NBDC - アーカイブトップ - ヘルプ
データベースの説明 | データ項目の説明 | 利用許諾 | ヘルプ
Dicty_cDB
Contig List | Clone List | cDNA Library List
Atlas
Atlas | Atlas Image List
NBDC - LSDB Archive
Description of this DB | Description of data items | Download | License
Dicty_cDB
Contig List | Clone List | cDNA Library List
Atlas
Atlas | Atlas Image List
Contig-U15058-1
Contig ID Contig-U15058-1
Contig update 2004. 6.11
Contig sequence 
>Contig-U15058-1 (Contig-U15058-1Q) /CSM_Contig/Contig-U15058-1Q.Seq.d
AAAAAAGGTTACTCACAAAGTTAAAGAAATCAATGAAAGATTTACCACCC
TATAAATTATTGGATCATCCTTTCTTTGATTCATTAAAAGTTTGTCCAAA
TGATTGTTTACCTTTAAATTCAATTAGAATTTCAACCAATGGTATAGTTC
CTAAAGAATTCCCAAAACCTCTATCACCTATTTTTGAAAAGAATAATATA
ATAAGTATACCATCATCACCAATATCAACTACCACTACTACTTTCCCCAC
CACACCCACAATAAAGTCAACAACGAAAAAAATATCGAAAACAATAGTGA
TACCATCTTCACCAAGTTTAGCTTTACCACCAAATTTAAGTGTTAAATCT
CCATTTGCACCACCAAGTAAAAAACAATTACAACAATATCAGCAACAACA
AAAACAACAAACAATATCAATGTTTAAATATGATGATGAAGAAGAAAAGG
AAGAAGAGGAAAAAGAAAAAGAAAAAGAAAAAGAAAAAGAAAAAGAAAAA
GAAGAAGAAGGAGAAGAAGGAAATATACCAAAAGAAAAATTAATATTAAA
AATGACACCAAAGCCATATATATTTATTCATCATTTCTCACCAAATTCAC
TTGGGCCTCTATCGCCACCCTCATCAACATCTTCCACACTGCTTGGAGCA
TTATCACAAGAAAAGTTTGAAAAAAAACAAAGACAAATCCAAGATTCTGA
AAAGGTCAACAAAAATGAGGAAGAAAATCAAACAAAAGATGATGCTGATA
ACATTTCACCTCCTTTGCCTCATGCAATAAAGAAAAGTATTTACAATAAT
AAAAACAATCACCAAAAAATTTCAACTAATACAATCATTAAAACTCCAAT
TAAAGCTCCAATTAAAACAATAACTCAAATACCAACCGAGACACCAAATA
AAATACCAAATAAAACAATCTCTCAATCAAATCCGGTGATCATAAGAGAT
GAAACACCTCAAAAAGGTATTCCTTTTGAAAAAAGGTAGTTTCAACTCCA
TTGATATACAAAGAACGACCACATTTCGTATTTTTAAAAAAAGCAAAACT
TTCATCAAATAGCAACAACAAAGAAAATATAATCAACTTTCACAACAACA
ACAACAACAACAACAACAACAACAACAACAACAACAACAACAACAACAAC
AACAACAACAACAACAACAACAACAAAGATTCATACAATGAAAAAGGAAA
TGCAACTTCTTATTGCAATGGCGATGATGATGACGATGACTTTAAAATTG
ATCACAAAGAGAACGGAGNTAGNGGGTTTATAATAGAAAAAGATCATGAG
TTTATTGGTGATAAAGAAAATAGGAAAGAGAAGCAAAAGGGCTCTAAACG
AGGTCAAGATAAAGCCTGGCAAGAACTCAATGCATTTCTTCGTAAAAATC
CAACTCAAGGGGGTAGGAGAATAAAATCAACCGATTATCCAGCTTTAAGC
GACCTTTTTCCCAAAGGTATTCCTTTTGAAAAAAGGTAGTTTCAACTCCA
TTGATATACAAAGAACGACCACATTTCGTATTTTTAAAAAAAGCAAAACT
TTCATCAAATAGCAACAACAAAGAAAATATAATCAACTTTCACAACAACA
ACAACAACAACAACAACAACAACAACAACAACAACAACAACAACAACAAC
AACAACAACAACAACAACAACAACAAAGATTCATACAATGAAAAAGGAAA
TGCAACTTCTTATTGCAATGGCGATGATGATGACGATGACTTTAAAATTG
ATCACAAAGAGAACGTAGTTAGTGGTTTTTTAATAGAAAAAGATCATGAG
TTTATTGGTGATAAAGAAAATAGTAAAGAGAAGCAAAAGGTCTCTAAACG
AGTTCAAGATAAAGCCTGGCAAGAACTCAATGCATTTCTTCGTAAAAATC
CAACTCAAGGGGGTAGGAGAATAAAATCAACCGATTATCCAGGCNTTAAG
CGACCTTTTTCCCAAAAAAAAAAGATGTTCAGAAAAT
Gap no gap
Contig length 1987
Chromosome number (1..6, M) 4
Chromosome length 5430582
Start point 4423139
End point 4424727
Strand (PLUS/MINUS) PLUS
Number of clones 2
Number of EST 4
Link to clone list U15058
List of clone(s) 

