| Contig-U15071-1 |
| Contig ID |
Contig-U15071-1 |
| Contig update |
2004. 6.11 |
| Contig sequence |
 |
| Gap |
no gap |
| Contig length |
1831 |
| Chromosome number (1..6, M) |
2 |
| Chromosome length |
8467578 |
| Start point |
5758673 |
| End point |
5756843 |
| Strand (PLUS/MINUS) |
MINUS |
| Number of clones |
7 |
| Number of EST |
11 |
| Link to clone list |
U15071 |
| List of clone(s) |
|
| Translated Amino Acid sequence |
|
| Translated Amino Acid sequence (All Frames) |
|
| own update |
2004. 6.23 |
| Homology vs CSM-cDNA |
|
| dna update |
2009. 1.11 |
| Homology vs DNA |
Query= Contig-U15071-1 (Contig-U15071-1Q) /CSM_Contig/Contig-U15071-1Q.Seq.d
(1831 letters)
Database: ddbj_A
92,845,959 sequences; 95,242,211,685 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value N
(AC115598) Dictyostelium discoideum chromosome 2 map 581427-... 2123 0.0 1
(BJ376265) Dictyostelium discoideum cDNA clone:ddc21f23, 3' ... 1269 0.0 1
(AU061562) Dictyostelium discoideum slug cDNA, clone SLE638. 1203 0.0 1
(AU265797) Dictyostelium discoideum vegetative cDNA clone:VS... 1164 0.0 1
(BJ392499) Dictyostelium discoideum cDNA clone:dds27j22, 5' ... 708 0.0 3
(AU034883) Dictyostelium discoideum slug cDNA, clone SLE638. 999 0.0 1
(AU265798) Dictyostelium discoideum vegetative cDNA clone:VS... 912 0.0 2
(C24366) Dictyostelium discoideum gamete cDNA, clone FC-AQ16. 872 0.0 1
(C91052) Dictyostelium discoideum slug cDNA, clone SSJ424. 652 0.0 1
(C24365) Dictyostelium discoideum gamete cDNA, clone FC-AQ16. 599 e-180 2
(BJ362450) Dictyostelium discoideum cDNA clone:ddc21f23, 5' ... 581 e-180 2
(BJ404241) Dictyostelium discoideum cDNA clone:dds27j22, 3' ... 317 8e-82 1
(AU074061) Dictyostelium discoideum slug cDNA, clone SSJ424. 127 2e-24 1
(AU073574) Dictyostelium discoideum slug cDNA, clone SSH576. 127 2e-24 1
(BS000574) Pan troglodytes chromosome Y clone:PTB-031D23, co... 54 0.019 1
(AC147147) Pan troglodytes BAC clone CH251-230I19 from Y, co... 54 0.019 1
(AC146452) Pan troglodytes BAC clone CH251-483N3 from Y, com... 54 0.019 1
(EJ076903) 1095458129953 Global-Ocean-Sampling_GS-26-01-01-1... 54 0.019 1
(BX664628) Zebrafish DNA sequence from clone CH211-147D7 in ... 46 0.073 6
(AC156964) Bos taurus clone CH240-64A18, WORKING DRAFT SEQUE... 50 0.30 1
(EJ063605) 1095458016122 Global-Ocean-Sampling_GS-26-01-01-1... 50 0.30 1
(CP000825) Prochlorococcus marinus str. MIT 9215, complete g... 50 0.30 1
(AM462241) Vitis vinifera contig VV78X144047.8, whole genome... 42 0.70 3
(AC148486) Medicago truncatula clone mth2-56d23, complete se... 48 1.2 1
(CV256781) WS0244.B21_M14 PTxD-ICC-N-A-14 Populus trichocarp... 48 1.2 1
(CU368751) Mouse DNA sequence from clone DN-239K2 on chromos... 46 4.7 1
(AL645668) Mouse DNA sequence from clone RP23-32L21 on chrom... 46 4.7 1
(AC101299) Mus musculus chromosome 1, clone RP23-103M17, com... 46 4.7 1
(AC152593) Bos taurus clone CH240-5M1, WORKING DRAFT SEQUENC... 46 4.7 1
(AC100051) Mus musculus clone RP23-32L21, LOW-PASS SEQUENCE ... 46 4.7 1
(AC172333) Bos taurus clone CH240-269B11, WORKING DRAFT SEQU... 46 4.7 1
(AY812072) Schistosoma japonicum SJCHGC04540 protein mRNA, p... 46 4.7 1
(BH084283) RPCI-24-309M12.TJ RPCI-24 Mus musculus genomic cl... 46 4.7 1
(EJ510859) 1095407083298 Global-Ocean-Sampling_GS-28-01-01-1... 46 4.7 1
(EI943740) akm3ah44r Km3-3010m-Ionian Sea marine metagenome ... 46 4.7 1
(DE937972) Macropus eugenii DNA, BAC clone: MEB1-131F05_F, 5... 46 4.7 1
(DE149572) Bombyx mori genomic DNA, Fosmid clone:RO0289-O13_F. 46 4.7 1
(BH957767) odf78g02.g1 B.oleracea002 Brassica oleracea genom... 46 4.7 1
(AM880469) Mytilus edulis EST, 5' end sequence, clone mytilu... 46 4.7 1
(CX862919) SJE_FL_D01.T3###seg1 SJE Schistosoma japonicum cD... 46 4.7 1
(CV741919) SJAL_036_04.T3 SJL Schistosoma japonicum cDNA, mR... 46 4.7 1
(BU776132) SJEBUD04 SJE Schistosoma japonicum cDNA similar t... 46 4.7 1
(BU773479) SJEFLD01 SJE Schistosoma japonicum cDNA similar t... 46 4.7 1
(CP000112) Desulfovibrio desulfuricans G20, complete genome. 46 4.7 1
(AC116305) Dictyostelium discoideum chromosome 2 map 1005175... 34 5.8 12
(AC123133) Rattus norvegicus clone CH230-141K15, *** SEQUENC... 38 7.4 5
(AC193062) Echinops telfairi clone CH238-408B21, WORKING DRA... 32 8.4 2
(AC195449) Glycine tomentella clone gtt1-298n2, complete seq... 38 9.1 7
(AC176425) Strongylocentrotus purpuratus clone R3-12D8, WORK... 42 9.1 6
(BX072570) Zebrafish DNA sequence from clone DKEY-17E6 in li... 34 9.3 8
>(AC115598) Dictyostelium discoideum chromosome 2 map 581427-735498 strain
AX4, complete sequence.
