell ... 50 0.18 1 (AC114701) Rattus norvegicus clone CH230-312O22, WORKING DRA... 50 0.18 1 (AC097592) Rattus norvegicus clone CH230-184O20, *** SEQUENC... 50 0.18 1 (BX294664) Mouse DNA sequence *** SEQUENCING CANCELLED *** f... 50 0.18 1 (AC013068) Drosophila melanogaster, *** SEQUENCING IN PROGRE... 50 0.18 1 (EC261105) 524934 MN08 Drosophila melanogaster cDNA clone 29... 50 0.18 1 (CT025589) Mouse DNA sequence from clone RP24-149O16 on chro... 38 0.40 2 (AC154403) Mus musculus BAC clone RP24-239F20 from chromosom... 38 0.41 2 (AC122162) Medicago truncatula clone mth2-16g15, complete se... 38 0.41 2 (AC180265) Strongylocentrotus purpuratus clone R3-3123H21, W... 48 0.42 3 (CF965657) 9996siced_4304.z1 Oryza sativa cv. LYP9 trefoil w... 34 0.53 2 (X68878) R.norvegicus mRNA + insert for assembly protein 180... 48 0.72 1 (X68877) R.norvegicus mRNA for assembly protein 180 (AP180). 48 0.72 1 (M83985) Mouse phosphoprotein (F1-20) mRNA, complete cds. 48 0.72 1 (BX255878) Mouse DNA sequence from clone RP23-444O21 on chro... 48 0.72 1 (BC052454) Mus musculus synaptosomal-associated protein 91, ... 48 0.72 1 (BC031773) Mus musculus synaptosomal-associated protein 91, ... 48 0.72 1 (AB093255) Mus musculus mRNA for mKIAA0656 protein. 48 0.72 1 (AM463736) Vitis vinifera, whole genome shotgun sequence, co... 48 0.72 1 (BD317268) Identification and Use of Molecules Implicated in... 48 0.72 1 (AX694348) Sequence 28 from Patent EP1281775. 48 0.72 1 (AC005248) Homo sapiens BAC clone GS1-83B20 from 7, complete... 48 0.72 1 (AC102079) Mus musculus clone RP23-444O21, WORKING DRAFT SEQ... 48 0.72 1 (AC177781) Strongylocentrotus purpuratus clone R3-1002J1, WO... 48 0.72 1 (AK147087) Mus musculus cDNA, RIKEN full-length enriched lib... 48 0.72 1 (FH645459) CHO_OF4982xb21r1.ab1 CHO_OF4 Nicotiana tabacum ge... 48 0.72 1 (FH359983) CHO_OF4688xc14r1.ab1 CHO_OF4 Nicotiana tabacum ge... 48 0.72 1 (FH326535) CHO_OF4558xp09r1.ab1 CHO_OF4 Nicotiana tabacum ge... 48 0.72 1 (FH158015) CHO_OF3132xd05r1.ab1 CHO_OF3 Nicotiana tabacum ge... 48 0.72 1 (ET816709) CHO_OF776xa22r1.ab1 CHO_OF Nicotiana tabacum geno... 48 0.72 1 (CR178970) Forward strand read from insert in 5'HPRT inserti... 48 0.72 1 (BU847532) AGENCOURT_10320825 NIH_MGC_144 Mus musculus cDNA ... 48 0.72 1 (BQ769071) UI-M-FC0-byn-o-17-0-UI.r1 NIH_BMAP_FC0 Mus muscul... 48 0.72 1 (BM937379) UI-M-BH4-azi-g-12-0-UI.r1 NIH_BMAP_M_S5 Mus muscu... 48 0.72 1 (FE752718) CAYF2492.b1 CAYF Petrolisthes cinctipes heart, wh... 48 0.72 1 (AC173959) Glycine max clone gmw1-27d20, WORKING DRAFT SEQUE... 46 0.93 4 (BK004048) TPA_exp: Rattus norvegicus type I keratin KA11 (K... 40 1.1 3 (AM502236) Leishmania infantum chromosome 18. 36 1.3 2 (AC175229) Atelerix albiventris clone LB4-96D8, WORKING DRAF... 36 1.5 2 (AC180528) Strongylocentrotus purpuratus clone R3-3016G12, W... 36 1.5 2 (AC181508) Strongylocentrotus purpuratus clone R3-59H20, WOR... 34 1.5 2 (BM109778) EST557314 potato roots Solanum tuberosum cDNA clo... 32 1.7 3 (AC068917) Homo sapiens chromosome 5 clone RP11-313B16, WORK... 36 1.7 6 (AM783654) Nicotiana tabacum EST, clone nt002019016. 40 1.7 2 (EC184637) SOE00004873 Scenedesmus obliquus Large regular Sc... 36 1.9 2 (EW794507) G893P523RD14.T0 Ixodes scapularis Pooled Non-infe... 32 1.9 2 (AC008331) Drosophila melanogaster, chromosome 2L, region 29... 42 2.0 6 (AC224417) Bos taurus clone CH240-485J11, WORKING DRAFT SEQU... 38 2.5 5 (FE814082) CCAG31489.b1 CCAG Petrolisthes cinctipes heart, g... 42 2.6 2 (CU463259) Zebrafish DNA sequence from clone DKEY-5E5 in lin... 46 2.8 1 (AC155848) Mus musculus 6 BAC RP24-534P19 (Roswell Park Canc... 46 2.8 1 (AM502249) Leishmania infantum chromosome 31. 46 2.8 1 (AC140963) Bos taurus clone RP42-525L10, WORKING DRAFT SEQUE... 46 2.8 1 (AC140962) Bos taurus clone RP42-329O16, WORKING DRAFT SEQUE... 46 2.8 1 (CT573352) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 46 2.8 1 (BX936444) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 46 2.8 1 (AC224249) Bos taurus clone CH240-445J2, WORKING DRAFT SEQUE... 46 2.8 1 (AC222443) Bos taurus clone CH240-418F16, WORKING DRAFT SEQU... 46 2.8 1 (AC218381) Bos taurus clone CH240-284O16, WORKING DRAFT SEQU... 46 2.8 1 (AC212781) Pongo abelii chromosome UNKNOWN clone CH276-399G2... 46 2.8 1 (AC211708) Pongo abelii chromosome UNKNOWN clone CH276-364F1... 46 2.8 1 (AC210856) Pongo abelii chromosome UNKNOWN clone CH276-103D2... 46 2.8 1 (FH625976) CHO_OF4546xl08r1.ab1 CHO_OF4 Nicotiana tabacum ge... 46 2.8 1 (FH621452) CHO_OF4600xa14f1.ab1 CHO_OF4 Nicotiana tabacum ge... 46 2.8 1 (AM670820) Entamoeba terrapinae GSS, clone terra175d05.p1k. 46 2.8 1 (DX980117) SBA007_N01.r Sugar beet BAC library USH20 (Code S... 46 2.8 1
>(AU061083) Dictyostelium discoideum slug cDNA, clone SLC877. Length = 630
Score = 1092 bits (551), Expect(2) = 0.0 Identities = 551/551 (100%) Strand = Plus / Plus
Query: 82 atttcccttccctcatttctagacaatttatagaaagaaaaagtcatgtctgctccatcc 141 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 51 atttcccttccctcatttctagacaatttatagaaagaaaaagtcatgtctgctccatcc 110
Query: 142 gaaaccaccatcaccaccccaactactccagcccacagaatttttgttggtaacttaact 201 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111 gaaaccaccatcaccaccccaactactccagcccacagaatttttgttggtaacttaact 170
Query: 202 gaaaatgttgaatcctcaactttagaaactgcttttgctgaattcggtaaagttttaagt 261 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 171 gaaaatgttgaatcctcaactttagaaactgcttttgctgaattcggtaaagttttaagt 230
Query: 262 gttagaatcattaaaaagaagttcaagagtaacacttttggtttcgttgatatggaagat 321 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 231 gttagaatcattaaaaagaagttcaagagtaacacttttggtttcgttgatatggaagat 290
Query: 322 ttagaaactgccaataaagctgttgccgccatcaatggtagagaattcgacggtaaacaa 381 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 291 ttagaaactgccaataaagctgttgccgccatcaatggtagagaattcgacggtaaacaa 350
Query: 382 gtcaatgttgaaatcgctcgtgaaaagagtaccgaaagcaaaccaaagagaacttcaacc 441 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 351 gtcaatgttgaaatcgctcgtgaaaagagtaccgaaagcaaaccaaagagaacttcaacc 410
