Contig-U15051-1 |
Contig ID |
Contig-U15051-1 |
Contig update |
2004. 6.11 |
Contig sequence |
|
Gap |
no gap |
Contig length |
1174 |
Chromosome number (1..6, M) |
2 |
Chromosome length |
8467578 |
Start point |
3657848 |
End point |
3658998 |
Strand (PLUS/MINUS) |
PLUS |
Number of clones |
36 |
Number of EST |
41 |
Link to clone list |
U15051 |
List of clone(s) |
est1=VFI766F,-13,488 est2=VFF651F,-11,520 est3=VFM762E,-3,1042 est4=SFA340F,17,353 est5=CFJ238F,24,643 est6=CFJ245F,24,635 est7=CFJ432E,24,1069 est8=VFH471E,24,1058 est9=CHB614F,27,523 est10=SLE480E,32,1098 est11=CFD505F,34,558 est12=CFF750F,34,503 est13=VFN536F,34,543 est14=CHC825F,36,633 est15=VSG884F,36,477 est16=CFI436F,41,632 est17=SFJ508F,41,704 est18=VSI841F,46,560 est19=SFC662F,56,468 est20=CFF818E,138,1070 est21=CHG709E,138,1068 est22=SFF639E,145,1072 est23=FC-BP18Z,351,960 est24=SLE541Z,397,1087 est25=FC-AG14E,421,634 est26=SFC662Z,543,1124 est27=SLI206Z,607,1155 est28=SFH164Z,635,1127 est29=SLA210Z,657,1174 est30=FC-IC0126F,658,1157 est31=SLF352E,686,1155 est32=SLB474E,739,1091 est33=CFF750Z,746,1131 est34=VFI766Z,747,1131 est35=SSB873Z,776,1165 est36=SFJ508Z,787,1133 est37=SLA504F,825,1114 est38=VFF651Z,830,1133 est39=SLB290E,838,1154 est40=SLI144Z,887,1161 est41=SFA340Z,930,1138
|
Translated Amino Acid sequence |
|
Translated Amino Acid sequence (All Frames) |
|
own update |
2004. 6.23 |
Homology vs CSM-cDNA |
Query= Contig-U15051-1 (Contig-U15051-1Q) /CSM_Contig/Contig-U15051-1Q.Seq.d (1174 letters)
Database: CSM 8402 sequences; 8,075,542 total letters
Score E Sequences producing significant alignments: (bits) Value
Contig-U15051-1 (Contig-U15051-1Q) /CSM_Contig/Conti... 1209 0.0 Contig-U15857-1 (Contig-U15857-1Q) /CSM_Contig/Conti... 178 1e-44 Contig-U16001-1 (Contig-U16001-1Q) /CSM_Contig/Conti... 50 8e-06 Contig-U09968-1 (Contig-U09968-1Q) /CSM_Contig/Conti... 46 1e-04 Contig-U04765-1 (Contig-U04765-1Q) /CSM_Contig/Conti... 46 1e-04 Contig-U16322-1 (Contig-U16322-1Q) /CSM_Contig/Conti... 44 5e-04 Contig-U13852-1 (Contig-U13852-1Q) /CSM_Contig/Conti... 40 0.008 Contig-U12014-1 (Contig-U12014-1Q) /CSM_Contig/Conti... 40 0.008 Contig-U11431-1 (Contig-U11431-1Q) /CSM_Contig/Conti... 40 0.008 Contig-U08185-1 (Contig-U08185-1Q) /CSM_Contig/Conti... 40 0.008
>Contig-U15051-1 (Contig-U15051-1Q) /CSM_Contig/Contig-U15051-1Q.Seq.d Length = 1174
Score = 1209 bits (610), Expect = 0.0 Identities = 610/610 (100%) Strand = Plus / Plus
Query: 474 ggaggtgcaggtatttcattagtaaagaatcaacaaatttcattaactaaagaagatcca 533 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 474 ggaggtgcaggtatttcattagtaaagaatcaacaaatttcattaactaaagaagatcca 533
Query: 534 actcttagaaaattaacaattggtttaggttgggatgtaaacaccacaccaactgcacca 593 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 534 actcttagaaaattaacaattggtttaggttgggatgtaaacaccacaccaactgcacca 593
Query: 594 ttcgatttggatgcagttgttttcatgttgaatgcacaaggtagagttagaacctcacaa 653 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 594 ttcgatttggatgcagttgttttcatgttgaatgcacaaggtagagttagaacctcacaa 653
Query: 654 gatttcattttctacaataacaaggtatcaagagataactctgtttctcatcaaggtgat 713 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 654 gatttcattttctacaataacaaggtatcaagagataactctgtttctcatcaaggtgat 713
Query: 714 aatttaacaggtcaaggtgaaggtgatgatgaagttgtcctcgtaaacttacaagcagtt 773 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 714 aatttaacaggtcaaggtgaaggtgatgatgaagttgtcctcgtaaacttacaagcagtt 773
Query: 774 tcaccagacgtcactcgtttggttttcgctgtcaccattcatttagccgatgaaagaaga 833 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 774 tcaccagacgtcactcgtttggttttcgctgtcaccattcatttagccgatgaaagaaga 833
Query: 834 caaaactttacaatggtaccaagagctttcattcgtgttgccaatcaagaaactggtaga 893 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 834 caaaactttacaatggtaccaagagctttcattcgtgttgccaatcaagaaactggtaga 893
Query: 894 aatatctgtcgttacgatctctctcaagaaggtggtccaaacactgccctcattgctggt 953 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 894 aatatctgtcgttacgatctctctcaagaaggtggtccaaacactgccctcattgctggt 953
Query: 954 gaagtttatcgtgatccatcaaatccaaacaattggtcttttgttgctgttggtaaaggt 1013 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 954 gaagtttatcgtgatccatcaaatccaaacaattggtcttttgttgctgttggtaaaggt 1013
Query: 1014 atgcaaggcgctcttccaggtttactccaaatctttggttgtcaataaatttaatattat 1073 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1014 atgcaaggcgctcttccaggtttactccaaatctttggttgtcaataaatttaatattat 1073
Query: 1074 tatttaattt 1083 |||||||||| Sbjct: 1074 tatttaattt 1083
Score = 785 bits (396), Expect = 0.0 Identities = 396/396 (100%) Strand = Plus / Plus
Query: 61 tgtataacccaccaccaccatctggttcacaaggtaataataattattatagacaaccat 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 tgtataacccaccaccaccatctggttcacaaggtaataataattattatagacaaccat 120
Query: 121 catccacaccgggtgtatcaaacccaaacccacaagctaatcaatttttaccaccacaac 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 catccacaccgggtgtatcaaacccaaacccacaagctaatcaatttttaccaccacaac 180
Query: 181 catctaatactacacaaacaccaggaggctatccaccacaacaacaacaaagaccaccaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 catctaatactacacaaacaccaggaggctatccaccacaacaacaacaaagaccaccaa 240
Query: 241 ctggagcaccacaacaaccaggaggttatccaactccaccaccaccaggagcaccaggag 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 ctggagcaccacaacaaccaggaggttatccaactccaccaccaccaggagcaccaggag 300
Query: 301 gttatccaccacaacaacaaccagccggtcaatatggagcaccaccacaacaacaaccag 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 gttatccaccacaacaacaaccagccggtcaatatggagcaccaccacaacaacaaccag 360
Query: 361 ccggtcaatacggagcaccacaaccagcaggacaatatggtgcaccacaaccagcaggac 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 ccggtcaatacggagcaccacaaccagcaggacaatatggtgcaccacaaccagcaggac 420
Query: 421 aatatggtgcaccacaaccagcaggacaatatggcg 456 |||||||||||||||||||||||||||||||||||| Sbjct: 421 aatatggtgcaccacaaccagcaggacaatatggcg 456
Score = 149 bits (75), Expect = 1e-35 Identities = 119/135 (88%), Gaps = 9/135 (6%) Strand = Plus / Plus
Query: 306 ccaccacaacaacaaccagccggtcaatatggagcaccaccacaacaacaaccagccggt 365 ||||||||||||||||||||||||||||| |||||||||| ||||||| || Sbjct: 342 ccaccacaacaacaaccagccggtcaatacggagcaccac---------aaccagcagga 392
Query: 366 caatacggagcaccacaaccagcaggacaatatggtgcaccacaaccagcaggacaatat 425 ||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 393 caatatggtgcaccacaaccagcaggacaatatggtgcaccacaaccagcaggacaatat 452
Query: 426 ggtgcaccacaacca 440 || ||||||| |||| Sbjct: 453 ggcgcaccaccacca 467
Score = 77.8 bits (39), Expect = 3e-14 Identities = 39/39 (100%) Strand = Plus / Plus
Query: 1110 taaacaaacaataaataactatttgtaatcttagaaatt 1148 ||||||||||||||||||||||||||||||||||||||| Sbjct: 1110 taaacaaacaataaataactatttgtaatcttagaaatt 1148
Score = 34.2 bits (17), Expect = 0.47 Identities = 17/17 (100%) Strand = Plus / Plus
Query: 10 ctattccacatacaaca 26 ||||||||||||||||| Sbjct: 10 ctattccacatacaaca 26
Score = 32.2 bits (16), Expect = 1.9 Identities = 16/16 (100%) Strand = Plus / Plus
Query: 276 ccaccaccaccaggag 291 |||||||||||||||| Sbjct: 462 ccaccaccaccaggag 477
>Contig-U15857-1 (Contig-U15857-1Q) /CSM_Contig/Contig-U15857-1Q.Seq.d Length = 1174
Score = 178 bits (90), Expect = 1e-44 Identities = 255/310 (82%) Strand = Plus / Plus
Query: 701 tcatcaaggtgataatttaacaggtcaaggtgaaggtgatgatgaagttgtcctcgtaaa 760 |||||| |||||||||||||||||| |||||| || || |||||||| || ||||| Sbjct: 666 tcatcatggtgataatttaacaggtgcaggtgatggagacgatgaagtcgtatctgtaaa 725
Query: 761 cttacaagcagtttcaccagacgtcactcgtttggttttcgctgtcaccattcatttagc 820 |||||||||||||||||| ||||| ||||||||||||||||| |||||||||||| | | Sbjct: 726 cttacaagcagtttcacctgacgttactcgtttggttttcgccgtcaccattcatcaacc 785
Query: 821 cgatgaaagaagacaaaactttacaatggtaccaagagctttcattcgtgttgccaatca 880 || |||||||||||| || ||||| |||||||||||||||||| |||| || || Sbjct: 786 tgaattaagaagacaaaatttcggtatggttccaagagctttcattcgtattgcaaacca 845
Query: 881 agaaactggtagaaatatctgtcgttacgatctctctcaagaaggtggtccaaacactgc 940 |||||| ||||||||| ||| | |||||||| | | ||||||||| |||| ||||| Sbjct: 846 agaaacaactagaaatatatgtagatacgatctaaccaatgaaggtggtacaaatactgc 905