Length = 154071
Score = 2123 bits (1071), Expect = 0.0
Identities = 1074/1075 (99%)
Strand = Plus / Plus
Query: 631 attcattttttaaacaattttgcgcaggagagacaattagagaaactgaaatatttacag 690
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 143641 attcattttttaaacaattttgcgcaggagagacaattagagaaactgaaatatttacag 143700
Query: 691 agaaattaaataaattaggtattggtacaattttagattatgcaattgaagagttggcag 750
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 143701 agaaattaaataaattaggtattggtacaattttagattatgcaattgaagagttggcag 143760
Query: 751 gtagttcagaaggtttcgatagtgttgcagagaatatttgtgaaaccattagagttgcag 810
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 143761 gtagttcagaaggtttcgatagtgttgcagagaatatttgtgaaaccattagagttgcag 143820
Query: 811 caaagaatccaaccaattcattcagttgtgttaagttcacaggattggttacaccatcag 870
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 143821 caaagaatccaaccaattcattcagttgtgttaagttcacaggattggttacaccatcag 143880
Query: 871 tattggagaaaatgaatactttagtatccaatgtaacaaccaatgtatcggaattaccaa 930
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 143881 tattggagaaaatgaatactttagtatccaatgtaacaaccaatgtatcggaattaccaa 143940
Query: 931 ttgaatcatttaattcaccattggatttctatttaaatcaatcatcatcattgatgaaac 990
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 143941 ttgaatcatttaattcaccattggatttctatttaaatcaatcatcatcattgatgaaac 144000
Query: 991 aaggaagtgaaccattgttaacaagtaaagatatcaaagagattaaagaattctttaata 1050
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 144001 aaggaagtgaaccattgttaacaagtaaagatatcaaagagattaaagaattctttaata 144060
Query: 1051 gaatggacaagatttttcaattatgtcatcaacgtggtgtaccgattttagtggatgccg 1110
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 144061 gaatggacaagatttttcaattatgtcatcaacgtggtgtaccgattttagtggatgccg 144120
Query: 1111 aacaaagttattatcaagttgcaattcaccatttaacaatgtcctattcaattaagtata 1170
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 144121 aacaaagttattatcaagttgcaattcaccatttaacaatgtcctattcaattaagtata 144180
Query: 1171 ataaagagaaaccaataatttacaatacctatcaaatgtatttagttaatggtatgaatg 1230
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 144181 ataaagagaaaccaataatttacaatacctatcaaatgtatttagttaatggtatgaatg 144240
Query: 1231 tattgaaacaacattttgagctatcgtcatcacaaaagtttaactttaaattgggtgcta 1290
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 144241 tattgaaacaacattttgagctatcgtcatcacaaaagtttaactttaaattgggtgcta 144300
Query: 1291 aaatcgtacgtggtgcttatatggttacagagagtgaacgttctcaaagattgtcaactg 1350
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 144301 aaatcgtacgtggtgcttatatggttacagagagtgaacgttctcaaagattgtcaactg 144360
Query: 1351 aaaatccagtcttaccaacaattcaagatacacatgaaagttataatacagcattggatt 1410
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 144361 aaaatccagtcttaccaacaattcaagatacacataaaagttataatacagcattggatt 144420
Query: 1411 tcttattgaatcaaattaaatccgatccaaattcaattggtctcatgatagcttcacata 1470
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 144421 tcttattgaatcaaattaaatccgatccaaattcaattggtctcatgatagcttcacata 144480
Query: 1471 atgaagattcaatcaatttaggtacaaaattaattaaacaatataaaattgatccaacta 1530
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 144481 atgaagattcaatcaatttaggtacaaaattaattaaacaatataaaattgatccaacta 144540
Query: 1531 atccaaatatacaatttggtcaattatttggtatggccgatttccttagttttaatttgg 1590
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 144541 atccaaatatacaatttggtcaattatttggtatggccgatttccttagttttaatttgg 144600
Query: 1591 tggatcaacatcaaagaattttcaaatatgtaccgtttggtccggttgaagaagttttac 1650
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 144601 tggatcaacatcaaagaattttcaaatatgtaccgtttggtccggttgaagaagttttac 144660
Query: 1651 cttatttaattagaagaatgcatgaaaataaaggtttcattggtagtaatagtga 1705
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 144661 cttatttaattagaagaatgcatgaaaataaaggtttcattggtagtaatagtga 144715
Score = 127 bits (64), Expect(4) = 2e-54
Identities = 64/64 (100%)
Strand = Plus / Plus
Query: 121 gctcattaaaaagtggctttggtacaataaaaagatttaatacaacactaaatcataata 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 142987 gctcattaaaaagtggctttggtacaataaaaagatttaatacaacactaaatcataata 143046
Query: 181 gcag 184