Query: 442 agaaagactagaacaccaaaaccaaccagcaccaccactggcgaaaatgctactactgaa 501 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 411 agaaagactagaacaccaaaaccaaccagcaccaccactggcgaaaatgctactactgaa 470
Query: 502 tccactgaagcatcaccaactttaaatggtaataccaccaccaaacgtagaaatgccaga 561 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 471 tccactgaagcatcaccaactttaaatggtaataccaccaccaaacgtagaaatgccaga 530
Query: 562 cgtaacaccaaagacgtcaaagctgccactaccaccaccaacaccgatgccaccaccaac 621 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 531 cgtaacaccaaagacgtcaaagctgccactaccaccaccaacaccgatgccaccaccaac 590
Query: 622 actgctgctgc 632 ||||||||||| Sbjct: 591 actgctgctgc 601
Score = 56.0 bits (28), Expect(2) = 0.0 Identities = 28/28 (100%) Strand = Plus / Plus
Query: 31 catacacatacatatttgtttaatataa 58 |||||||||||||||||||||||||||| Sbjct: 1 catacacatacatatttgtttaatataa 28
Score = 77.8 bits (39), Expect(2) = 3e-10 Identities = 39/39 (100%) Strand = Plus / Plus
Query: 626 ctgctgctgcctcaaccgccgctgctccagctaccaaaa 664 ||||||||||||||||||||||||||||||||||||||| Sbjct: 592 ctgctgctgcctcaaccgccgctgctccagctaccaaaa 630
Score = 26.3 bits (13), Expect(2) = 3e-10 Identities = 13/13 (100%) Strand = Plus / Plus
Query: 593 ccaccaccaacac 605 ||||||||||||| Sbjct: 580 ccaccaccaacac 592
Lambda K H 1.37 0.711 1.31
Matrix: blastn matrix:1 -3 Number of Sequences: 92845959 Number of Hits to DB: 1,152,901,606 Number of extensions: 73739475 Number of successful extensions: 7809113 Number of sequences better than 10.0: 157 Length of query: 1114 Length of database: 95,242,211,685 Length adjustment: 24 Effective length of query: 1090 Effective length of database: 97,308,875,965 Effective search space: 106066674801850 Effective search space used: 106066674801850 X1: 11 (21.8 bits) S2: 22 (44.1 bits)
|
protein update |
2009. 7.14 |
Homology vs Protein |
Query= Contig-U15076-1 (Contig-U15076-1Q) /CSM_Contig/Contig-U15076-1Q.Seq.d (1114 letters)
Database: nrp_B 3,236,559 sequences; 1,051,180,864 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
D31712_1(D31712|pid:none) Arabidopsis thaliana gene for RNA-bind... 65 4e-09 U08467_3(U08467|pid:none) Arabidopsis thaliana chloroplast RNA-b... 65 4e-09 (Q04836) RecName: Full=31 kDa ribonucleoprotein, chloroplastic; ... 65 4e-09 X57955_1(X57955|pid:none) S.oleracea mRNA for a 28kD RNA binding... 65 6e-09 AF255058_1(AF255058|pid:none) Pisum sativum 33 kDa ribonucleopro... 64 1e-08 EF147288_1(EF147288|pid:none) Populus trichocarpa clone WS0122_E... 63 2e-08 CP000884_3631(CP000884|pid:none) Delftia acidovorans SPH-1, comp... 63 2e-08 AE000520_352(AE000520|pid:none) Treponema pallidum subsp. pallid... 62 4e-08 CP001100_1585(CP001100|pid:none) Chloroherpeton thalassium ATCC ... 62 5e-08 CP001108_121(CP001108|pid:none) Prosthecochloris aestuarii DSM 2... 62 5e-08 CP000096_86(CP000096|pid:none) Pelodictyon luteolum DSM 273, com... 61 6e-08 CP001099_86(CP001099|pid:none) Chlorobaculum parvum NCIB 8327, c... 61 6e-08 FB912255_1(FB912255|pid:none) Sequence 131528 from Patent WO2008... 61 6e-08 FB912253_1(FB912253|pid:none) Sequence 131526 from Patent WO2008... 61 6e-08 AP006841_2720(AP006841|pid:none) Bacteroides fragilis YCH46 DNA,... 61 6e-08 BT085576_1(BT085576|pid:none) Zea mays full-length cDNA clone ZM... 61 8e-08 EU963124_1(EU963124|pid:none) Zea mays clone 257985 unknown mRNA. 60 1e-07 FB912277_1(FB912277|pid:none) Sequence 131550 from Patent WO2008... 60 1e-07 AF315811_1(AF315811|pid:none) Triticum aestivum RNA-binding prot... 60 1e-07 FB912193_1(FB912193|pid:none) Sequence 131466 from Patent WO2008... 60 1e-07 EF576487_1(EF576487|pid:none) Oryza sativa (indica cultivar-grou... 60 1e-07 BT043341_1(BT043341|pid:none) Zea mays full-length cDNA clone ZM... 60 1e-07 AP004339_10(AP004339|pid:none) Oryza sativa Japonica Group genom... 60 1e-07 EU960096_1(EU960096|pid:none) Zea mays clone 221668 ribonucleopr... 60 1e-07 FB912267_1(FB912267|pid:none) Sequence 131540 from Patent WO2008... 60 1e-07 BC003283_1(BC003283|pid:none) Mus musculus poly(A) binding prote... 60 1e-07 CP000096_993(CP000096|pid:none) Pelodictyon luteolum DSM 273, co... 60 1e-07 AL606917_1(AL606917|pid:none) Mouse DNA sequence from clone RP23... 60 1e-07 AK135962_1(AK135962|pid:none) Mus musculus in vitro fertilized e... 60 1e-07 AE006470_132(AE006470|pid:none) Chlorobium tepidum TLS, complete... 60 1e-07 AL606917_2(AL606917|pid:none) Mouse DNA sequence from clone RP23... 60 1e-07 AL606917_4(AL606917|pid:none) Mouse DNA sequence from clone RP23... 60 1e-07 FB912189_1(FB912189|pid:none) Sequence 131462 from Patent WO2008... 60 1e-07 AM451268_1(AM451268|pid:none) Vitis vinifera contig VV78X095284.... 60 2e-07 CP000108_1527(CP000108|pid:none) Chlorobium chlorochromatii CaD3... 59 2e-07 BC071591_1(BC071591|pid:none) Homo sapiens poly(A) binding prote... 59 2e-07 AL365277_14(AL365277|pid:none) Human DNA sequence from clone RP1... 59 2e-07 (Q13310) RecName: Full=Polyadenylate-binding protein 4; ... 59 2e-07 FB912191_1(FB912191|pid:none) Sequence 131464 from Patent WO2008... 59 2e-07 D12799_1(D12799|pid:none) Homo sapiens mRNA for polyadenylate bi... 59 2e-07 AB025351_1(AB025351|pid:none) Rana catesbeiana mRNA for BFCIRP, ... 59 2e-07 CP000383_2371(CP000383|pid:none) Cytophaga hutchinsonii ATCC 334... 59 3e-07 CP001110_1298(CP001110|pid:none) Pelodictyon phaeoclathratiforme... 59 3e-07 D31711_1(D31711|pid:none) Arabidopsis thaliana gene for RNA-bind... 59 4e-07 AP010656_534(AP010656|pid:none) Candidatus Azobacteroides pseudo... 59 4e-07 FB912259_1(FB912259|pid:none) Sequence 131532 from Patent WO2008... 59 4e-07 AK069121_1(AK069121|pid:none) Oryza sativa Japonica Group cDNA c... 59 4e-07 CP000140_908(CP000140|pid:none) Parabacteroides distasonis ATCC ... 59 4e-07 CP000361_59(CP000361|pid:none) Arcobacter butzleri RM4018, compl... 59 4e-07 (Q43349) RecName: Full=29 kDa ribonucleoprotein, chloroplastic; ... 59 4e-07 D31710_1(D31710|pid:none) Arabidopsis thaliana gene for RNA-bind... 59 4e-07 CP001108_1196(CP001108|pid:none) Prosthecochloris aestuarii DSM ... 59 4e-07 AE016819_340(AE016819|pid:none) Ashbya gossypii (= Eremothecium ... 59 4e-07 FB912185_1(FB912185|pid:none) Sequence 131458 from Patent WO2008... 58 5e-07 CT573072_196(CT573072|pid:none) Kuenenia stuttgartiensis genome ... 