Query: 941 cctcattgctggtgaagtttatcgtgatccatcaaatccaaacaattggtcttttgttgc 1000 | |||| ||||||||||||||||||||| |||||| | |||||||| ||| |||| Sbjct: 906 tatgattgttggtgaagtttatcgtgatcctcaaaatcctcaaaattggtcatttattgc 965
Query: 1001 tgttggtaaa 1010 |||||||||| Sbjct: 966 tgttggtaaa 975
Score = 167 bits (84), Expect = 5e-41 Identities = 132/148 (89%) Strand = Plus / Plus
Query: 476 aggtgcaggtatttcattagtaaagaatcaacaaatttcattaactaaagaagatccaac 535 |||| ||||| ||||||||||||| |||||||||||||||||| |||||| |||||| Sbjct: 441 aggtacaggtgtttcattagtaaaagatcaacaaatttcattaagtaaagaggatccata 500
Query: 536 tcttagaaaattaacaattggtttaggttgggatgtaaacaccacaccaactgcaccatt 595 |||||||||||||||| | |||||||||||||||||||| || ||||||| ||||||||| Sbjct: 501 tcttagaaaattaacagtaggtttaggttgggatgtaaatacaacaccaagtgcaccatt 560
Query: 596 cgatttggatgcagttgttttcatgttg 623 |||||||||||||| ||||| |||||| Sbjct: 561 tgatttggatgcagtagtttttatgttg 588
Score = 155 bits (78), Expect = 2e-37 Identities = 118/130 (90%), Gaps = 1/130 (0%) Strand = Plus / Plus
Query: 61 tgtataacccaccaccaccatctggttcacaaggtaataataattattatagacaaccat 120 ||||||| ||||||||||| | |||||||||||||| ||||||||||||||||||| || Sbjct: 171 tgtataatccaccaccacctcccggttcacaaggtaacaataattattatagacaac-at 229
Query: 121 catccacaccgggtgtatcaaacccaaacccacaagctaatcaatttttaccaccacaac 180 |||||||||||||||| || |||||||| |||||||||||||||||||||||||| | || Sbjct: 230 catccacaccgggtgtttctaacccaaatccacaagctaatcaatttttaccacctccac 289
Query: 181 catctaatac 190 | |||||||| Sbjct: 290 cttctaatac 299
Score = 34.2 bits (17), Expect = 0.47 Identities = 20/21 (95%) Strand = Plus / Plus
Query: 408 caaccagcaggacaatatggt 428 |||| |||||||||||||||| Sbjct: 391 caacaagcaggacaatatggt 411
Score = 34.2 bits (17), Expect = 0.47 Identities = 20/21 (95%) Strand = Plus / Plus
Query: 381 caaccagcaggacaatatggt 401 |||| |||||||||||||||| Sbjct: 391 caacaagcaggacaatatggt 411
Score = 34.2 bits (17), Expect = 0.47 Identities = 20/21 (95%) Strand = Plus / Plus
Query: 69 ccaccaccaccatctggttca 89 |||||||||||||| |||||| Sbjct: 415 ccaccaccaccatcaggttca 435
Score = 32.2 bits (16), Expect = 1.9 Identities = 16/16 (100%) Strand = Plus / Plus
Query: 340 caccaccacaacaaca 355 |||||||||||||||| Sbjct: 374 caccaccacaacaaca 389
Score = 32.2 bits (16), Expect = 1.9 Identities = 19/20 (95%) Strand = Plus / Plus
Query: 435 caaccagcaggacaatatgg 454 |||| ||||||||||||||| Sbjct: 391 caacaagcaggacaatatgg 410
>Contig-U16001-1 (Contig-U16001-1Q) /CSM_Contig/Contig-U16001-1Q.Seq.d Length = 1230
Score = 50.1 bits (25), Expect = 8e-06 Identities = 28/29 (96%) Strand = Plus / Plus
Query: 293 accaggaggttatccaccacaacaacaac 321 |||||||| |||||||||||||||||||| Sbjct: 868 accaggagcttatccaccacaacaacaac 896
Score = 46.1 bits (23), Expect = 1e-04 Identities = 29/31 (93%) Strand = Plus / Plus
Query: 200 accaggaggctatccaccacaacaacaacaa 230 |||||||| ||||||||||||||||||||| Sbjct: 868 accaggagcttatccaccacaacaacaacaa 898
Score = 36.2 bits (18), Expect = 0.12 Identities = 18/18 (100%) Strand = Plus / Plus
Query: 303 tatccaccacaacaacaa 320 |||||||||||||||||| Sbjct: 581 tatccaccacaacaacaa 598
Score = 36.2 bits (18), Expect = 0.12 Identities = 18/18 (100%) Strand = Plus / Plus
Query: 210 tatccaccacaacaacaa 227 |||||||||||||||||| Sbjct: 581 tatccaccacaacaacaa 598
Score = 36.2 bits (18), Expect = 0.12 Identities = 21/22 (95%) Strand = Plus / Plus
Query: 293 accaggaggttatccaccacaa 314 |||||||| ||||||||||||| Sbjct: 841 accaggagcttatccaccacaa 862
Score = 34.2 bits (17), Expect = 0.47 Identities = 23/25 (92%) Strand = Plus / Plus
Query: 200 accaggaggctatccaccacaacaa 224 |||||| | |||||||||||||||| Sbjct: 661 accaggtgcctatccaccacaacaa 685
Score = 32.2 bits (16), Expect = 1.9 Identities = 16/16 (100%) Strand = Plus / Plus
Query: 247 caccacaacaaccagg 262 |||||||||||||||| Sbjct: 489 caccacaacaaccagg 504
Score = 32.2 bits (16), Expect = 1.9 Identities = 16/16 (100%) Strand = Plus / Plus
Query: 303 tatccaccacaacaac 318 |||||||||||||||| Sbjct: 455 tatccaccacaacaac 470
Score = 32.2 bits (16), Expect = 1.9 Identities = 16/16 (100%) Strand = Plus / Plus
Query: 210 tatccaccacaacaac 225 |||||||||||||||| Sbjct: 605 tatccaccacaacaac 620
Score = 32.2 bits (16), Expect = 1.9 Identities = 16/16 (100%) Strand = Plus / Plus
Query: 247 caccacaacaaccagg 262 |||||||||||||||| Sbjct: 426 caccacaacaaccagg 441
Score = 32.2 bits (16), Expect = 1.9 Identities = 16/16 (100%) Strand = Plus / Plus
Query: 247 caccacaacaaccagg 262 |||||||||||||||| Sbjct: 330 caccacaacaaccagg 345
Score = 32.2 bits (16), Expect = 1.9 Identities = 16/16 (100%) Strand = Plus / Plus
Query: 247 caccacaacaaccagg 262 |||||||||||||||| Sbjct: 396 caccacaacaaccagg 411
Score = 32.2 bits (16), Expect = 1.9 Identities = 16/16 (100%) Strand = Plus / Plus
Query: 303 tatccaccacaacaac 318 |||||||||||||||| Sbjct: 212 tatccaccacaacaac 227
Score = 32.2 bits (16), Expect = 1.9 Identities = 16/16 (100%) Strand = Plus / Plus
Query: 247 caccacaacaaccagg 262 |||||||||||||||| Sbjct: 363 caccacaacaaccagg 378
Score = 32.2 bits (16), Expect = 1.9 Identities = 16/16 (100%) Strand = Plus / Plus
Query: 247 caccacaacaaccagg 262 |||||||||||||||| Sbjct: 306 caccacaacaaccagg 321
Score = 32.2 bits (16), Expect = 1.9 Identities = 16/16 (100%) Strand = Plus / Plus
Query: 247 caccacaacaaccagg 262 |||||||||||||||| Sbjct: 216 caccacaacaaccagg 231
Score = 32.2 bits (16), Expect = 1.9 Identities = 16/16 (100%) Strand = Plus / Plus
Query: 247 caccacaacaaccagg 262 |||||||||||||||| Sbjct: 552 caccacaacaaccagg 567
Score = 32.2 bits (16), Expect = 1.9 Identities = 16/16 (100%) Strand = Plus / Plus
Query: 303 tatccaccacaacaac 318 |||||||||||||||| Sbjct: 548 tatccaccacaacaac 563
Score = 32.2 bits (16), Expect = 1.9 Identities = 16/16 (100%) Strand = Plus / Plus
Query: 247 caccacaacaaccagg 262 |||||||||||||||| Sbjct: 642 caccacaacaaccagg 657
Score = 32.2 bits (16), Expect = 1.9 Identities = 16/16 (100%) Strand = Plus / Plus
Query: 342 ccaccacaacaacaac 357 |||||||||||||||| Sbjct: 881 ccaccacaacaacaac 896
Score = 32.2 bits (16), Expect = 1.9 Identities = 16/16 (100%) Strand = Plus / Plus
Query: 247 caccacaacaaccagg 262 |||||||||||||||| Sbjct: 459 caccacaacaaccagg 474
Score = 32.2 bits (16), Expect = 1.9 Identities = 16/16 (100%) Strand = Plus / Plus
Query: 210 tatccaccacaacaac 225 |||||||||||||||| Sbjct: 212 tatccaccacaacaac 227
Score = 32.2 bits (16), Expect = 1.9 Identities = 16/16 (100%) Strand = Plus / Plus
Query: 210 tatccaccacaacaac 225 |||||||||||||||| Sbjct: 455 tatccaccacaacaac 470
Score = 32.2 bits (16), Expect = 1.9 Identities = 16/16 (100%) Strand = Plus / Plus
Query: 247 caccacaacaaccagg 262 |||||||||||||||| Sbjct: 609 caccacaacaaccagg 624
Score = 32.2 bits (16), Expect = 1.9 Identities = 16/16 (100%) Strand = Plus / Plus
Query: 302 ttatccaccacaacaa 317 |||||||||||||||| Sbjct: 934 ttatccaccacaacaa 949
Score = 32.2 bits (16), Expect = 1.9 Identities = 16/16 (100%) Strand = Plus / Plus
Query: 210 tatccaccacaacaac 225 |||||||||||||||| Sbjct: 548 tatccaccacaacaac 563
Score = 32.2 bits (16), Expect = 1.9 Identities = 16/16 (100%) Strand = Plus / Plus
Query: 303 tatccaccacaacaac 318 |||||||||||||||| Sbjct: 605 tatccaccacaacaac 620
Score = 30.2 bits (15), Expect = 7.3 Identities = 15/15 (100%) Strand = Plus / Plus
Query: 303 tatccaccacaacaa 317 ||||||||||||||| Sbjct: 671 tatccaccacaacaa 685
Score = 30.2 bits (15), Expect = 7.3 Identities = 15/15 (100%) Strand = Plus / Plus
Query: 342 ccaccacaacaacaa 356 ||||||||||||||| Sbjct: 584 ccaccacaacaacaa 598
Score = 30.2 bits (15), Expect = 7.3 Identities = 15/15 (100%) Strand = Plus / Plus
Query: 210 tatccaccacaacaa 224 ||||||||||||||| Sbjct: 935 tatccaccacaacaa 949
Score = 30.2 bits (15), Expect = 7.3 Identities = 15/15 (100%) Strand = Plus / Plus
Query: 303 tatccaccacaacaa 317 ||||||||||||||| Sbjct: 518 tatccaccacaacaa 532
Score = 30.2 bits (15), Expect = 7.3 Identities = 15/15 (100%) Strand = Plus / Plus
Query: 210 tatccaccacaacaa 224 ||||||||||||||| Sbjct: 518 tatccaccacaacaa 532
Database: CSM Posted date: Jun 21, 2004 1:35 PM Number of letters in database: 8,075,542 Number of sequences in database: 8402 Lambda K H 1.37 0.711 1.31
Gapped Lambda K H 1.37 0.711 1.31
Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 54,567 Number of Sequences: 8402 Number of extensions: 54567 Number of successful extensions: 12105 Number of sequences better than 10.0: 667 length of query: 1174 length of database: 8,075,542 effective HSP length: 16 effective length of query: 1158 effective length of database: 7,941,110 effective search space: 9195805380 effective search space used: 9195805380 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 15 (30.2 bits)
|
dna update |
2009. 1.10 |
Homology vs DNA |
Query= Contig-U15051-1 (Contig-U15051-1Q) /CSM_Contig/Contig-U15051-1Q.Seq.d (1174 letters)
Database: ddbj_A 92,845,959 sequences; 95,242,211,685 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value N
(AC116984) Dictyostelium discoideum chromosome 2 map 2567470... 1209 0.0 2 (AU034818) Dictyostelium discoideum slug cDNA, clone SLE541. 1209 0.0 2 (AU035008) Dictyostelium discoideum slug cDNA, clone SLE480. 1185 0.0 2 (X55975) D.discoideum CAPP1 gene for cyclic AMP-binding prot... 1158 0.0 2 (BJ429603) Dictyostelium discoideum cDNA clone:ddv4l06, 3' e... 1140 0.0 2 (BJ372303) Dictyostelium discoideum cDNA clone:ddc12d06, 3' ... 1140 0.0 2 (BJ379479) Dictyostelium discoideum cDNA clone:ddc35b03, 3' ... 1132 0.0 3 (BJ398429) Dictyostelium discoideum cDNA clone:dds12m10, 3' ... 1045 0.0 3 (BJ375647) Dictyostelium discoideum cDNA clone:ddc19p08, 3' ... 1043 0.0 4 (X52688) D.discoideum CABP1 gene for CABP1 cAMP binding prot... 1033 0.0 4 (M36176) D.discoideum cAMP binding protein mRNA. 1033 0.0 4 (AU061506) Dictyostelium discoideum slug cDNA, clone SLE480. 771 0.0 2 (BJ416511) Dictyostelium discoideum cDNA clone:ddv26l15, 5' ... 771 0.0 2 (BJ413473) Dictyostelium discoideum cDNA clone:ddv15n18, 5' ... 771 0.0 2 (BJ389820) Dictyostelium discoideum cDNA clone:dds20o01, 5' ... 771 0.0 2 (BJ361931) Dictyostelium discoideum cDNA clone:ddc19k10, 5' ... 771 0.0 2 (BJ361924) Dictyostelium discoideum cDNA clone:ddc19i12, 5' ... 771 0.0 2 (BJ361476) Dictyostelium discoideum cDNA clone:ddc17h10, 5' ... 771 0.0 2 (BJ363550) Dictyostelium discoideum cDNA clone:ddc27b08, 5' ... 763 0.0 2 (BJ365336) Dictyostelium discoideum cDNA clone:ddc35b03, 5' ... 640 0.0 2 (BJ358944) Dictyostelium discoideum cDNA clone:ddc12d06, 5' ... 632 0.0 2 (BJ387115) Dictyostelium discoideum cDNA clone:dds12m10, 5' ... 555 0.0 3 (AU284915) Dictyostelium discoideum gamete cDNA clone:FC-BP1... 1019 0.0 1 (AU271360) Dictyostelium discoideum gamete cDNA clone:FC-IC0... 747 0.0 2 (AU053239) Dictyostelium discoideum slug cDNA, clone SLI206. 825 0.0 2 (BJ431819) Dictyostelium discoideum cDNA clone:ddv15n18, 3' ... 870 0.0 2 (BJ399592) Dictyostelium discoideum cDNA clone:dds6k16, 3' e... 930 0.0 1 (AU269316) Dictyostelium discoideum vegetative cDNA clone:VS... 771 0.0 2 (BJ360817) Dictyostelium discoideum cDNA clone:ddc8i01, 5' e... 771 0.0 2 (BJ417652) Dictyostelium discoideum cDNA clone:ddv28g09, 5' ... 765 0.0 2 (BJ435284) Dictyostelium discoideum cDNA clone:ddv26l15, 3' ... 878 0.0 1 (C25533) Dictyostelium discoideum slug cDNA, clone SLA210. 852 0.0 1 (BJ361952) Dictyostelium discoideum cDNA clone:ddc19p08, 5' ... 771 0.0 2 (BJ363105) Dictyostelium discoideum cDNA clone:ddc25k04, 5' ... 771 0.0 2 (BJ410437) Dictyostelium discoideum cDNA clone:ddv12e14, 5' ... 771 0.0 2 (BJ409813) Dictyostelium discoideum cDNA clone:ddv10i06, 5' ... 504 0.0 3 (AU052938) Dictyostelium discoideum slug cDNA, clone SLF352. 797 0.0 1 (BJ359036) Dictyostelium discoideum cDNA clone:ddc12d13, 5' ... 389 0.0 3 (BJ414249) Dictyostelium discoideum cDNA clone:ddv18d17, 5' ... 771 0.0 2 (AU266898) Dictyostelium discoideum vegetative cDNA clone:VS... 771 0.0 1 (BJ388656) Dictyostelium discoideum cDNA clone:dds6k16, 5' e... 680 0.0 2 (BJ400983) Dictyostelium discoideum cDNA clone:dds15o15, 3' ... 664 0.0 1 (BJ411375) Dictyostelium discoideum cDNA clone:ddv4l06, 5' e... 504 0.0 3 (AU033815) Dictyostelium discoideum slug cDNA, clone SLB474. 515 e-175 2 (AU036958) Dictyostelium discoideum slug cDNA, clone SSB873. 547 e-155 2 (BJ387301) Dictyostelium discoideum cDNA clone:dds1p09, 5' e... 345 e-144 3 (AU060165) Dictyostelium discoideum slug cDNA, clone SLA504. 521 e-143 1 (M36174) D.discoideum p34 (CABP1-related gene) mRNA, complet... 178 e-138 8 (AU033668) Dictyostelium discoideum slug cDNA, clone SLB290. 488 e-133 1 (AC117081) Dictyostelium discoideum chromosome 2 map 5862124... 170 e-124 9 (BJ372410) Dictyostelium discoideum cDNA clone:ddc12d13, 3' ... 450 e-122 1 (AU053205) Dictyostelium discoideum slug cDNA, clone SLI144. 398 e-106 1 (M36175) D.discoideum p31 (CABP1-related gene) mRNA, complet... 167 e-101 8 (BJ427933) Dictyostelium discoideum cDNA clone:ddv10i06, 3' ... 272 2e-97 4 (BJ373409) Dictyostelium discoideum cDNA clone:ddc3a02, 3' e... 167 2e-88 5 (BJ374998) Dictyostelium discoideum cDNA clone:ddc17f03, 3' ... 167 2e-88 5 (BJ428595) Dictyostelium discoideum cDNA clone:ddv12e14, 3' ... 325 2e-84 1 (BJ401322) Dictyostelium discoideum cDNA clone:dds22j22, 3' ... 129 4e-84 6 (BJ402406) Dictyostelium discoideum cDNA clone:dds16b23, 3' ... 149 3e-83 5 (BJ434880) Dictyostelium discoideum cDNA clone:ddv25b12, 3' ... 165 3e-81 6 (BJ432383) Dictyostelium discoideum cDNA clone:ddv18d17, 3' ... 303 8e-78 1 (BJ402022) Dictyostelium discoideum cDNA clone:dds20o01, 3' ... 287 5e-73 1 (BJ377004) Dictyostelium discoideum cDNA clone:ddc30p23, 3' ... 96 1e-67 5 (BJ376631) Dictyostelium discoideum cDNA clone:ddc29f12, 3' ... 96 3e-65 5 (BJ398659) Dictyostelium discoideum cDNA clone:dds1p09, 3' e... 192 3e-59 2 (AU038216) Dictyostelium discoideum slug cDNA, clone SSH427. 96 8e-50 4 (AU033854) Dictyostelium discoideum slug cDNA, clone SLB524. 96 8e-50 4 (BJ430092) Dictyostelium discoideum cDNA clone:ddv6f05, 3' e... 96 4e-45 4 (BJ399420) Dictyostelium discoideum cDNA clone:dds5m19, 3' e... 96 8e-43 4 (AU039238) Dictyostelium discoideum slug cDNA, clone SLH230. 68 2e-23 3 (C23653) Dictyostelium discoideum gamete cDNA, clone FC-AG14. 121 6e-23 1 (BJ435864) Dictyostelium discoideum cDNA clone:ddv28p18, 3' ... 84 5e-19 2 (AU060094) Dictyostelium discoideum slug cDNA, clone SLA285. 46 1e-16 5 (AC133102) Mus musculus BAC clone RP23-173H19 from 1, comple... 40 1e-10 4 (AC134845) Mus musculus BAC clone RP24-424K5 from chromosome... 40 1e-10 4 (DE217527) Trifolium pratense DNA, clone:RCG08017. 36 1e-10 4 (DE226622) Trifolium pratense DNA, clone:RCG19103. 36 1e-10 4 (AB266194) Plasmodium cynomolgi msp1 gene for merozoite surf... 38 6e-09 3 (AB266193) Plasmodium cynomolgi msp1 gene for merozoite surf... 38 6e-09 3 (AB266188) Plasmodium cynomolgi msp1 gene for merozoite surf... 38 6e-09 3 (AB266196) Plasmodium cynomolgi msp1 gene for merozoite surf... 38 6e-09 3 (BH164149) ENTSP76TR Entamoeba histolytica Sheared DNA Entam... 40 2e-08 3 (BH161173) ENTTB30TR Entamoeba histolytica Sheared DNA Entam... 40 2e-08 3 (AZ545567) ENTEX13TR Entamoeba histolytica Sheared DNA Entam... 40 2e-08 3 (CX085928) EHACC50TR E. histolytica Normalized cDNA library ... 40 2e-08 3 (CX080873) EHAAA31TR E. histolytica Normalized cDNA library ... 40 2e-08 3 (CX082297) EHAAU50TR E. histolytica Normalized cDNA library ... 40 2e-08 3 (CX087744) EHAD541TR E. histolytica Normalized cDNA library ... 40 2e-08 3 (CX098432) EHAHL64TR E. histolytica Normalized cDNA library ... 40 2e-08 3 (CX084800) EHABW24TR E. histolytica Normalized cDNA library ... 40 2e-08 3 (CX087864) EHAD747TR E. histolytica Normalized cDNA library ... 40 2e-08 3 (CX090032) EHAE749TR E. histolytica Normalized cDNA library ... 40 2e-08 3 (CX091144) EHAEO34TR E. histolytica Normalized cDNA library ... 40 2e-08 3 (CX088980) EHADQ62TR E. histolytica Normalized cDNA library ... 40 2e-08 3 (CX096317) EHAGQ28TR E. histolytica Normalized cDNA library ... 40 2e-08 3 (CX080050) EHAA411TR E. histolytica Normalized cDNA library ... 40 2e-08 3 (CX085931) EHACC54TR E. histolytica Normalized cDNA library ... 40 2e-08 3 (CX090191) EHAEA46TR E. histolytica Normalized cDNA library ... 40 2e-08 3 (CX080049) EHAA411TF E. histolytica Normalized cDNA library ... 40 2e-08 3 (CX095238) EHAGA69TR E. histolytica Normalized cDNA library ... 40 2e-08 3