||||
Sbjct: 143047 gcag 143050
Score = 91.7 bits (46), Expect(4) = 2e-54
Identities = 46/46 (100%)
Strand = Plus / Plus
Query: 460 tggatttggatacttcaaaattatatgtttcaaaatcaacaggtga 505
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 143326 tggatttggatacttcaaaattatatgtttcaaaatcaacaggtga 143371
Score = 75.8 bits (38), Expect(4) = 2e-54
Identities = 38/38 (100%)
Strand = Plus / Plus
Query: 302 ttcaacaatttcaacaccaaattcaattttggatacat 339
||||||||||||||||||||||||||||||||||||||
Sbjct: 143168 ttcaacaatttcaacaccaaattcaattttggatacat 143205
Score = 30.2 bits (15), Expect(4) = 2e-54
Identities = 15/15 (100%)
Strand = Plus / Plus
Query: 905 aacaaccaatgtatc 919
|||||||||||||||
Sbjct: 145557 aacaaccaatgtatc 145571
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Number of Sequences: 92845959
Number of Hits to DB: 1,531,393,176
Number of extensions: 93166925
Number of successful extensions: 7394794
Number of sequences better than 10.0: 52
Length of query: 1831
Length of database: 95,242,211,685
Length adjustment: 24
Effective length of query: 1807
Effective length of database: 97,308,875,965
Effective search space: 175837138868755
Effective search space used: 175837138868755
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)
|
| protein update |
2009. 7.14 |
| Homology vs Protein |
Query= Contig-U15071-1 (Contig-U15071-1Q) /CSM_Contig/Contig-U15071-1Q.Seq.d
(1831 letters)
Database: nrp_B
3,236,559 sequences; 1,051,180,864 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
(P92983) RecName: Full=Proline dehydrogenase, mitochondrial; ... 214 1e-53
AY074571_1(AY074571|pid:none) Arabidopsis thaliana At3g30775/MIF... 213 2e-53
D83025_1(D83025|pid:none) Arabidopsis thaliana mRNA for proline ... 213 2e-53
U59508_1(U59508|pid:none) Arabidopsis thaliana osmotic stress-in... 213 2e-53
CP001100_1589(CP001100|pid:none) Chloroherpeton thalassium ATCC ... 212 4e-53
EU956160_1(EU956160|pid:none) Zea mays clone 1558290 proline oxi... 211 7e-53
EU955855_1(EU955855|pid:none) Zea mays clone 1549120 proline oxi... 208 5e-52
CP000383_713(CP000383|pid:none) Cytophaga hutchinsonii ATCC 3340... 202 4e-50
AY492003_1(AY492003|pid:none) Glycine max proline dehydrogenase ... 201 7e-50
CP001141_219(CP001141|pid:none) Phaeodactylum tricornutum CCAP 1... 199 3e-49
AY639146_1(AY639146|pid:none) Nicotiana tabacum proline oxidase/... 197 1e-48
AB011478_3(AB011478|pid:none) Arabidopsis thaliana genomic DNA, ... 196 2e-48
FJ911549_1(FJ911549|pid:none) Capsicum annuum proline oxidase/de... 193 2e-47
BT043950_1(BT043950|pid:none) Salmo salar clone HM4_3055 proline... 191 6e-47
BT051998_1(BT051998|pid:none) Medicago truncatula clone MTYF9_FA... 188 6e-46
AC026758_23(AC026758|pid:none) Oryza sativa chromosome 10 BAC OS... 182 4e-44
AE014298_3248(AE014298|pid:none) Drosophila melanogaster chromos... 182 5e-44
(Q9VRI2) RecName: Full=Proline dehydrogenase, mitochondrial; ... 182 5e-44
AE014298_3255(AE014298|pid:none) Drosophila melanogaster chromos... 182 5e-44
AE014298_3249(AE014298|pid:none) Drosophila melanogaster chromos... 182 5e-44
EF095544_1(EF095544|pid:none) Actinidia deliciosa proline dehydr... 181 6e-44
AB209472_1(AB209472|pid:none) Homo sapiens mRNA for Proline oxid... 180 1e-43
(Q6PAY6) RecName: Full=Probable proline dehydrogenase 2; ... 179 3e-43
BC094736_1(BC094736|pid:none) Homo sapiens proline dehydrogenase... 178 7e-43
BC121809_1(BC121809|pid:none) Homo sapiens proline dehydrogenase... 178 7e-43
(Q9UF13) RecName: Full=Proline dehydrogenase, mitochondrial; ... 178 7e-43
U79754_1(U79754|pid:none) Human proline oxidase 2 (HsPOX2) mRNA,... 178 7e-43
BC118597_1(BC118597|pid:none) Homo sapiens proline dehydrogenase... 178 7e-43
AM398681_1654(AM398681|pid:none) Flavobacterium psychrophilum JI... 177 1e-42
BC068260_1(BC068260|pid:none) Homo sapiens proline dehydrogenase... 176 3e-42
BC076495_1(BC076495|pid:none) Danio rerio zgc:92040, mRNA (cDNA ... 175 4e-42
CP000685_2798(CP000685|pid:none) Flavobacterium johnsoniae UW101... 175 4e-42
CU207366_1475(CU207366|pid:none) Gramella forsetii KT0803 comple... 175 6e-42
U80020_1(U80020|pid:none) Mus musculus brain and kidney proline ... 174 7e-42