58 5e-07 CP000254_2375(CP000254|pid:none) Methanospirillum hungatei JF-1,... 58 5e-07 CP001110_1948(CP001110|pid:none) Pelodictyon phaeoclathratiforme... 58 5e-07 FB912279_1(FB912279|pid:none) Sequence 131552 from Patent WO2008... 58 5e-07 CP000539_2842(CP000539|pid:none) Acidovorax sp. JS42, complete g... 58 5e-07 FB912199_1(FB912199|pid:none) Sequence 131472 from Patent WO2008... 58 5e-07 BT053782_1(BT053782|pid:none) Zea mays full-length cDNA clone ZM... 58 7e-07 (P19682) RecName: Full=28 kDa ribonucleoprotein, chloroplastic; ... 58 7e-07 (P19683) RecName: Full=31 kDa ribonucleoprotein, chloroplastic; ... 58 7e-07 FM992688_16(FM992688|pid:none) Candida dubliniensis CD36 chromos... 58 7e-07 BX649404_2(BX649404|pid:none) Zebrafish DNA sequence from clone ... 57 9e-07 BT045197_1(BT045197|pid:none) Salmo salar clone ssal-rgf-514-254... 57 9e-07 AB085214_1(AB085214|pid:none) Hyla japonica cirp-beta mRNA for c... 57 9e-07 AJ421781_1(AJ421781|pid:none) Persea americana chloroplast mRNA ... 57 9e-07 BT073963_1(BT073963|pid:none) Oncorhynchus mykiss clone omyk-evo... 57 9e-07 BT049685_1(BT049685|pid:none) Salmo salar clone ssal-rgb2-559-08... 57 9e-07 BX649404_1(BX649404|pid:none) Zebrafish DNA sequence from clone ... 57 9e-07 DQ126684_1(DQ126684|pid:none) Gallus gallus aggrecan promoter bi... 57 1e-06 DQ215543_1(DQ215543|pid:none) Taeniopygia guttata clone 0058P006... 57 1e-06 (Q14011) RecName: Full=Cold-inducible RNA-binding protein; AltNa... 57 1e-06 AJ719636_1(AJ719636|pid:none) Gallus gallus mRNA for hypothetica... 57 1e-06 AB171494_1(AB171494|pid:none) Macaca fascicularis brain cDNA clo... 57 1e-06 BC102773_1(BC102773|pid:none) Bos taurus cold inducible RNA bind... 57 1e-06 AB306286_1(AB306286|pid:none) Alligator mississippiensis CIRBP m... 57 1e-06 CP001097_2035(CP001097|pid:none) Chlorobium limicola DSM 245, co... 57 1e-06 DQ215534_1(DQ215534|pid:none) Taeniopygia guttata clone 0063P001... 57 1e-06 DQ215533_1(DQ215533|pid:none) Taeniopygia guttata clone 0058P002... 57 1e-06 AB170797_1(AB170797|pid:none) Macaca fascicularis brain cDNA clo... 57 1e-06 AE017282_947(AE017282|pid:none) Methylococcus capsulatus str. Ba... 57 1e-06 AK304470_1(AK304470|pid:none) Homo sapiens cDNA FLJ52850 complet... 57 1e-06 DQ215539_1(DQ215539|pid:none) Taeniopygia guttata clone 0063P002... 57 1e-06 (Q9ZUU4) RecName: Full=Putative ribonucleoprotein At2g37220, chl... 57 2e-06 CP000492_2580(CP000492|pid:none) Chlorobium phaeobacteroides DSM... 57 2e-06 (P60824) RecName: Full=Cold-inducible RNA-binding protein; AltNa... 57 2e-06 EU959070_1(EU959070|pid:none) Zea mays clone 210066 hypothetical... 57 2e-06 BX294151_174(BX294151|pid:none) Rhodopirellula baltica SH 1 comp... 57 2e-06 CP000139_431(CP000139|pid:none) Bacteroides vulgatus ATCC 8482, ... 57 2e-06 EU559167_101(EU559167|pid:none) Candidatus Nitrospira defluvii C... 57 2e-06 AY088648_1(AY088648|pid:none) Arabidopsis thaliana clone 8849 mR... 57 2e-06 CP000254_345(CP000254|pid:none) Methanospirillum hungatei JF-1, ... 57 2e-06 CP000254_1516(CP000254|pid:none) Methanospirillum hungatei JF-1,... 56 2e-06 (Q24491) RecName: Full=RNA-binding protein Rsf1; AltName: Full=R... 56 2e-06 FB872108_1(FB872108|pid:none) Sequence 91381 from Patent WO20080... 56 2e-06 AF240679_1(AF240679|pid:none) Cucumis sativus poly(A)-binding pr... 56 2e-06 CR382123_496(CR382123|pid:none) Kluyveromyces lactis strain NRRL... 56 2e-06 BC168959_1(BC168959|pid:none) Rattus norvegicus poly(A) binding ... 56 2e-06 BC041204_1(BC041204|pid:none) Xenopus laevis cold inducible RNA-... 56 2e-06 (P42731) RecName: Full=Polyadenylate-binding protein 2; ... 56 2e-06 BT077917_1(BT077917|pid:none) Lepeophtheirus salmonis Pacific fo... 56 2e-06 CP000473_7431(CP000473|pid:none) Solibacter usitatus Ellin6076, ... 56 2e-06 AK070743_1(AK070743|pid:none) Oryza sativa Japonica Group cDNA c... 56 3e-06 CP000473_989(CP000473|pid:none) Solibacter usitatus Ellin6076, c... 56 3e-06 AM920430_123(AM920430|pid:none) Penicillium chrysogenum Wisconsi... 56 3e-06 BT080325_1(BT080325|pid:none) Caligus clemensi clone ccle-evs-50... 56 3e-06 DQ120644_1(DQ120644|pid:none) Hylobates lar PABP3 gene, partial ... 56 3e-06 BX842649_260(BX842649|pid:none) Bdellovibrio bacteriovorus compl... 56 3e-06 DQ336954_2(DQ336954|pid:none) Glycine max cultivar Williams 82 c... 56 3e-06 AE017125_319(AE017125|pid:none) Helicobacter hepaticus ATCC 5144... 56 3e-06 AE015928_3838(AE015928|pid:none) Bacteroides thetaiotaomicron VP... 56 3e-06 (P49311) RecName: Full=Glycine-rich RNA-binding protein GRP2A; ... 56 3e-06 (P29341) RecName: Full=Polyadenylate-binding protein 1; ... 55 3e-06 AK298990_1(AK298990|pid:none) Homo sapiens cDNA FLJ59219 complet... 55 3e-06 (Q9H361) RecName: Full=Polyadenylate-binding protein 3; ... 55 3e-06 DQ120646_1(DQ120646|pid:none) Aotus trivirgatus PABP3 gene, part... 55 3e-06 (Q5R8F7) RecName: Full=Polyadenylate-binding protein 1; ... 55 3e-06 DQ120640_1(DQ120640|pid:none) Homo sapiens PABP3 gene, partial c... 55 3e-06 S52491(S52491) polyadenylate binding protein II - human &Z48501... 55 3e-06 BT087787_1(BT087787|pid:none) Zea mays full-length cDNA clone ZM... 55 3e-06 DQ120645_1(DQ120645|pid:none) Cercopithecus sabaeus PABP3 gene, ... 55 3e-06 (P11940) RecName: Full=Polyadenylate-binding protein 1; ... 55 3e-06 EF085266_1(EF085266|pid:none) Picea sitchensis clone WS02718_G07... 55 3e-06 AJ719881_1(AJ719881|pid:none) Gallus gallus mRNA for hypothetica... 55 3e-06 (Q9EPH8) RecName: Full=Polyadenylate-binding protein 1; ... 55 3e-06 AK089747_1(AK089747|pid:none) Mus musculus activated spleen cDNA... 55 3e-06 DQ120643_1(DQ120643|pid:none) Pongo pygmaeus PABP3 gene, partial... 55 3e-06 AF132026_1(AF132026|pid:none) Homo sapiens testis-specific poly(... 55 3e-06 AY085838_1(AY085838|pid:none) Arabidopsis thaliana clone 18903 m... 55 4e-06 AK342546_1(AK342546|pid:none) Acyrthosiphon pisum ACYPI010185 mR... 55 4e-06 FB912195_1(FB912195|pid:none) Sequence 131468 from Patent WO2008... 55 4e-06 AK319051_1(AK319051|pid:none) Arabidopsis thaliana AT2G21660 mRN... 55 4e-06 CP000909_1815(CP000909|pid:none) Chloroflexus aurantiacus J-10-f... 55 4e-06 BT033456_1(BT033456|pid:none) Zea mays full-length cDNA clone ZM... 55 4e-06 (P49313) RecName: Full=30 kDa ribonucleoprotein, chloroplastic; ... 