est1=SFG262F,1,508
est2=CFG393F,418,1044
est3=SFG262H,966,1966
est4=SFG262Z,1605,1987
Translated Amino Acid sequence 
KRLLTKLKKSMKDLPPYKLLDHPFFDSLKVCPNDCLPLNSIRISTNGIVPKEFPKPLSPI
FEKNNIISIPSSPISTTTTTFPTTPTIKSTTKKISKTIVIPSSPSLALPPNLSVKSPFAP
PSKKQLQQYQQQQKQQTISMFKYDDEEEKEEEEKEKEKEKEKEKEKEEEGEEGNIPKEKL
ILKMTPKPYIFIHHFSPNSLGPLSPPSSTSSTLLGALSQEKFEKKQRQIQDSEKVNKNEE
ENQTKDDADNISPPLPHAIKKSIYNNKNNHQKISTNTIIKTPIKAPIKTITQIPTETPNK
IPNKTISQSNPVIIRDETPQKGIPFEKR*fqlh*ytkndhisyf*kkqnfhqiattkki*
stfttttttttttttttttttttttttttttkihtmkkemqlliamammmtmtlklitkr
texxgl**kkimsllvikkigkrskralnevkikpgknsmhffvkiqlkgvge*nqpiiq
l*atffpkvfllkkgsfnsidiqrtttfrifkksktfik*qqqrkynqlsqqqqqqqqqq
qqqqqqqqqqqqqqqqqqrfiq*krkcnfllqwr***r*l*n*sqrers*wffnrkrs*v
yw**rk**reakgl*tssr*slartqciss*ksnsrg*enkinrlsrx*atffpkkkdvq
k
Translated Amino Acid sequence (All Frames) 
Frame A:
kkgysqs*rnq*kiyhpinywiilslih*kfvqmivyl*iqlefqpmv*flknsqnlyhl
flkrii**vyhhhqyqlplllspphpq*sqqrkkyrkq**yhlhqv*lyhqi*vlnlhlh
hqvknnynnisnnknnkqyqclnmmmkkkrkkrkkkkkkkkkkkkkkkkkekkeiyqkkn
*y*k*hqshiylfiishqihlglyrhphqhlphclehyhkkslkknkdkskilkrstkmr
kkikqkmmlitfhllclmq*rkvftiiktitkkfqliqslklqlklqlkq*lkyqprhqi
kyqikqslnqir*s*emkhlkkvfllkkgsfnsidiqrtttfrifkksktfik*qqqrky
nqlsqqqqqqqqqqqqqqqqqqqqqqqqqqqqrfiq*krkcnfllqwr***r*l*n*sqr
erx*xvynrkrs*vyw**rk*ereakgl*trsr*slartqciss*ksnsrg*enkinrls
sfkrpfsqrysf*kkvvstpliykerphfvflkkaklssnsnnkeniinfhnnnnnnnnn
nnnnnnnnnnnnnnnnnnkdsynekgnatsycngddddddfkidhkenvvsgfliekdhe
figdkenskekqkvskrvqdkawqelnaflrknptqggrrikstdypgxkrpfsqkkkmf
rk


Frame B:
kkvthkvkeinerfttl*iigssfl*fikslsk*lftfkfn*nfnqwyss*ripktsity
f*ke*ynkytiitninyhyyfphhthnkvnnekniennsdtiftkfsfttkfkc*isict
tk*ktittisattkttnninv*i***rrkgrrgkrkrkrkrkrkrkrrrrrrrkytkrki
nikndtkaiyiyssfltkftwasiatlinifhtawsiitrkv*kktktnprf*kgqqk*g
rksnkr*c**hftsfascnkekylq**kqspknfn*ynh*nsn*ssn*nnnsntnrdtk*
ntk*nnlsiksgdhkr*ntskrysf*kkvvstpliykerphfvflkkaklssnsnnkeni
infhnnnnnnnnnnnnnnnnnnnnnnnnnnnkdsynekgnatsycngddddddfkidhke
ngxxgfiiekdhefigdkenrkekqkgskrgqdkawqelnaflrknptqggrrikstdyp
alsdlfpkgipfekr*fqlh*ytkndhisyf*kkqnfhqiattkki*stftttttttttt
ttttttttttttttttttkihtmkkemqlliamammmtmtlklitkrt*lvvf**kkims
llvikkivkrskrslnefkikpgknsmhffvkiqlkgvge*nqpiiqalsdlfpkkkrcs
en


Frame C:
KRLLTKLKKSMKDLPPYKLLDHPFFDSLKVCPNDCLPLNSIRISTNGIVPKEFPKPLSPI
FEKNNIISIPSSPISTTTTTFPTTPTIKSTTKKISKTIVIPSSPSLALPPNLSVKSPFAP
PSKKQLQQYQQQQKQQTISMFKYDDEEEKEEEEKEKEKEKEKEKEKEEEGEEGNIPKEKL
ILKMTPKPYIFIHHFSPNSLGPLSPPSSTSSTLLGALSQEKFEKKQRQIQDSEKVNKNEE
ENQTKDDADNISPPLPHAIKKSIYNNKNNHQKISTNTIIKTPIKAPIKTITQIPTETPNK
IPNKTISQSNPVIIRDETPQKGIPFEKR*fqlh*ytkndhisyf*kkqnfhqiattkki*
stfttttttttttttttttttttttttttttkihtmkkemqlliamammmtmtlklitkr
texxgl**kkimsllvikkigkrskralnevkikpgknsmhffvkiqlkgvge*nqpiiq
l*atffpkvfllkkgsfnsidiqrtttfrifkksktfik*qqqrkynqlsqqqqqqqqqq
qqqqqqqqqqqqqqqqqqrfiq*krkcnfllqwr***r*l*n*sqrers*wffnrkrs*v
yw**rk**reakgl*tssr*slartqciss*ksnsrg*enkinrlsrx*atffpkkkdvq
k
own update 2004. 6.23
Homology vs CSM-cDNA 
Query= Contig-U15058-1 (Contig-U15058-1Q)
/CSM_Contig/Contig-U15058-1Q.Seq.d
         (1987 letters)

Database: CSM
           8402 sequences; 8,075,542 total letters


                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

Contig-U15058-1 (Contig-U15058-1Q) /CSM_Contig/Conti...  1009  0.0
Contig-U15745-1 (Contig-U15745-1Q) /CSM_Contig/Conti...    40  0.013
Contig-U10911-1 (Contig-U10911-1Q) /CSM_Contig/Conti...    40  0.013
Contig-U09577-1 (Contig-U09577-1Q) /CSM_Contig/Conti...    40  0.013
Contig-U15610-1 (Contig-U15610-1Q) /CSM_Contig/Conti...    38  0.051
Contig-U15270-1 (Contig-U15270-1Q) /CSM_Contig/Conti...    38  0.051
Contig-U14467-1 (Contig-U14467-1Q) /CSM_Contig/Conti...    38  0.051
Contig-U12416-1 (Contig-U12416-1Q) /CSM_Contig/Conti...    38  0.051
Contig-U11236-1 (Contig-U11236-1Q) /CSM_Contig/Conti...    38  0.051
Contig-U09571-1 (Contig-U09571-1Q) /CSM_Contig/Conti...    38  0.051

>Contig-U15058-1 (Contig-U15058-1Q) /CSM_Contig/Contig-U15058-1Q.Seq.d
          Length = 1987

 Score = 1009 bits (509), Expect = 0.0
 Identities = 539/554 (97%)
 Strand = Plus / Plus