>(AC116984) Dictyostelium discoideum chromosome 2 map 2567470-3108875 strain AX4, complete sequence. Length = 541399
Score = 1209 bits (610), Expect(2) = 0.0 Identities = 610/610 (100%) Strand = Plus / Minus
Query: 474 ggaggtgcaggtatttcattagtaaagaatcaacaaatttcattaactaaagaagatcca 533 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 91018 ggaggtgcaggtatttcattagtaaagaatcaacaaatttcattaactaaagaagatcca 90959
Query: 534 actcttagaaaattaacaattggtttaggttgggatgtaaacaccacaccaactgcacca 593 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 90958 actcttagaaaattaacaattggtttaggttgggatgtaaacaccacaccaactgcacca 90899
Query: 594 ttcgatttggatgcagttgttttcatgttgaatgcacaaggtagagttagaacctcacaa 653 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 90898 ttcgatttggatgcagttgttttcatgttgaatgcacaaggtagagttagaacctcacaa 90839
Query: 654 gatttcattttctacaataacaaggtatcaagagataactctgtttctcatcaaggtgat 713 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 90838 gatttcattttctacaataacaaggtatcaagagataactctgtttctcatcaaggtgat 90779
Query: 714 aatttaacaggtcaaggtgaaggtgatgatgaagttgtcctcgtaaacttacaagcagtt 773 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 90778 aatttaacaggtcaaggtgaaggtgatgatgaagttgtcctcgtaaacttacaagcagtt 90719
Query: 774 tcaccagacgtcactcgtttggttttcgctgtcaccattcatttagccgatgaaagaaga 833 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 90718 tcaccagacgtcactcgtttggttttcgctgtcaccattcatttagccgatgaaagaaga 90659
Query: 834 caaaactttacaatggtaccaagagctttcattcgtgttgccaatcaagaaactggtaga 893 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 90658 caaaactttacaatggtaccaagagctttcattcgtgttgccaatcaagaaactggtaga 90599
Query: 894 aatatctgtcgttacgatctctctcaagaaggtggtccaaacactgccctcattgctggt 953 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 90598 aatatctgtcgttacgatctctctcaagaaggtggtccaaacactgccctcattgctggt 90539
Query: 954 gaagtttatcgtgatccatcaaatccaaacaattggtcttttgttgctgttggtaaaggt 1013 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 90538 gaagtttatcgtgatccatcaaatccaaacaattggtcttttgttgctgttggtaaaggt 90479
Query: 1014 atgcaaggcgctcttccaggtttactccaaatctttggttgtcaataaatttaatattat 1073 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 90478 atgcaaggcgctcttccaggtttactccaaatctttggttgtcaataaatttaatattat 90419
Query: 1074 tatttaattt 1083 |||||||||| Sbjct: 90418 tatttaattt 90409
Score = 771 bits (389), Expect(2) = 0.0 Identities = 389/389 (100%) Strand = Plus / Minus
Query: 68 cccaccaccaccatctggttcacaaggtaataataattattatagacaaccatcatccac 127 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 91424 cccaccaccaccatctggttcacaaggtaataataattattatagacaaccatcatccac 91365
Query: 128 accgggtgtatcaaacccaaacccacaagctaatcaatttttaccaccacaaccatctaa 187 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 91364 accgggtgtatcaaacccaaacccacaagctaatcaatttttaccaccacaaccatctaa 91305
Query: 188 tactacacaaacaccaggaggctatccaccacaacaacaacaaagaccaccaactggagc 247 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 91304 tactacacaaacaccaggaggctatccaccacaacaacaacaaagaccaccaactggagc 91245
Query: 248 accacaacaaccaggaggttatccaactccaccaccaccaggagcaccaggaggttatcc 307 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 91244 accacaacaaccaggaggttatccaactccaccaccaccaggagcaccaggaggttatcc 91185
Query: 308 accacaacaacaaccagccggtcaatatggagcaccaccacaacaacaaccagccggtca 367 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 91184 accacaacaacaaccagccggtcaatatggagcaccaccacaacaacaaccagccggtca 91125
Query: 368 atacggagcaccacaaccagcaggacaatatggtgcaccacaaccagcaggacaatatgg 427 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 91124 atacggagcaccacaaccagcaggacaatatggtgcaccacaaccagcaggacaatatgg 91065
Query: 428 tgcaccacaaccagcaggacaatatggcg 456 ||||||||||||||||||||||||||||| Sbjct: 91064 tgcaccacaaccagcaggacaatatggcg 91036
Score = 127 bits (64), Expect(3) = 2e-44 Identities = 82/88 (93%) Strand = Plus / Minus
Query: 353 acaaccagccggtcaatacggagcaccacaaccagcaggacaatatggtgcaccacaacc 412 ||||||||| || ||||| || |||||||||||||||||||||||||||||||||||||| Sbjct: 91112 acaaccagcaggacaatatggtgcaccacaaccagcaggacaatatggtgcaccacaacc 91053
Query: 413 agcaggacaatatggtgcaccacaacca 440 ||||||||||||||| ||||||| |||| Sbjct: 91052 agcaggacaatatggcgcaccaccacca 91025
Score = 71.9 bits (36), Expect(3) = 2e-44 Identities = 39/40 (97%) Strand = Plus / Minus
Query: 306 ccaccacaacaacaaccagccggtcaatatggagcaccac 345 ||||||||||||||||||||||||||||| |||||||||| Sbjct: 91150 ccaccacaacaacaaccagccggtcaatacggagcaccac 91111
Score = 32.2 bits (16), Expect(3) = 2e-44 Identities = 16/16 (100%) Strand = Plus / Minus
Query: 257 accaggaggttatcca 272 |||||||||||||||| Sbjct: 91199 accaggaggttatcca 91184
Score = 117 bits (59), Expect(10) = 5e-42 Identities = 71/75 (94%) Strand = Plus / Minus
Query: 380 acaaccagcaggacaatatggtgcaccacaaccagcaggacaatatggtgcaccacaacc 439 ||||||||| || ||||| || |||||||||||||||||||||||||||||||||||||| Sbjct: 91139 acaaccagccggtcaatacggagcaccacaaccagcaggacaatatggtgcaccacaacc 91080
Query: 440 agcaggacaatatgg 454 ||||||||||||||| Sbjct: 91079 agcaggacaatatgg 91065
Score = 71.9 bits (36), Expect(10) = 5e-42 Identities = 39/40 (97%) Strand = Plus / Minus
Query: 342 ccaccacaacaacaaccagccggtcaatacggagcaccac 381 ||||||||||||||||||||||||||||| |||||||||| Sbjct: 91186 ccaccacaacaacaaccagccggtcaatatggagcaccac 91147
Score = 52.0 bits (26), Expect(10) = 5e-42 Identities = 29/30 (96%) Strand = Plus / Minus
Query: 292 caccaggaggttatccaccacaacaacaac 321 |||||||||| ||||||||||||||||||| Sbjct: 91293 caccaggaggctatccaccacaacaacaac 91264
Score = 36.2 bits (18), Expect(10) = 5e-42 Identities = 21/22 (95%) Strand = Plus / Minus
Query: 276 ccaccaccaccaggagcaccag 297 ||||||||||||| |||||||| Sbjct: 127963 ccaccaccaccagtagcaccag 127942
Score = 34.2 bits (17), Expect(10) = 5e-42 Identities = 17/17 (100%) Strand = Plus / Minus
Query: 1057 aataaatttaatattat 1073 ||||||||||||||||| Sbjct: 48277 aataaatttaatattat 48261
Score = 32.2 bits (16), Expect(10) = 5e-42 Identities = 16/16 (100%) Strand = Plus / Minus
Query: 215 accacaacaacaacaa 230 |||||||||||||||| Sbjct: 221504 accacaacaacaacaa 221489
Score = 30.2 bits (15), Expect(10) = 5e-42 Identities = 15/15 (100%) Strand = Plus / Minus
Query: 727 aaggtgaaggtgatg 741 ||||||||||||||| Sbjct: 66682 aaggtgaaggtgatg 66668
Score = 30.2 bits (15), Expect(10) = 5e-42 Identities = 15/15 (100%) Strand = Plus / Minus
Query: 69 ccaccaccaccatct 83 ||||||||||||||| Sbjct: 336081 ccaccaccaccatct 336067
Score = 28.2 bits (14), Expect(10) = 5e-42 Identities = 14/14 (100%) Strand = Plus / Minus
Query: 97 ataataattattat 110 |||||||||||||| Sbjct: 285510 ataataattattat 285497
Score = 26.3 bits (13), Expect(10) = 5e-42 Identities = 13/13 (100%) Strand = Plus / Minus
Query: 1068 tattattatttaa 1080 ||||||||||||| Sbjct: 2470 tattattatttaa 2458
Score = 63.9 bits (32), Expect(2) = 7e-11 Identities = 44/48 (91%) Strand = Plus / Minus
Query: 407 acaaccagcaggacaatatggtgcaccacaaccagcaggacaatatgg 454 ||||||||| || ||||| || |||||||||||||||||||||||||| Sbjct: 91139 acaaccagccggtcaatacggagcaccacaaccagcaggacaatatgg 91092
Score = 52.0 bits (26), Expect(2) = 7e-11 Identities = 29/30 (96%) Strand = Plus / Minus
Query: 199 caccaggaggctatccaccacaacaacaac 228 |||||||||| ||||||||||||||||||| Sbjct: 91200 caccaggaggttatccaccacaacaacaac 91171
Score = 73.8 bits (37), Expect(7) = 1e-08 Identities = 55/61 (90%) Strand = Plus / Minus
Query: 353 acaaccagccggtcaatacggagcaccacaaccagcaggacaatatggtgcaccacaacc 412 ||||||||| || ||||| || |||||||||||||||||||||||||| ||||||| ||| Sbjct: 91085 acaaccagcaggacaatatggtgcaccacaaccagcaggacaatatggcgcaccaccacc 91026
Query: 413 a 413 | Sbjct: 91025 a 91025
Score = 36.2 bits (18), Expect(7) = 1e-08 Identities = 18/18 (100%) Strand = Plus / Minus
Query: 213 ccaccacaacaacaacaa 230 |||||||||||||||||| Sbjct: 387584 ccaccacaacaacaacaa 387567
Score = 32.2 bits (16), Expect(7) = 1e-08 Identities = 16/16 (100%) Strand = Plus / Minus
Query: 342 ccaccacaacaacaac 357 |||||||||||||||| Sbjct: 91279 ccaccacaacaacaac 91264
Score = 28.2 bits (14), Expect(7) = 1e-08 Identities = 14/14 (100%) Strand = Plus / Minus