55 4e-06 AC084766_7(AC084766|pid:none) Oryza sativa chromosome 3 BAC OSJN... 55 4e-06 AC122728_12(AC122728|pid:none) Medicago truncatula clone mth2-22... 55 4e-06 CR940348_585(CR940348|pid:none) Theileria annulata strain Ankara... 55 4e-06 AP001297_2(AP001297|pid:none) Arabidopsis thaliana genomic DNA, ... 55 4e-06 AF349964_1(AF349964|pid:none) Daucus carota poly(A)-binding prot... 55 4e-06 BT062575_1(BT062575|pid:none) Zea mays full-length cDNA clone ZM... 55 4e-06 BT053136_1(BT053136|pid:none) Medicago truncatula clone MTYFL_FM... 55 4e-06 S55785(S55785;S68087;T37634;S52318) nucleolar protein gar2 - fis... 55 4e-06 CP001635_319(CP001635|pid:none) Variovorax paradoxus S110 chromo... 55 4e-06 CP000581_580(CP000581|pid:none) Ostreococcus lucimarinus CCE9901... 55 6e-06 AF190655_1(AF190655|pid:none) Nicotiana tabacum poly(A)-binding ... 55 6e-06 T22767(T22767) hypothetical protein F56A8.6 - Caenorhabditis ele... 55 6e-06 CU928179_297(CU928179|pid:none) Zygosaccharomyces rouxii strain ... 55 6e-06 BC108786_1(BC108786|pid:none) Xenopus laevis similar to RNA bind... 55 6e-06 CR954209_116(CR954209|pid:none) Ostreococcus tauri strain OTTH05... 55 6e-06 BC045210_1(BC045210|pid:none) Xenopus laevis similar to RNA bind... 55 6e-06 AK131715_1(AK131715|pid:none) Mus musculus adult male testis cDN... 55 6e-06 CR380951_131(CR380951|pid:none) Candida glabrata strain CBS138 c... 55 6e-06 BT074603_1(BT074603|pid:none) Osmerus mordax clone omor-rgc-514-... 55 6e-06 AC134242_12(AC134242|pid:none) Medicago truncatula clone mth2-10... 55 6e-06 BC051134_1(BC051134|pid:none) Mus musculus poly(A) binding prote... 55 6e-06 U61842_1(U61842|pid:none) Fusarium solani cutinase negative acti... 55 6e-06 CP000492_1229(CP000492|pid:none) Chlorobium phaeobacteroides DSM... 55 6e-06 AL606453_1(AL606453|pid:none) Oryza sativa genomic DNA, chromoso... 55 6e-06 FJ502080_1(FJ502080|pid:none) Aristichthys nobilis clone B26 pol... 55 6e-06 AC134242_21(AC134242|pid:none) Medicago truncatula clone mth2-10... 54 8e-06 (Q4VXU2) RecName: Full=Polyadenylate-binding protein 1-like; &A... 54 8e-06 CP000141_379(CP000141|pid:none) Carboxydothermus hydrogenoforman... 54 8e-06 CP000478_83(CP000478|pid:none) Syntrophobacter fumaroxidans MPOB... 54 8e-06 AM920435_1013(AM920435|pid:none) Penicillium chrysogenum Wiscons... 54 8e-06 AP007157_331(AP007157|pid:none) Aspergillus oryzae RIB40 genomic... 54 8e-06 S71779(S71779) glycine-rich RNA-binding protein GRP1 - wheat &U... 54 8e-06 (O89086) RecName: Full=Putative RNA-binding protein 3; AltName: ... 54 8e-06 FB872092_1(FB872092|pid:none) Sequence 91365 from Patent WO20080... 54 8e-06 EF147596_1(EF147596|pid:none) Populus trichocarpa clone WS0123_K... 54 8e-06 AL136900_1(AL136900|pid:none) Homo sapiens mRNA; cDNA DKFZp434M1... 54 8e-06 AM447494_2(AM447494|pid:none) Vitis vinifera contig VV78X024983.... 54 8e-06 D38485_1(D38485|pid:none) Triticum aestivum mRNA for Ps16 protei... 54 8e-06 AF310215_1(AF310215|pid:none) Sorghum bicolor glycine-rich RNA-b... 54 8e-06 EF144922_1(EF144922|pid:none) Populus trichocarpa clone WS01119_... 54 8e-06 AY506544_1(AY506544|pid:none) Lycopersicon esculentum DNA-bindin... 54 1e-05 CP000860_1791(CP000860|pid:none) Candidatus Desulforudis audaxvi... 54 1e-05 AK064923_1(AK064923|pid:none) Oryza sativa Japonica Group cDNA c... 54 1e-05 CR954201_559(CR954201|pid:none) Ostreococcus tauri strain OTTH05... 54 1e-05 AX886322_1(AX886322|pid:none) Sequence 2185 from Patent EP1033401. 54 1e-05 U71299_1(U71299|pid:none) Ambystoma mexicanum RNA-binding protei... 54 1e-05 AB044535_1(AB044535|pid:none) Xenopus laevis xCIRP2 mRNA for col... 54 1e-05 CP000127_2662(CP000127|pid:none) Nitrosococcus oceani ATCC 19707... 54 1e-05 BC077356_1(BC077356|pid:none) Xenopus laevis similar to RNA bind... 54 1e-05 FJ356060_1(FJ356060|pid:none) Chorispora bungeana putative glyci... 54 1e-05 AE010300_1919(AE010300|pid:none) Leptospira interrogans serovar ... 54 1e-05 CU633867_79(CU633867|pid:none) Podospora anserina genomic DNA ch... 54 1e-05 AB062910_1(AB062910|pid:none) Physcomitrella patens PpGRP2 mRNA ... 54 1e-05 AB170452_1(AB170452|pid:none) Macaca fascicularis brain cDNA clo... 54 1e-05 (Q99070) RecName: Full=Glycine-rich RNA-binding protein 2; &FB8... 54 1e-05 (Q9NEW6) RecName: Full=Probable splicing factor, arginine/serine... 54 1e-05 AK243636_1(AK243636|pid:none) Oryza sativa Japonica Group cDNA, ... 54 1e-05 (Q9H0L4) RecName: Full=Cleavage stimulation factor 64 kDa subuni... 54 1e-05 AP010904_1161(AP010904|pid:none) Desulfovibrio magneticus RS-1 D... 54 1e-05 EU076902_1(EU076902|pid:none) Bambusa oldhamii putative glycine-... 54 1e-05 AJ002893_1(AJ002893|pid:none) Oryza sativa mRNA for glycine-rich... 54 1e-05 (Q8C7E9) RecName: Full=Cleavage stimulation factor 64 kDa subuni... 54 1e-05 DQ191652_1(DQ191652|pid:none) Solanum tuberosum RNA binding prot... 54 1e-05 AM270034_36(AM270034|pid:none) Aspergillus niger contig An02c040... 54 1e-05 BC028239_1(BC028239|pid:none) Homo sapiens cleavage stimulation ... 54 1e-05 BC169065_1(BC169065|pid:none) Rattus norvegicus cleavage stimula... 54 1e-05 DQ497204_1(DQ497204|pid:none) Bombyx mori Rsf1 mRNA, complete cds. 54 1e-05 CP001635_5229(CP001635|pid:none) Variovorax paradoxus S110 chrom... 54 1e-05 AK084696_1(AK084696|pid:none) Mus musculus 13 days embryo heart ... 54 1e-05 BC099992_1(BC099992|pid:none) Danio rerio poly A binding protein... 54 1e-05 BC053126_1(BC053126|pid:none) Danio rerio poly(A) binding protei... 53 2e-05 AC002391_1(AC002391|pid:none) Arabidopsis thaliana chromosome 2 ... 53 2e-05 AL671915_5(AL671915|pid:none) Mouse DNA sequence from clone RP23... 53 2e-05 BT080536_1(BT080536|pid:none) Caligus clemensi clone ccle-evs-51... 53 2e-05 EF082522_1(EF082522|pid:none) Picea sitchensis clone WS0297_G20 ... 53 2e-05 CP001392_3422(CP001392|pid:none) Diaphorobacter sp. TPSY, comple... 53 2e-05 (Q5RDA3) RecName: Full=Cleavage stimulation factor 64 kDa subuni... 