                                                                        
Query: 538  aattaatattaaaaatgacaccaaagccatatatatttattcatcatttctcaccaaatt 597
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 538  aattaatattaaaaatgacaccaaagccatatatatttattcatcatttctcaccaaatt 597

                                                                        
Query: 598  cacttgggcctctatcgccaccctcatcaacatcttccacactgcttggagcattatcac 657
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 598  cacttgggcctctatcgccaccctcatcaacatcttccacactgcttggagcattatcac 657

                                                                        
Query: 658  aagaaaagtttgnnnnnnnncaaagacaaatccaagattctgaaaaggtcaacaaaaatg 717
            ||||||||||||        ||||||||||||||||||||||||||||||||||||||||
Sbjct: 658  aagaaaagtttgaaaaaaaacaaagacaaatccaagattctgaaaaggtcaacaaaaatg 717

                                                                        
Query: 718  aggaagaaaatcaaacaaaagatgatgctgataacatttcacctcctttgcctcatgcaa 777
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 718  aggaagaaaatcaaacaaaagatgatgctgataacatttcacctcctttgcctcatgcaa 777

                                                                        
Query: 778  taaagaaaagtatttacaataataaaaacaatcaccaaaaaatttcaactaatacaatca 837
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 778  taaagaaaagtatttacaataataaaaacaatcaccaaaaaatttcaactaatacaatca 837

                                                                        
Query: 838  ttaaaactccaattaaagctccaattaaaacaataactcaaataccaaccgagacaccaa 897
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 838  ttaaaactccaattaaagctccaattaaaacaataactcaaataccaaccgagacaccaa 897

                                                                        
Query: 898  ataaaataccaaataaaacaatctctcaatcaaatccggtgatcataagagatgaaacac 957
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 898  ataaaataccaaataaaacaatctctcaatcaaatccggtgatcataagagatgaaacac 957

                                                                        
Query: 958  ctcaaaaaggtattccttttgaaaaaaggtagtttcaactccattgatatacaaagaacg 1017
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 958  ctcaaaaaggtattccttttgaaaaaaggtagtttcaactccattgatatacaaagaacg 1017

                                                                        
Query: 1018 accacatttcgtatttttnnnnnnngcaaaactttcatcaaatagcaacaacaaagaaaa 1077
            ||||||||||||||||||       |||||||||||||||||||||||||||||||||||
Sbjct: 1018 accacatttcgtatttttaaaaaaagcaaaactttcatcaaatagcaacaacaaagaaaa 1077

                          
Query: 1078 tataatcaactttc 1091
            ||||||||||||||
Sbjct: 1078 tataatcaactttc 1091


 Score =  769 bits (388), Expect = 0.0
 Identities = 408/415 (98%)
 Strand = Plus / Plus

                                                                        
Query: 1177 agattcatacaatgaaaaaggaaatgcaacttcttattgcaatggcgatgatgatgacga 1236
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1177 agattcatacaatgaaaaaggaaatgcaacttcttattgcaatggcgatgatgatgacga 1236

                                                                        
Query: 1237 tgactttaaaattgatcacaaagagaacggagntagngggtttataatagaaaaagatca 1296
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1237 tgactttaaaattgatcacaaagagaacggagntagngggtttataatagaaaaagatca 1296

                                                                        
Query: 1297 tgagtttattggtgataaagaaaataggaaagagaagcaaaagggctctaaacgaggtca 1356
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1297 tgagtttattggtgataaagaaaataggaaagagaagcaaaagggctctaaacgaggtca 1356

                                                                        
Query: 1357 agataaagcctggcaagaactcaatgcatttcttcgtaaaaatccaactcaagggggtag 1416
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1357 agataaagcctggcaagaactcaatgcatttcttcgtaaaaatccaactcaagggggtag 1416

                                                                        
Query: 1417 gagaataaaatcaaccgattatccagctttaagcgacctttttcccaaaggtattccttt 1476
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1417 gagaataaaatcaaccgattatccagctttaagcgacctttttcccaaaggtattccttt 1476

                                                                        
Query: 1477 tgaaaaaaggtagtttcaactccattgatatacaaagaacgaccacatttcgtatttttn 1536
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 1477 tgaaaaaaggtagtttcaactccattgatatacaaagaacgaccacatttcgtattttta 1536

                                                                   
Query: 1537 nnnnnngcaaaactttcatcaaatagcaacaacaaagaaaatataatcaactttc 1591
                  |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1537 aaaaaagcaaaactttcatcaaatagcaacaacaaagaaaatataatcaactttc 1591


 Score =  708 bits (357), Expect = 0.0
 Identities = 371/378 (98%)
 Strand = Plus / Plus

                                                                       
Query: 1   aaaaaaggttactcacaaagttaaagaaatcaatgaaagatttaccaccctataaattat 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   aaaaaaggttactcacaaagttaaagaaatcaatgaaagatttaccaccctataaattat 60

                                                                       
Query: 61  tggatcatcctttctttgattcattaaaagtttgtccaaatgattgtttacctttaaatt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  tggatcatcctttctttgattcattaaaagtttgtccaaatgattgtttacctttaaatt 120

                                                                       
Query: 121 caattagaatttcaaccaatggtatagttcctaaagaattcccaaaacctctatcaccta 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 caattagaatttcaaccaatggtatagttcctaaagaattcccaaaacctctatcaccta 180

                                                                       
Query: 181 tttttgaaaagaataatataataagtataccatcatcaccaatatcaactaccactacta 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tttttgaaaagaataatataataagtataccatcatcaccaatatcaactaccactacta 240

                                                                       
Query: 241 ctttccccaccacacccacaataaagtcaacaacgnnnnnnntatcgaaaacaatagtga 300
           |||||||||||||||||||||||||||||||||||       ||||||||||||||||||
Sbjct: 241 ctttccccaccacacccacaataaagtcaacaacgaaaaaaatatcgaaaacaatagtga 300

                                                                       
Query: 301 taccatcttcaccaagtttagctttaccaccaaatttaagtgttaaatctccatttgcac 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 taccatcttcaccaagtttagctttaccaccaaatttaagtgttaaatctccatttgcac 360

                             
Query: 361 caccaagtaaaaaacaat 378
           ||||||||||||||||||
Sbjct: 361 caccaagtaaaaaacaat 378


 Score =  563 bits (284), Expect = e-160
 Identities = 287/287 (100%)
 Strand = Plus / Plus

