Contig-U15074-1
Contig ID Contig-U15074-1
Contig update 2004. 6.11
Contig sequence
>Contig-U15074-1 (Contig-U15074-1Q) /CSM_Contig/Contig-U15074-1Q.Seq.d
AAAATTTTTTATAACAATAGAAATATTGGGATATTATTATTATTATTATT
AATAGATAAAAAAAAGAATGGAGAAACAAGCGGAAAAACAATTAGAGAAA
CAATTAGAATCATTTATATTACATTTAAAGAGAAAAACAGTTGTTGGATC
ATATCAAGTATCAAGAGCCTCTGCAGAATTACTTAGACAATGGGTACATA
AAGGTAAATGGGGAAATGCAAAATCATTGATTGATCAAATCAAAATAATT
GGTAAAAAGTTAATGAATGCACAACCATTAGAATTTTGTATTGGTAACAT
AGTTAGAAGAGTATTATTTATAATTAGAGAAGAATATTTAACATTTTTTA
GAAATAAAAAGAATGGTTTAAATAATGATGATTATGATGATGATGATTTT
GAAACTACTACCAGTAATAACAACAACAACAATAATAATAATAATATTAA
TAGTAGTAGTAATATCAATAAAAATAATAAATATAGTAATGTTATGTTAC
AAGACGATCCAATTGATGATCAAGAAGATATCGATTTCACTGAAACATTC
CCAAGATTAAAAGCTGCAATCATGGATAGTATCAATGAATTAATTGATGA
ATTAGAAGGTCTTCATAGAAATGTTGCTGAACAAGCAATTGAACATATTC
ATTCAAATGAAACCATCATGACTTTAGGTTGTTCAAGAACCGTTGAAGAA
TTCTTAAAAGAAGCAATGCAAAATCATTGATTGATCAAATCAAAATAATT
GGTAAAAAGTTAATGAATGCNCANCCATTAGAATTTTGTATTGGTAACAT
AGTTAGAAGAGTATTATTTATAATTAGAGAAGAATATTTAACATTTTTTA
GAAATAAAAAGAATGGTTTAAATAATGATGATTATGATGATGATGATTTT
GAAACTACTACCAGTAATAACAACAACAACAATAATAATAATAATATTAA
TAGTAGTAGTAATATCAATAAAAATAATAAATATAGTAATGTTATGTTAC
AAGACGATCCAATTGATGATCAAGAAGATATCGATTTCACTGAAACATTC
CCAAGATTAAAAGCTGCAATCATGGATAGTATCAATGAATTAATTGATGA
ATTAGAAGGTCTTCATAGAAATGTTGCTGAACAAGCAATTGAACATATTC
ATTCAAATGAAACCATCATGACTTTAGGTTGTTCAAGAACCGTTGAAGAA
TTCTTAAAAGAAGCTGCTAGAAAAAGAAGTTTTAAAGTTATTGTTGTTGA
AACTGCTCCATCACTTGAAGGTCAAAAAACAGCAATTTCATTATCAAAAG
CATCAATCGATACAACATTAATTACAGATTCAGCAGTATTTGCAATGATG
TCACGTGTTAATAAAGTTATTATTGGTACACATGCAGTAATGGCCAATGG
TGGTTTAATTGCTACCTCTGGTACACATACATTGGCTGTAGCTGCTAAAT
ATCACTCTGTACCAATAGTGGTTTGTACTGGTCTTTATAAACTCTGTCCA
TTATATGCATATGATCAAGATACATTCAATAATTTTGGTTCACCAGGTGA
ATATTTAAAATTTGAAGAAGCAGAATTTTTAGAAAATGTTCACAGTTATA
ATCCAACCTTTGATTATGTTGCACCAGATCTCGTTAGTTTATTCATAACA
AATATAGGTGGTCATAATCCATCCTATATCTATCGTTTACTTCAAGAATA
TTATGATGCTAGAGATATTTTAGAAGATGAATAAAATAAAATAAAATAAA
AATAAATAAAAATTTTTTTTTAAAAAAAAAAAAAA

Gap no gap
Contig length 1785
Chromosome number (1..6, M) 6
Chromosome length 3595308
Start point 40791
End point 39631
Strand (PLUS/MINUS) MINUS
Number of clones 4
Number of EST 6
Link to clone list U15074
List of clone(s)

est1=CHD512F,1,604
est2=SFF154F,19,150
est3=SFF154X,215,1214
est4=SSD780Z,1126,1778
est5=SFF154Z,1222,1739
est6=SSL391Z,1490,1785
Translated Amino Acid sequence
kifynnrnigillllllidkkkngetsgktiretiriiyitfkeknscwiissikslcri
t*tmgt*r*mgkckiid*snqnnw*kvnecttirilyw*hs*ksiiyn*rrifnif*k*k
ewfk***l****f*nyyq**qqqq****y*****yq*k**i**cyvtrrsn**srryrfh
*nipkikscnhg*yq*in**irrss*kcc*tsn*tysfk*nhhdfrlfknr*RILKRSNA
KSLIDQIKIIGKKLMNAXPLEFCIGNIVRRVLFIIREEYLTFFRNKKNGLNNDDYDDDDF
ETTTSNNNNNNNNNNINSSSNINKNNKYSNVMLQDDPIDDQEDIDFTETFPRLKAAIMDS
INELIDELEGLHRNVAEQAIEHIHSNETIMTLGCSRTVEEFLKEAARKRSFKVIVVETAP
SLEGQKTAISLSKASIDTTLITDSAVFAMMSRVNKVIIGTHAVMANGGLIATSGTHTLAV
AAKYHSVPIVVCTGLYKLCPLYAYDQDTFNNFGSPGEYLKFEEAEFLENVHSYNPTFDYV
APDLVSLFITNIGGHNPSYIYRLLQEYYDARDILEDE*nkik*k*ikiff*kkkk


Translated Amino Acid sequence (All Frames)
Frame A:
kifynnrnigillllllidkkkngetsgktiretiriiyitfkeknscwiissikslcri
t*tmgt*r*mgkckiid*snqnnw*kvnecttirilyw*hs*ksiiyn*rrifnif*k*k
ewfk***l****f*nyyq**qqqq****y*****yq*k**i**cyvtrrsn**srryrfh
*nipkikscnhg*yq*in**irrss*kcc*tsn*tysfk*nhhdfrlfknr*RILKRSNA
KSLIDQIKIIGKKLMNAXPLEFCIGNIVRRVLFIIREEYLTFFRNKKNGLNNDDYDDDDF
ETTTSNNNNNNNNNNINSSSNINKNNKYSNVMLQDDPIDDQEDIDFTETFPRLKAAIMDS
INELIDELEGLHRNVAEQAIEHIHSNETIMTLGCSRTVEEFLKEAARKRSFKVIVVETAP
SLEGQKTAISLSKASIDTTLITDSAVFAMMSRVNKVIIGTHAVMANGGLIATSGTHTLAV
AAKYHSVPIVVCTGLYKLCPLYAYDQDTFNNFGSPGEYLKFEEAEFLENVHSYNPTFDYV
APDLVSLFITNIGGHNPSYIYRLLQEYYDARDILEDE*nkik*k*ikiff*kkkk


Frame B:
kffitieilgyyyyyy**ikkrmekqaekqlekqlesfilhlkrktvvgsyqvsrasael
lrqwvhkgkwgnakslidqikiigkklmnaqplefcignivrrvlfiireeyltffrnkk
nglnnddyddddfetttsnnnnnnnnnninsssninknnkysnvmlqddpiddqedidft
etfprlkaaimdsinelideleglhrnvaeqaiehihsnetimtlgcsrtveeflkeamq
nh*liksk*lvks**mxxh*nfvlvt*leeyyl*lekni*hfleikrmv*immimmmmil
kllpvittttiiiiilivvvisikiinivmlcyktiqlmikkisislkhsqd*klqswiv
smn*lmn*kvfiemllnkqlnifiqmkps*l*vvqeplkns*kkllekevlkllllkllh
hlkvkkqqfhyqkhqsiqh*lqiqqylq*chvliklllvhmq*wpmvv*llplvhihwl*
llnitlyq*wfvlvfinsvhymhmikihsiilvhqvni*nlkkqnf*kmftviiqpliml
hqislvys*qi*vviihpisivyfknimmleif*kmnkik*nknk*kfffkkkk


Frame C:
nfl*q*kywdiiiiiinr*kkewrnkrknn*rnn*nhlyyi*rekqlldhikyqeplqny
ldngyikvngemqnh*liksk*lvks**mhnh*nfvlvt*leeyyl*lekni*hfleikr
mv*immimmmmilkllpvittttiiiiilivvvisikiinivmlcyktiqlmikkisisl
khsqd*klqswivsmn*lmn*kvfiemllnkqlnifiqmkps*l*vvqeplkns*kkqck
iid*snqnnw*kvnecxxirilyw*hs*ksiiyn*rrifnif*k*kewfk***l****f*
nyyq**qqqq****y*****yq*k**i**cyvtrrsn**srryrfh*nipkikscnhg*y
q*in**irrss*kcc*tsn*tysfk*nhhdfrlfknr*rilkrsc*kkkf*sycc*ncsi
t*rsknsnfiiksinryninyrfssicndvtc**syywytcsngqwwfncylwytyigcs
c*islctnsglywsl*tlsiici*sryiq*fwftr*ifki*rsrifrkcsql*snl*lcc
trsr*fihnkyrws*silylsftsril*c*ryfrr*ik*nkikinknfflkkkk


own update 2004. 6.23
Homology vs CSM-cDNA
Query= Contig-U15074-1 (Contig-U15074-1Q)
/CSM_Contig/Contig-U15074-1Q.Seq.d
(1785 letters)

Database: CSM
8402 sequences; 8,075,542 total letters


Score E
Sequences producing significant alignments: (bits) Value

Contig-U15074-1 (Contig-U15074-1Q) /CSM_Contig/Conti... 1465 0.0
Contig-U15711-1 (Contig-U15711-1Q) /CSM_Contig/Conti... 44 7e-04
Contig-U09225-1 (Contig-U09225-1Q) /CSM_Contig/Conti... 38 0.046
Contig-U04309-1 (Contig-U04309-1Q) /CSM_Contig/Conti... 38 0.046
Contig-U12474-1 (Contig-U12474-1Q) /CSM_Contig/Conti... 36 0.18
Contig-U10976-1 (Contig-U10976-1Q) /CSM_Contig/Conti... 36 0.18
Contig-U10026-1 (Contig-U10026-1Q) /CSM_Contig/Conti... 36 0.18
Contig-U09715-1 (Contig-U09715-1Q) /CSM_Contig/Conti... 36 0.18
Contig-U08694-1 (Contig-U08694-1Q) /CSM_Contig/Conti... 36 0.18
Contig-U16598-1 (Contig-U16598-1Q) /CSM_Contig/Conti... 34 0.71

>Contig-U15074-1 (Contig-U15074-1Q) /CSM_Contig/Contig-U15074-1Q.Seq.d
Length = 1785