53 2e-05 BC126543_1(BC126543|pid:none) Bos taurus cleavage stimulation fa... 53 2e-05 AB207971_1(AB207971|pid:none) Lolium perenne gene for glycine-ri... 53 2e-05 AK341489_1(AK341489|pid:none) Acyrthosiphon pisum ACYPI003349 mR... 53 2e-05 (Q8HXM1) RecName: Full=Cleavage stimulation factor 64 kDa subuni... 53 2e-05 AJ002894_1(AJ002894|pid:none) Oryza sativa mRNA for glycine rich... 53 2e-05 DQ120650_1(DQ120650|pid:none) Homo sapiens RBM1 gene, partial cds. 53 2e-05 AE017341_447(AE017341|pid:none) Cryptococcus neoformans var. neo... 53 2e-05 EU616680_1(EU616680|pid:none) Mus musculus betaCstF-64 variant 3... 53 2e-05 AP006840_1009(AP006840|pid:none) Symbiobacterium thermophilum IA... 53 2e-05 AM468150_4(AM468150|pid:none) Vitis vinifera contig VV78X086105.... 53 2e-05 AB462999_1(AB462999|pid:none) Synthetic construct DNA, clone: pF... 53 2e-05 AC150977_20(AC150977|pid:none) Medicago truncatula clone mth2-32... 53 2e-05 EU616682_1(EU616682|pid:none) Mus musculus betaCstF-64 variant 1... 53 2e-05 AJ719664_1(AJ719664|pid:none) Gallus gallus mRNA for hypothetica... 53 2e-05 AP009178_278(AP009178|pid:none) Nitratiruptor sp. SB155-2 genomi... 53 2e-05 (P39697) RecName: Full=40S ribosomal protein S19, mitochondrial;... 53 2e-05 BC033135_1(BC033135|pid:none) Homo sapiens, Similar to cleavage ... 53 2e-05 AK032817_1(AK032817|pid:none) Mus musculus 12 days embryo male w... 53 2e-05 CR940353_284(CR940353|pid:none) Theileria annulata strain Ankara... 53 2e-05 DQ120651_1(DQ120651|pid:none) Pan troglodytes RBM1 gene, partial... 53 2e-05 DQ120655_1(DQ120655|pid:none) Cercopithecus sabaeus RBM1 gene, p... 53 2e-05 BC041291_1(BC041291|pid:none) Xenopus laevis cleavage stimulatio... 53 2e-05 AF411956_7(AF411956|pid:none) Takifugu rubripes lck gene locus, ... 53 2e-05 AP000419_3(AP000419|pid:none) Arabidopsis thaliana genomic DNA, ... 53 2e-05 FB912281_1(FB912281|pid:none) Sequence 131554 from Patent WO2008... 53 2e-05 BT070011_1(BT070011|pid:none) Zea mays full-length cDNA clone ZM... 53 2e-05 CP000828_5426(CP000828|pid:none) Acaryochloris marina MBIC11017,... 53 2e-05 EU963022_1(EU963022|pid:none) Zea mays clone 247507 plastid-spec... 53 2e-05 BC065442_1(BC065442|pid:none) Danio rerio cleavage stimulation f... 53 2e-05 CP000529_1915(CP000529|pid:none) Polaromonas naphthalenivorans C... 53 2e-05 FB912275_1(FB912275|pid:none) Sequence 131548 from Patent WO2008... 53 2e-05 A86320(A86320) hypothetical protein F26I16.3 - Arabidopsis thali... 53 2e-05 AC136449_14(AC136449|pid:none) Medicago truncatula clone mth2-11... 53 2e-05 AP008209_2228(AP008209|pid:none) Oryza sativa (japonica cultivar... 53 2e-05 AB170602_1(AB170602|pid:none) Macaca fascicularis brain cDNA clo... 53 2e-05 AK226472_1(AK226472|pid:none) Arabidopsis thaliana mRNA for puta... 53 2e-05 AK300411_1(AK300411|pid:none) Homo sapiens cDNA FLJ50863 complet... 53 2e-05 AC092557_8(AC092557|pid:none) Oryza sativa chromosome 3 BAC OSJN... 53 2e-05 AC148528_1(AC148528|pid:none) Medicago truncatula clone mth2-53h... 53 2e-05 AP004384_18(AP004384|pid:none) Oryza sativa Japonica Group genom... 53 2e-05 (Q5AI15) RecName: Full=Polyadenylate-binding protein, cytoplasmi... 53 2e-05 DQ241855_1(DQ241855|pid:none) Solanum tuberosum clone 002F03 put... 53 2e-05 AY084821_1(AY084821|pid:none) Arabidopsis thaliana clone 118696 ... 53 2e-05 AM478333_2(AM478333|pid:none) Vitis vinifera contig VV78X160178.... 53 2e-05 FJ527019_1(FJ527019|pid:none) Macaca mulatta truncated RNA bindi... 52 3e-05 AF009003_1(AF009003|pid:none) Pelargonium x hortorum glycine-ric... 52 3e-05 U30829_1(U30829|pid:none) Human splicing factor SRp55-3 (SRp55) ... 52 3e-05 (Q05966) RecName: Full=Glycine-rich RNA-binding protein 10; &FB... 52 3e-05 AF005359_1(AF005359|pid:none) Nicotiana glutinosa RNA-binding pr... 52 3e-05 AK316998_1(AK316998|pid:none) Arabidopsis thaliana AT3G52150 mRN... 52 3e-05 AJ302060_1(AJ302060|pid:none) Oryza sativa mRNA for glycine rich... 52 3e-05 D26182_1(D26182|pid:none) Nicotiana sylvestris mRNA for RNA-bind... 52 3e-05 BX842646_292(BX842646|pid:none) Bdellovibrio bacteriovorus compl... 52 3e-05 FJ499499_1(FJ499499|pid:none) Metarhizium anisopliae cold respon... 52 3e-05 AY048973_1(AY048973|pid:none) Solanum tuberosum RNA-binding prot... 52 3e-05 (Q6DEY7) RecName: Full=Embryonic polyadenylate-binding protein; ... 52 3e-05 U30828_1(U30828|pid:none) Human splicing factor SRp55-2 (SRp55) ... 52 3e-05 DQ972964_1(DQ972964|pid:none) Sus scrofa SFRS6 mRNA, complete cds. 52 3e-05 EU964628_1(EU964628|pid:none) Zea mays clone 280456 glycine-rich... 52 3e-05 AF389431_1(AF389431|pid:none) Solanum tuberosum single-stranded ... 52 3e-05 AF011331_1(AF011331|pid:none) Oryza sativa glycine-rich protein ... 52 3e-05 BT059420_1(BT059420|pid:none) Salmo salar clone ssal-rgf-539-367... 52 3e-05 AF338225_1(AF338225|pid:none) Xenopus laevis embryonic poly(A) b... 52 4e-05 (Q9SVM8) RecName: Full=Glycine-rich RNA-binding protein 2, mitoc... 52 4e-05 BT086379_1(BT086379|pid:none) Zea mays full-length cDNA clone ZM... 52 4e-05 FB912265_1(FB912265|pid:none) Sequence 131538 from Patent WO2008... 52 4e-05 BT056110_1(BT056110|pid:none) Zea mays full-length cDNA clone ZM... 52 4e-05 CP000232_555(CP000232|pid:none) Moorella thermoacetica ATCC 3907... 52 4e-05 AK340903_1(AK340903|pid:none) Acyrthosiphon pisum ACYPI006929 mR... 52 4e-05 FB912181_1(FB912181|pid:none) Sequence 131454 from Patent WO2008... 52 4e-05 EU955477_1(EU955477|pid:none) Zea mays clone 1533996 unknown mRNA. 52 4e-05 FB872172_1(FB872172|pid:none) Sequence 91445 from Patent WO20080... 52 4e-05 BT064695_1(BT064695|pid:none) Zea mays full-length cDNA clone ZM... 52 4e-05 S31443(S31443) glycine-rich RNA-binding protein (clone A81) - Ar... 52 4e-05 EU979486_1(EU979486|pid:none) Ornithoctonus huwena clone HWE183 ... 52 4e-05 BT050206_1(BT050206|pid:none) Salmo salar clone ssal-evf-501-088... 52 4e-05 FB872168_1(FB872168|pid:none) Sequence 91441 from Patent WO20080... 52 4e-05 CP000240_802(CP000240|pid:none) Synechococcus sp. JA-2-3B'a(2-13... 52 4e-05 BT040007_1(BT040007|pid:none) Zea mays full-length cDNA clone ZM... 52 4e-05 DQ788634_1(DQ788634|pid:none) Squalus acanthias putative polyade... 