                                                                        
Query: 1677 agattcatacaatgaaaaaggaaatgcaacttcttattgcaatggcgatgatgatgacga 1736
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1677 agattcatacaatgaaaaaggaaatgcaacttcttattgcaatggcgatgatgatgacga 1736

                                                                        
Query: 1737 tgactttaaaattgatcacaaagagaacgtagttagtggttttttaatagaaaaagatca 1796
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1737 tgactttaaaattgatcacaaagagaacgtagttagtggttttttaatagaaaaagatca 1796

                                                                        
Query: 1797 tgagtttattggtgataaagaaaatagtaaagagaagcaaaaggtctctaaacgagttca 1856
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1797 tgagtttattggtgataaagaaaatagtaaagagaagcaaaaggtctctaaacgagttca 1856

                                                                        
Query: 1857 agataaagcctggcaagaactcaatgcatttcttcgtaaaaatccaactcaagggggtag 1916
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1857 agataaagcctggcaagaactcaatgcatttcttcgtaaaaatccaactcaagggggtag 1916

                                                           
Query: 1917 gagaataaaatcaaccgattatccaggcnttaagcgacctttttccc 1963
            |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1917 gagaataaaatcaaccgattatccaggcnttaagcgacctttttccc 1963


 Score =  494 bits (249), Expect = e-139
 Identities = 280/290 (96%), Gaps = 1/290 (0%)
 Strand = Plus / Plus

                                                                        
Query: 1177 agattcatacaatgaaaaaggaaatgcaacttcttattgcaatggcgatgatgatgacga 1236
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1677 agattcatacaatgaaaaaggaaatgcaacttcttattgcaatggcgatgatgatgacga 1736

                                                                        
Query: 1237 tgactttaaaattgatcacaaagagaacggagntagngggtttataatagaaaaagatca 1296
            ||||||||||||||||||||||||||||| || ||| || ||| ||||||||||||||||
Sbjct: 1737 tgactttaaaattgatcacaaagagaacgtagttagtggttttttaatagaaaaagatca 1796

                                                                        
Query: 1297 tgagtttattggtgataaagaaaataggaaagagaagcaaaagggctctaaacgaggtca 1356
            ||||||||||||||||||||||||||| |||||||||||||||| ||||||||||| |||
Sbjct: 1797 tgagtttattggtgataaagaaaatagtaaagagaagcaaaaggtctctaaacgagttca 1856

                                                                        
Query: 1357 agataaagcctggcaagaactcaatgcatttcttcgtaaaaatccaactcaagggggtag 1416
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1857 agataaagcctggcaagaactcaatgcatttcttcgtaaaaatccaactcaagggggtag 1916

                                                              
Query: 1417 gagaataaaatcaaccgattatcca-gctttaagcgacctttttcccaaa 1465
            ||||||||||||||||||||||||| || |||||||||||||||||||||
Sbjct: 1917 gagaataaaatcaaccgattatccaggcnttaagcgacctttttcccaaa 1966


 Score =  488 bits (246), Expect = e-137
 Identities = 277/287 (96%), Gaps = 1/287 (0%)
 Strand = Plus / Plus

                                                                        
Query: 1677 agattcatacaatgaaaaaggaaatgcaacttcttattgcaatggcgatgatgatgacga 1736
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1177 agattcatacaatgaaaaaggaaatgcaacttcttattgcaatggcgatgatgatgacga 1236

                                                                        
Query: 1737 tgactttaaaattgatcacaaagagaacgtagttagtggttttttaatagaaaaagatca 1796
            ||||||||||||||||||||||||||||| || ||| || ||| ||||||||||||||||
Sbjct: 1237 tgactttaaaattgatcacaaagagaacggagntagngggtttataatagaaaaagatca 1296

                                                                        
Query: 1797 tgagtttattggtgataaagaaaatagtaaagagaagcaaaaggtctctaaacgagttca 1856
            ||||||||||||||||||||||||||| |||||||||||||||| ||||||||||| |||
Sbjct: 1297 tgagtttattggtgataaagaaaataggaaagagaagcaaaagggctctaaacgaggtca 1356

                                                                        
Query: 1857 agataaagcctggcaagaactcaatgcatttcttcgtaaaaatccaactcaagggggtag 1916
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1357 agataaagcctggcaagaactcaatgcatttcttcgtaaaaatccaactcaagggggtag 1416

                                                           
Query: 1917 gagaataaaatcaaccgattatccaggcnttaagcgacctttttccc 1963
            ||||||||||||||||||||||||| || ||||||||||||||||||
Sbjct: 1417 gagaataaaatcaaccgattatcca-gctttaagcgacctttttccc 1462


 Score =  214 bits (108), Expect = 4e-55
 Identities = 122/129 (94%)
 Strand = Plus / Plus

                                                                        
Query: 1463 aaaggtattccttttgaaaaaaggtagtttcaactccattgatatacaaagaacgaccac 1522
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 963  aaaggtattccttttgaaaaaaggtagtttcaactccattgatatacaaagaacgaccac 1022

                                                                        
Query: 1523 atttcgtatttttnnnnnnngcaaaactttcatcaaatagcaacaacaaagaaaatataa 1582
            |||||||||||||       ||||||||||||||||||||||||||||||||||||||||
Sbjct: 1023 atttcgtatttttaaaaaaagcaaaactttcatcaaatagcaacaacaaagaaaatataa 1082

                     
Query: 1583 tcaactttc 1591
            |||||||||
Sbjct: 1083 tcaactttc 1091


 Score =  214 bits (108), Expect = 4e-55
 Identities = 122/129 (94%)
 Strand = Plus / Plus

                                                                        
Query: 963  aaaggtattccttttgaaaaaaggtagtttcaactccattgatatacaaagaacgaccac 1022
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1463 aaaggtattccttttgaaaaaaggtagtttcaactccattgatatacaaagaacgaccac 1522

                                                                        
Query: 1023 atttcgtatttttnnnnnnngcaaaactttcatcaaatagcaacaacaaagaaaatataa 1082
            |||||||||||||       ||||||||||||||||||||||||||||||||||||||||
Sbjct: 1523 atttcgtatttttaaaaaaagcaaaactttcatcaaatagcaacaacaaagaaaatataa 1582

                     
Query: 1083 tcaactttc 1091
            |||||||||
Sbjct: 1583 tcaactttc 1591


 Score = 46.1 bits (23), Expect = 2e-04
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 415 tatcaatgtttaaatatgatgat 437
           |||||||||||||||||||||||
Sbjct: 415 tatcaatgtttaaatatgatgat 437