BC125327_1(BC125327|pid:none) Mus musculus proline dehydrogenase... 174 7e-42
(O74524) RecName: Full=Probable proline dehydrogenase, mitochond... 173 2e-41
BC088046_1(BC088046|pid:none) Xenopus tropicalis proline dehydro... 172 5e-41
(O45228) RecName: Full=Proline dehydrogenase, mitochondrial; ... 166 3e-39
(A6QQ74) RecName: Full=Probable proline dehydrogenase 2; ... 162 4e-38
CP000140_2187(CP000140|pid:none) Parabacteroides distasonis ATCC... 160 2e-37
(Q8VCZ9) RecName: Full=Probable proline dehydrogenase 2; ... 157 2e-36
AF222851_1(AF222851|pid:none) Mus musculus proline oxidase-like ... 157 2e-36
U80019_1(U80019|pid:none) Mus musculus kidney and liver proline ... 155 6e-36
EU407181_1(EU407181|pid:none) Cucumis sativus proline dehydrogen... 152 3e-35
AM502244_163(AM502244|pid:none) Leishmania infantum chromosome 26. 148 7e-34
(Q2V057) RecName: Full=Probable proline dehydrogenase 2; ... 147 1e-33
AM494963_163(AM494963|pid:none) Leishmania braziliensis chromoso... 145 4e-33
AC159458_6(AC159458|pid:none) Trypanosoma brucei chromosome 7 cl... 144 1e-32
AJ457087_4(AJ457087|pid:none) Photorhabdus luminescens subsp. la... 130 2e-28
AE017345_490(AE017345|pid:none) Cryptococcus neoformans var. neo... 129 3e-28
CP000499_355(CP000499|pid:none) Pichia stipitis CBS 6054 chromos... 129 5e-28
CU633438_15(CU633438|pid:none) Podospora anserina genomic DNA ch... 124 1e-26
AY812072_1(AY812072|pid:none) Schistosoma japonicum SJCHGC04540 ... 123 3e-26
CR380959_195(CR380959|pid:none) Candida glabrata strain CBS138 c... 119 4e-25
AP007154_493(AP007154|pid:none) Aspergillus oryzae RIB40 genomic... 117 1e-24
AM920428_134(AM920428|pid:none) Penicillium chrysogenum Wisconsi... 117 1e-24
CR382137_761(CR382137|pid:none) Debaryomyces hansenii strain CBS... 112 5e-23
AM920427_887(AM920427|pid:none) Penicillium chrysogenum Wisconsi... 108 7e-22
(P09368) RecName: Full=Proline dehydrogenase, mitochondrial; ... 107 1e-21
M18107_1(M18107|pid:none) Yeast (S.cerevisiae) mitochondrial pro... 107 1e-21
FM992692_239(FM992692|pid:none) Candida dubliniensis CD36 chromo... 106 3e-21
AM270241_8(AM270241|pid:none) Aspergillus niger contig An11c0240... 102 5e-20
(Q9BYA7) RecName: Full=Putative proline dehydrogenase-like prote... 100 3e-19
AE016820_206(AE016820|pid:none) Ashbya gossypii (= Eremothecium ... 96 3e-18
FN392319_272(FN392319|pid:none) Pichia pastoris GS115 chromosome... 96 6e-18
AM269954_26(AM269954|pid:none) Aspergillus niger contig An01c007... 94 2e-17
AF010310_1(AF010310|pid:none) Homo sapiens p53 induced protein m... 71 2e-10
BX842649_122(BX842649|pid:none) Bdellovibrio bacteriovorus compl... 66 4e-09
CP000749_4380(CP000749|pid:none) Marinomonas sp. MWYL1, complete... 60 3e-07
BA000022_1791(BA000022|pid:none) Synechocystis sp. PCC 6803 DNA,... 58 1e-06
BA000038_1644(BA000038|pid:none) Vibrio vulnificus YJ016 DNA, ch... 56 5e-06
CP001234_1003(CP001234|pid:none) Vibrio cholerae M66-2 chromosom... 56 5e-06
AE016796_1040(AE016796|pid:none) Vibrio vulnificus CMCP6 chromos... 56 5e-06
CP001486_267(CP001486|pid:none) Vibrio cholerae MJ-1236 chromoso... 56 5e-06
CP000021_838(CP000021|pid:none) Vibrio fischeri ES114 chromosome... 55 7e-06
CP001037_4815(CP001037|pid:none) Nostoc punctiforme PCC 73102, c... 55 1e-05
EF536343_1(EF536343|pid:none) Photobacterium mandapamensis strai... 54 1e-05
CP000236_640(CP000236|pid:none) Ehrlichia chaffeensis str. Arkan... 54 1e-05
BA000032_1726(BA000032|pid:none) Vibrio parahaemolyticus RIMD 22... 54 1e-05
CP001133_949(CP001133|pid:none) Vibrio fischeri MJ11 chromosome ... 54 1e-05
CP000487_1188(CP000487|pid:none) Campylobacter fetus subsp. fetu... 54 2e-05
AE017196_90(AE017196|pid:none) Wolbachia endosymbiont of Drosoph... 54 2e-05
CP000626_169(CP000626|pid:none) Vibrio cholerae O395 chromosome ... 54 2e-05
AY327888_1(AY327888|pid:none) Medicago sativa putative proline o... 54 2e-05
EF536338_1(EF536338|pid:none) Photobacterium leiognathi strain l... 53 3e-05
CR378681_97(CR378681|pid:none) Photobacterium profundum SS9 chro... 53 4e-05
CP000107_367(CP000107|pid:none) Ehrlichia canis str. Jake, compl... 52 7e-05