52 4e-05 EU954539_1(EU954539|pid:none) Zea mays clone 1469740 glycine-ric... 52 4e-05 BT038108_1(BT038108|pid:none) Zea mays full-length cDNA clone ZM... 52 4e-05 DQ440228_1(DQ440228|pid:none) Aedes aegypti clone AET-265 polyad... 52 4e-05 AC120985_6(AC120985|pid:none) Oryza sativa (japonica cultivar-gr... 52 4e-05 AY360385_9(AY360385|pid:none) Oryza sativa (japonica cultivar-gr... 52 4e-05 BT065686_1(BT065686|pid:none) Zea mays full-length cDNA clone ZM... 52 4e-05 EU955970_1(EU955970|pid:none) Zea mays clone 1554524 glycine-ric... 52 4e-05 CP000644_1611(CP000644|pid:none) Aeromonas salmonicida subsp. sa... 52 5e-05 AF496715_1(AF496715|pid:none) Zea mays cultivar F_2 glycine-rich... 52 5e-05 CP000685_1297(CP000685|pid:none) Flavobacterium johnsoniae UW101... 52 5e-05 AL844504_170(AL844504|pid:none) Plasmodium falciparum 3D7 chromo... 52 5e-05 FB912257_1(FB912257|pid:none) Sequence 131530 from Patent WO2008... 52 5e-05 CP000930_2604(CP000930|pid:none) Heliobacterium modesticaldum Ic... 52 5e-05 AP008210_632(AP008210|pid:none) Oryza sativa (japonica cultivar-... 52 5e-05 CP000316_616(CP000316|pid:none) Polaromonas sp. JS666, complete ... 52 5e-05 AC134242_17(AC134242|pid:none) Medicago truncatula clone mth2-10... 52 5e-05 AC137701_16(AC137701|pid:none) Medicago truncatula clone mth2-35... 52 5e-05 AK005907_1(AK005907|pid:none) Mus musculus adult male testis cDN... 52 5e-05 AJ441311_1(AJ441311|pid:none) Rumex obtusifolius mRNA for putati... 52 5e-05 BT066563_1(BT066563|pid:none) Zea mays full-length cDNA clone ZM... 52 5e-05 CR382133_554(CR382133|pid:none) Debaryomyces hansenii strain CBS... 52 5e-05 AL731601_2(AL731601|pid:none) Oryza sativa genomic DNA, chromoso... 52 5e-05 AC005896_29(AC005896|pid:none) Arabidopsis thaliana chromosome 2... 52 5e-05 AB062909_1(AB062909|pid:none) Physcomitrella patens PpGRP1 mRNA ... 52 5e-05 (P27476) RecName: Full=Nuclear localization sequence-binding pro... 52 5e-05 CP000542_149(CP000542|pid:none) Verminephrobacter eiseniae EF01-... 52 5e-05 CP000462_1744(CP000462|pid:none) Aeromonas hydrophila subsp. hyd... 52 5e-05 (P49314) RecName: Full=31 kDa ribonucleoprotein, chloroplastic; ... 52 5e-05 FJ830848_1(FJ830848|pid:none) Triticum aestivum cp31BHv mRNA, pa... 52 5e-05 CP000777_2648(CP000777|pid:none) Leptospira biflexa serovar Pato... 52 5e-05 CR860292_1(CR860292|pid:none) Pongo abelii mRNA; cDNA DKFZp459D2... 51 6e-05 AC151621_26(AC151621|pid:none) Medicago truncatula clone mth2-14... 51 6e-05 EF086676_1(EF086676|pid:none) Picea sitchensis clone WS02733_K19... 51 6e-05 AB023044_25(AB023044|pid:none) Arabidopsis thaliana genomic DNA,... 51 6e-05 BC059662_1(BC059662|pid:none) Danio rerio poly A binding protein... 51 6e-05 EU969871_1(EU969871|pid:none) Zea mays clone 336682 glycine-rich... 51 6e-05 EU569289_1(EU569289|pid:none) Nicotiana tabacum glycine-rich RNA... 51 6e-05 FB872176_1(FB872176|pid:none) Sequence 91449 from Patent WO20080... 51 6e-05 AF370132_1(AF370132|pid:none) Arabidopsis thaliana unknown prote... 51 6e-05 AK297327_1(AK297327|pid:none) Homo sapiens cDNA FLJ51677 complet... 51 6e-05 BT039258_1(BT039258|pid:none) Zea mays full-length cDNA clone ZM... 51 6e-05 AE010300_3755(AE010300|pid:none) Leptospira interrogans serovar ... 51 6e-05 AE017347_305(AE017347|pid:none) Cryptococcus neoformans var. neo... 51 6e-05 (P10979) RecName: Full=Glycine-rich RNA-binding, abscisic acid-i... 51 6e-05 AC127168_23(AC127168|pid:none) Medicago truncatula clone mth2-15... 51 6e-05 (Q08937) RecName: Full=29 kDa ribonucleoprotein B, chloroplastic... 51 6e-05 AP006840_2840(AP006840|pid:none) Symbiobacterium thermophilum IA... 51 6e-05 (P60047) RecName: Full=Polyadenylate-binding protein 5; ... 51 6e-05 AL122118_1(AL122118|pid:none) Homo sapiens mRNA; cDNA DKFZp434O1... 51 6e-05 AY398370_1(AY398370|pid:none) Danio rerio clone RK105A4F05 poly(... 51 6e-05 AK067252_1(AK067252|pid:none) Oryza sativa Japonica Group cDNA c... 51 6e-05 BT084556_1(BT084556|pid:none) Zea mays full-length cDNA clone ZM... 51 6e-05 FN365483_2(FN365483|pid:none) Schistosoma mansoni genome sequenc... 51 6e-05 FB872162_1(FB872162|pid:none) Sequence 91435 from Patent WO20080... 51 6e-05 EU971223_1(EU971223|pid:none) Zea mays clone 359846 glycine-rich... 51 6e-05 AL662874_3(AL662874|pid:none) Human DNA sequence from clone RP13... 51 6e-05 U51555_1(U51555|pid:none) Tetrahymena thermophila nucleolar phos... 51 6e-05 BT052587_1(BT052587|pid:none) Medicago truncatula clone MTYFD_FE... 51 6e-05 BT036700_1(BT036700|pid:none) Zea mays full-length cDNA clone ZM... 51 6e-05 FN392320_99(FN392320|pid:none) Pichia pastoris GS115 chromosome ... 51 6e-05 BC044513_1(BC044513|pid:none) Danio rerio zgc:55855, mRNA (cDNA ... 51 6e-05 AC120985_5(AC120985|pid:none) Oryza sativa (japonica cultivar-gr... 51 6e-05 FN392322_179(FN392322|pid:none) Pichia pastoris GS115 chromosome... 51 8e-05 (A5DM21) RecName: Full=Polyadenylate-binding protein, cytoplasmi... 51 8e-05 AF496713_1(AF496713|pid:none) Zea mays cultivar B_6 glycine-rich... 51 8e-05 CP001358_1996(CP001358|pid:none) Desulfovibrio desulfuricans sub... 51 8e-05 (Q03251) RecName: Full=Glycine-rich RNA-binding protein 8; AltNa... 51 8e-05 CP000533_110(CP000533|pid:none) Polaromonas naphthalenivorans CJ... 51 8e-05 CR940347_278(CR940347|pid:none) Theileria annulata strain Ankara... 51 8e-05 AF009411_1(AF009411|pid:none) Oryza sativa glycine-rich RNA-bind... 51 8e-05 AK067492_1(AK067492|pid:none) Oryza sativa Japonica Group cDNA c... 51 8e-05 AF496702_1(AF496702|pid:none) Zea mays cultivar H_1 glycine-rich... 51 8e-05 EU959113_1(EU959113|pid:none) Zea mays clone 210450 glycine-rich... 51 8e-05 BT035966_1(BT035966|pid:none) Zea mays full-length cDNA clone ZM... 51 8e-05 CU928174_487(CU928174|pid:none) Zygosaccharomyces rouxii strain ... 51 8e-05 AF496726_1(AF496726|pid:none) Zea mays cultivar F_1 glycine-rich... 51 8e-05 D31715_1(D31715|pid:none) Arabidopsis thaliana gene for RNA-bind... 51 8e-05 BC070649_1(BC070649|pid:none) Xenopus laevis hypothetical protei... 51 8e-05 BC157792_1(BC157792|pid:none) Xenopus tropicalis hypothetical pr... 51 8e-05 AF496724_1(AF496724|pid:none) Zea mays cultivar D_7 glycine-rich... 51 8e-05 AF034945_1(AF034945|pid:none) Zea mays glycine-rich RNA binding ... 