>Contig-U15745-1 (Contig-U15745-1Q) /CSM_Contig/Contig-U15745-1Q.Seq.d
          Length = 3192

 Score = 40.1 bits (20), Expect = 0.013
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 1218 atggcgatgatgatgacgatgactttaa 1245
            |||||||||||||||| ||||| |||||
Sbjct: 328  atggcgatgatgatgatgatgaatttaa 301


 Score = 40.1 bits (20), Expect = 0.013
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 1718 atggcgatgatgatgacgatgactttaa 1745
            |||||||||||||||| ||||| |||||
Sbjct: 328  atggcgatgatgatgatgatgaatttaa 301


>Contig-U10911-1 (Contig-U10911-1Q) /CSM_Contig/Contig-U10911-1Q.Seq.d
          Length = 2463

 Score = 40.1 bits (20), Expect = 0.013
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 799  ataaaaacaatcaccaaaaa 818
            ||||||||||||||||||||
Sbjct: 2012 ataaaaacaatcaccaaaaa 1993


  Database: CSM
    Posted date:  Jun 21, 2004  1:35 PM
  Number of letters in database: 8,075,542
  Number of sequences in database:  8402
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 39,975
Number of Sequences: 8402
Number of extensions: 39975
Number of successful extensions: 5846
Number of sequences better than 10.0: 178
length of query: 1987
length of database: 8,075,542
effective HSP length: 17
effective length of query: 1970
effective length of database: 7,932,708
effective search space: 15627434760
effective search space used: 15627434760
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 16 (32.2 bits)
dna update 2009. 1.11
Homology vs DNA 
Query= Contig-U15058-1 (Contig-U15058-1Q) /CSM_Contig/Contig-U15058-1Q.Seq.d
         (1987 letters)

Database: ddbj_A
           92,845,959 sequences; 95,242,211,685 total letters

Searching..................................................done

                                                             Score    E
Sequences producing significant alignments:                  (bits) Value  N