Score = 1465 bits (739), Expect = 0.0
Identities = 739/739 (100%)
Strand = Plus / Plus


Query: 991 gttatgttacaagacgatccaattgatgatcaagaagatatcgatttcactgaaacattc 1050
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 991 gttatgttacaagacgatccaattgatgatcaagaagatatcgatttcactgaaacattc 1050


Query: 1051 ccaagattaaaagctgcaatcatggatagtatcaatgaattaattgatgaattagaaggt 1110
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1051 ccaagattaaaagctgcaatcatggatagtatcaatgaattaattgatgaattagaaggt 1110


Query: 1111 cttcatagaaatgttgctgaacaagcaattgaacatattcattcaaatgaaaccatcatg 1170
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1111 cttcatagaaatgttgctgaacaagcaattgaacatattcattcaaatgaaaccatcatg 1170


Query: 1171 actttaggttgttcaagaaccgttgaagaattcttaaaagaagctgctagaaaaagaagt 1230
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1171 actttaggttgttcaagaaccgttgaagaattcttaaaagaagctgctagaaaaagaagt 1230


Query: 1231 tttaaagttattgttgttgaaactgctccatcacttgaaggtcaaaaaacagcaatttca 1290
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1231 tttaaagttattgttgttgaaactgctccatcacttgaaggtcaaaaaacagcaatttca 1290


Query: 1291 ttatcaaaagcatcaatcgatacaacattaattacagattcagcagtatttgcaatgatg 1350
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1291 ttatcaaaagcatcaatcgatacaacattaattacagattcagcagtatttgcaatgatg 1350


Query: 1351 tcacgtgttaataaagttattattggtacacatgcagtaatggccaatggtggtttaatt 1410
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1351 tcacgtgttaataaagttattattggtacacatgcagtaatggccaatggtggtttaatt 1410


Query: 1411 gctacctctggtacacatacattggctgtagctgctaaatatcactctgtaccaatagtg 1470
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1411 gctacctctggtacacatacattggctgtagctgctaaatatcactctgtaccaatagtg 1470


Query: 1471 gtttgtactggtctttataaactctgtccattatatgcatatgatcaagatacattcaat 1530
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1471 gtttgtactggtctttataaactctgtccattatatgcatatgatcaagatacattcaat 1530


Query: 1531 aattttggttcaccaggtgaatatttaaaatttgaagaagcagaatttttagaaaatgtt 1590
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1531 aattttggttcaccaggtgaatatttaaaatttgaagaagcagaatttttagaaaatgtt 1590


Query: 1591 cacagttataatccaacctttgattatgttgcaccagatctcgttagtttattcataaca 1650
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1591 cacagttataatccaacctttgattatgttgcaccagatctcgttagtttattcataaca 1650


Query: 1651 aatataggtggtcataatccatcctatatctatcgtttacttcaagaatattatgatgct 1710
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1651 aatataggtggtcataatccatcctatatctatcgtttacttcaagaatattatgatgct 1710


Query: 1711 agagatattttagaagatg 1729
|||||||||||||||||||
Sbjct: 1711 agagatattttagaagatg 1729


Score = 769 bits (388), Expect = 0.0
Identities = 394/394 (100%)
Strand = Plus / Plus


Query: 481 atatagtaatgttatgttacaagacgatccaattgatgatcaagaagatatcgatttcac 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 atatagtaatgttatgttacaagacgatccaattgatgatcaagaagatatcgatttcac 540


Query: 541 tgaaacattcccaagattaaaagctgcaatcatggatagtatcaatgaattaattgatga 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 tgaaacattcccaagattaaaagctgcaatcatggatagtatcaatgaattaattgatga 600


Query: 601 attagaaggtcttcatagaaatgttgctgaacaagcaattgaacatattcattcaaatga 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 attagaaggtcttcatagaaatgttgctgaacaagcaattgaacatattcattcaaatga 660


Query: 661 aaccatcatgactttaggttgttcaagaaccgttgaagaattcttaaaagaagcaatgca 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 aaccatcatgactttaggttgttcaagaaccgttgaagaattcttaaaagaagcaatgca 720


Query: 721 aaatcattgattgatcaaatcaaaataattggtaaaaagttaatgaatgcncanccatta 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 aaatcattgattgatcaaatcaaaataattggtaaaaagttaatgaatgcncanccatta 780


Query: 781 gaattttgtattggtaacatagttagaagagtattatttataattagagaagaatattta 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 gaattttgtattggtaacatagttagaagagtattatttataattagagaagaatattta 840


Query: 841 acattttttagaaataaaaagaatggtttaaata 874
||||||||||||||||||||||||||||||||||
Sbjct: 841 acattttttagaaataaaaagaatggtttaaata 874


Score = 613 bits (309), Expect = e-175
Identities = 309/309 (100%)
Strand = Plus / Plus


Query: 66 gaatggagaaacaagcggaaaaacaattagagaaacaattagaatcatttatattacatt 125
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 66 gaatggagaaacaagcggaaaaacaattagagaaacaattagaatcatttatattacatt 125


Query: 126 taaagagaaaaacagttgttggatcatatcaagtatcaagagcctctgcagaattactta 185
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 126 taaagagaaaaacagttgttggatcatatcaagtatcaagagcctctgcagaattactta 185


Query: 186 gacaatgggtacataaaggtaaatggggaaatgcaaaatcattgattgatcaaatcaaaa 245
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 186 gacaatgggtacataaaggtaaatggggaaatgcaaaatcattgattgatcaaatcaaaa 245


Query: 246 taattggtaaaaagttaatgaatgcacaaccattagaattttgtattggtaacatagtta 305
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 246 taattggtaaaaagttaatgaatgcacaaccattagaattttgtattggtaacatagtta 305


Query: 306 gaagagtattatttataattagagaagaatatttaacattttttagaaataaaaagaatg 365
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 306 gaagagtattatttataattagagaagaatatttaacattttttagaaataaaaagaatg 365


Query: 366 gtttaaata 374
|||||||||
Sbjct: 366 gtttaaata 374


Score = 464 bits (234), Expect = e-130
Identities = 234/234 (100%)
Strand = Plus / Plus


Query: 481 atatagtaatgttatgttacaagacgatccaattgatgatcaagaagatatcgatttcac 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 981 atatagtaatgttatgttacaagacgatccaattgatgatcaagaagatatcgatttcac 1040


Query: 541 tgaaacattcccaagattaaaagctgcaatcatggatagtatcaatgaattaattgatga 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1041 tgaaacattcccaagattaaaagctgcaatcatggatagtatcaatgaattaattgatga 1100


Query: 601 attagaaggtcttcatagaaatgttgctgaacaagcaattgaacatattcattcaaatga 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1101 attagaaggtcttcatagaaatgttgctgaacaagcaattgaacatattcattcaaatga 1160


Query: 661 aaccatcatgactttaggttgttcaagaaccgttgaagaattcttaaaagaagc 714
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1161 aaccatcatgactttaggttgttcaagaaccgttgaagaattcttaaaagaagc 1214


Score = 444 bits (224), Expect = e-124
Identities = 224/224 (100%)
Strand = Plus / Plus


Query: 991 gttatgttacaagacgatccaattgatgatcaagaagatatcgatttcactgaaacattc 1050
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 491 gttatgttacaagacgatccaattgatgatcaagaagatatcgatttcactgaaacattc 550


Query: 1051 ccaagattaaaagctgcaatcatggatagtatcaatgaattaattgatgaattagaaggt 1110
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 551 ccaagattaaaagctgcaatcatggatagtatcaatgaattaattgatgaattagaaggt 610


Query: 1111 cttcatagaaatgttgctgaacaagcaattgaacatattcattcaaatgaaaccatcatg 1170
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 611 cttcatagaaatgttgctgaacaagcaattgaacatattcattcaaatgaaaccatcatg 670


Query: 1171 actttaggttgttcaagaaccgttgaagaattcttaaaagaagc 1214
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 671 actttaggttgttcaagaaccgttgaagaattcttaaaagaagc 714


Score = 305 bits (154), Expect = 1e-82
Identities = 158/160 (98%)
Strand = Plus / Plus


Query: 715 aatgcaaaatcattgattgatcaaatcaaaataattggtaaaaagttaatgaatgcncan 774
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 215 aatgcaaaatcattgattgatcaaatcaaaataattggtaaaaagttaatgaatgcacaa 274


Query: 775 ccattagaattttgtattggtaacatagttagaagagtattatttataattagagaagaa 834
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 275 ccattagaattttgtattggtaacatagttagaagagtattatttataattagagaagaa 334


Query: 835 tatttaacattttttagaaataaaaagaatggtttaaata 874
||||||||||||||||||||||||||||||||||||||||
Sbjct: 335 tatttaacattttttagaaataaaaagaatggtttaaata 374


Score = 305 bits (154), Expect = 1e-82
Identities = 158/160 (98%)
Strand = Plus / Plus


Query: 215 aatgcaaaatcattgattgatcaaatcaaaataattggtaaaaagttaatgaatgcacaa 274
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 715 aatgcaaaatcattgattgatcaaatcaaaataattggtaaaaagttaatgaatgcncan 774


Query: 275 ccattagaattttgtattggtaacatagttagaagagtattatttataattagagaagaa 334
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 775 ccattagaattttgtattggtaacatagttagaagagtattatttataattagagaagaa 834


Query: 335 tatttaacattttttagaaataaaaagaatggtttaaata 374
||||||||||||||||||||||||||||||||||||||||
Sbjct: 835 tatttaacattttttagaaataaaaagaatggtttaaata 874


Score = 61.9 bits (31), Expect = 3e-09
Identities = 31/31 (100%)
Strand = Plus / Plus


Query: 1 aaaattttttataacaatagaaatattggga 31
|||||||||||||||||||||||||||||||
Sbjct: 1 aaaattttttataacaatagaaatattggga 31


Score = 34.2 bits (17), Expect = 0.71
Identities = 17/17 (100%)
Strand = Plus / Plus


Query: 898 tttgaaactactaccag 914
|||||||||||||||||
Sbjct: 898 tttgaaactactaccag 914


Score = 34.2 bits (17), Expect = 0.71
Identities = 17/17 (100%)
Strand = Plus / Plus


Query: 898 tttgaaactactaccag 914
|||||||||||||||||
Sbjct: 398 tttgaaactactaccag 414


Score = 32.2 bits (16), Expect = 2.8
Identities = 16/16 (100%)
Strand = Plus / Plus


Query: 398 tttgaaactactacca 413
||||||||||||||||
Sbjct: 898 tttgaaactactacca 913


Score = 32.2 bits (16), Expect = 2.8
Identities = 16/16 (100%)
Strand = Plus / Plus


Query: 398 tttgaaactactacca 413
||||||||||||||||
Sbjct: 398 tttgaaactactacca 413


>Contig-U15711-1 (Contig-U15711-1Q) /CSM_Contig/Contig-U15711-1Q.Seq.d
Length = 2517