FM954973_17(FM954973|pid:none) Vibrio splendidus LGP32 chromosom... 52 7e-05
CP000975_712(CP000975|pid:none) Methylacidiphilum infernorum V4,... 52 7e-05
CP001157_1344(CP001157|pid:none) Azotobacter vinelandii DJ, comp... 52 9e-05
CP000744_4683(CP000744|pid:none) Pseudomonas aeruginosa PA7, com... 52 9e-05
CP001390_2580(CP001390|pid:none) Geobacter sp. FRC-32, complete ... 51 1e-04
CP000438_4347(CP000438|pid:none) Pseudomonas aeruginosa UCBPP-PA... 51 1e-04
FM209186_4561(FM209186|pid:none) Pseudomonas aeruginosa LESB58 c... 51 1e-04
AF279106_31(AF279106|pid:none) Uncultured marine gamma proteobac... 51 2e-04
CP000158_2931(CP000158|pid:none) Hyphomonas neptunium ATCC 15444... 51 2e-04
AE017180_3375(AE017180|pid:none) Geobacter sulfurreducens PCA, c... 51 2e-04
CP000117_2927(CP000117|pid:none) Anabaena variabilis ATCC 29413,... 50 3e-04
CP000510_291(CP000510|pid:none) Psychromonas ingrahamii 37, comp... 50 3e-04
CP000240_505(CP000240|pid:none) Synechococcus sp. JA-2-3B'a(2-13... 50 3e-04
CP000951_1055(CP000951|pid:none) Synechococcus sp. PCC 7002, com... 50 4e-04
AC1874(AC1874) 1-pyrroline-5 carboxylate dehydrogenase [imported... 50 4e-04
CP000840_169(CP000840|pid:none) Acaryochloris marina MBIC11017 p... 49 5e-04
AM999887_1089(AM999887|pid:none) Wolbachia endosymbiont of Culex... 49 6e-04
CP000030_403(CP000030|pid:none) Anaplasma marginale str. St. Mar... 49 8e-04
CP000388_2203(CP000388|pid:none) Pseudoalteromonas atlantica T6c... 47 0.002
AE017340_1949(AE017340|pid:none) Idiomarina loihiensis L2TR, com... 47 0.002
CP001291_982(CP001291|pid:none) Cyanothece sp. PCC 7424, complet... 47 0.002
CR767821_399(CR767821|pid:none) Ehrlichia ruminantium strain Wel... 47 0.002
CP000733_597(CP000733|pid:none) Coxiella burnetii Dugway 5J108-1... 47 0.002
AL111168_1428(AL111168|pid:none) Campylobacter jejuni subsp. jej... 47 0.002
CP001391_122(CP001391|pid:none) Wolbachia sp. wRi, complete geno... 47 0.002
AE016828_547(AE016828|pid:none) Coxiella burnetii RSA 493, compl... 47 0.002
AP009180_77(AP009180|pid:none) Candidatus Carsonella ruddii PV D... 47 0.003
CP001197_2127(CP001197|pid:none) Desulfovibrio vulgaris str. 'Mi... 47 0.003
CP000890_656(CP000890|pid:none) Coxiella burnetii RSA 331, compl... 47 0.003
CP001287_116(CP001287|pid:none) Cyanothece sp. PCC 8801, complet... 47 0.003
CP000285_1239(CP000285|pid:none) Chromohalobacter salexigens DSM... 47 0.003
CP000768_1532(CP000768|pid:none) Campylobacter jejuni subsp. doy... 47 0.003
AM260522_1404(AM260522|pid:none) Helicobacter acinonychis str. S... 46 0.004
CP000450_1798(CP000450|pid:none) Nitrosomonas eutropha C91, comp... 46 0.004
AE017125_156(AE017125|pid:none) Helicobacter hepaticus ATCC 5144... 46 0.004
AE001439_48(AE001439|pid:none) Helicobacter pylori J99, complete... 46 0.005
EU682990_1(EU682990|pid:none) Francisella philomiragia subsp. ph... 46 0.005
CP000931_3550(CP000931|pid:none) Shewanella halifaxensis HAW-EB4... 46 0.005
CP000323_1135(CP000323|pid:none) Psychrobacter cryohalolentis K5... 46 0.005
CP000821_3837(CP000821|pid:none) Shewanella sediminis HAW-EB3, c... 46 0.005
CP000449_395(CP000449|pid:none) Maricaulis maris MCS10, complete... 45 0.007
CP000377_1695(CP000377|pid:none) Silicibacter sp. TM1040, comple... 45 0.007
A87349(A87349) hypothetical protein CC0804 [imported] - Caulobac... 45 0.007
CP000507_2666(CP000507|pid:none) Shewanella amazonensis SB2B, co... 45 0.007
AM233362_804(AM233362|pid:none) Francisella tularensis subsp. ho... 45 0.012
CP000806_1593(CP000806|pid:none) Cyanothece sp. ATCC 51142 circu... 45 0.012
CP000447_566(CP000447|pid:none) Shewanella frigidimarina NCIMB 4... 45 0.012
EU682992_1(EU682992|pid:none) Francisella philomiragia subsp. ph... 45 0.012
CP000608_970(CP000608|pid:none) Francisella tularensis subsp. tu... 45 0.012
CP000316_403(CP000316|pid:none) Polaromonas sp. JS666, complete ... 45 0.012
CP001217_50(CP001217|pid:none) Helicobacter pylori P12, complete... 45 0.012
CP000437_667(CP000437|pid:none) Francisella tularensis subsp. ho... 45 0.012
CP001072_53(CP001072|pid:none) Helicobacter pylori Shi470, compl... 45 0.012
AE000511_55(AE000511|pid:none) Helicobacter pylori 26695, comple... 45 0.012