Query: 1064 ttaatattattatt 1077 |||||||||||||| Sbjct: 6868 ttaatattattatt 6855
Score = 28.2 bits (14), Expect(7) = 1e-08 Identities = 14/14 (100%) Strand = Plus / Minus
Query: 572 aaacaccacaccaa 585 |||||||||||||| Sbjct: 32224 aaacaccacaccaa 32211
Score = 28.2 bits (14), Expect(7) = 1e-08 Identities = 14/14 (100%) Strand = Plus / Minus
Query: 308 accacaacaacaac 321 |||||||||||||| Sbjct: 221504 accacaacaacaac 221491
Score = 28.2 bits (14), Expect(7) = 1e-08 Identities = 14/14 (100%) Strand = Plus / Minus
Query: 100 ataattattataga 113 |||||||||||||| Sbjct: 415421 ataattattataga 415408
Score = 36.2 bits (18), Expect(12) = 0.006 Identities = 21/22 (95%) Strand = Plus / Plus
Query: 98 taataattattatagacaacca 119 |||||||||||||| ||||||| Sbjct: 123618 taataattattatacacaacca 123639
Score = 34.2 bits (17), Expect(12) = 0.006 Identities = 20/21 (95%) Strand = Plus / Plus
Query: 731 tgaaggtgatgatgaagttgt 751 |||||||| |||||||||||| Sbjct: 372478 tgaaggtggtgatgaagttgt 372498
Score = 32.2 bits (16), Expect(12) = 0.006 Identities = 16/16 (100%) Strand = Plus / Plus
Query: 306 ccaccacaacaacaac 321 |||||||||||||||| Sbjct: 225878 ccaccacaacaacaac 225893
Score = 32.2 bits (16), Expect(12) = 0.006 Identities = 16/16 (100%) Strand = Plus / Plus
Query: 344 accacaacaacaacca 359 |||||||||||||||| Sbjct: 240305 accacaacaacaacca 240320
Score = 30.2 bits (15), Expect(12) = 0.006 Identities = 15/15 (100%) Strand = Plus / Plus
Query: 655 atttcattttctaca 669 ||||||||||||||| Sbjct: 332436 atttcattttctaca 332450
Score = 30.2 bits (15), Expect(12) = 0.006 Identities = 15/15 (100%) Strand = Plus / Plus
Query: 1063 tttaatattattatt 1077 ||||||||||||||| Sbjct: 386521 tttaatattattatt 386535
Score = 28.2 bits (14), Expect(12) = 0.006 Identities = 14/14 (100%) Strand = Plus / Plus
Query: 91 aaggtaataataat 104 |||||||||||||| Sbjct: 60642 aaggtaataataat 60655
Score = 28.2 bits (14), Expect(12) = 0.006 Identities = 14/14 (100%) Strand = Plus / Plus
Query: 217 cacaacaacaacaa 230 |||||||||||||| Sbjct: 134630 cacaacaacaacaa 134643
Score = 28.2 bits (14), Expect(12) = 0.006 Identities = 14/14 (100%) Strand = Plus / Plus
Query: 247 caccacaacaacca 260 |||||||||||||| Sbjct: 185019 caccacaacaacca 185032
Score = 28.2 bits (14), Expect(12) = 0.006 Identities = 14/14 (100%) Strand = Plus / Plus
Query: 502 atcaacaaatttca 515 |||||||||||||| Sbjct: 255750 atcaacaaatttca 255763
Score = 28.2 bits (14), Expect(12) = 0.006 Identities = 14/14 (100%) Strand = Plus / Plus
Query: 554 tggtttaggttggg 567 |||||||||||||| Sbjct: 300442 tggtttaggttggg 300455
Score = 26.3 bits (13), Expect(12) = 0.006 Identities = 13/13 (100%) Strand = Plus / Plus
Query: 69 ccaccaccaccat 81 ||||||||||||| Sbjct: 21683 ccaccaccaccat 21695
Score = 32.2 bits (16), Expect(2) = 1.4 Identities = 16/16 (100%) Strand = Plus / Plus
Query: 308 accacaacaacaacca 323 |||||||||||||||| Sbjct: 240305 accacaacaacaacca 240320
Score = 32.2 bits (16), Expect(2) = 1.4 Identities = 16/16 (100%) Strand = Plus / Plus
Query: 308 accacaacaacaacca 323 |||||||||||||||| Sbjct: 240317 accacaacaacaacca 240332
Score = 32.2 bits (16), Expect(2) = 1.4 Identities = 16/16 (100%) Strand = Plus / Plus
Query: 344 accacaacaacaacca 359 |||||||||||||||| Sbjct: 240317 accacaacaacaacca 240332
Score = 32.2 bits (16), Expect(2) = 1.4 Identities = 16/16 (100%) Strand = Plus / Plus
Query: 344 accacaacaacaacca 359 |||||||||||||||| Sbjct: 240329 accacaacaacaacca 240344
Score = 36.2 bits (18), Expect(8) = 3.1 Identities = 21/22 (95%) Strand = Plus / Plus
Query: 98 taataattattatagacaacca 119 |||||||||||||| ||||||| Sbjct: 126689 taataattattatacacaacca 126710
Score = 36.2 bits (18), Expect(8) = 3.1 Identities = 18/18 (100%) Strand = Plus / Plus
Query: 340 caccaccacaacaacaac 357 |||||||||||||||||| Sbjct: 225876 caccaccacaacaacaac 225893
Score = 32.2 bits (16), Expect(8) = 3.1 Identities = 16/16 (100%) Strand = Plus / Plus
Query: 215 accacaacaacaacaa 230 |||||||||||||||| Sbjct: 185029 accacaacaacaacaa 185044
Score = 30.2 bits (15), Expect(8) = 3.1 Identities = 15/15 (100%) Strand = Plus / Plus
Query: 1059 taaatttaatattat 1073 ||||||||||||||| Sbjct: 303848 taaatttaatattat 303862
Score = 28.2 bits (14), Expect(8) = 3.1 Identities = 14/14 (100%) Strand = Plus / Plus
Query: 307 caccacaacaacaa 320 |||||||||||||| Sbjct: 225792 caccacaacaacaa 225805
Score = 28.2 bits (14), Expect(8) = 3.1 Identities = 14/14 (100%) Strand = Plus / Plus
Query: 719 aacaggtcaaggtg 732 |||||||||||||| Sbjct: 226810 aacaggtcaaggtg 226823
Score = 28.2 bits (14), Expect(8) = 3.1 Identities = 14/14 (100%) Strand = Plus / Plus
Query: 949 ctggtgaagtttat 962 |||||||||||||| Sbjct: 301020 ctggtgaagtttat 301033
Score = 28.2 bits (14), Expect(8) = 3.1 Identities = 14/14 (100%) Strand = Plus / Plus
Query: 1070 ttattatttaattt 1083 |||||||||||||| Sbjct: 358025 ttattatttaattt 358038
Lambda K H 1.37 0.711 1.31
Matrix: blastn matrix:1 -3 Number of Sequences: 92845959 Number of Hits to DB: 1,148,226,879 Number of extensions: 79519303 Number of successful extensions: 8281297 Number of sequences better than 10.0: 1475 Length of query: 1174 Length of database: 95,242,211,685 Length adjustment: 24 Effective length of query: 1150 Effective length of database: 97,308,875,965 Effective search space: 111905207359750 Effective search space used: 111905207359750 X1: 11 (21.8 bits) S2: 22 (44.1 bits)
|
protein update |
2009. 7.13 |
Homology vs Protein |
Query= Contig-U15051-1 (Contig-U15051-1Q) /CSM_Contig/Contig-U15051-1Q.Seq.d (1174 letters)
Database: nrp_B 3,236,559 sequences; 1,051,180,864 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
X52688_2(X52688|pid:none) D.discoideum CABP1 gene for CABP1 cAMP... 364 4e-99 M36176_1(M36176|pid:none) D.discoideum cAMP binding protein mRNA... 364 4e-99 (P34122) RecName: Full=cAMP-binding protein 2; Short=CA... 300 9e-80 B49752(B49752) cAMP-binding protein 1 homolog 31K form - slime m... 300 9e-80 M36174_1(M36174|pid:none) D.discoideum p34 (CABP1-related gene) ... 296 1e-78 CP000230_890(CP000230|pid:none) Rhodospirillum rubrum ATCC 11170... 195 3e-48 CP000713_75(CP000713|pid:none) Psychrobacter sp. PRwf-1, complet... 189 2e-46 CP000075_811(CP000075|pid:none) Pseudomonas syringae pv. syringa... 187 5e-46 AE000513_2175(AE000513|pid:none) Deinococcus radiodurans R1 chro... 187 6e-46 (P18782) RecName: Full=Tellurium resistance protein terE; &E307... 187 8e-46 AP006726_231(AP006726|pid:none) Klebsiella pneumoniae NTUH-K2044... 187 8e-46 CP000720_3734(CP000720|pid:none) Yersinia pseudotuberculosis IP ... 186 1e-45 CP000783_1746(CP000783|pid:none) Enterobacter sakazakii ATCC BAA... 186 2e-45 CP000817_306(CP000817|pid:none) Lysinibacillus sphaericus C3-41,... 185 2e-45 AE009952_552(AE009952|pid:none) Yersinia pestis KIM, complete ge... 185 3e-45 CP000058_805(CP000058|pid:none) Pseudomonas syringae pv. phaseol... 185 3e-45 AE017333_322(AE017333|pid:none) Bacillus licheniformis DSM 13, c... 184 4e-45 DQ164098_23(DQ164098|pid:none) Streptomyces hygroscopicus subsp.... 184 4e-45 BA000030_900(BA000030|pid:none) Streptomyces avermitilis MA-4680... 184 5e-45 BA000030_5810(BA000030|pid:none) Streptomyces avermitilis MA-468... 183 9e-45 AE005174_1021(AE005174|pid:none) Escherichia coli O157:H7 EDL933... 183 9e-45 (Q52358) RecName: Full=Tellurium resistance protein terE; &BX66... 183 1e-44 AL939119_155(AL939119|pid:none) Streptomyces coelicolor A3(2) co... 182 2e-44 AE009952_551(AE009952|pid:none) Yersinia pestis KIM, complete ge... 182 3e-44 AF0037(AF0037) tellurium resistance protein [imported] - Yersini... 182 3e-44 AP009493_4049(AP009493|pid:none) Streptomyces griseus subsp. gri... 181 3e-44 CP000510_1222(CP000510|pid:none) Psychromonas ingrahamii 37, com... 181 3e-44 CR543861_1794(CR543861|pid:none) Acinetobacter sp. ADP1 complete... 181 3e-44 CP000560_267(CP000560|pid:none) Bacillus amyloliquefaciens FZB42... 181 6e-44 AL939106_92(AL939106|pid:none) Streptomyces coelicolor A3(2) com... 181 6e-44 AP009493_6479(AP009493|pid:none) Streptomyces griseus subsp. gri... 180 1e-43 CP000058_806(CP000058|pid:none) Pseudomonas syringae pv. phaseol... 179 2e-43 AE016853_921(AE016853|pid:none) Pseudomonas syringae pv. tomato ... 