Score = 44.1 bits (22), Expect = 7e-04
Identities = 25/26 (96%)
Strand = Plus / Plus


Query: 632 caagcaattgaacatattcattcaaa 657
||||||||| ||||||||||||||||
Sbjct: 1553 caagcaattaaacatattcattcaaa 1578


Score = 44.1 bits (22), Expect = 7e-04
Identities = 25/26 (96%)
Strand = Plus / Plus


Query: 1132 caagcaattgaacatattcattcaaa 1157
||||||||| ||||||||||||||||
Sbjct: 1553 caagcaattaaacatattcattcaaa 1578


>Contig-U09225-1 (Contig-U09225-1Q) /CSM_Contig/Contig-U09225-1Q.Seq.d
Length = 851

Score = 38.2 bits (19), Expect = 0.046
Identities = 22/23 (95%)
Strand = Plus / Plus


Query: 736 caaatcaaaataattggtaaaaa 758
||||||||| |||||||||||||
Sbjct: 793 caaatcaaattaattggtaaaaa 815


Score = 38.2 bits (19), Expect = 0.046
Identities = 22/23 (95%)
Strand = Plus / Plus


Query: 236 caaatcaaaataattggtaaaaa 258
||||||||| |||||||||||||
Sbjct: 793 caaatcaaattaattggtaaaaa 815


Database: CSM
Posted date: Jun 21, 2004 1:35 PM
Number of letters in database: 8,075,542
Number of sequences in database: 8402

Lambda K H
1.37 0.711 1.31

Gapped
Lambda K H
1.37 0.711 1.31


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 32,863
Number of Sequences: 8402
Number of extensions: 32863
Number of successful extensions: 3664
Number of sequences better than 10.0: 98
length of query: 1785
length of database: 8,075,542
effective HSP length: 17
effective length of query: 1768
effective length of database: 7,932,708
effective search space: 14025027744
effective search space used: 14025027744
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 16 (32.2 bits)
dna update 2009. 1.11
Homology vs DNA
Query= Contig-U15074-1 (Contig-U15074-1Q) /CSM_Contig/Contig-U15074-1Q.Seq.d
(1785 letters)

Database: ddbj_A
92,845,959 sequences; 95,242,211,685 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value N

(AU037554) Dictyostelium discoideum slug cDNA, clone SSD780. 1193 0.0 1
(BJ398245) Dictyostelium discoideum cDNA clone:dds11k13, 3' ... 801 0.0 3
(BJ363906) Dictyostelium discoideum cDNA clone:ddc29g03, 5' ... 613 0.0 4
(AU038719) Dictyostelium discoideum slug cDNA, clone SSL391. 476 e-129 1
(BJ386964) Dictyostelium discoideum cDNA clone:dds11k13, 5' ... 168 1e-37 2
(DR396018) USDA-FP_155953 Adult Alate Aphis gossypii (WHAGA)... 50 2e-05 2
(EE571118) D04_D04fv3j8_pDNRf_531155 Myzus persicae, line F0... 46 3e-04 2
(EE570987) C04_C04fv2f7_pDNRf_530674 Myzus persicae, line F0... 46 3e-04 2
(DW013206) w1h19_M13F Myzus persicae, tobacco lineage, whole... 46 3e-04 2
(EX650406) 256739092 Pea aphid whole body normalized full le... 46 3e-04 2
(EX637807) 256615526 Pea aphid whole body normalized full le... 46 3e-04 2
(FF317820) 280394248 Pea aphid whole body normalized full le... 46 3e-04 2
(ES220993) MpGV_ag2_D16 Myzus persicae, line G006, PLRV infe... 46 3e-04 2
(ES217769) MpFVN_ag1_M22 Myzus persicae, line F001, PLRV fre... 46 3e-04 2
(EB749739) 987977 JF06 Tribolium castaneum cDNA clone 500000... 60 3e-04 1
(DN649417) G6706.29 Exelixis Tribolium castaneum cDNA Librar... 60 3e-04 1
(CK810625) Rasgsc5660 Salivary Gland 4th instar 3rd period (... 60 3e-04 1
(CK260982) EST707060 potato abiotic stress cDNA library Sola... 42 9e-04 3
(FF611435) G825P5160RB1.T0 Acorn worm normalized gastrula pE... 58 0.001 1
(FF611434) G825P5160FB1.T0 Acorn worm normalized gastrula pE... 58 0.001 1
(FF604950) G825P5119FC9.T0 Acorn worm normalized gastrula pE... 58 0.001 1
(ES221397) MpGV_ag3_G23 Myzus persicae, line G006, PLRV infe... 46 0.004 2
(CP000942) Ureaplasma parvum serovar 3 str. ATCC 27815, comp... 32 0.005 19
(BW219151) Ciona intestinalis cDNA, clone:cieg095g15, 5' end... 46 0.008 2
(BW213497) Ciona intestinalis cDNA, clone:cieg073m04, 5' end... 46 0.008 2
(BW442032) Ciona intestinalis cDNA, clone:cijv051i14, 5'end,... 46 0.008 2
(EH695346) CCIM7200.b1_O24.ab1 CCI(LMS) chicory Cichorium in... 50 0.008 2
(FF883860) CBWU22711.b1 Yutaka Satou unpublished cDNA librar... 46 0.009 2
(AE009951) Fusobacterium nucleatum subsp. nucleatum ATCC 255... 34 0.014 23
(FC374579) CAYY9317.rev CAYY Physcomitrella patens subsp. pa... 40 0.029 2
(BJ956749) Physcomitrella patens subsp. patens cDNA clone:pp... 40 0.029 2
(AM664348) Entamoeba moshkovskii FIC GSS, clone mosh049d06.p1k. 40 0.029 2
(FC788960) CBGC19410.fwd CBGC Lottia gigantea 15h 18h embryo... 50 0.034 2
(FD457358) EGGBD45TR Haematobia irritans eggs Haematobia irr... 52 0.043 2
(FD455186) EGGAZ95TR Haematobia irritans eggs Haematobia irr... 52 0.043 2
(FD457560) EGGBE75TR Haematobia irritans eggs Haematobia irr... 52 0.044 2
(DW275561) UI-S-GU0-adc-a-12-0-UI.s1 UI-S-GU0 Euprymna scolo... 52 0.074 1
(DW259044) UI-S-GG1-aaz-k-04-0-UI.s1 UI-S-GG1 Euprymna scolo... 52 0.074 1
(CX054278) tai97c11.y2 Hydra EST UCI 5 ALP Hydra magnipapill... 52 0.074 1
(CN553789) tae28f04.y1 Hydra EST Darmstadt I Hydra magnipapi... 52 0.074 1
(FD456344) EGGB717TR Haematobia irritans eggs Haematobia irr... 52 0.074 1
(FD456343) EGGB717TF Haematobia irritans eggs Haematobia irr... 52 0.074 1
(AC068603) Homo sapiens chromosome 15 clone CTD-2529A19 map ... 42 0.080 3
(CW211164) 104_641_11190170_116_37009_001 Sorghum methylatio... 38 0.11 2
(CU426353) Clytia hemisphaerica 5-PRIME EST from clone SA0AA... 44 0.13 2
(AW944719) EST336769 tomato flower buds 3-8 mm, Cornell Univ... 42 0.17 3
(AC187922) Cavia porcellus clone CH234-491M17, WORKING DRAFT... 44 0.20 4
(EY314147) CAWX25344.fwd CAWX Helobdella robusta Primary Ear... 36 0.28 3
(FD442159) Atr02b_135_E03_C011.g1 FGP Female Amborella trich... 42 0.29 3
(FD439442) Atr02b_88_F08_C011.g1 FGP Female Amborella tricho... 42 0.29 3
(EJ960046) 1093018997696 Global-Ocean-Sampling_GS-30-02-01-1... 50 0.29 1
(EJ777961) 1093010957126 Global-Ocean-Sampling_GS-30-02-01-1... 50 0.29 1
(EJ765163) 1092963195696 Global-Ocean-Sampling_GS-30-02-01-1... 50 0.29 1
(EJ720700) 1092959449746 Global-Ocean-Sampling_GS-30-02-01-1... 50 0.29 1
(EL359014) CCEM3849.b1_A03.ab1 CCE(LMS) endive Cichorium end... 50 0.29 1
(EL348717) CCEL4815.b1_M04.ab1 CCE(LMS) endive Cichorium end... 50 0.29 1
(EH699910) CCIS12122.b1_C08.ab1 CCI(LMS) chicory Cichorium i... 50 0.29 1
(BW438378) Ciona intestinalis cDNA, clone:cijv401i14, 5'end,... 46 0.41 2
(FF790278) XABT86266.fwd Gateway compatible cien cDNA librar... 40 0.41 2
(FF803319) XABT94923.fwd Gateway compatible cien cDNA librar... 40 0.43 2
(CP000485) Bacillus thuringiensis str. Al Hakam, complete ge... 40 0.45 23
(FF727672) XABT42923.fwd Gateway compatible cien cDNA librar... 40 0.49 2
(AE002103) Ureaplasma parvum serovar 3 str. ATCC 700970 sect... 34 0.60 5
(CP000001) Bacillus cereus E33L, complete genome. 40 0.69 24
(AC230015) Zea mays chromosome 3 clone CH201-55F7; ZMMBBc005... 38 0.75 7
(EY216525) PRAG-aab37f10.b1 Sand_fly_EST_Normalized Phleboto... 34 0.83 2
(EY204979) PRAG-aaa45c07.b1 Sand_fly_EST_Normalized Phleboto... 34 0.83 2
(EY209292) PRAG-aaa60f03.b1 Sand_fly_EST_Normalized Phleboto... 34 0.84 2
(CU329670) Schizosaccharomyces pombe chromosome I. 48 1.2 1
(CU856230) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 48 1.2 1
(CA860319) EST634813 GVSP Glomus versiforme cDNA clone pGVSP... 48 1.2 1
(FK669328) 482 cowpea buchid larval midgut cDNA library Call... 48 1.2 1
(CP001080) Sulfurihydrogenibium sp. YO3AOP1, complete genome. 48 1.2 1
(EC822300) SME00009010 esmbsro2 Sawyeria marylandensis cDNA,... 36 1.4 2
(EC822653) SME00008922 esmbsro2 Sawyeria marylandensis cDNA,... 36 1.4 2
(EC823926) SME00007649 esmbsro2 Sawyeria marylandensis cDNA,... 36 1.4 2
(FD433041) Atr01b_140_F06_C010.g1 FGP Male Amborella trichop... 40 1.6 2
(EX638837) 256621598 Pea aphid whole body normalized full le... 46 1.6 2
(EX633568) 256589464 Pea aphid whole body normalized full le... 46 1.7 2
(FC691191) CAXX2430.rev CAXX Lottia gigantea from male gonad... 46 1.8 2
(EC388646) D09_D09gm4f18_pDNRf_491655 Myzus persicae, line G... 46 1.8 2
(AC203795) Zea mays chromosome 8 clone ZMMBBb-90O18; ZMMBBb0... 42 1.9 3
(EX281486) 1568458_5_H16_058 PY06 Carica papaya cDNA, mRNA s... 38 2.0 2
(AC091371) Rattus norvegicus clone CH230-1C23, *** SEQUENCIN... 32 2.1 2
(AC120619) Rattus norvegicus clone CH230-40H14, *** SEQUENCI... 32 2.2 2
(AC091336) Rattus norvegicus BAC CH230-1C6 (Children's Hosp... 32 2.3 2
(AC106459) Rattus norvegicus clone CH230-207G10, WORKING DRA... 32 2.3 2
(CP000903) Bacillus weihenstephanensis KBAB4, complete genome. 42 2.6 23
(AC115683) Dictyostelium discoideum chromosome 2 map complem... 34 2.7 7
(AC147141) Mus musculus BAC clone RP24-244J6 from chromosome... 40 2.8 3
(DT803828) 107627245 TL1 Tribolium castaneum cDNA clone 1C5 ... 36 2.8 2
(AE017308) Mycoplasma mobile 163K complete genome. 32 2.9 24
(AE014847) Plasmodium falciparum 3D7 chromosome 12, section ... 34 3.2 10
(CU746701) A BAC library has been constructed from PN40024 g... 34 3.3 3
(AC198938) Zea mays chromosome unknown clone CH201-95M16; ZM... 38 3.5 5
(CR382370) Zebrafish DNA sequence from clone DKEY-22O12 in l... 46 4.6 1
(CR382335) Zebrafish DNA sequence from clone DKEY-56I16 in l... 46 4.6 1
(BC119115) Mus musculus olfactory receptor 1270, mRNA (cDNA ... 46 4.6 1
(BC119113) Mus musculus olfactory receptor 1270, mRNA (cDNA ... 46 4.6 1
(AY318474) Mus musculus olfactory receptor Olfr1270 (Olfr127... 46 4.6 1