CP000851_3474(CP000851|pid:none) Shewanella pealeana ATCC 700345... 45 0.012
CP000803_686(CP000803|pid:none) Francisella tularensis subsp. ho... 45 0.012
CP000439_1106(CP000439|pid:none) Francisella tularensis subsp. n... 45 0.012
CP000915_673(CP000915|pid:none) Francisella tularensis subsp. me... 45 0.012
CP000514_2022(CP000514|pid:none) Marinobacter aquaeolei VT8, com... 44 0.015
CP001124_2388(CP001124|pid:none) Geobacter bemidjiensis Bem, com... 44 0.015
CP001173_50(CP001173|pid:none) Helicobacter pylori G27, complete... 44 0.015
EU682991_1(EU682991|pid:none) Francisella philomiragia subsp. ph... 44 0.020
CP001096_1733(CP001096|pid:none) Rhodopseudomonas palustris TIE-... 44 0.020
CP000444_843(CP000444|pid:none) Shewanella sp. MR-7, complete ge... 44 0.020
EU682993_1(EU682993|pid:none) Francisella philomiragia subsp. ph... 44 0.020
CP000903_4717(CP000903|pid:none) Bacillus weihenstephanensis KBA... 44 0.020
CP000544_546(CP000544|pid:none) Halorhodospira halophila SL1, co... 44 0.020
CP000713_1545(CP000713|pid:none) Psychrobacter sp. PRwf-1, compl... 44 0.026
CP000675_1774(CP000675|pid:none) Legionella pneumophila str. Cor... 44 0.026
CP000082_1249(CP000082|pid:none) Psychrobacter arcticus 273-4, c... 44 0.026
CP000302_682(CP000302|pid:none) Shewanella denitrificans OS217, ... 44 0.026
CP000830_2298(CP000830|pid:none) Dinoroseobacter shibae DFL 12, ... 43 0.034
AY084076_1(AY084076|pid:none) Bacillus subtilis proline dehydrog... 43 0.034
CP000462_747(CP000462|pid:none) Aeromonas hydrophila subsp. hydr... 43 0.044
CP000362_2335(CP000362|pid:none) Roseobacter denitrificans OCh 1... 43 0.044
CR628337_1665(CR628337|pid:none) Legionella pneumophila str. Len... 43 0.044
CP000393_3009(CP000393|pid:none) Trichodesmium erythraeum IMS101... 43 0.044
CP000127_1623(CP000127|pid:none) Nitrosococcus oceani ATCC 19707... 43 0.044
CP000753_861(CP000753|pid:none) Shewanella baltica OS185, comple... 42 0.057
EU682994_1(EU682994|pid:none) Francisella noatunensis subsp. ori... 42 0.057
CR522870_2492(CR522870|pid:none) Desulfotalea psychrophila LSv54... 42 0.057
CP000927_1036(CP000927|pid:none) Caulobacter sp. K31, complete g... 42 0.057
FJ217169_1(FJ217169|pid:none) Francisella noatunensis subsp. ori... 42 0.057
BA000012_917(BA000012|pid:none) Mesorhizobium loti MAFF303099 DN... 42 0.075
CP001189_871(CP001189|pid:none) Gluconacetobacter diazotrophicus... 42 0.075
CP000463_4280(CP000463|pid:none) Rhodopseudomonas palustris BisA... 42 0.075
AM889285_2670(AM889285|pid:none) Gluconacetobacter diazotrophicu... 42 0.075
CP000698_1843(CP000698|pid:none) Geobacter uraniireducens Rf4, c... 42 0.098
(Q8L2I5) RecName: Full=Proline dehydrogenase 2; Short=P... 42 0.098
CP000250_3927(CP000250|pid:none) Rhodopseudomonas palustris HaA2... 42 0.098
CP001087_1235(CP001087|pid:none) Desulfobacterium autotrophicum ... 42 0.098
CP000606_614(CP000606|pid:none) Shewanella loihica PV-4, complet... 42 0.098
CP000563_3398(CP000563|pid:none) Shewanella baltica OS155, compl... 41 0.13
CP000891_908(CP000891|pid:none) Shewanella baltica OS195, comple... 41 0.13
T31343(T31343) proline dehydrogenase (EC 1.5.99.8) - Bradyrhizob... 41 0.13
CP001252_880(CP001252|pid:none) Shewanella baltica OS223, comple... 41 0.13
BA000043_3010(BA000043|pid:none) Geobacillus kaustophilus HTA426... 41 0.13
CP001321_1214(CP001321|pid:none) Haemophilus parasuis SH0165, co... 41 0.13
AP009153_2853(AP009153|pid:none) Gemmatimonas aurantiaca T-27 DN... 41 0.13
CP000394_110(CP000394|pid:none) Granulibacter bethesdensis CGDNI... 41 0.17
CP000143_749(CP000143|pid:none) Rhodobacter sphaeroides 2.4.1 ch... 41 0.17
BX572598_10(BX572598|pid:none) Rhodopseudomonas palustris CGA009... 40 0.22
CP000390_1316(CP000390|pid:none) Mesorhizobium sp. BNC1, complet... 40 0.22
CP000764_3424(CP000764|pid:none) Bacillus cereus subsp. cytotoxi... 40 0.22
EU016636_21(EU016636|pid:none) Uncultured Group I marine crenarc... 40 0.28
CP000569_106(CP000569|pid:none) Actinobacillus pleuropneumoniae ... 40 0.28
AB041353_1(AB041353|pid:none) Nicotiana tabacum cig1 mRNA, parti... 40 0.28
AE016877_4768(AE016877|pid:none) Bacillus cereus ATCC 14579, com... 40 0.28