179 2e-43 AL939112_113(AL939112|pid:none) Streptomyces coelicolor A3(2) co... 178 4e-43 CP000436_641(CP000436|pid:none) Haemophilus somnus 129PT, comple... 177 5e-43 BA000030_5811(BA000030|pid:none) Streptomyces avermitilis MA-468... 177 6e-43 AE000513_2179(AE000513|pid:none) Deinococcus radiodurans R1 chro... 177 6e-43 CR555307_233(CR555307|pid:none) Azoarcus sp. EbN1 plasmid 1. 175 2e-42 AP006726_230(AP006726|pid:none) Klebsiella pneumoniae NTUH-K2044... 174 4e-42 BA000030_7394(BA000030|pid:none) Streptomyces avermitilis MA-468... 174 4e-42 AM942759_2361(AM942759|pid:none) Proteus mirabilis strain HI4320... 174 5e-42 CP000393_611(CP000393|pid:none) Trichodesmium erythraeum IMS101,... 174 5e-42 EU595750_13(EU595750|pid:none) Pseudomonas aeruginosa strain PAC... 174 7e-42 CP000152_268(CP000152|pid:none) Burkholderia sp. 383 chromosome ... 173 1e-41 CP000382_2160(CP000382|pid:none) Clostridium novyi NT, complete ... 173 1e-41 (P18781) RecName: Full=Tellurium resistance protein terD; &D307... 172 2e-41 CP000510_2425(CP000510|pid:none) Psychromonas ingrahamii 37, com... 172 2e-41 CP000750_4402(CP000750|pid:none) Kineococcus radiotolerans SRS30... 172 2e-41 CP000436_642(CP000436|pid:none) Haemophilus somnus 129PT, comple... 172 3e-41 CP000432_198(CP000432|pid:none) Rhodococcus jostii RHA1 plasmid ... 171 4e-41 AF168355_6(AF168355|pid:none) Proteus mirabilis tellurite resist... 171 6e-41 AP009493_341(AP009493|pid:none) Streptomyces griseus subsp. gris... 171 6e-41 CP000082_763(CP000082|pid:none) Psychrobacter arcticus 273-4, co... 170 8e-41 AJ238043_3(AJ238043|pid:none) Escherichia coli plasmid terB, ter... 170 1e-40 CP000612_332(CP000612|pid:none) Desulfotomaculum reducens MI-1, ... 169 2e-40 CP001287_2003(CP001287|pid:none) Cyanothece sp. PCC 8801, comple... 169 2e-40 CP000750_3283(CP000750|pid:none) Kineococcus radiotolerans SRS30... 167 7e-40 CP000813_259(CP000813|pid:none) Bacillus pumilus SAFR-032, compl... 167 9e-40 AE017194_513(AE017194|pid:none) Bacillus cereus ATCC 10987, comp... 167 9e-40 CP001287_2001(CP001287|pid:none) Cyanothece sp. PCC 8801, comple... 166 1e-39 CP000382_2159(CP000382|pid:none) Clostridium novyi NT, complete ... 166 1e-39 AP008955_5867(AP008955|pid:none) Brevibacillus brevis NBRC 10059... 166 1e-39 CP000227_431(CP000227|pid:none) Bacillus cereus Q1, complete gen... 166 2e-39 CP000431_2417(CP000431|pid:none) Rhodococcus jostii RHA1, comple... 165 3e-39 CP000001_364(CP000001|pid:none) Bacillus cereus E33L, complete g... 165 3e-39 CP000612_334(CP000612|pid:none) Desulfotomaculum reducens MI-1, ... 165 3e-39 CT573213_4957(CT573213|pid:none) Frankia alni str. ACN14A chromo... 165 3e-39 AE016877_374(AE016877|pid:none) Bacillus cereus ATCC 14579, comp... 164 4e-39 AE016877_373(AE016877|pid:none) Bacillus cereus ATCC 14579, comp... 164 6e-39 CP001176_388(CP001176|pid:none) Bacillus cereus B4264, complete ... 164 6e-39 CP000853_691(CP000853|pid:none) Alkaliphilus oremlandii OhILAs, ... 164 6e-39 AP008957_595(AP008957|pid:none) Rhodococcus erythropolis PR4 DNA... 164 7e-39 AE017355_368(AE017355|pid:none) Bacillus thuringiensis serovar k... 163 1e-38 CP000783_1745(CP000783|pid:none) Enterobacter sakazakii ATCC BAA... 163 1e-38 CP001186_376(CP001186|pid:none) Bacillus cereus G9842, complete ... 163 1e-38 AE016879_372(AE016879|pid:none) Bacillus anthracis str. Ames, co... 163 1e-38 AE017225_375(AE017225|pid:none) Bacillus anthracis str. Sterne, ... 163 1e-38 CP000813_260(CP000813|pid:none) Bacillus pumilus SAFR-032, compl... 163 1e-38 CP000227_432(CP000227|pid:none) Bacillus cereus Q1, complete gen... 162 2e-38 CP000806_2523(CP000806|pid:none) Cyanothece sp. ATCC 51142 circu... 162 2e-38 AE017194_514(AE017194|pid:none) Bacillus cereus ATCC 10987, comp... 161 4e-38 CP000510_1224(CP000510|pid:none) Psychromonas ingrahamii 37, com... 161 4e-38 CP000249_3027(CP000249|pid:none) Frankia sp. CcI3, complete geno... 159 2e-37 AE016879_373(AE016879|pid:none) Bacillus anthracis str. Ames, co... 158 3e-37 AM180355_1686(AM180355|pid:none) Clostridium difficile 630 compl... 158 3e-37 AM180355_1855(AM180355|pid:none) Clostridium difficile 630 compl... 157 5e-37 A97074(A97074) hypothetical protein CAC1412 [imported] - Clostri... 157 9e-37 CP000393_4436(CP000393|pid:none) Trichodesmium erythraeum IMS101... 155 3e-36 CP000393_4437(CP000393|pid:none) Trichodesmium erythraeum IMS101... 152 3e-35 (O34384) RecName: Full=Uncharacterized protein yceE; &AB000617_... 149 1e-34 CP000249_1489(CP000249|pid:none) Frankia sp. CcI3, complete geno... 149 2e-34 CP000249_256(CP000249|pid:none) Frankia sp. CcI3, complete genome. 149 2e-34 CP000612_333(CP000612|pid:none) Desulfotomaculum reducens MI-1, ... 149 2e-34 CT573213_2250(CT573213|pid:none) Frankia alni str. ACN14A chromo... 145 2e-33 CT573213_591(CT573213|pid:none) Frankia alni str. ACN14A chromos... 145 4e-33 AE017194_512(AE017194|pid:none) Bacillus cereus ATCC 10987, comp... 143 1e-32 CP000764_365(CP000764|pid:none) Bacillus cereus subsp. cytotoxis... 142 3e-32 CP000820_6440(CP000820|pid:none) Frankia sp. EAN1pec, complete g... 142 3e-32 CP000903_376(CP000903|pid:none) Bacillus weihenstephanensis KBAB... 141 4e-32 CP000485_374(CP000485|pid:none) Bacillus thuringiensis str. Al H... 140 1e-31 AP008955_5866(AP008955|pid:none) Brevibacillus brevis NBRC 10059... 139 1e-31 CP000001_363(CP000001|pid:none) Bacillus cereus E33L, complete g... 139 1e-31 CP001283_395(CP001283|pid:none) Bacillus cereus AH820, complete ... 139 2e-31 AE001437_1395(AE001437|pid:none) Clostridium acetobutylicum ATCC... 139 3e-31 CP000806_2521(CP000806|pid:none) Cyanothece sp. ATCC 51142 circu... 138 3e-31 AE015927_1999(AE015927|pid:none) Clostridium tetani E88, complet... 138 4e-31 AM180355_1687(AM180355|pid:none) Clostridium difficile 630 compl... 136 1e-30 CP000813_258(CP000813|pid:none) Bacillus pumilus SAFR-032, compl... 133 1e-29 AM180355_1856(AM180355|pid:none) Clostridium difficile 630 compl... 132 2e-29 CP000853_690(CP000853|pid:none) Alkaliphilus oremlandii OhILAs, ... 131 5e-29 CP000813_2656(CP000813|pid:none) Bacillus pumilus SAFR-032, comp... 129 2e-28 CP000560_266(CP000560|pid:none) Bacillus amyloliquefaciens FZB42... 127 8e-28 (P81100) RecName: Full=Stress response protein SCP2; &AB000617_... 126 2e-27 AM406671_1333(AM406671|pid:none) Lactococcus lactis subsp. cremo... 122 2e-26 AM406671_1331(AM406671|pid:none) Lactococcus lactis subsp. cremo... 122 2e-26 CP000393_4430(CP000393|pid:none) Trichodesmium erythraeum IMS101... 121 4e-26 AM747720_2264(AM747720|pid:none) Burkholderia cenocepacia J2315 ... 119 2e-25 CP000151_2315(CP000151|pid:none) Burkholderia sp. 383 chromosome... 119 2e-25 CP000614_2231(CP000614|pid:none) Burkholderia vietnamiensis G4 c... 117 6e-25 CP000673_2290(CP000673|pid:none) Clostridium kluyveri DSM 555, c... 116 1e-24 CP000127_960(CP000127|pid:none) Nitrosococcus oceani ATCC 19707,... 112 3e-23 CR543861_1807(CR543861|pid:none) Acinetobacter sp. ADP1 complete... 110 7e-23 CP000436_643(CP000436|pid:none) Haemophilus somnus 129PT, comple... 109 2e-22 AM236864_1(AM236864|pid:none) Escherichia coli pDV17 plasmid, te... 108 4e-22 (Q52353) RecName: Full=Tellurium resistance protein terZ; &BX66... 108 5e-22 AJ888883_10(AJ888883|pid:none) Escherichia coli plasmid pNT3B, t... 108 5e-22 CR543861_1791(CR543861|pid:none) Acinetobacter sp. ADP1 complete... 107 8e-22 CP000783_1741(CP000783|pid:none) Enterobacter sakazakii ATCC BAA... 107 1e-21 AP006618_5580(AP006618|pid:none) Nocardia farcinica IFM 10152 DN... 106 1e-21 AP011115_2169(AP011115|pid:none) Rhodococcus opacus B4 DNA, comp... 105 2e-21 CT573213_5925(CT573213|pid:none) Frankia alni str. ACN14A chromo... 105 3e-21 BX936398_352(BX936398|pid:none) Yersinia pseudotuberculosis IP32... 104 5e-21 AP006726_226(AP006726|pid:none) Klebsiella pneumoniae NTUH-K2044... 104 5e-21 AE009952_547(AE009952|pid:none) Yersinia pestis KIM, complete ge... 104 5e-21 CP000820_887(CP000820|pid:none) Frankia sp. EAN1pec, complete ge... 104 7e-21 CR555307_236(CR555307|pid:none) Azoarcus sp. EbN1 plasmid 1. 