(BJ359319) Dictyostelium discoideum cDNA clone:ddc13j23, 5' ...   488   0.0    4
(BJ391393) Dictyostelium discoideum cDNA clone:dds13k16, 5' ...   545   0.0    3
(BJ400529) Dictyostelium discoideum cDNA clone:dds13k16, 3' ...   527   e-147  2
(EI678761) SB_BBd18-H22.R SB_BBd Sorghum bicolor genomic 3',...    42   0.001  2
(EY378032) CAXA17043.rev CAXA Helobdella robusta Subtracted ...    46   0.003  2
(EY369466) CAXA12377.rev CAXA Helobdella robusta Subtracted ...    46   0.003  2
(EY389176) CAXA7706.fwd CAXA Helobdella robusta Subtracted L...    46   0.003  2
(EY389813) CAXA8049.rev CAXA Helobdella robusta Subtracted L...    46   0.011  2
(AM426827) Vitis vinifera contig VV78X114662.2, whole genome...    42   0.016  2
(BG937119) jh_22703.z1 Penaeus chinensis' cephalothorax cDNA...    44   0.018  2
(DV670546) Ss_Rev_10E09_T3 Reverse subtracted library from f...    36   0.023  3
(EG783608) EST_ssal_evd_40032 ssalevd thymus Salmo salar cDN...    36   0.033  3
(EG854237) EST_ssal_eve_15006 ssaleve thyroid Salmo salar cD...    36   0.033  3
(DV200033) 14537 EMB Oncorhynchus mykiss cDNA clone 115RT_00...    36   0.034  3
(EG774466) EST_ssal_evd_49804 ssalevd thymus Salmo salar cDN...    36   0.035  3
(CT845492) Oryza sativa Indica Group EST sequence:CONTIG7020.      42   0.035  2
(EY342856) CAWZ12151.rev CAWZ Helobdella robusta Primary Lat...    44   0.038  2
(EY342857) CAWZ12151.fwd CAWZ Helobdella robusta Primary Lat...    44   0.041  2
(EG814641) EST_ssal_evd_34498 ssalevd thymus Salmo salar cDN...    36   0.042  3
(EY343949) CAWZ12796.fwd CAWZ Helobdella robusta Primary Lat...    36   0.042  3
(CU353997) Aphanomyces euteiches cDNA.                             38   0.11   2
(EG355549) Ss_Pitu_26F01_M13 Pituitary SSH library Salmo sal...    40   0.12   2
(EG841612) EST_ssal_eve_4344 ssaleve thyroid Salmo salar cDN...    36   0.12   3
(EY361786) CAWZ7908.rev CAWZ Helobdella robusta Primary Late...    40   0.12   2
(EY388895) CAXA7550.rev CAXA Helobdella robusta Subtracted L...    36   0.13   3
(ES325569) Ss_Rev2_18F03_T3 Reverse subtracted library from ...    36   0.14   3
(ET072615) QM0AAA7AG09RM1 CCL1 Citrus clementina genomic clo...    38   0.14   2
(DT080780) AGENCOURT_55703388 NIH_ZGC_21 Danio rerio cDNA cl...    40   0.16   2
(DW631672) CLJ358-O03.y1d-s SHGC-CLJ2 Gasterosteus aculeatus...    38   0.17   2
(DW034216) CFW253-C01.y1d-s SHGC-CFW2 Gasterosteus aculeatus...    38   0.17   2
(DW648572) CLJ384-B08.y1d-s SHGC-CLJ2 Gasterosteus aculeatus...    38   0.18   2
(DW631671) CLJ358-O03.x1d-t SHGC-CLJ2 Gasterosteus aculeatus...    38   0.18   2
(DW613494) CLJ275-C02.x1d-t SHGC-CLJ2 Gasterosteus aculeatus...    38   0.18   2
(DW637417) CLJ367-H10.y1d-s SHGC-CLJ2 Gasterosteus aculeatus...    38   0.18   2
(DW642057) CLJ374-F03.y1d-s SHGC-CLJ2 Gasterosteus aculeatus...    38   0.18   2
(DW637411) CLJ367-H07.y1d-s SHGC-CLJ2 Gasterosteus aculeatus...    38   0.18   2
(DW651765) CLJ388-N09.y1d-s SHGC-CLJ2 Gasterosteus aculeatus...    38   0.19   2
(DW616103) CLJ290-F01.y1d-s SHGC-CLJ2 Gasterosteus aculeatus...    38   0.19   2
(DW627960) CLJ353-G02.y1d-s SHGC-CLJ2 Gasterosteus aculeatus...    38   0.19   2
(DW037482) CFW272-D11.y1d-s SHGC-CFW2 Gasterosteus aculeatus...    38   0.19   2
(DW652367) CLJ389-L15.y1d-s SHGC-CLJ2 Gasterosteus aculeatus...    38   0.19   2
(DW634541) CLJ363-C10.y1d-s SHGC-CLJ2 Gasterosteus aculeatus...    38   0.19   2
(DW648227) CLJ383-J05.y1d-s SHGC-CLJ2 Gasterosteus aculeatus...    38   0.19   2
(DN659845) CEC43-C12.y1d-s SHGC-CEC Gasterosteus aculeatus c...    38   0.20   2
(DW618615) CLJ305-E08.x1d-t SHGC-CLJ2 Gasterosteus aculeatus...    38   0.20   2
(DW026815) CFW235-H06.y1d-s SHGC-CFW2 Gasterosteus aculeatus...    38   0.20   2
(DW616061) CLJ290-D02.y1d-s SHGC-CLJ2 Gasterosteus aculeatus...    38   0.20   2
(DW619897) CLJ313-C11.x1d-t SHGC-CLJ2 Gasterosteus aculeatus...    38   0.20   2
(DW031375) CFW211-A07.y1d-s SHGC-CFW2 Gasterosteus aculeatus...    38   0.20   2
(DW654926) CLJ393-I12.y1d-s SHGC-CLJ2 Gasterosteus aculeatus...    38   0.20   2
(DN663515) CFW14-C10.y1d-s SHGC-CFW Gasterosteus aculeatus c...    38   0.21   2
(DW634540) CLJ363-C10.x1d-t SHGC-CLJ2 Gasterosteus aculeatus...    38   0.21   2
(DW041542) CFW296-E11.y1d-s SHGC-CFW2 Gasterosteus aculeatus...    38   0.21   2
(DT972370) CLJ140-B11.y1d-s SHGC-CLJ Gasterosteus aculeatus ...    38   0.21   2
(DW037481) CFW272-D11.x1d-t SHGC-CFW2 Gasterosteus aculeatus...    38   0.21   2
(DW613495) CLJ275-C02.y1d-s SHGC-CLJ2 Gasterosteus aculeatus...    38   0.21   2
(DW615355) CLJ286-B04.y1d-s SHGC-CLJ2 Gasterosteus aculeatus...    38   0.21   2
(DW615354) CLJ286-B04.x1d-t SHGC-CLJ2 Gasterosteus aculeatus...    38   0.21   2
(DW618616) CLJ305-E08.y1d-s SHGC-CLJ2 Gasterosteus aculeatus...    38   0.22   2
(DW613525) CLJ275-D07.y1d-s SHGC-CLJ2 Gasterosteus aculeatus...    38   0.22   2
(DN661447) CFW02-G09.y1d-s SHGC-CFW Gasterosteus aculeatus c...    38   0.22   2
(DN724485) CNB19-D12.y1d-s SHGC-CNB Gasterosteus aculeatus c...    38   0.22   2
(DN672358) CFW68-A12.y1d-s SHGC-CFW Gasterosteus aculeatus c...    38   0.22   2
(DN667882) CFW40-F08.x1d-t SHGC-CFW Gasterosteus aculeatus c...    38   0.22   2
(DN696645) CLJ08-B12.y1d-s SHGC-CLJ Gasterosteus aculeatus c...    38   0.22   2
(DN698060) CLJ15-D06.y1d-s SHGC-CLJ Gasterosteus aculeatus c...    38   0.22   2
(DN655133) CEC15-C02.y1d-s SHGC-CEC Gasterosteus aculeatus c...    38   0.22   2
(DT983727) CLJ208-F08.x1d-t SHGC-CLJ Gasterosteus aculeatus ...    38   0.22   2
(DN657884) CEC31-D08.y1d-s SHGC-CEC Gasterosteus aculeatus c...    38   0.23   2
(DT984862) CLJ215-G10.y1d-s SHGC-CLJ Gasterosteus aculeatus ...    38   0.23   2
(DN655164) CEC15-D07.y1d-s SHGC-CEC Gasterosteus aculeatus c...    38   0.23   2
(DT983728) CLJ208-F08.y1d-s SHGC-CLJ Gasterosteus aculeatus ...    38   0.23   2
(DN712709) CNB03-H10.y1d-s SHGC-CNB Gasterosteus aculeatus c...    38   0.23   2
(DN654079) CEC09-B04.y1d-s SHGC-CEC Gasterosteus aculeatus c...    38   0.24   2
(DN731963) CNB61-F07.x1d-t SHGC-CNB Gasterosteus aculeatus c...    38   0.24   2
(DT983826) CLJ209-D01.y1d-s SHGC-CLJ Gasterosteus aculeatus ...    38   0.24   2
(DN654078) CEC09-B04.x1d-t SHGC-CEC Gasterosteus aculeatus c...    38   0.24   2
(DT966822) CLJ107-B04.y1d-s SHGC-CLJ Gasterosteus aculeatus ...    38   0.24   2
(DT968532) CLJ117-B04.y1d-s SHGC-CLJ Gasterosteus aculeatus ...    38   0.24   2
(AC116984) Dictyostelium discoideum chromosome 2 map 2567470...    34   0.24   15
(DT984861) CLJ215-G10.x1d-t SHGC-CLJ Gasterosteus aculeatus ...    38   0.24   2
(DT982578) CLJ201-D03.x1d-t SHGC-CLJ Gasterosteus aculeatus ...    38   0.25   2
(DT985331) CLJ218-F06.y1d-s SHGC-CLJ Gasterosteus aculeatus ...    38   0.25   2
(DT950151) CFW107-G01.y1d-s SHGC-CFW Gasterosteus aculeatus ...    38   0.25   2
(DN669618) CFW51-F05.x1d-t SHGC-CFW Gasterosteus aculeatus c...    38   0.25   2
(DT985330) CLJ218-F06.x1d-t SHGC-CLJ Gasterosteus aculeatus ...    38   0.25   2
(DT952216) CFW119-H08.y1d-s SHGC-CFW Gasterosteus aculeatus ...    38   0.25   2
(DN709384) CLJ83-A01.y1d-s SHGC-CLJ Gasterosteus aculeatus c...    38   0.25   2
(DD035230) Full length cDNA.                                       36   0.25   3
(CQ842313) Sequence 960 from Patent EP1440981.                     36   0.25   3
(AK125293) Homo sapiens cDNA FLJ43303 fis, clone NOVAR200013...    36   0.25   3
(DT982786) CLJ202-E10.y1d-s SHGC-CLJ Gasterosteus aculeatus ...    38   0.26   2
(DN687221) CGX51-F05.y1d-s SHGC-CGX Gasterosteus aculeatus c...    38   0.26   2
(DT970118) CLJ126-F04.y1d-s SHGC-CLJ Gasterosteus aculeatus ...    38   0.26   2
(DN700086) CLJ27-E02.y1d-s SHGC-CLJ Gasterosteus aculeatus c...    38   0.26   2
(DN697089) CLJ10-G06.y1d-s SHGC-CLJ Gasterosteus aculeatus c...    38   0.27   2
(DN662613) CFW10-A06.y1d-s SHGC-CFW Gasterosteus aculeatus c...    38   0.27   2
(DN697088) CLJ10-G06.x1d-t SHGC-CLJ Gasterosteus aculeatus c...    38   0.27   2
(DN673916) CFW77-C02.y1d-s SHGC-CFW Gasterosteus aculeatus c...    38   0.27   2
(DN712708) CNB03-H10.x1d-t SHGC-CNB Gasterosteus aculeatus c...    38   0.27   2