AE008923_3840(AE008923|pid:none) Xanthomonas axonopodis pv. citr... 40 0.28
AM039952_4008(AM039952|pid:none) Xanthomonas campestris pv. vesi... 40 0.28
CP001016_2722(CP001016|pid:none) Beijerinckia indica subsp. indi... 40 0.37
CP000577_829(CP000577|pid:none) Rhodobacter sphaeroides ATCC 170... 40 0.37
AE008922_3785(AE008922|pid:none) Xanthomonas campestris pv. camp... 40 0.37
AM920689_4060(AM920689|pid:none) Xanthomonas campestris pv. camp... 40 0.37
CP001635_4752(CP001635|pid:none) Variovorax paradoxus S110 chrom... 40 0.37
CP001150_476(CP001150|pid:none) Rhodobacter sphaeroides KD131 ch... 40 0.37
AE017194_5113(AE017194|pid:none) Bacillus cereus ATCC 10987, com... 39 0.49
CP000908_314(CP000908|pid:none) Methylobacterium extorquens PA1,... 39 0.49
CP000967_625(CP000967|pid:none) Xanthomonas oryzae pv. oryzae PX... 39 0.49
AE013598_4057(AE013598|pid:none) Xanthomonas oryzae pv. oryzae K... 39 0.49
CP000943_2075(CP000943|pid:none) Methylobacterium sp. 4-46, comp... 39 0.49
CU468230_2018(CU468230|pid:none) Acinetobacter baumannii str. SD... 39 0.49
CP000922_2457(CP000922|pid:none) Anoxybacillus flavithermus WK1,... 39 0.63
CP000478_826(CP000478|pid:none) Syntrophobacter fumaroxidans MPO... 39 0.63
CP000817_1094(CP000817|pid:none) Lysinibacillus sphaericus C3-41... 39 0.63
AP009608_247(AP009608|pid:none) Mycoplasma fermentans PG18 DNA, ... 39 0.83
CP000687_105(CP000687|pid:none) Actinobacillus pleuropneumoniae ... 39 0.83
CP001172_1909(CP001172|pid:none) Acinetobacter baumannii AB307-0... 38 1.1
CU459141_1989(CU459141|pid:none) Acinetobacter baumannii str. AY... 38 1.1
(O32179) RecName: Full=Proline dehydrogenase 1; Short=P... 38 1.1
CP001392_1400(CP001392|pid:none) Diaphorobacter sp. TPSY, comple... 38 1.1
CU234118_6531(CU234118|pid:none) Bradyrhizobium sp. ORS278,compl... 38 1.1
CP000157_2293(CP000157|pid:none) Erythrobacter litoralis HTCC259... 38 1.1
CP000863_1574(CP000863|pid:none) Acinetobacter baumannii ACICU, ... 38 1.1
(Q5AD73) RecName: Full=Sorting nexin-41; 38 1.4
CP000886_3806(CP000886|pid:none) Salmonella enterica subsp. ente... 37 1.8
AE006468_3048(AE006468|pid:none) Salmonella enterica subsp. ente... 37 1.8
CP001389_1991(CP001389|pid:none) Rhizobium sp. NGR234, complete ... 37 1.8
CP000539_2325(CP000539|pid:none) Acidovorax sp. JS42, complete g... 37 1.8
CP000026_2804(CP000026|pid:none) Salmonella enterica subsp. ente... 37 1.8
AE017220_3079(AE017220|pid:none) Salmonella enterica subsp. ente... 37 1.8
AL844505_60(AL844505|pid:none) Plasmodium falciparum 3D7 chromos... 37 1.8
AM933172_2967(AM933172|pid:none) Salmonella enterica subsp. ente... 37 1.8
CP000716_255(CP000716|pid:none) Thermosipho melanesiensis BI429,... 37 2.4
AM295250_1360(AM295250|pid:none) Staphylococcus carnosus subsp. ... 37 3.1
AM942759_1599(AM942759|pid:none) Proteus mirabilis strain HI4320... 37 3.1
CP000151_113(CP000151|pid:none) Burkholderia sp. 383 chromosome ... 37 3.1
CP001472_1273(CP001472|pid:none) Acidobacterium capsulatum ATCC ... 37 3.1
(P53140) RecName: Full=Protein RMD9, mitochondrial; AltName: Ful... 37 3.1
CP000356_2752(CP000356|pid:none) Sphingopyxis alaskensis RB2256,... 37 3.1
AE017042_1496(AE017042|pid:none) Yersinia pestis biovar Microtus... 36 4.1
AM236086_549(AM236086|pid:none) Rhizobium leguminosarum bv. vici... 36 4.1
AM286415_1837(AM286415|pid:none) Yersinia enterocolitica subsp. ... 36 4.1
AE017224_475(AE017224|pid:none) Brucella abortus biovar 1 str. 9... 36 4.1
CP000489_937(CP000489|pid:none) Paracoccus denitrificans PD1222 ... 36 4.1
CP001192_849(CP001192|pid:none) Rhizobium leguminosarum bv. trif... 36 4.1
CP000668_1241(CP000668|pid:none) Yersinia pestis Pestoides F, co... 36 4.1
(Q0AYQ7) RecName: Full=UDP-N-acetylmuramate--L-alanine ligase; ... 36 4.1
CP000950_2332(CP000950|pid:none) Yersinia pseudotuberculosis YPI... 36 4.1
(Q8RMG1) RecName: Full=Proline dehydrogenase 1; Short=P... 36 4.1
CP001281_540(CP001281|pid:none) Thauera sp. MZ1T, complete genome. 36 4.1
BA000021_434(BA000021|pid:none) Wigglesworthia glossinidia endos... 36 4.1
CP001298_331(CP001298|pid:none) Methylobacterium chloromethanicu... 36 4.1