103 9e-21 CP000082_761(CP000082|pid:none) Psychrobacter arcticus 273-4, co... 103 1e-20 AP008955_5869(AP008955|pid:none) Brevibacillus brevis NBRC 10059... 103 1e-20 CP000965_187(CP000965|pid:none) Klebsiella pneumoniae 342 plasmi... 103 2e-20 CR555307_230(CR555307|pid:none) Azoarcus sp. EbN1 plasmid 1. 102 3e-20 CP000750_3280(CP000750|pid:none) Kineococcus radiotolerans SRS30... 102 3e-20 CP000965_197(CP000965|pid:none) Klebsiella pneumoniae 342 plasmi... 99 2e-19 AB0074(AB0074) probable tellurium resistance protein terX [impor... 99 2e-19 AF168355_2(AF168355|pid:none) Proteus mirabilis tellurite resist... 99 3e-19 (P75012) RecName: Full=Tellurium resistance protein terX; &BX66... 98 5e-19 CP000075_807(CP000075|pid:none) Pseudomonas syringae pv. syringa... 98 6e-19 CP000533_41(CP000533|pid:none) Polaromonas naphthalenivorans CJ2... 98 6e-19 CP000533_52(CP000533|pid:none) Polaromonas naphthalenivorans CJ2... 96 2e-18 CP000152_273(CP000152|pid:none) Burkholderia sp. 383 chromosome ... 91 8e-17 BA000030_6359(BA000030|pid:none) Streptomyces avermitilis MA-468... 88 5e-16 AE017225_857(AE017225|pid:none) Bacillus anthracis str. Sterne, ... 87 9e-16 AP009493_5614(AP009493|pid:none) Streptomyces griseus subsp. gri... 87 1e-15 AP009493_6478(AP009493|pid:none) Streptomyces griseus subsp. gri... 86 2e-15 AJ937740_39(AJ937740|pid:none) Streptomyces ambofaciens ATCC 238... 82 3e-14 CP001215_3534(CP001215|pid:none) Bacillus anthracis str. CDC 684... 77 2e-12 AP006618_5048(AP006618|pid:none) Nocardia farcinica IFM 10152 DN... 76 2e-12 AL939118_97(AL939118|pid:none) Streptomyces coelicolor A3(2) com... 75 3e-12 BA000030_1432(BA000030|pid:none) Streptomyces avermitilis MA-468... 73 2e-11 CP000828_1681(CP000828|pid:none) Acaryochloris marina MBIC11017,... 72 3e-11 AJ888883_1(AJ888883|pid:none) Escherichia coli plasmid pNT3B, te... 72 3e-11 AP011115_366(AP011115|pid:none) Rhodococcus opacus B4 DNA, compl... 69 3e-10 AP008957_593(AP008957|pid:none) Rhodococcus erythropolis PR4 DNA... 67 9e-10 AM238663_1021(AM238663|pid:none) Streptomyces ambofaciens ATCC 2... 67 2e-09 BX936398_353(BX936398|pid:none) Yersinia pseudotuberculosis IP32... 66 2e-09 AL939107_164(AL939107|pid:none) Streptomyces coelicolor A3(2) co... 66 2e-09 AE009952_548(AE009952|pid:none) Yersinia pestis KIM, complete ge... 66 3e-09 AE017042_442(AE017042|pid:none) Yersinia pestis biovar Microtus ... 66 3e-09 AP009493_5137(AP009493|pid:none) Streptomyces griseus subsp. gri... 64 1e-08 AL939112_109(AL939112|pid:none) Streptomyces coelicolor A3(2) co... 64 1e-08 AP006618_2029(AP006618|pid:none) Nocardia farcinica IFM 10152 DN... 61 9e-08 AP006726_227(AP006726|pid:none) Klebsiella pneumoniae NTUH-K2044... 60 1e-07 AY328010_3(AY328010|pid:none) Symbiont bacterium of Paederus fus... 58 6e-07 AL939122_261(AL939122|pid:none) Streptomyces coelicolor A3(2) co... 57 1e-06 A85607(A85607;B85658) hypothetical protein terA [imported] - Esc... 57 1e-06 AJ888883_11(AJ888883|pid:none) Escherichia coli plasmid pNT3B, t... 57 1e-06 BX664015_76(BX664015|pid:none) Serratia marcescens plasmid R478.... 57 2e-06 CP001191_3342(CP001191|pid:none) Rhizobium leguminosarum bv. tri... 57 2e-06 U59239_11(U59239|pid:none) Serratia marcescens plasmid R478 puta... 57 2e-06 CP000783_1747(CP000783|pid:none) Enterobacter sakazakii ATCC BAA... 55 6e-06 AE016853_917(AE016853|pid:none) Pseudomonas syringae pv. tomato ... 54 8e-06 CP000783_1742(CP000783|pid:none) Enterobacter sakazakii ATCC BAA... 54 1e-05 CP000510_1223(CP000510|pid:none) Psychromonas ingrahamii 37, com... 54 1e-05 CP000820_2274(CP000820|pid:none) Frankia sp. EAN1pec, complete g... 53 2e-05 AF168355_3(AF168355|pid:none) Proteus mirabilis tellurite resist... 52 3e-05 AC0037(AC0037) probable tellurite resistance protein terA [impor... 52 4e-05 CP000965_181(CP000965|pid:none) Klebsiella pneumoniae 342 plasmi... 52 5e-05 AE014187_405(AE014187|pid:none) Plasmodium falciparum 3D7 chromo... 52 5e-05 AL844505_232(AL844505|pid:none) Plasmodium falciparum 3D7 chromo... 52 5e-05 CP000323_762(CP000323|pid:none) Psychrobacter cryohalolentis K5,... 51 9e-05 AY378100_34(AY378100|pid:none) Klebsiella pneumoniae plasmid pLV... 50 2e-04 (Q54VC4) RecName: Full=Activating signal cointegrator 1 complex ... 49 3e-04 CP000152_272(CP000152|pid:none) Burkholderia sp. 383 chromosome ... 49 3e-04 CP000082_760(CP000082|pid:none) Psychrobacter arcticus 273-4, co... 49 3e-04 AL031745_47(AL031745|pid:none) Plasmodium falciparum DNA from MA... 47 0.001 (P04929) Histidine-rich glycoprotein precursor. &KGZQHL(A22692)... 47 0.001 (Q1ZXH2) RecName: Full=Probable serine/threonine-protein kinase ... 47 0.001 AL929357_69(AL929357|pid:none) Plasmodium falciparum strain 3D7,... 46 0.002 AL844508_227(AL844508|pid:none) Plasmodium falciparum 3D7 chromo... 46 0.002 CR543861_1797(CR543861|pid:none) Acinetobacter sp. ADP1 complete... 46 0.003 AP008957_603(AP008957|pid:none) Rhodococcus erythropolis PR4 DNA... 45 0.004 AP011115_2167(AP011115|pid:none) Rhodococcus opacus B4 DNA, comp... 45 0.004 AY056469_1(AY056469|pid:none) Petromyzon marinus homeobox protei... 45 0.004 AB210272_1(AB210272|pid:none) Oncorhynchus keta PPARG mRNA for p... 45 0.004 AB210271_3(AB210271|pid:none) Oncorhynchus keta SYN2, PPARG, RAF... 45 0.004 AP006618_4394(AP006618|pid:none) Nocardia farcinica IFM 10152 DN... 45 0.007 (Q8MP30) RecName: Full=Uncharacterized histidine-rich protein DD... 45 0.007 AE014298_202(AE014298|pid:none) Drosophila melanogaster chromoso... 45 0.007 (Q54KX0) RecName: Full=GATA zinc finger domain-containing protei... 45 0.007 AE014298_203(AE014298|pid:none) Drosophila melanogaster chromoso... 45 0.007 BA000030_3315(BA000030|pid:none) Streptomyces avermitilis MA-468... 44 0.009 CP000713_80(CP000713|pid:none) Psychrobacter sp. PRwf-1, complet... 44 0.011 AP009493_1714(AP009493|pid:none) Streptomyces griseus subsp. gri... 44 0.015 AE000513_2177(AE000513|pid:none) Deinococcus radiodurans R1 chro... 44 0.015 AE014186_457(AE014186|pid:none) Plasmodium falciparum 3D7 chromo... 43 0.019 (Q54HX6) RecName: Full=Myb-like protein I; 43 0.025 AM910991_170(AM910991|pid:none) Plasmodium knowlesi strain H chr... 43 0.025 AE005174_1022(AE005174|pid:none) Escherichia coli O157:H7 EDL933... 42 0.032 U70651_1(U70651|pid:none) Mus musculus musculus sex determining ... 42 0.032 AL844508_163(AL844508|pid:none) Plasmodium falciparum 3D7 chromo... 42 0.032 U70652_1(U70652|pid:none) Mus musculus musculus sex determining ... 42 0.032 CP000750_261(CP000750|pid:none) Kineococcus radiotolerans SRS302... 42 0.042 AY228175_1(AY228175|pid:none) Streptomyces murayamaensis putativ... 42 0.042 AE014188_476(AE014188|pid:none) Plasmodium falciparum 3D7 chromo... 42 0.055 L04161_1(L04161|pid:none) Plasmodium falciparum clone Pfg377 Pfs... 42 0.055 AL939117_184(AL939117|pid:none) Streptomyces coelicolor A3(2) co... 41 0.072 AL939125_56(AL939125|pid:none) Streptomyces coelicolor A3(2) com... 41 0.072 AL844509_288(AL844509|pid:none) Plasmodium falciparum 3D7 chromo... 41 0.072 AE014188_477(AE014188|pid:none) Plasmodium falciparum 3D7 chromo... 41 0.072 AP008957_4869(AP008957|pid:none) Rhodococcus erythropolis PR4 DN... 41 0.094 Z98547_25(Z98547|pid:none) Plasmodium falciparum MAL3P3, complet... 40 0.12 AL844502_99(AL844502|pid:none) Plasmodium falciparum 3D7 chromos... 40 0.12 AL844507_17(AL844507|pid:none) Plasmodium falciparum 3D7 chromos... 40 0.12 BA000030_2466(BA000030|pid:none) Streptomyces avermitilis MA-468... 40 0.16 A45597(A45597)DNA-directed RNA polymerase (EC 2.7.7.6) III large... 40 0.16 AC117075_53(AC117075|pid:none) Dictyostelium discoideum chromoso... 40 0.16 AL844509_589(AL844509|pid:none) Plasmodium falciparum 3D7 chromo... 40 0.16 (P27625) RecName: Full=DNA-directed RNA polymerase III subunit R... 40 0.16 (P36417) RecName: Full=G-box-binding factor; Short=GBF; 40 0.16 AJ249165_1(AJ249165|pid:none) Plasmodium falciparum gc-beta gene... 40 0.16 (Q54YB7) RecName: Full=Myb-like protein F; 40 0.21 (Q54X97) RecName: Full=Eukaryotic translation initiation factor ... 40 0.21 CP000612_330(CP000612|pid:none) Desulfotomaculum reducens MI-1, ... 