>(AU037554) Dictyostelium discoideum slug cDNA, clone SSD780.
Length = 653

Score = 1193 bits (602), Expect = 0.0
Identities = 602/602 (100%)
Strand = Plus / Plus


Query: 1128 tgaacaagcaattgaacatattcattcaaatgaaaccatcatgactttaggttgttcaag 1187
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3 tgaacaagcaattgaacatattcattcaaatgaaaccatcatgactttaggttgttcaag 62


Query: 1188 aaccgttgaagaattcttaaaagaagctgctagaaaaagaagttttaaagttattgttgt 1247
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 63 aaccgttgaagaattcttaaaagaagctgctagaaaaagaagttttaaagttattgttgt 122


Query: 1248 tgaaactgctccatcacttgaaggtcaaaaaacagcaatttcattatcaaaagcatcaat 1307
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123 tgaaactgctccatcacttgaaggtcaaaaaacagcaatttcattatcaaaagcatcaat 182


Query: 1308 cgatacaacattaattacagattcagcagtatttgcaatgatgtcacgtgttaataaagt 1367
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 183 cgatacaacattaattacagattcagcagtatttgcaatgatgtcacgtgttaataaagt 242


Query: 1368 tattattggtacacatgcagtaatggccaatggtggtttaattgctacctctggtacaca 1427
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 243 tattattggtacacatgcagtaatggccaatggtggtttaattgctacctctggtacaca 302


Query: 1428 tacattggctgtagctgctaaatatcactctgtaccaatagtggtttgtactggtcttta 1487
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 303 tacattggctgtagctgctaaatatcactctgtaccaatagtggtttgtactggtcttta 362


Query: 1488 taaactctgtccattatatgcatatgatcaagatacattcaataattttggttcaccagg 1547
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 363 taaactctgtccattatatgcatatgatcaagatacattcaataattttggttcaccagg 422


Query: 1548 tgaatatttaaaatttgaagaagcagaatttttagaaaatgttcacagttataatccaac 1607
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 423 tgaatatttaaaatttgaagaagcagaatttttagaaaatgttcacagttataatccaac 482


Query: 1608 ctttgattatgttgcaccagatctcgttagtttattcataacaaatataggtggtcataa 1667
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 483 ctttgattatgttgcaccagatctcgttagtttattcataacaaatataggtggtcataa 542


Query: 1668 tccatcctatatctatcgtttacttcaagaatattatgatgctagagatattttagaaga 1727
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 543 tccatcctatatctatcgtttacttcaagaatattatgatgctagagatattttagaaga 602


Query: 1728 tg 1729
||
Sbjct: 603 tg 604

Score = 172 bits (87), Expect = 3e-38
Identities = 87/87 (100%)
Strand = Plus / Plus


Query: 628 tgaacaagcaattgaacatattcattcaaatgaaaccatcatgactttaggttgttcaag 687
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3 tgaacaagcaattgaacatattcattcaaatgaaaccatcatgactttaggttgttcaag 62


Query: 688 aaccgttgaagaattcttaaaagaagc 714
|||||||||||||||||||||||||||
Sbjct: 63 aaccgttgaagaattcttaaaagaagc 89

Lambda K H
1.37 0.711 1.31

Matrix: blastn matrix:1 -3
Number of Sequences: 92845959
Number of Hits to DB: 1,957,404,249
Number of extensions: 121117185
Number of successful extensions: 10273764
Number of sequences better than 10.0: 187
Length of query: 1785
Length of database: 95,242,211,685
Length adjustment: 24
Effective length of query: 1761
Effective length of database: 97,308,875,965
Effective search space: 171360930574365
Effective search space used: 171360930574365
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)

protein update 2009. 7.14
Homology vs Protein
Query= Contig-U15074-1 (Contig-U15074-1Q) /CSM_Contig/Contig-U15074-1Q.Seq.d
(1785 letters)

Database: nrp_B
3,236,559 sequences; 1,051,180,864 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value