51 8e-05 BT014844_1(BT014844|pid:none) Arabidopsis thaliana At4g13860 gen... 51 8e-05 CP000512_4693(CP000512|pid:none) Acidovorax citrulli AAC00-1, co... 51 8e-05 AF496716_1(AF496716|pid:none) Zea mays cultivar B73 glycine-rich... 51 8e-05 AF496712_1(AF496712|pid:none) Zea mays cultivar H_4 glycine-rich... 51 8e-05 AF496703_1(AF496703|pid:none) Zea mays cultivar C_5 glycine-rich... 51 8e-05 BC061344_1(BC061344|pid:none) Xenopus tropicalis RNA binding mot... 51 8e-05 AE017342_517(AE017342|pid:none) Cryptococcus neoformans var. neo... 51 8e-05 AM445871_1(AM445871|pid:none) Vitis vinifera contig VV78X219207.... 51 8e-05 AL935272_3(AL935272|pid:none) Zebrafish DNA sequence from clone ... 51 8e-05 AM910993_34(AM910993|pid:none) Plasmodium knowlesi strain H chro... 51 8e-05 (Q8VE97) RecName: Full=Splicing factor, arginine/serine-rich 4; ... 50 1e-04 L05109_1(L05109|pid:none) Drosophila melanogaster poly(A)-bindin... 50 1e-04 AF496709_1(AF496709|pid:none) Zea mays cultivar H_5 glycine-rich... 50 1e-04 A48133(A48133) pre-mRNA splicing SRp75 - human &L14076_1(L14076... 50 1e-04 (Q2UK72) RecName: Full=Polyadenylate-binding protein, cytoplasmi... 50 1e-04 AM910989_140(AM910989|pid:none) Plasmodium knowlesi strain H chr... 50 1e-04 (Q5EA36) RecName: Full=RNA-binding protein 14; AltName: Full=RNA... 50 1e-04 AK153230_1(AK153230|pid:none) Mus musculus bone marrow macrophag... 50 1e-04 (P21187) RecName: Full=Polyadenylate-binding protein; S... 50 1e-04 AF496708_1(AF496708|pid:none) Zea mays cultivar H_3 glycine-rich... 50 1e-04 CP000348_1691(CP000348|pid:none) Leptospira borgpetersenii serov... 50 1e-04 CP000828_2532(CP000828|pid:none) Acaryochloris marina MBIC11017,... 50 1e-04 AK291509_1(AK291509|pid:none) Homo sapiens cDNA FLJ76859 complet... 50 1e-04 (A2Q848) RecName: Full=Polyadenylate-binding protein, cytoplasmi... 50 1e-04 (A1CRM1) RecName: Full=Polyadenylate-binding protein, cytoplasmi... 50 1e-04 EF082899_1(EF082899|pid:none) Picea sitchensis clone WS0279_B19 ... 50 1e-04 EU960303_1(EU960303|pid:none) Zea mays clone 223385 glycine-rich... 50 1e-04 EF087603_1(EF087603|pid:none) Picea sitchensis clone WS02729_L07... 50 1e-04 AP006841_2166(AP006841|pid:none) Bacteroides fragilis YCH46 DNA,... 50 1e-04 DQ648521_1(DQ648521|pid:none) Bombyx mori splicing factor argini... 50 1e-04 AK077648_1(AK077648|pid:none) Mus musculus 8 days embryo whole b... 50 1e-04 CU638744_475(CU638744|pid:none) Podospora anserina genomic DNA c... 50 1e-04 S30887(S30887)polyadenylate-binding protein - fruit fly (Drosoph... 50 1e-04 (Q08170) RecName: Full=Splicing factor, arginine/serine-rich 4; ... 50 1e-04 BT077560_1(BT077560|pid:none) Lepeophtheirus salmonis Pacific fo... 50 1e-04 AF496718_1(AF496718|pid:none) Zea mays cultivar CO109 glycine-ri... 50 1e-04 AP009552_4584(AP009552|pid:none) Microcystis aeruginosa NIES-843... 50 1e-04 (Q8C2Q3) RecName: Full=RNA-binding protein 14; AltName: Full=RNA... 50 1e-04 AF315633_1(AF315633|pid:none) Homo sapiens coactivator modulator... 50 1e-04 DQ972965_1(DQ972965|pid:none) Sus scrofa SFRS4 mRNA, complete cds. 50 1e-04 BT038752_1(BT038752|pid:none) Zea mays full-length cDNA clone ZM... 50 1e-04 AM746676_1878(AM746676|pid:none) Sorangium cellulosum 'So ce 56'... 50 1e-04 AF441128_1(AF441128|pid:none) Mus musculus CD-1 heterogeneous nu... 50 1e-04 CP000777_2941(CP000777|pid:none) Leptospira biflexa serovar Pato... 50 1e-04 AF496717_1(AF496717|pid:none) Zea mays cultivar I_1 glycine-rich... 50 1e-04 AP006841_2265(AP006841|pid:none) Bacteroides fragilis YCH46 DNA,... 50 1e-04 AB168869_1(AB168869|pid:none) Macaca fascicularis testis cDNA, c... 50 1e-04 (O35479) RecName: Full=Heterogeneous nuclear ribonucleoprotein G... 50 1e-04 AK133840_1(AK133840|pid:none) Mus musculus 8 days embryo whole b... 50 1e-04 AK011307_1(AK011307|pid:none) Mus musculus 10 days embryo whole ... 50 1e-04 EU965676_1(EU965676|pid:none) Zea mays clone 287902 glycine-rich... 50 1e-04 AY184814_1(AY184814|pid:none) Rattus norvegicus heterogeneous nu... 50 1e-04 AF496723_1(AF496723|pid:none) Zea mays cultivar TX601 glycine-ri... 50 1e-04 FB912223_1(FB912223|pid:none) Sequence 131496 from Patent WO2008... 50 1e-04 CT005267_237(CT005267|pid:none) Leishmania major strain Friedlin... 50 1e-04 AJ237847_1(AJ237847|pid:none) Mus musculus mRNA for heterogeneou... 50 1e-04 (P82277) RecName: Full=30S ribosomal protein 2, chloroplastic; A... 50 1e-04 S20710(S20710) hypothetical protein, 16K - mouse &X52102_1(X521... 50 1e-04 DQ351905_1(DQ351905|pid:none) Homo sapiens heterogeneous nuclear... 50 1e-04 CP000316_4803(CP000316|pid:none) Polaromonas sp. JS666, complete... 50 1e-04 AF496719_1(AF496719|pid:none) Zea mays cultivar IVANA glycine-ri... 50 1e-04 S41766(S41766;S43202)heterogeneous nuclear ribonucleoprotein G -... 50 1e-04 BC093598_1(BC093598|pid:none) Rattus norvegicus heterogeneous nu... 50 1e-04 AP008213_1538(AP008213|pid:none) Oryza sativa (japonica cultivar... 50 1e-04 AK152039_1(AK152039|pid:none) Mus musculus bone marrow macrophag... 50 1e-04 AY394938_1(AY394938|pid:none) Danio rerio clone RK045A2G06 RNA b... 50 1e-04 AJ237846_1(AJ237846|pid:none) Mus musculus mRNA for heterogeneou... 50 1e-04 (A5A6M3) RecName: Full=Heterogeneous nuclear ribonucleoprotein G... 50 1e-04 AL109936_3(AL109936|pid:none) Human DNA sequence from clone RP5-... 50 1e-04 BX640912_1(BX640912|pid:none) Homo sapiens mRNA; cDNA DKFZp686A1... 50 1e-04 (A1D4K4) RecName: Full=Polyadenylate-binding protein, cytoplasmi... 50 1e-04 AK297405_1(AK297405|pid:none) Homo sapiens cDNA FLJ53360 complet... 50 1e-04 Z23064_1(Z23064|pid:none) H.sapiens mRNA gene for hnRNP G protein. 50 1e-04 AK144682_1(AK144682|pid:none) Mus musculus lung RCB-0558 LLC cDN... 50 1e-04 AY070612_1(AY070612|pid:none) Drosophila melanogaster RE71384 fu... 50 1e-04 (Q6BI95) RecName: Full=Polyadenylate-binding protein, cytoplasmi... 50 1e-04 AE014297_3585(AE014297|pid:none) Drosophila melanogaster chromos... 50 1e-04 CR860678_1(CR860678|pid:none) Pongo abelii mRNA; cDNA DKFZp459K1... 50 1e-04 AK300029_1(AK300029|pid:none) Homo sapiens cDNA FLJ54544 complet... 50 1e-04 BX548175_2577(BX548175|pid:none) Prochlorococcus marinus MIT9313... 