>(BJ359319) Dictyostelium discoideum cDNA clone:ddc13j23, 5' end,
           single read.
          Length = 628

 Score =  488 bits (246), Expect(4) = 0.0
 Identities = 246/246 (100%)
 Strand = Plus / Plus


Query: 739 atgatgctgataacatttcacctcctttgcctcatgcaataaagaaaagtatttacaata 798
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 atgatgctgataacatttcacctcctttgcctcatgcaataaagaaaagtatttacaata 381


Query: 799 ataaaaacaatcaccaaaaaatttcaactaatacaatcattaaaactccaattaaagctc 858
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 ataaaaacaatcaccaaaaaatttcaactaatacaatcattaaaactccaattaaagctc 441


Query: 859 caattaaaacaataactcaaataccaaccgagacaccaaataaaataccaaataaaacaa 918
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 caattaaaacaataactcaaataccaaccgagacaccaaataaaataccaaataaaacaa 501


Query: 919 tctctcaatcaaatccggtgatcataagagatgaaacacctcaaaaaggtattccttttg 978
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 502 tctctcaatcaaatccggtgatcataagagatgaaacacctcaaaaaggtattccttttg 561


Query: 979 aaaaaa 984
           ||||||
Sbjct: 562 aaaaaa 567

 Score =  230 bits (116), Expect(4) = 0.0
 Identities = 116/116 (100%)
 Strand = Plus / Plus


Query: 554 gacaccaaagccatatatatttattcatcatttctcaccaaattcacttgggcctctatc 613
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 137 gacaccaaagccatatatatttattcatcatttctcaccaaattcacttgggcctctatc 196


Query: 614 gccaccctcatcaacatcttccacactgcttggagcattatcacaagaaaagtttg 669
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 197 gccaccctcatcaacatcttccacactgcttggagcattatcacaagaaaagtttg 252

 Score =  113 bits (57), Expect(4) = 0.0
 Identities = 57/57 (100%)
 Strand = Plus / Plus


Query: 979  aaaaaaggtagtttcaactccattgatatacaaagaacgaccacatttcgtattttt 1035
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 563  aaaaaaggtagtttcaactccattgatatacaaagaacgaccacatttcgtattttt 619

 Score = 32.2 bits (16), Expect(4) = 0.0
 Identities = 16/16 (100%)
 Strand = Plus / Plus


Query: 422 gtttaaatatgatgat 437
           ||||||||||||||||
Sbjct: 5   gtttaaatatgatgat 20

 Score =  113 bits (57), Expect(2) = 1e-27
 Identities = 57/57 (100%)
 Strand = Plus / Plus


Query: 1479 aaaaaaggtagtttcaactccattgatatacaaagaacgaccacatttcgtattttt 1535
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 563  aaaaaaggtagtttcaactccattgatatacaaagaacgaccacatttcgtattttt 619

 Score = 44.1 bits (22), Expect(2) = 1e-27
 Identities = 22/22 (100%)
 Strand = Plus / Plus


Query: 1463 aaaggtattccttttgaaaaaa 1484
            ||||||||||||||||||||||
Sbjct: 546  aaaggtattccttttgaaaaaa 567

Lambda     K      H
    1.37    0.711     1.31

Matrix: blastn matrix:1 -3
Number of Sequences: 92845959
Number of Hits to DB: 1,874,467,627
Number of extensions: 117376634
Number of successful extensions: 10634175
Number of sequences better than 10.0: 1405
Length of query: 1987
Length of database: 95,242,211,685
Length adjustment: 24
Effective length of query: 1963
Effective length of database: 97,308,875,965
Effective search space: 191017323519295
Effective search space used: 191017323519295
X1: 11 (21.8 bits)
S2: 23 (46.1 bits)
protein update 2009. 7.14
Homology vs Protein 
Query= Contig-U15058-1 (Contig-U15058-1Q) /CSM_Contig/Contig-U15058-1Q.Seq.d
         (1987 letters)

Database: nrp_B
           3,236,559 sequences; 1,051,180,864 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

(Q54LU8) RecName: Full=Probable serine/threonine-protein kinase ...   349   e-146

>(Q54LU8) RecName: Full=Probable serine/threonine-protein kinase
            DDB_G0286465;          EC=2.7.11.1;
          Length = 1221

 Score =  349 bits (896), Expect(2) = e-146
 Identities = 193/328 (58%), Positives = 194/328 (59%)
 Frame = +3

Query: 3    KRLLTKLKKSMKDLPPYKLLDHPFFDSLKVCPNDCLPLNSIRISTNGIVPKEFPKPLSPI 182
            KRLLTKLKKSMKDLPPYKLLDHPFFDSLKVCPNDCLPLNSIRISTNGIVPKEFPKPLSPI
Sbjct: 603  KRLLTKLKKSMKDLPPYKLLDHPFFDSLKVCPNDCLPLNSIRISTNGIVPKEFPKPLSPI 662