(Q54EY2) RecName: Full=Translation initiation factor eIF-2B subu... 563 e-159
BC067147_1(BC067147|pid:none) Danio rerio eukaryotic translation... 271 6e-71
DQ214062_1(DQ214062|pid:none) Taeniopygia guttata clone 0063P000... 271 6e-71
DQ891364_1(DQ891364|pid:none) Synthetic construct clone IMAGE:10... 270 1e-70
BC000494_1(BC000494|pid:none) Homo sapiens eukaryotic translatio... 269 3e-70
(P49770) RecName: Full=Translation initiation factor eIF-2B subu... 269 3e-70
(Q5E9B4) RecName: Full=Translation initiation factor eIF-2B subu... 268 5e-70
AB170077_1(AB170077|pid:none) Macaca fascicularis brain cDNA clo... 265 3e-69
BC088515_1(BC088515|pid:none) Xenopus tropicalis eukaryotic tran... 265 4e-69
BC070506_1(BC070506|pid:none) Rattus norvegicus eukaryotic trans... 265 4e-69
U83914_1(U83914|pid:none) Rattus norvegicus eukaryotic initiatio... 264 7e-69
AC012395_3(AC012395|pid:none) Arabidopsis thaliana chromosome II... 231 5e-59
AK317423_1(AK317423|pid:none) Arabidopsis thaliana AT3G07300 mRN... 231 7e-59
AK318920_1(AK318920|pid:none) Arabidopsis thaliana AT3G07300 mRN... 231 7e-59
AK226859_1(AK226859|pid:none) Arabidopsis thaliana mRNA for puta... 231 7e-59
AF137288_1(AF137288|pid:none) Nicotiana tabacum putative transla... 227 9e-58
AP008216_510(AP008216|pid:none) Oryza sativa (japonica cultivar-... 224 6e-57
EU963177_1(EU963177|pid:none) Zea mays clone 258754 translation ... 221 7e-56
AE014298_462(AE014298|pid:none) Drosophila melanogaster chromoso... 216 3e-54
AM920431_262(AM920431|pid:none) Penicillium chrysogenum Wisconsi... 207 1e-51
AP007161_781(AP007161|pid:none) Aspergillus oryzae RIB40 genomic... 203 1e-50
AE017352_242(AE017352|pid:none) Cryptococcus neoformans var. neo... 201 7e-50
AE017352_243(AE017352|pid:none) Cryptococcus neoformans var. neo... 196 2e-48
L40395_1(L40395|pid:none) Homo sapiens (clone S20iii15) mRNA, 3'... 190 2e-46
BC041556_1(BC041556|pid:none) Xenopus laevis eukaryotic translat... 184 1e-44
CP001327_370(CP001327|pid:none) Micromonas sp. RCC299 chromosome... 176 2e-42
CP000498_641(CP000498|pid:none) Pichia stipitis CBS 6054 chromos... 176 2e-42
AC009853_1(AC009853|pid:none) Arabidopsis thaliana chromosome II... 176 3e-42
AK319053_1(AK319053|pid:none) Arabidopsis thaliana AT3G07300 mRN... 175 4e-42
CR382136_467(CR382136|pid:none) Debaryomyces hansenii strain CBS... 170 1e-40
CR382132_1012(CR382132|pid:none) Yarrowia lipolytica strain CLIB... 167 1e-39
FM992689_365(FM992689|pid:none) Candida dubliniensis CD36 chromo... 165 6e-39
CR382123_218(CR382123|pid:none) Kluyveromyces lactis strain NRRL... 144 8e-33
CR382121_183(CR382121|pid:none) Kluyveromyces lactis strain NRRL... 144 1e-32
(P32502) RecName: Full=Translation initiation factor eIF-2B subu... 143 2e-32
AE016820_661(AE016820|pid:none) Ashbya gossypii (= Eremothecium ... 143 2e-32
CR380953_410(CR380953|pid:none) Candida glabrata strain CBS138 c... 142 4e-32
AC159435_24(AC159435|pid:none) Trypanosoma brucei chromosome 8 c... 139 3e-31
CP000593_90(CP000593|pid:none) Ostreococcus lucimarinus CCE9901 ... 138 6e-31
FN357316_26(FN357316|pid:none) Schistosoma mansoni genome sequen... 138 8e-31
CU928176_629(CU928176|pid:none) Zygosaccharomyces rouxii strain ... 137 1e-30
CT005249_104(CT005249|pid:none) Leishmania major strain Friedlin... 134 1e-29
BX294024_28(BX294024|pid:none) Neurospora crassa DNA linkage gro... 121 1e-25
CU640366_1350(CU640366|pid:none) Podospora anserina genomic DNA ... 120 1e-25
AE014188_481(AE014188|pid:none) Plasmodium falciparum 3D7 chromo... 117 1e-24
BX276101_4(BX276101|pid:none) Zebrafish DNA sequence from clone ... 111 8e-23
BC121465_1(BC121465|pid:none) Xenopus tropicalis eukaryotic tran... 109 4e-22
BC122497_1(BC122497|pid:none) Xenopus laevis hypothetical LOC496... 109 4e-22
BC088810_1(BC088810|pid:none) Xenopus laevis hypothetical LOC496... 109 4e-22
BC106221_1(BC106221|pid:none) Xenopus laevis hypothetical LOC496... 109 4e-22
AL050109_1(AL050109|pid:none) Homo sapiens mRNA; cDNA DKFZp586J0... 105 4e-21
(Q9UI10) RecName: Full=Translation initiation factor eIF-2B subu... 105 4e-21
AJ011306_1(AJ011306|pid:none) Homo sapiens mRNA for guanine nucl... 105 4e-21
AJ011305_1(AJ011305|pid:none) Homo sapiens mRNA for guanine nucl... 105 4e-21
AK158282_1(AK158282|pid:none) Mus musculus adult inner ear cDNA,... 103 2e-20
A55146(A55146;B55146)guanine nucleotide exchange factor eIF-2B d... 103 2e-20
M98035_1(M98035|pid:none) Mus musculus guanine nucleotide exchan... 103 2e-20
AF112207_1(AF112207|pid:none) Homo sapiens translation initiatio... 103 3e-20
X75451_1(X75451|pid:none) O.cuniculus mRNA for translation initi... 102 6e-20
(P41111) RecName: Full=Translation initiation factor eIF-2B subu... 102 6e-20
AY541450_1(AY541450|pid:none) Fundulus heteroclitus translation ... 101 8e-20
AM114193_152(AM114193|pid:none) Uncultured methanogenic archaeon... 99 5e-19
AE013599_3812(AE013599|pid:none) Drosophila melanogaster chromos... 99 7e-19
AJ344149_1(AJ344149|pid:none) Drosophila melanogaster mRNA for e... 99 7e-19
BT078964_1(BT078964|pid:none) Esox lucius clone eluc-evq-518-278... 98 9e-19
CR858952_1(CR858952|pid:none) Pongo abelii mRNA; cDNA DKFZp469L0... 98 9e-19
BT058540_1(BT058540|pid:none) Salmo salar clone Contig1705 Trans... 98 1e-18
BT023760_1(BT023760|pid:none) Drosophila melanogaster RE55357 fu... 97 1e-18
BT067071_1(BT067071|pid:none) Zea mays full-length cDNA clone ZM... 97 2e-18
(Q4R4V8) RecName: Full=Translation initiation factor eIF-2B subu... 97 3e-18
(P14741) RecName: Full=Translation initiation factor eIF-2B subu... 95 1e-17
CP000855_1302(CP000855|pid:none) Thermococcus onnurineus NA1, co... 94 1e-17
BT050278_1(BT050278|pid:none) Salmo salar clone ssal-evf-504-047... 94 2e-17
(O57947) RecName: Full=Putative translation initiation factor eI... 94 2e-17
(O28242) RecName: Full=Putative translation initiation factor eI... 94 2e-17
CP001398_1634(CP001398|pid:none) Thermococcus gammatolerans EJ3,... 92 6e-17
BC068625_1(BC068625|pid:none) Xenopus laevis hypothetical protei... 92 6e-17
(Q54I81) RecName: Full=Translation initiation factor eIF-2B subu... 92 6e-17
CT978957_2(CT978957|pid:none) Zebrafish DNA sequence from clone ... 91 1e-16
AE009950_122(AE009950|pid:none) Pyrococcus furiosus DSM 3638, co... 91 1e-16
DQ645454_1(DQ645454|pid:none) Bombyx mori eIF2B-alpha protein mR... 91 1e-16
GM017008_297(GM017008|pid:none) Sequence 1838 from Patent EP1923... 89 4e-16
CR382131_5(CR382131|pid:none) Yarrowia lipolytica strain CLIB122... 89 4e-16
CP001140_456(CP001140|pid:none) Desulfurococcus kamchatkensis 12... 89 5e-16
AP008218_1378(AP008218|pid:none) Oryza sativa (japonica cultivar... 89 7e-16
AE016819_317(AE016819|pid:none) Ashbya gossypii (= Eremothecium ... 88 9e-16
AB005231_19(AB005231|pid:none) Arabidopsis thaliana genomic DNA,... 88 1e-15
AE014297_4666(AE014297|pid:none) Drosophila melanogaster chromos... 86 4e-15
BT077587_1(BT077587|pid:none) Lepeophtheirus salmonis Pacific fo... 86 4e-15
CR382129_672(CR382129|pid:none) Yarrowia lipolytica strain CLIB1... 86 6e-15
CU928178_68(CU928178|pid:none) Zygosaccharomyces rouxii strain C... 86 6e-15
CU928175_734(CU928175|pid:none) Zygosaccharomyces rouxii strain ... 85 8e-15
CP000505_383(CP000505|pid:none) Thermofilum pendens Hrk 5, compl... 85 8e-15
AC004005_21(AC004005|pid:none) Arabidopsis thaliana chromosome 2... 85 8e-15
AC016041_24(AC016041|pid:none) Genomic sequence for Arabidopsis ... 84 1e-14
(Q9USP0) RecName: Full=Translation initiation factor eIF-2B subu... 84 2e-14
AY062581_1(AY062581|pid:none) Arabidopsis thaliana putative tran... 84 2e-14
(Q57586) RecName: Full=Putative translation initiation factor eI... 83 3e-14
CP000743_664(CP000743|pid:none) Methanococcus aeolicus Nankai-3,... 82 5e-14
AC009324_11(AC009324|pid:none) Arabidopsis thaliana chromosome I... 82 5e-14
AE017347_143(AE017347|pid:none) Cryptococcus neoformans var. neo... 82 6e-14
AE016818_24(AE016818|pid:none) Ashbya gossypii (= Eremothecium g... 82 6e-14
CP000300_1795(CP000300|pid:none) Methanococcoides burtonii DSM 6... 82 8e-14
CP000575_1334(CP000575|pid:none) Staphylothermus marinus F1, com... 81 1e-13
AC183502_19(AC183502|pid:none) Medicago truncatula clone mth2-75... 81 1e-13
AK220696_1(AK220696|pid:none) Arabidopsis thaliana mRNA for puta... 80 2e-13
AE004437_1415(AE004437|pid:none) Halobacterium sp. NRC-1, comple... 80 2e-13
AP008218_898(AP008218|pid:none) Oryza sativa (japonica cultivar-... 80 3e-13
CP001575_528(CP001575|pid:none) Micromonas sp. RCC299 chromosome... 79 5e-13
AE010299_377(AE010299|pid:none) Methanosarcina acetivorans str. ... 79 7e-13
AK340886_1(AK340886|pid:none) Acyrthosiphon pisum ACYPI007014 mR... 79 7e-13
EU965184_1(EU965184|pid:none) Zea mays clone 284346 translation ... 78 9e-13
CP000559_553(CP000559|pid:none) Methanocorpusculum labreanum Z, ... 78 1e-12
CU928170_457(CU928170|pid:none) Kluyveromyces thermotolerans str... 78 1e-12
CP000099_776(CP000099|pid:none) Methanosarcina barkeri str. Fusa... 77 2e-12
AE008384_1606(AE008384|pid:none) Methanosarcina mazei strain Goe... 77 2e-12
CP000505_384(CP000505|pid:none) Thermofilum pendens Hrk 5, compl... 77 2e-12
CR936257_1594(CR936257|pid:none) Natronomonas pharaonis DSM 2160... 77 2e-12
CT978957_3(CT978957|pid:none) Zebrafish DNA sequence from clone ... 76 4e-12
FP312982_45(FP312982|pid:none) uncultured bacterial clone mtbs45... 75 6e-12
CR954205_430(CR954205|pid:none) Ostreococcus tauri strain OTTH05... 75 1e-11
CR380957_39(CR380957|pid:none) Candida glabrata strain CBS138 ch... 74 1e-11
(Q67MP0) RecName: Full=Methylthioribose-1-phosphate isomerase; ... 74 2e-11
CP000227_360(CP000227|pid:none) Bacillus cereus Q1, complete gen... 74 2e-11
CP001177_346(CP001177|pid:none) Bacillus cereus AH187, complete ... 74 2e-11
AE016877_309(AE016877|pid:none) Bacillus cereus ATCC 14579, comp... 73 3e-11
BC071346_1(BC071346|pid:none) Danio rerio eukaryotic translation... 73 3e-11
CP000686_2948(CP000686|pid:none) Roseiflexus sp. RS-1, complete ... 73 3e-11
AE017343_171(AE017343|pid:none) Cryptococcus neoformans var. neo... 73 3e-11
(Q63GN3) RecName: Full=Methylthioribose-1-phosphate isomerase 1;... 73 3e-11
(Q3ABU6) RecName: Full=Methylthioribose-1-phosphate isomerase; ... 73 4e-11
AE017225_321(AE017225|pid:none) Bacillus anthracis str. Sterne, ... 73 4e-11
FN392320_1038(FN392320|pid:none) Pichia pastoris GS115 chromosom... 73 4e-11