50 1e-04 BC067153_1(BC067153|pid:none) Danio rerio zgc:56141, mRNA (cDNA ... 50 1e-04 AJ719324_1(AJ719324|pid:none) Gallus gallus mRNA for hypothetica... 50 1e-04 AE014297_3588(AE014297|pid:none) Drosophila melanogaster chromos... 50 1e-04 AK313142_1(AK313142|pid:none) Homo sapiens cDNA, FLJ93632, highl... 50 1e-04 BC004679_1(BC004679|pid:none) Mus musculus heterogeneous nuclear... 50 1e-04 CU928171_601(CU928171|pid:none) Kluyveromyces thermotolerans str... 50 1e-04 CU633900_930(CU633900|pid:none) Podospora anserina genomic DNA c... 50 1e-04 (O43390) RecName: Full=Heterogeneous nuclear ribonucleoprotein R... 50 1e-04 BC133299_1(BC133299|pid:none) Bos taurus heterogeneous nuclear r... 50 1e-04 U70731_1(U70731|pid:none) Emericella nidulans putative poly(A)-b... 50 2e-04 AK162457_1(AK162457|pid:none) Mus musculus 12 days embryo embryo... 50 2e-04 CP001101_100(CP001101|pid:none) Chlorobium phaeobacteroides BS1,... 50 2e-04 Z78536_2(Z78536|pid:none) Caenorhabditis elegans Cosmid C07A4, c... 50 2e-04 AE015928_1887(AE015928|pid:none) Bacteroides thetaiotaomicron VP... 50 2e-04 AM778891_13(AM778891|pid:none) Microcystis aeruginosa PCC 7806 g... 50 2e-04 AF034741_1(AF034741|pid:none) Macropus eugenii heterogeneous nuc... 50 2e-04 CP000348_2308(CP000348|pid:none) Leptospira borgpetersenii serov... 50 2e-04 AC120985_7(AC120985|pid:none) Oryza sativa (japonica cultivar-gr... 50 2e-04 AY050483_1(AY050483|pid:none) Prunus avium putative glycine-rich... 50 2e-04 FB872112_1(FB872112|pid:none) Sequence 91385 from Patent WO20080... 50 2e-04 Z95327_4(Z95327|pid:none) Human DNA sequence from clone RP3-347M... 50 2e-04 BT004860_1(BT004860|pid:none) Drosophila melanogaster RE27227 fu... 50 2e-04 AE017342_233(AE017342|pid:none) Cryptococcus neoformans var. neo... 50 2e-04 AJ245939_1(AJ245939|pid:none) Ricinus communis mRNA for glycine-... 50 2e-04 BC154222_1(BC154222|pid:none) Danio rerio zgc:85696, mRNA (cDNA ... 50 2e-04 DQ646407_1(DQ646407|pid:none) Bombyx mori poly A binding protein... 50 2e-04 FM992688_313(FM992688|pid:none) Candida dubliniensis CD36 chromo... 50 2e-04 AE014297_2648(AE014297|pid:none) Drosophila melanogaster chromos... 50 2e-04 AM778891_14(AM778891|pid:none) Microcystis aeruginosa PCC 7806 g... 50 2e-04 CP000462_72(CP000462|pid:none) Aeromonas hydrophila subsp. hydro... 50 2e-04 BC076931_1(BC076931|pid:none) Xenopus tropicalis polyadenylate-b... 50 2e-04 CP001324_684(CP001324|pid:none) Micromonas sp. RCC299 chromosome... 50 2e-04 AL732352_13(AL732352|pid:none) Oryza sativa genomic DNA, chromos... 49 2e-04 CP000828_527(CP000828|pid:none) Acaryochloris marina MBIC11017, ... 49 2e-04 FB912187_1(FB912187|pid:none) Sequence 131460 from Patent WO2008... 49 2e-04 BC046668_1(BC046668|pid:none) Xenopus laevis similar to splicing... 49 2e-04 AL049711_26(AL049711|pid:none) Arabidopsis thaliana DNA chromoso... 49 2e-04 BC065640_1(BC065640|pid:none) Danio rerio zgc:77282, mRNA (cDNA ... 49 2e-04 FN320327_1(FN320327|pid:none) Schistosoma japonicum isolate Anhu... 49 2e-04 BT058726_1(BT058726|pid:none) Salmo salar clone ssal-rgf-001-131... 49 2e-04 AM502227_10(AM502227|pid:none) Leishmania infantum chromosome 9. 49 2e-04 AM920437_1689(AM920437|pid:none) Penicillium chrysogenum Wiscons... 49 2e-04 BT044808_1(BT044808|pid:none) Salmo salar clone ssal-rgf-504-108... 49 2e-04 AB023046_18(AB023046|pid:none) Arabidopsis thaliana genomic DNA,... 49 2e-04 AJ717349_1(AJ717349|pid:none) Danio rerio mRNA for RNA binding m... 49 2e-04
>D31712_1(D31712|pid:none) Arabidopsis thaliana gene for RNA-binding protein cp31, complete cds, clone: lambda 22. &S53492(S53492;S53493;S55447) Length = 314
Score = 65.1 bits (157), Expect = 4e-09 Identities = 29/78 (37%), Positives = 53/78 (67%), Gaps = 2/78 (2%) Frame = +1
Query: 172 AHRIFVGNLTENVESSTLETAFAEFGKVLSVRII--KKKFKSNTFGFVDMEDLETANKAV 345 A R++VGNL +V++ LE F+E GKV+ R++ ++ +S FGFV M D++ N+A+ Sbjct: 228 AFRVYVGNLPWDVDNGRLEQLFSEHGKVVEARVVYDRETGRSRGFGFVTMSDVDELNEAI 287
Query: 346 AAINGREFDGKQVNVEIA 399 +A++G+ +G+ + V +A Sbjct: 288 SALDGQNLEGRAIRVNVA 305
Score = 43.9 bits (102), Expect = 0.010 Identities = 25/81 (30%), Positives = 45/81 (55%), Gaps = 2/81 (2%) Frame = +1
Query: 733 LFVRNIPYSFDDVKLLETFKDCSPK-SAHVIVNKHTNRSKGFGFVEFDDVANQQKGLT-L 906 ++V N+P+ D+ +L + F + A V+ ++ T RS+GFGFV DV + ++ L Sbjct: 231 VYVGNLPWDVDNGRLEQLFSEHGKVVEARVVYDRETGRSRGFGFVTMSDVDELNEAISAL 290
Query: 907 NKLSVESRELSVKIALVPEPR 969 + ++E R + V +A PR Sbjct: 291 DGQNLEGRAIRVNVAEERPPR 311
Score = 42.0 bits (97), Expect = 0.039 Identities = 25/76 (32%), Positives = 39/76 (51%), Gaps = 2/76 (2%) Frame = +1
Query: 178 RIFVGNLTENVESSTLETAFAEFGKVLSVRII--KKKFKSNTFGFVDMEDLETANKAVAA 351 ++FVGNL +V S L F + G V +I ++ +S FGFV M ++ A AV Sbjct: 136 KLFVGNLAYDVNSQALAMLFEQAGTVEIAEVIYNRETDQSRGFGFVTMSSVDEAETAVEK 195
Query: 352 INGREFDGKQVNVEIA 399 N + +G+ + V A Sbjct: 196 FNRYDLNGRLLTVNKA 211
Score = 37.4 bits (85), Expect = 0.96 Identities = 24/75 (32%), Positives = 37/75 (49%), Gaps = 2/75 (2%) Frame = +1
Query: 733 LFVRNIPYSFDDVKLLETFKDCSP-KSAHVIVNKHTNRSKGFGFVEFDDVANQQKGL-TL 906 LFV N+ Y + L F+ + A VI N+ T++S+GFGFV V + + Sbjct: 137 LFVGNLAYDVNSQALAMLFEQAGTVEIAEVIYNRETDQSRGFGFVTMSSVDEAETAVEKF 196
Query: 907 NKLSVESRELSVKIA 951 N+ + R L+V A Sbjct: 197 NRYDLNGRLLTVNKA 211
Lambda K H 0.318 0.134 0.401
Gapped Lambda K H 0.267 0.0410 0.140
Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 3236559 Number of Hits to DB: 1,122,457,355 Number of extensions: 17672075 Number of successful extensions: 61921 Number of sequences better than 10.0: 2837 Number of HSP's gapped: 60728 Number of HSP's successfully gapped: 4404 Length of query: 371 Length of database: 1,051,180,864 Length adjustment: 130 Effective length of query: 241 Effective length of database: 630,428,194 Effective search space: 151933194754 Effective search space used: 151933194754 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 32 (16.9 bits)
|
PSORT |
|
VS (DIR, S) |
2 |
VH (FL, L) |
0 |
VF (FL, S) |
4 |
AH (FL, L) |
0 |
AF (FL, S) |
0 |
SL (DIR, L) |
5 |
SS (DIR, S) |
2 |
SH (FL, L) |
0 |
SF (FL, S) |
0 |
CH (FL, L) |
1 |
CF (FL, S) |
0 |
FCL (DIR, L) |
0 |
FC (DIR, S) |
4 |
FC-IC (SUB) |
1 |