Query: 183  FEKNNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVKSPFAP 362
            FEKNN                                                VKSPFAP
Sbjct: 663  FEKNNIISIPSSPISTTTTTFPTTPTIKSTTKKISKTIVIPSSPSLALPPNLSVKSPFAP 722

Query: 363  PSXXXXXXXXXXXXXXTISMFKYDDXXXXXXXXXXXXXXXXXXXXXXXXXXXXNIPKEKL 542
            PS              TISMFKYDD                            NIPKEKL
Sbjct: 723  PSKKQLQQYQQQQKQQTISMFKYDDEEEKEEEEKEKEKEKEKEKEKEEEGEEGNIPKEKL 782

Query: 543  ILKMTPKPYIFIHHFXXXXXXXXXXXXXXXXXXXXXXXQEKFEKKQRQIQDSEKVNKNEE 722
            ILKMTPKPYIFIHHF                       QEKFEKKQRQIQDSEKVNKNEE
Sbjct: 783  ILKMTPKPYIFIHHFSPNSLGPLSPPSSTSSTLLGALSQEKFEKKQRQIQDSEKVNKNEE 842

Query: 723  ENQTKDDADNISPPLPHAIKKSIYNNKNNHQKISXXXXXXXXXXXXXXXXXXXXXETPNK 902
            ENQTKDDADNISPPLPHAIKKSIYNNKNNHQKIS                     ETPNK
Sbjct: 843  ENQTKDDADNISPPLPHAIKKSIYNNKNNHQKISTNTIIKTPIKAPIKTITQIPTETPNK 902

Query: 903  IPNKTISQSNPVIIRDETPQKGIPFEKR 986
            IPNKTISQSNPVIIRDETPQKGIPFEK+
Sbjct: 903  IPNKTISQSNPVIIRDETPQKGIPFEKK 930

 Score =  194 bits (492), Expect(2) = e-146
 Identities = 104/168 (61%), Positives = 105/168 (62%)
 Frame = +2

Query: 962  KRYSF*KKVVSTPLIYKERPHFVFXXXXXXXXXXXXXXXXXXFHXXXXXXXXXXXXXXXX 1141
            K   F KKVVSTPLIYKERPHFVF                  FH
Sbjct: 923  KGIPFEKKVVSTPLIYKERPHFVFLKKAKLSSNSNNKENIINFHNNNNNNNNNNNNNNNN 982

Query: 1142 XXXXXXXXXXXKDSYNEKGNATSYCNGXXXXXXFKIDHKENGXXGFIIEKDHEFIGDKEN 1321
                       KDSYNEKGNATSYCNG      FKIDHKEN   GF+IEKDHEFIGDKEN
Sbjct: 983  NNNNNNNNNNNKDSYNEKGNATSYCNGDDDDDDFKIDHKENVVSGFLIEKDHEFIGDKEN 1042

Query: 1322 RKEKQKGSKRGQDKAWQELNAFLRKNPTQGGRRIKSTDYPALSDLFPK 1465
             KEKQK SKR QDKAWQELNAFLRKNPTQG  RIKSTDYPALSDLFPK
Sbjct: 1043 SKEKQKVSKRVQDKAWQELNAFLRKNPTQGVSRIKSTDYPALSDLFPK 1090

 Score =  197 bits (501), Expect = 1e-48
 Identities = 105/167 (62%), Positives = 107/167 (64%)
 Frame = +1

Query: 1474 F*KKVVSTPLIYKERPHFVFXXXXXXXXXXXXXXXXXXFHXXXXXXXXXXXXXXXXXXXX 1653
            F KKVVSTPLIYKERPHFVF                  FH
Sbjct: 927  FEKKVVSTPLIYKERPHFVFLKKAKLSSNSNNKENIINFHNNNNNNNNNNNNNNNNNNNN 986

Query: 1654 XXXXXXXKDSYNEKGNATSYCNGXXXXXXFKIDHKENVVSGFLIEKDHEFIGDKENSKEK 1833
                   KDSYNEKGNATSYCNG      FKIDHKENVVSGFLIEKDHEFIGDKENSKEK
Sbjct: 987  NNNNNNNKDSYNEKGNATSYCNGDDDDDDFKIDHKENVVSGFLIEKDHEFIGDKENSKEK 1046

Query: 1834 QKVSKRVQDKAWQELNAFLRKNPTQGGRRIKSTDYPGXKRPFSQKKK 1974
            QKVSKRVQDKAWQELNAFLRKNPTQG  RIKSTDYP     F +KK+
Sbjct: 1047 QKVSKRVQDKAWQELNAFLRKNPTQGVSRIKSTDYPALSDLFPKKKR 1093

 Score = 36.6 bits (83), Expect = 3.5
 Identities = 19/34 (55%), Positives = 20/34 (58%)
 Frame = +2

Query: 1886 FFVKIQLKGVGE*NQPIIQALSDLFPKKKRCSEN 1987
            F  K   +GV         ALSDLFPKKKRCSEN
Sbjct: 1064 FLRKNPTQGVSRIKSTDYPALSDLFPKKKRCSEN 1097

Lambda     K      H
   0.318    0.134    0.401

Gapped
Lambda     K      H
   0.267   0.0410    0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3236559
Number of Hits to DB: 2,332,991,560
Number of extensions: 40366768
Number of successful extensions: 114556
Number of sequences better than 10.0: 1
Number of HSP's gapped: 113196
Number of HSP's successfully gapped: 5
Length of query: 662
Length of database: 1,051,180,864
Length adjustment: 135
Effective length of query: 527
Effective length of database: 614,245,399
Effective search space: 323707325273
Effective search space used: 323707325273
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)
PSORT 

 psg: 0.63  gvh: 0.42  alm: 0.44  top: 0.53  tms: 0.00  mit: 0.31  mip: 0.02
 nuc: 0.00  erl: 0.00  erm: 0.40  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 1.00 

	 44.0 %: cytoplasmic
	 36.0 %: nuclear
	 12.0 %: mitochondrial
	  4.0 %: peroxisomal
	  4.0 %: endoplasmic reticulum

>> prediction for Contig-U15058-1 is cyt
VS (DIR, S) 0
VH (FL, L) 0
VF (FL, S) 0
AH (FL, L) 0
AF (FL, S) 0
SL (DIR, L) 0
SS (DIR, S) 0
SH (FL, L) 0
SF (FL, S) 1
CH (FL, L) 0
CF (FL, S) 1
FCL (DIR, L) 0
FC (DIR, S) 0
FC-IC (SUB) 0