CP000903_324(CP000903|pid:none) Bacillus weihenstephanensis KBAB... 72 5e-11
CP001634_1417(CP001634|pid:none) Kosmotoga olearia TBF 19.5.1, c... 72 5e-11
(A9VRK3) RecName: Full=Methylthioribose-1-phosphate isomerase 1;... 72 5e-11
(Q57896) RecName: Full=Putative translation initiation factor eI... 72 5e-11
(Q2RKL8) RecName: Full=Methylthioribose-1-phosphate isomerase; ... 72 5e-11
(B0TH58) RecName: Full=Methylthioribose-1-phosphate isomerase; ... 72 5e-11
(A9WGQ8) RecName: Full=Methylthioribose-1-phosphate isomerase; ... 72 7e-11
EF086198_1(EF086198|pid:none) Picea sitchensis clone WS0287_E06 ... 72 9e-11
CP000804_2093(CP000804|pid:none) Roseiflexus castenholzii DSM 13... 71 1e-10
(O58185) RecName: Full=Putative translation initiation factor eI... 71 1e-10
CP001185_479(CP001185|pid:none) Thermosipho africanus TCF52B, co... 70 2e-10
CP000855_641(CP000855|pid:none) Thermococcus onnurineus NA1, com... 70 2e-10
AM181176_1603(AM181176|pid:none) Pseudomonas fluorescens SBW25 c... 70 3e-10
CT009753_144(CT009753|pid:none) Trypanosoma brucei chromosome 11... 70 3e-10
AY596297_259(AY596297|pid:none) Haloarcula marismortui ATCC 4304... 70 3e-10
(Q3A2J8) RecName: Full=Methylthioribose-1-phosphate isomerase; ... 69 4e-10
(Q7UF90) RecName: Full=Methylthioribose-1-phosphate isomerase; ... 69 4e-10
AE017261_527(AE017261|pid:none) Picrophilus torridus DSM 9790, c... 69 4e-10
FN357653_7(FN357653|pid:none) Schistosoma mansoni genome sequenc... 69 6e-10
(B2SIW1) RecName: Full=Methylthioribose-1-phosphate isomerase; ... 69 6e-10
(Q3BV11) RecName: Full=Methylthioribose-1-phosphate isomerase; ... 69 6e-10
CP001337_3445(CP001337|pid:none) Chloroflexus aggregans DSM 9485... 69 6e-10
(Q8PM04) RecName: Full=Methylthioribose-1-phosphate isomerase; ... 69 7e-10
CP001337_1947(CP001337|pid:none) Chloroflexus aggregans DSM 9485... 68 1e-09
AP010904_3141(AP010904|pid:none) Desulfovibrio magneticus RS-1 D... 68 1e-09
(A8YD90) RecName: Full=Methylthioribose-1-phosphate isomerase; ... 68 1e-09
(A9AYL1) RecName: Full=Methylthioribose-1-phosphate isomerase; ... 68 1e-09
CP000875_2337(CP000875|pid:none) Herpetosiphon aurantiacus ATCC ... 68 1e-09
(A9BJF6) RecName: Full=Methylthioribose-1-phosphate isomerase 1;... 68 1e-09
CP000879_621(CP000879|pid:none) Petrotoga mobilis SJ95, complete... 68 1e-09
(Q317L9) RecName: Full=Methylthioribose-1-phosphate isomerase; ... 67 2e-09
(Q2LXN1) RecName: Full=Methylthioribose-1-phosphate isomerase; ... 67 2e-09
(A1JP09) RecName: Full=Methylthioribose-1-phosphate isomerase; ... 67 2e-09
EU016599_15(EU016599|pid:none) Uncultured Group I marine crenarc... 67 2e-09
CP001365_2249(CP001365|pid:none) Halorubrum lacusprofundi ATCC 4... 67 2e-09
(A4ILL1) RecName: Full=Methylthioribose-1-phosphate isomerase; ... 67 2e-09
(Q21S04) RecName: Full=Methylthioribose-1-phosphate isomerase; ... 67 2e-09
CP001147_1444(CP001147|pid:none) Thermodesulfovibrio yellowstoni... 67 2e-09
CP000909_1354(CP000909|pid:none) Chloroflexus aurantiacus J-10-f... 67 3e-09
(Q9UYB6) RecName: Full=Putative translation initiation factor eI... 67 3e-09
AM502245_80(AM502245|pid:none) Leishmania infantum chromosome 27. 67 3e-09
FN357611_11(FN357611|pid:none) Schistosoma mansoni genome sequen... 66 4e-09
AM494964_131(AM494964|pid:none) Leishmania braziliensis chromoso... 66 4e-09
CP000922_1976(CP000922|pid:none) Anoxybacillus flavithermus WK1,... 66 5e-09
(Q72JR1) RecName: Full=Methylthioribose-1-phosphate isomerase; ... 66 5e-09
CP001357_2443(CP001357|pid:none) Brachyspira hyodysenteriae WA1,... 65 6e-09
CU638743_169(CU638743|pid:none) Podospora anserina genomic DNA c... 65 6e-09
(A8F3A3) RecName: Full=Methylthioribose-1-phosphate isomerase 1;... 65 6e-09
(A9KIE9) RecName: Full=Methylthioribose-1-phosphate isomerase; ... 65 8e-09
CP001348_1257(CP001348|pid:none) Clostridium cellulolyticum H10,... 65 1e-08
AY738148_1(AY738148|pid:none) Zea mays isopentenyl-diphosphate d... 65 1e-08
EU965753_1(EU965753|pid:none) Zea mays clone 288697 methylthiori... 65 1e-08
CP001146_759(CP001146|pid:none) Dictyoglomus thermophilum H-6-12... 65 1e-08
BX950851_3452(BX950851|pid:none) Erwinia carotovora subsp. atros... 64 1e-08
CP001638_784(CP001638|pid:none) Geobacillus sp. WCH70, complete ... 64 1e-08
(Q5SJE2) RecName: Full=Methylthioribose-1-phosphate isomerase; ... 64 1e-08
CP001140_1210(CP001140|pid:none) Desulfurococcus kamchatkensis 1... 64 1e-08
(A4W7Z1) RecName: Full=Methylthioribose-1-phosphate isomerase; ... 64 2e-08
AP006878_1048(AP006878|pid:none) Thermococcus kodakarensis KOD1 ... 64 2e-08
(B2FKI7) RecName: Full=Methylthioribose-1-phosphate isomerase; ... 64 2e-08
AP009153_817(AP009153|pid:none) Gemmatimonas aurantiaca T-27 DNA... 64 2e-08
(Q0VPK6) RecName: Full=Methylthioribose-1-phosphate isomerase; ... 64 2e-08
(B1KZY3) RecName: Full=Methylthioribose-1-phosphate isomerase; ... 64 2e-08
CP000140_2211(CP000140|pid:none) Parabacteroides distasonis ATCC... 64 2e-08
AL445066_279(AL445066|pid:none) Thermoplasma acidophilum complet... 64 2e-08
(P74497) RecName: Full=Methylthioribose-1-phosphate isomerase; ... 64 2e-08
AM920436_616(AM920436|pid:none) Penicillium chrysogenum Wisconsi... 64 2e-08
(A6LE92) RecName: Full=Methylthioribose-1-phosphate isomerase; ... 64 2e-08
AY223354_1(AY223354|pid:none) Schistosoma japonicum clone ZZD935... 63 3e-08
AE006641_2733(AE006641|pid:none) Sulfolobus solfataricus P2, com... 63 3e-08
(A7GCV8) RecName: Full=Methylthioribose-1-phosphate isomerase; ... 63 4e-08
(Q88M09) RecName: Full=Methylthioribose-1-phosphate isomerase; ... 63 4e-08
BX950229_1618(BX950229|pid:none) Methanococcus maripaludis strai... 63 4e-08
CP001251_869(CP001251|pid:none) Dictyoglomus turgidum DSM 6724, ... 63 4e-08
AY087601_1(AY087601|pid:none) Arabidopsis thaliana clone 36965 m... 63 4e-08
CP001083_1234(CP001083|pid:none) Clostridium botulinum Ba4 str. ... 63 4e-08
CP000505_246(CP000505|pid:none) Thermofilum pendens Hrk 5, compl... 63 4e-08
(Q819F2) RecName: Full=Methylthioribose-1-phosphate isomerase 2;... 62 5e-08
(B1IJF0) RecName: Full=Methylthioribose-1-phosphate isomerase; ... 62 5e-08
CP001176_3981(CP001176|pid:none) Bacillus cereus B4264, complete... 62 5e-08
AE017261_261(AE017261|pid:none) Picrophilus torridus DSM 9790, c... 62 5e-08
(Q731R7) RecName: Full=Methylthioribose-1-phosphate isomerase; ... 62 5e-08
BA000011_1275(BA000011|pid:none) Thermoplasma volcanium GSS1 DNA... 62 5e-08
(O29877) RecName: Full=Putative translation initiation factor eI... 62 5e-08
(A5D1G8) RecName: Full=Methylthioribose-1-phosphate isomerase; ... 62 7e-08
(A7Z3X0) RecName: Full=Methylthioribose-1-phosphate isomerase; ... 62 7e-08
(A5I1A6) RecName: Full=Methylthioribose-1-phosphate isomerase; ... 62 7e-08
CU468135_2606(CU468135|pid:none) Erwinia tasmaniensis strain ET1... 62 7e-08
CP001229_593(CP001229|pid:none) Sulfurihydrogenibium azorense Az... 62 9e-08
CP000227_3721(CP000227|pid:none) Bacillus cereus Q1, complete ge... 62 9e-08
BA000030_5069(BA000030|pid:none) Streptomyces avermitilis MA-468... 62 9e-08
AL939114_233(AL939114|pid:none) Streptomyces coelicolor A3(2) co... 62 9e-08
AL445065_254(AL445065|pid:none) Thermoplasma acidophilum complet... 62 9e-08
(A8ANI3) RecName: Full=Methylthioribose-1-phosphate isomerase; ... 62 9e-08
AJ439060_9(AJ439060|pid:none) Anopheles gambiae DNA from 2R chro... 62 9e-08
(A7GS56) RecName: Full=Methylthioribose-1-phosphate isomerase; ... 61 1e-07
(Q8F2A8) RecName: Full=Methylthioribose-1-phosphate isomerase; ... 61 1e-07
(Q72T46) RecName: Full=Methylthioribose-1-phosphate isomerase; ... 61 1e-07
(B0U5G3) RecName: Full=Methylthioribose-1-phosphate isomerase; ... 61 1e-07
AP008217_520(AP008217|pid:none) Oryza sativa (japonica cultivar-... 61 1e-07
(A4J678) RecName: Full=Methylthioribose-1-phosphate isomerase; ... 61 2e-07
FP236842_2728(FP236842|pid:none) Erwinia pyrifoliae strain Ep1/9... 61 2e-07
H84471(H84471)hypothetical protein At2g05830 [imported] - Arabid... 61 2e-07
AL834276_1(AL834276|pid:none) Homo sapiens mRNA; cDNA DKFZp547E2... 61 2e-07
(O31662) RecName: Full=Methylthioribose-1-phosphate isomerase; ... 60 2e-07
CP000254_598(CP000254|pid:none) Methanospirillum hungatei JF-1, ... 60 2e-07
(A7MKX3) RecName: Full=Methylthioribose-1-phosphate isomerase; ... 60 2e-07
(Q2SE63) RecName: Full=Methylthioribose-1-phosphate isomerase; ... 60 2e-07
CP000587_231(CP000587|pid:none) Ostreococcus lucimarinus CCE9901... 60 2e-07
(Q1IDA4) RecName: Full=Methylthioribose-1-phosphate isomerase; ... 60 3e-07
AP009493_4522(AP009493|pid:none) Streptomyces griseus subsp. gri... 60 3e-07
CP000867_1041(CP000867|pid:none) Methanococcus maripaludis C6, c... 60 3e-07
AE015927_822(AE015927|pid:none) Clostridium tetani E88, complete... 60 3e-07
(Q7U4V1) RecName: Full=Methylthioribose-1-phosphate isomerase; ... 60 3e-07
(Q113K5) RecName: Full=Methylthioribose-1-phosphate isomerase; ... 60 3e-07
CP001283_3963(CP001283|pid:none) Bacillus cereus AH820, complete... 60 3e-07
(Q6HED3) RecName: Full=Methylthioribose-1-phosphate isomerase 2;... 60 3e-07
CP000682_2230(CP000682|pid:none) Metallosphaera sedula DSM 5348,... 60 3e-07
(A8F7V1) RecName: Full=Methylthioribose-1-phosphate isomerase 2;... 60 3e-07
AM180088_1777(AM180088|pid:none) Haloquadratum walsbyi DSM 16790... 59 4e-07
(B1YIY4) RecName: Full=Methylthioribose-1-phosphate isomerase; ... 59 4e-07
(A4TPM9) RecName: Full=Methylthioribose-1-phosphate isomerase; ... 59 4e-07
(B0C8J2) RecName: Full=Methylthioribose-1-phosphate isomerase; ... 59 4e-07
CP000964_3868(CP000964|pid:none) Klebsiella pneumoniae 342, comp... 59 4e-07
CP000806_2331(CP000806|pid:none) Cyanothece sp. ATCC 51142 circu... 59 4e-07
CP001358_2287(CP001358|pid:none) Desulfovibrio desulfuricans sub... 59 6e-07
CP001186_4052(CP001186|pid:none) Bacillus cereus G9842, complete... 59 6e-07
(Q9BV20) RecName: Full=Methylthioribose-1-phosphate isomerase; ... 59 6e-07
CP000075_3647(CP000075|pid:none) Pseudomonas syringae pv. syring... 59 6e-07
(Q3M785) RecName: Full=Methylthioribose-1-phosphate isomerase; ... 59 6e-07
(Q81MJ6) RecName: Full=Methylthioribose-1-phosphate isomerase 2;... 59 6e-07
CP001403_2460(CP001403|pid:none) Sulfolobus islandicus Y.G.57.14... 59 6e-07
(A4VLZ8) RecName: Full=Methylthioribose-1-phosphate isomerase; ... 59 8e-07