CP000653_1530(CP000653|pid:none) Enterobacter sp. 638, complete ... 36 4.1
CP000270_4340(CP000270|pid:none) Burkholderia xenovorans LB400 c... 36 5.4
CP000647_1015(CP000647|pid:none) Klebsiella pneumoniae subsp. pn... 36 5.4
CP000964_3453(CP000964|pid:none) Klebsiella pneumoniae 342, comp... 36 5.4
CP001196_2717(CP001196|pid:none) Oligotropha carboxidovorans OM5... 36 5.4
CP001052_3821(CP001052|pid:none) Burkholderia phytofirmans PsJN ... 36 5.4
CP001184_412(CP001184|pid:none) Ureaplasma urealyticum serovar 1... 36 5.4
CP001503_77(CP001503|pid:none) Burkholderia glumae BGR1 chromoso... 35 7.0
CP001283_886(CP001283|pid:none) Bacillus cereus AH820, complete ... 35 7.0
CP001013_1619(CP001013|pid:none) Leptothrix cholodnii SP-6, comp... 35 7.0
BA000021_79(BA000021|pid:none) Wigglesworthia glossinidia endosy... 35 7.0
CP001638_2673(CP001638|pid:none) Geobacillus sp. WCH70, complete... 35 7.0
CP001001_3011(CP001001|pid:none) Methylobacterium radiotolerans ... 35 7.0
CP000453_2683(CP000453|pid:none) Alkalilimnicola ehrlichii MLHE-... 35 7.0
CP000103_1540(CP000103|pid:none) Nitrosospira multiformis ATCC 2... 35 9.2
CP001389_97(CP001389|pid:none) Rhizobium sp. NGR234, complete ge... 35 9.2
AE016825_1538(AE016825|pid:none) Chromobacterium violaceum ATCC ... 35 9.2
AE017198_970(AE017198|pid:none) Lactobacillus johnsonii NCC 533,... 35 9.2
>(P92983) RecName: Full=Proline dehydrogenase, mitochondrial;
EC=1.5.99.8; AltName: Full=Proline oxidase; AltName:
Full=Osmotic stress-induced proline dehydrogenase; Flags:
Precursor; &AB028614_19(AB028614|pid:none)
Length = 499
Score = 214 bits (544), Expect = 1e-53
Identities = 148/460 (32%), Positives = 250/460 (54%), Gaps = 23/460 (5%)
Frame = +3
Query: 435 PNNQNNNKLDL-DTSKLYVSKSTGELFFTFMILKVCSINFISD-----NSQKFLNLFDKL 596
P Q+++ LDL D ++L+ S T +L + +L +I + D S K ++
Sbjct: 55 PTEQSHDGLDLSDQARLFSSIPTSDLLRSTAVLHAAAIGPMVDLGTWVMSSKLMDASVTR 114
Query: 597 GLSKPLNFFIKYSFFKQFCAGETIRETEIFTEKLNKL----GIGTILDYAIEELAGSSEG 764
G+ L +K +F+ FCAGE + + E++ + G+ +L Y +E A +
Sbjct: 115 GMVLGL---VKSTFYDHFCAGE---DADAAAERVRSVYEATGLKGMLVYGVEH-ADDAVS 167
Query: 765 FDSVAENICETIRVAAKNPTNSFSCV--KFTGLVTPSVLEKMNTLVS--------NVTTN 914
D + TI A PT+ FS V K T + S+L++++ L+ ++
Sbjct: 168 CDDNMQQFIRTIEAAKSLPTSHFSSVVVKITAICPISLLKRVSDLLRWEYKSPNFKLSWK 227
Query: 915 VSELPIESFNSPLDFYLNQSSSLMKQGSEPLLTSKDIKEIKEFFNRMDKIFQLCHQRGVP 1094
+ P+ S +SPL ++ N EPL T+++ +E++ R+ +I + C + VP
Sbjct: 228 LKSFPVFSESSPL-YHTNSEP-------EPL-TAEEERELEAAHGRIQEICRKCQESNVP 278
Query: 1095 ILVDAEQSYYQVAIHHLTMSYSIKYN--KEKPIIYNTYQMYLVNGMNVLKQHFELSSSQK 1268
+L+DAE + Q AI ++ S +I +N K++PI+YNT Q YL + L H + +++K
Sbjct: 279 LLIDAEDTILQPAIDYMAYSSAIMFNADKDRPIVYNTIQAYLRDAGERL--HLAVQNAEK 336
Query: 1269 FNFKLGAKIVRGAYMVTESERSQRLSTENPVLPTIQDTHESYNTALDFLLNQIKSDPNSI 1448
N +G K+VRGAYM +E+ + L ++PV TIQDTH YN + FL+ + S+ +
Sbjct: 337 ENVPMGFKLVRGAYMSSEASLADSLGCKSPVHDTIQDTHSCYNDCMTFLMEKA-SNGSGF 395
Query: 1449 GLMIASHNEDSINLGTKLIKQYKIDPTNPNIQFGQLFGMADFLSFNLVDQHQRIFKYVPF 1628
G+++A+HN DS L ++ ID N I+F QL+GM+D LSF L + KY+PF
Sbjct: 396 GVVLATHNADSGRLASRKASDLGIDKQNGKIEFAQLYGMSDALSFGLKRAGFNVSKYMPF 455
Query: 1629 GPVEEVLPYLIRRMHENKGFIGSNS-DKELFYLKKEIKRR 1745
GPV +PYL+RR +EN+G + + + D++L ++ E+KRR
Sbjct: 456 GPVATAIPYLLRRAYENRGMMATGAHDRQL--MRMELKRR 493
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3236559
Number of Hits to DB: 2,358,304,885
Number of extensions: 43660453
Number of successful extensions: 119347
Number of sequences better than 10.0: 268
Number of HSP's gapped: 119089
Number of HSP's successfully gapped: 293
Length of query: 610
Length of database: 1,051,180,864
Length adjustment: 135
Effective length of query: 475
Effective length of database: 614,245,399
Effective search space: 291766564525
Effective search space used: 291766564525
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)
|
| PSORT |
|
| VS (DIR, S) |
1 |
| VH (FL, L) |
0 |
| VF (FL, S) |
0 |
| AH (FL, L) |
0 |
| AF (FL, S) |
0 |
| SL (DIR, L) |
1 |
| SS (DIR, S) |
2 |
| SH (FL, L) |
1 |
| SF (FL, S) |
0 |
| CH (FL, L) |
0 |
| CF (FL, S) |
1 |
| FCL (DIR, L) |
0 |
| FC (DIR, S) |
1 |
| FC-IC (SUB) |
0 |