CP001400_2210(CP001400|pid:none) Sulfolobus islandicus M.14.25, ... 59 8e-07
(Q3AWF5) RecName: Full=Methylthioribose-1-phosphate isomerase; ... 59 8e-07
CP000968_1533(CP000968|pid:none) Candidatus Korarchaeum cryptofi... 58 1e-06
CP001399_2346(CP001399|pid:none) Sulfolobus islandicus L.S.2.15,... 58 1e-06
CP000951_2267(CP000951|pid:none) Synechococcus sp. PCC 7002, com... 58 1e-06
BX842620_4(BX842620|pid:none) Neurospora crassa DNA linkage grou... 58 1e-06
(B1XJK0) RecName: Full=Methylthioribose-1-phosphate isomerase; ... 58 1e-06
CP000742_916(CP000742|pid:none) Methanococcus vannielii SB, comp... 58 1e-06
CP001287_3257(CP001287|pid:none) Cyanothece sp. PCC 8801, comple... 58 1e-06
(Q3K8T8) RecName: Full=Methylthioribose-1-phosphate isomerase; ... 58 1e-06
CP000780_1831(CP000780|pid:none) Candidatus Methanoregula boonei... 58 1e-06
(A1VHH2) RecName: Full=Methylthioribose-1-phosphate isomerase; ... 58 1e-06
(B2K633) RecName: Full=Methylthioribose-1-phosphate isomerase; ... 58 1e-06
(A9VFD5) RecName: Full=Methylthioribose-1-phosphate isomerase 2;... 58 1e-06
(A7NFR2) RecName: Full=Methylthioribose-1-phosphate isomerase; ... 58 1e-06
(Q606P2) RecName: Full=Methylthioribose-1-phosphate isomerase; ... 58 1e-06
(B0SFD6) RecName: Full=Methylthioribose-1-phosphate isomerase; ... 57 2e-06
CP001472_301(CP001472|pid:none) Acidobacterium capsulatum ATCC 5... 57 2e-06
CP000609_1771(CP000609|pid:none) Methanococcus maripaludis C5, c... 57 2e-06
CP000852_388(CP000852|pid:none) Caldivirga maquilingensis IC-167... 57 2e-06
CP001336_3711(CP001336|pid:none) Desulfitobacterium hafniense DC... 57 2e-06
(Q24UA0) RecName: Full=Methylthioribose-1-phosphate isomerase; ... 57 2e-06
CP001398_1557(CP001398|pid:none) Thermococcus gammatolerans EJ3,... 57 2e-06
CU466930_1692(CU466930|pid:none) Candidatus Cloacamonas acidamin... 57 2e-06
GM017008_244(GM017008|pid:none) Sequence 1838 from Patent EP1923... 57 3e-06
CP001132_995(CP001132|pid:none) Acidithiobacillus ferrooxidans A... 57 3e-06
(A0LIZ1) RecName: Full=Methylthioribose-1-phosphate isomerase; ... 56 4e-06
BA000023_993(BA000023|pid:none) Sulfolobus tokodaii str. 7 DNA, ... 56 4e-06
(Q4K8M6) RecName: Full=Methylthioribose-1-phosphate isomerase; ... 56 4e-06
(Q9X013) RecName: Full=Methylthioribose-1-phosphate isomerase; ... 56 4e-06
AY659090_1(AY659090|pid:none) Synthetic construct Peudomonas aer... 56 4e-06
(A1U3J9) RecName: Full=Methylthioribose-1-phosphate isomerase; ... 56 4e-06
CP000743_27(CP000743|pid:none) Methanococcus aeolicus Nankai-3, ... 56 5e-06
(A6V2Q6) RecName: Full=Methylthioribose-1-phosphate isomerase; ... 56 5e-06
CP000493_923(CP000493|pid:none) Hyperthermus butylicus DSM 5456,... 55 6e-06
CP001275_881(CP001275|pid:none) Thermomicrobium roseum DSM 5159,... 55 6e-06
(Q9UZ16) RecName: Full=Putative translation initiation factor eI... 55 6e-06
(A5IIM2) RecName: Full=Methylthioribose-1-phosphate isomerase; ... 55 8e-06
(Q5YQZ6) RecName: Full=Methylthioribose-1-phosphate isomerase; ... 55 8e-06
(A8GAB1) RecName: Full=Methylthioribose-1-phosphate isomerase; ... 55 8e-06
CP000561_2148(CP000561|pid:none) Pyrobaculum calidifontis JCM 11... 55 8e-06
AE014297_4940(AE014297|pid:none) Drosophila melanogaster chromos... 55 1e-05
AP009178_570(AP009178|pid:none) Nitratiruptor sp. SB155-2 genomi... 55 1e-05
CP000559_970(CP000559|pid:none) Methanocorpusculum labreanum Z, ... 54 1e-05
CP000102_987(CP000102|pid:none) Methanosphaera stadtmanae DSM 30... 54 1e-05
CP000477_355(CP000477|pid:none) Methanosaeta thermophila PT, com... 54 1e-05
CP000099_1015(CP000099|pid:none) Methanosarcina barkeri str. Fus... 54 2e-05
CR848601_1(CR848601|pid:none) Xenopus tropicalis finished cDNA, ... 54 2e-05
CP000678_804(CP000678|pid:none) Methanobrevibacter smithii ATCC ... 54 2e-05
(Q0VFN1) RecName: Full=Methylthioribose-1-phosphate isomerase; ... 54 2e-05
CP001344_3541(CP001344|pid:none) Cyanothece sp. PCC 7425, comple... 54 2e-05
(A1ALC1) RecName: Full=Methylthioribose-1-phosphate isomerase; ... 54 2e-05
(B0K2V6) RecName: Full=Methylthioribose-1-phosphate isomerase; ... 54 2e-05
(A4XTE5) RecName: Full=Methylthioribose-1-phosphate isomerase; ... 53 4e-05
(Q2NL31) RecName: Full=Methylthioribose-1-phosphate isomerase; ... 53 4e-05
(B2V8N9) RecName: Full=Methylthioribose-1-phosphate isomerase; ... 53 4e-05
CR382138_117(CR382138|pid:none) Debaryomyces hansenii strain CBS... 53 4e-05
AL844507_275(AL844507|pid:none) Plasmodium falciparum 3D7 chromo... 52 7e-05
CP001359_4295(CP001359|pid:none) Anaeromyxobacter dehalogenans 2... 52 7e-05
(Q7NP62) RecName: Full=Methylthioribose-1-phosphate isomerase; ... 52 9e-05
CP000716_1150(CP000716|pid:none) Thermosipho melanesiensis BI429... 52 9e-05
CT005251_1(CT005251|pid:none) Leishmania major strain Friedlin, ... 52 9e-05
(A9FD66) RecName: Full=Methylthioribose-1-phosphate isomerase; ... 51 1e-04
CU640366_532(CU640366|pid:none) Podospora anserina genomic DNA c... 51 1e-04
AM746676_1576(AM746676|pid:none) Sorangium cellulosum 'So ce 56'... 51 1e-04
CP001145_1046(CP001145|pid:none) Coprothermobacter proteolyticus... 51 2e-04
CT005272_510(CT005272|pid:none) Leishmania major strain Friedlin... 51 2e-04
(Q2IH96) RecName: Full=Methylthioribose-1-phosphate isomerase; ... 51 2e-04
CP001157_1527(CP001157|pid:none) Azotobacter vinelandii DJ, comp... 51 2e-04
(Q39ZK3) RecName: Full=Methylthioribose-1-phosphate isomerase; ... 51 2e-04
BC155626_1(BC155626|pid:none) Danio rerio zgc:172216, mRNA (cDNA... 50 2e-04
CU633871_13(CU633871|pid:none) Podospora anserina genomic DNA ch... 50 4e-04
CP000504_657(CP000504|pid:none) Pyrobaculum islandicum DSM 4184,... 50 4e-04
AM420293_3527(AM420293|pid:none) Saccharopolyspora erythraea NRR... 50 4e-04
AM494972_518(AM494972|pid:none) Leishmania braziliensis chromoso... 49 5e-04
AM494949_2(AM494949|pid:none) Leishmania braziliensis chromosome... 49 5e-04
(Q8R9L7) RecName: Full=Methylthioribose-1-phosphate isomerase; ... 49 6e-04
AM502254_74(AM502254|pid:none) Leishmania infantum chromosome 36. 49 6e-04
AM114193_875(AM114193|pid:none) Uncultured methanogenic archaeon... 49 6e-04
AE009951_1986(AE009951|pid:none) Fusobacterium nucleatum subsp. ... 49 8e-04
AE010299_76(AE010299|pid:none) Methanosarcina acetivorans str. C... 48 0.001
(B2A5S2) RecName: Full=Methylthioribose-1-phosphate isomerase; ... 48 0.001
AM502228_173(AM502228|pid:none) Leishmania infantum chromosome 10. 48 0.001
BT081094_1(BT081094|pid:none) Caligus clemensi clone ccle-evs-50... 48 0.001
(A5G9J7) RecName: Full=Methylthioribose-1-phosphate isomerase; ... 48 0.001
AE008384_1371(AE008384|pid:none) Methanosarcina mazei strain Goe... 48 0.001
(Q47AR7) RecName: Full=Methylthioribose-1-phosphate isomerase; ... 47 0.002
CP001338_2418(CP001338|pid:none) Candidatus Methanosphaerula pal... 46 0.004
CT978603_2012(CT978603|pid:none) Synechococcus sp. RCC307 genomi... 45 0.011
EU974711_1(EU974711|pid:none) Zea mays clone 456598 unknown mRNA. 44 0.015
CR954213_99(CR954213|pid:none) Ostreococcus tauri strain OTTH059... 44 0.015
CP001087_509(CP001087|pid:none) Desulfobacterium autotrophicum H... 44 0.019
(Q8KBH1) RecName: Full=Methylthioribose-1-phosphate isomerase; ... 44 0.025
(Q92TI2) RecName: Full=Methylthioribose-1-phosphate isomerase; ... 43 0.033
AP006840_816(AP006840|pid:none) Symbiobacterium thermophilum IAM... 43 0.043
CP000492_679(CP000492|pid:none) Chlorobium phaeobacteroides DSM ... 42 0.056
AX118853_1(AX118853|pid:none) Sequence 17 from Patent WO0129221. 42 0.073
(A5FUV7) RecName: Full=Methylthioribose-1-phosphate isomerase; ... 42 0.073
CP001322_3734(CP001322|pid:none) Desulfatibacillum alkenivorans ... 42 0.073
CP000096_472(CP000096|pid:none) Pelodictyon luteolum DSM 273, co... 42 0.073
F72745(F72745)hypothetical protein APE0493 - Aeropyrum pernix (s... 42 0.096
CP001097_1736(CP001097|pid:none) Chlorobium limicola DSM 245, co... 42 0.096
BT066464_1(BT066464|pid:none) Zea mays full-length cDNA clone ZM... 41 0.13
CP000607_525(CP000607|pid:none) Chlorobium phaeovibrioides DSM 2... 41 0.13
CR382124_643(CR382124|pid:none) Kluyveromyces lactis strain NRRL... 41 0.16
CU928161_4672(CU928161|pid:none) Escherichia coli S88 chromosome... 41 0.16
(A6X8E9) RecName: Full=Methylthioribose-1-phosphate isomerase; ... 40 0.21
CP001280_3274(CP001280|pid:none) Methylocella silvestris BL2, co... 40 0.21
BA000030_6665(BA000030|pid:none) Streptomyces avermitilis MA-468... 40 0.21
(A6ULQ4) RecName: Full=Methylthioribose-1-phosphate isomerase; ... 40 0.28
CP000435_2431(CP000435|pid:none) Synechococcus sp. CC9311, compl... 40 0.36
(Q5FQK0) RecName: Full=Methylthioribose-1-phosphate isomerase; ... 40 0.36
AE017349_276(AE017349|pid:none) Cryptococcus neoformans var. neo... 39 0.48
CP001150_702(CP001150|pid:none) Rhodobacter sphaeroides KD131 ch... 39 0.62
(A8ZYA5) RecName: Full=Methylthioribose-1-phosphate isomerase; ... 39 0.62
CP001581_317(CP001581|pid:none) Clostridium botulinum A2 str. Ky... 39 0.62
CP001110_1921(CP001110|pid:none) Pelodictyon phaeoclathratiforme... 39 0.81
CP000250_4668(CP000250|pid:none) Rhodopseudomonas palustris HaA2... 38 1.1
BX572608_174(BX572608|pid:none) Rhodopseudomonas palustris CGA00... 38 1.1
CP001096_5230(CP001096|pid:none) Rhodopseudomonas palustris TIE-... 38 1.1
CP000394_1394(CP000394|pid:none) Granulibacter bethesdensis CGDN... 38 1.4
BA000040_961(BA000040|pid:none) Bradyrhizobium japonicum USDA 11... 38 1.4
CP000774_2238(CP000774|pid:none) Parvibaculum lavamentivorans DS... 37 2.4
CT971583_2144(CT971583|pid:none) Synechococcus WH7803 complete g... 37 2.4
CP000283_4383(CP000283|pid:none) Rhodopseudomonas palustris BisB... 37 2.4
CU234118_6521(CU234118|pid:none) Bradyrhizobium sp. ORS278,compl... 37 3.1
CP001032_4095(CP001032|pid:none) Opitutus terrae PB90-1, complet... 36 4.0
CP000301_4879(CP000301|pid:none) Rhodopseudomonas palustris BisB... 36 4.0
CP000494_611(CP000494|pid:none) Bradyrhizobium sp. BTAi1, comple... 36 4.0
AJ310105_1(AJ310105|pid:none) Sugarcane mosaic virus genomic RNA... 36 5.2
AM889285_2233(AM889285|pid:none) Gluconacetobacter diazotrophicu... 36 5.3
BX548175_2453(BX548175|pid:none) Prochlorococcus marinus MIT9313... 36 5.3
AP007255_4123(AP007255|pid:none) Magnetospirillum magneticum AMB... 36 5.3
CP000230_360(CP000230|pid:none) Rhodospirillum rubrum ATCC 11170... 36 5.3
CP001133_361(CP001133|pid:none) Vibrio fischeri MJ11 chromosome ... 35 9.0

>(Q54EY2) RecName: Full=Translation initiation factor eIF-2B subunit
beta; AltName: Full=eIF-2B GDP-GTP exchange factor
subunit beta;
Length = 388

Score = 563 bits (1451), Expect = e-159
Identities = 294/342 (85%), Positives = 294/342 (85%)
Frame = +1

Query: 706 KRSNAKSLIDQIKIIGKKLMNAXPLEFCIGNIVRRVLFIIREEYLTFFRNKKNGLNNXXX 885
K NAKSLIDQIKIIGKKLMNA PLEFCIGNIVRRVLFIIREEYLTFFRNKKNGLNN
Sbjct: 47 KWGNAKSLIDQIKIIGKKLMNAQPLEFCIGNIVRRVLFIIREEYLTFFRNKKNGLNNDDY 106

Query: 886 XXXXFETTTXXXXXXXXXXXXXXXXXXXXXXXXXXVMLXXXXXXXXXXXXFTETFPRLKA 1065
FETTT VML FTETFPRLKA
Sbjct: 107 DDDDFETTTSNNNNNNNNNNINSSSNINKNNKYSNVMLQDDPIDDQEDIDFTETFPRLKA 166

Query: 1066 AIMDSINELIDELEGLHRNVAEQAIEHIHSNETIMTLGCSRTVEEFLKEAARKRSFKVIV 1245
AIMDSINELIDELEGLHRNVAEQAIEHIHSNETIMTLGCSRTVEEFLKEAARKRSFKVIV
Sbjct: 167 AIMDSINELIDELEGLHRNVAEQAIEHIHSNETIMTLGCSRTVEEFLKEAARKRSFKVIV 226

Query: 1246 VETAPSLEGQKTAISLSKASIDTTLITDSAVFAMMSRVNKVIIGTHAVMANGGLIATSGT 1425
VETAPSLEGQKTAISLSKASIDTTLITDSAVFAMMSRVNKVIIGTHAVMANGGLIATSGT
Sbjct: 227 VETAPSLEGQKTAISLSKASIDTTLITDSAVFAMMSRVNKVIIGTHAVMANGGLIATSGT 286

Query: 1426 HTLAVAAKYHSVPIVVCTGLYKLCPLYAYDQDTFNNFGSPGEYLKFEEAEFLENVHSYNP 1605
HTLAVAAKYHSVPIVVCTGLYKLCPLYAYDQDTFNNFGSPGEYLKFEEAEFLENVHSYNP
Sbjct: 287 HTLAVAAKYHSVPIVVCTGLYKLCPLYAYDQDTFNNFGSPGEYLKFEEAEFLENVHSYNP 346

Query: 1606 TFDYVAPDLVSLFITNIGGHNPSYIYRLLQEYYDARDILEDE 1731
TFDYVAPDLVSLFITNIGGHNPSYIYRLLQEYYDARDILEDE
Sbjct: 347 TFDYVAPDLVSLFITNIGGHNPSYIYRLLQEYYDARDILEDE 388

Score = 321 bits (822), Expect = 6e-86
Identities = 171/216 (79%), Positives = 171/216 (79%)
Frame = +2

Query: 68 MEKQAEKQLEKQLESFILHLKRKTVVGSYQVSRASAELLRQWVHKGKWGNAKSLIDQIKI 247
MEKQAEKQLEKQLESFILHLKRKTVVGSYQVSRASAELLRQWVHKGKWGNAKSLIDQIKI
Sbjct: 1 MEKQAEKQLEKQLESFILHLKRKTVVGSYQVSRASAELLRQWVHKGKWGNAKSLIDQIKI 60

Query: 248 IGKKLMNAQPLEFCIGNIVRRVLFIIREEYLTFFRNKKNGLNNXXXXXXXFETTTXXXXX 427
IGKKLMNAQPLEFCIGNIVRRVLFIIREEYLTFFRNKKNGLNN FETTT
Sbjct: 61 IGKKLMNAQPLEFCIGNIVRRVLFIIREEYLTFFRNKKNGLNNDDYDDDDFETTTSNNNN 120

Query: 428 XXXXXXXXXXXXXXXXXXXXXVMLXXXXXXXXXXXXFTETFPRLKAAIMDSINELIDELE 607
VML FTETFPRLKAAIMDSINELIDELE
Sbjct: 121 NNNNNNINSSSNINKNNKYSNVMLQDDPIDDQEDIDFTETFPRLKAAIMDSINELIDELE 180

Query: 608 GLHRNVAEQAIEHIHSNETIMTLGCSRTVEEFLKEA 715
GLHRNVAEQAIEHIHSNETIMTLGCSRTVEEFLKEA
Sbjct: 181 GLHRNVAEQAIEHIHSNETIMTLGCSRTVEEFLKEA 216

Lambda K H
0.318 0.134 0.401

Gapped
Lambda K H
0.267 0.0410 0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3236559
Number of Hits to DB: 1,957,861,965
Number of extensions: 33310867
Number of successful extensions: 90669
Number of sequences better than 10.0: 401
Number of HSP's gapped: 90244
Number of HSP's successfully gapped: 516
Length of query: 595
Length of database: 1,051,180,864
Length adjustment: 134
Effective length of query: 461
Effective length of database: 617,481,958
Effective search space: 284659182638
Effective search space used: 284659182638
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)

PSORT

psg: 0.66 gvh: 0.39 alm: 0.38 top: 0.53 tms: 0.00 mit: 0.35 mip: 0.07
nuc: 0.00 erl: 0.00 erm: 0.20 pox: 0.00 px2: 0.00 vac: 0.00 rnp: 0.00
act: 0.00 caa: 0.00 yqr: 0.00 tyr: 0.00 leu: 0.00 gpi: 0.00 myr: 0.00
dna: 0.00 rib: 0.00 bac: 0.00 m1a: 0.00 m1b: 0.00 m2 : 0.00 mNt: 0.00
m3a: 0.00 m3b: 0.00 m_ : 1.00

32.0 %: cytoplasmic
28.0 %: mitochondrial
20.0 %: nuclear
4.0 %: extracellular, including cell wall
4.0 %: cytoskeletal
4.0 %: peroxisomal
4.0 %: vacuolar
4.0 %: plasma membrane

>> prediction for Contig-U15074-1 is cyt

VS (DIR, S) 0
VH (FL, L) 0
VF (FL, S) 0
AH (FL, L) 0
AF (FL, S) 0
SL (DIR, L) 0
SS (DIR, S) 2
SH (FL, L) 0
SF (FL, S) 1
CH (FL, L) 1
CF (FL, S) 0
FCL (DIR, L) 0
FC (DIR, S) 0
FC-IC (SUB) 0