39 0.27 CP000820_1267(CP000820|pid:none) Frankia sp. EAN1pec, complete g... 39 0.27 AY160100_1(AY160100|pid:none) Dictyostelium discoideum nucleotid... 39 0.27 AP005301_12(AP005301|pid:none) Oryza sativa Japonica Group genom... 39 0.27 AF474377_1(AF474377|pid:none) Dictyostelium discoideum Ras GTP e... 39 0.27 (Q55GU0) RecName: Full=Probable serine/threonine-protein kinase ... 39 0.27 AE014188_212(AE014188|pid:none) Plasmodium falciparum 3D7 chromo... 39 0.27 AL844506_42(AL844506|pid:none) Plasmodium falciparum 3D7 chromos... 39 0.36 AF362373_1(AF362373|pid:none) Dictyostelium discoideum histidine... 39 0.36 AL844508_66(AL844508|pid:none) Plasmodium falciparum 3D7 chromos... 39 0.36 AE014187_224(AE014187|pid:none) Plasmodium falciparum 3D7 chromo... 39 0.36 AX647805_1(AX647805|pid:none) Sequence 1997 from Patent EP1270724. 39 0.47 AE001362_146(AE001362|pid:none) Plasmodium falciparum 3D7 chromo... 38 0.61 AM942759_37(AM942759|pid:none) Proteus mirabilis strain HI4320, ... 38 0.61 CP000393_370(CP000393|pid:none) Trichodesmium erythraeum IMS101,... 38 0.61 S47042(S47042)protein kinase (EC 2.7.1.37) cdc2-related 1 - mala... 38 0.61 AE016877_4531(AE016877|pid:none) Bacillus cereus ATCC 14579, com... 38 0.80 BT055939_1(BT055939|pid:none) Zea mays full-length cDNA clone ZM... 38 0.80 CU640366_18(CU640366|pid:none) Podospora anserina genomic DNA ch... 38 0.80 CP000962_97(CP000962|pid:none) Clostridium botulinum A3 str. Loc... 38 0.80 AP006618_1604(AP006618|pid:none) Nocardia farcinica IFM 10152 DN... 37 1.0 CP000539_1789(CP000539|pid:none) Acidovorax sp. JS42, complete g... 37 1.0 AE016853_922(AE016853|pid:none) Pseudomonas syringae pv. tomato ... 37 1.0 U83086_1(U83086|pid:none) Dictyostelium discoideum LimA (limA) m... 37 1.0 AL844507_278(AL844507|pid:none) Plasmodium falciparum 3D7 chromo... 37 1.0 (Q54QR1) RecName: Full=LIM domain-containing protein A; 37 1.0 S14556(S14556;S14548) asparagine-rich protein (clone 18C1) - mal... 37 1.0 BC157989_1(BC157989|pid:none) Mus musculus mastermind-like domai... 37 1.0 AL034556_17(AL034556|pid:none) Plasmodium falciparum MAL3P5, com... 37 1.0 AF238886_1(AF238886|pid:none) Bacillus cereus strain ATCC 11778 ... 37 1.0 X65740_1(X65740|pid:none) Plasmodium falciparum P-type ATPase 3 ... 37 1.0 AL844506_148(AL844506|pid:none) Plasmodium falciparum 3D7 chromo... 37 1.4 (Q54KF2) RecName: Full=Putative uncharacterized protein DDB_G028... 37 1.4 AF009521_1(AF009521|pid:none) Mus spretus sex determining protei... 37 1.4 (Q62563) RecName: Full=Sex-determining region Y protein; AltName... 37 1.4 AF238887_1(AF238887|pid:none) Bacillus cereus strain ATCC 31293 ... 37 1.4 AE014185_210(AE014185|pid:none) Plasmodium falciparum 3D7 chromo... 37 1.4 (Q55GK3) RecName: Full=Myb-like protein M; 37 1.4 AF238894_1(AF238894|pid:none) Bacillus anthracis isolate A24 Vrr... 37 1.8 X17488_1(X17488|pid:none) Plasmodium falciparum mRNA for asparag... 37 1.8 AF238899_1(AF238899|pid:none) Bacillus anthracis isolate BA1035 ... 37 1.8 CP000903_4455(CP000903|pid:none) Bacillus weihenstephanensis KBA... 37 1.8 (Q54HS1) RecName: Full=Putative uncharacterized protein DDB_G028... 36 2.3 CP001186_4753(CP001186|pid:none) Bacillus cereus G9842, complete... 36 2.3 AE001825_55(AE001825|pid:none) Deinococcus radiodurans R1 chromo... 36 3.0 AC116330_17(AC116330|pid:none) Dictyostelium discoideum chromoso... 36 3.0 AL844505_133(AL844505|pid:none) Plasmodium falciparum 3D7 chromo... 36 3.0 AC116984_202(AC116984|pid:none) Dictyostelium discoideum chromos... 36 3.0 BC078490_1(BC078490|pid:none) Xenopus laevis hypothetical protei... 36 3.0 EF442125_1(EF442125|pid:none) Plasmodium falciparum isolate 609 ... 36 3.0 AL844507_30(AL844507|pid:none) Plasmodium falciparum 3D7 chromos... 35 4.0 AC116027_1(AC116027|pid:none) Dictyostelium discoideum strain AX... 35 4.0 AB195797_1(AB195797|pid:none) Lethenteron japonicum MBL mRNA for... 35 4.0 AL844505_50(AL844505|pid:none) Plasmodium falciparum 3D7 chromos... 35 4.0 AL844504_263(AL844504|pid:none) Plasmodium falciparum 3D7 chromo... 35 4.0 CP001104_1930(CP001104|pid:none) Eubacterium eligens ATCC 27750,... 35 4.0 AE014188_70(AE014188|pid:none) Plasmodium falciparum 3D7 chromos... 35 4.0 (O97239) RecName: Full=Protein dopey homolog PFC0245c; &AL03455... 35 4.0 T22000(T22000)hypothetical protein F39H11.2 - Caenorhabditis ele... 35 4.0 BX294027_6(BX294027|pid:none) Neurospora crassa DNA linkage grou... 35 4.0 AE014186_157(AE014186|pid:none) Plasmodium falciparum 3D7 chromo... 35 4.0 AE014185_171(AE014185|pid:none) Plasmodium falciparum 3D7 chromo... 35 4.0 (P10180) RecName: Full=Homeobox protein cut; &AE014298_1092(AE0... 35 5.2 BC167973_1(BC167973|pid:none) Danio rerio si:ch211-206a7.2, mRNA... 35 5.2 DQ864485_1(DQ864485|pid:none) Plasmodium falciparum isolate 837 ... 35 5.2 AF228692_1(AF228692|pid:none) Caenorhabditis elegans TBP-like fa... 35 5.2 Z81079_5(Z81079|pid:none) Caenorhabditis elegans Cosmid F39H11, ... 35 5.2 AM910992_72(AM910992|pid:none) Plasmodium knowlesi strain H chro... 35 5.2 (Q54SY5) RecName: Full=Putative uncharacterized protein DDB_G028... 35 5.2 AE014298_1091(AE014298|pid:none) Drosophila melanogaster chromos... 35 5.2 AC117075_31(AC117075|pid:none) Dictyostelium discoideum chromoso... 35 5.2 AM910994_695(AM910994|pid:none) Plasmodium knowlesi strain H chr... 35 5.2 CP000001_4445(CP000001|pid:none) Bacillus cereus E33L, complete ... 35 6.8 (Q8I3Z1) RecName: Full=MATH and LRR domain-containing protein PF... 35 6.8 (Q54B29) RecName: Full=Uncharacterized membrane protein DDB_G029... 35 6.8 AL844507_104(AL844507|pid:none) Plasmodium falciparum 3D7 chromo... 35 6.8 AC116924_12(AC116924|pid:none) Dictyostelium discoideum chromoso... 35 6.8 (Q75JZ0) RecName: Full=GATA zinc finger domain-containing protei... 35 6.8 AE014186_440(AE014186|pid:none) Plasmodium falciparum 3D7 chromo... 35 6.8 AC115612_28(AC115612|pid:none) Dictyostelium discoideum chromoso... 35 6.8 AE014187_149(AE014187|pid:none) Plasmodium falciparum 3D7 chromo... 35 6.8 AE017224_1001(AE017224|pid:none) Brucella abortus biovar 1 str. ... 34 8.8 CP000873_1093(CP000873|pid:none) Brucella canis ATCC 23365 chrom... 34 8.8 AL844509_128(AL844509|pid:none) Plasmodium falciparum 3D7 chromo... 34 8.8 AY812971_1(AY812971|pid:none) Schistosoma japonicum SJCHGC00913 ... 34 8.8 AE014187_49(AE014187|pid:none) Plasmodium falciparum 3D7 chromos... 34 8.8 AE014134_613(AE014134|pid:none) Drosophila melanogaster chromoso... 34 8.8 (Q54Q69) RecName: Full=Hybrid signal transduction histidine kina... 34 8.8 AE014296_1407(AE014296|pid:none) Drosophila melanogaster chromos... 34 8.8 AY814309_1(AY814309|pid:none) Schistosoma japonicum SJCHGC02036 ... 34 8.8 AY830454_1(AY830454|pid:none) Petromyzon marinus SoxF (SoxF) mRN... 34 8.8 AE014188_23(AE014188|pid:none) Plasmodium falciparum 3D7 chromos... 34 8.8 AL844505_255(AL844505|pid:none) Plasmodium falciparum 3D7 chromo... 34 8.8 EF026246_1(EF026246|pid:none) Steinernema carpocapsae Ahn-4 mRNA... 34 8.8 AL844504_192(AL844504|pid:none) Plasmodium falciparum 3D7 chromo... 34 8.8 AY052066_1(AY052066|pid:none) Drosophila melanogaster LP11035 fu... 34 8.8 EF193062_1(EF193062|pid:none) Plasmodium falciparum eIF4G mRNA, ... 34 8.8 AL844505_136(AL844505|pid:none) Plasmodium falciparum 3D7 chromo... 34 8.8 AE013599_2730(AE013599|pid:none) Drosophila melanogaster chromos... 34 8.8 AY814029_1(AY814029|pid:none) Schistosoma japonicum SJCHGC02037 ... 34 8.8 CR382399_52(CR382399|pid:none) Plasmodium falciparum chromosome ... 34 8.8 CR382401_2(CR382401|pid:none) Plasmodium falciparum chromosome 6... 34 8.8 AC116956_6(AC116956|pid:none) Dictyostelium discoideum chromosom... 34 8.8 J03986_1(J03986|pid:none) P.falciparum 10b antigen gene, partial... 34 8.8 (Q55DE7) RecName: Full=Ataxin-2 homolog; 34 8.8
>X52688_2(X52688|pid:none) D.discoideum CABP1 gene for CABP1 cAMP binding protein. Length = 296
Score = 364 bits (934), Expect = 4e-99 Identities = 181/191 (94%), Positives = 184/191 (96%) Frame = +3
Query: 486 ISLVKNQQISLTKEDPTLRKLTIGLGWDVNTTPTAPFDLDAVVFMLNAQGRVRTSQDFIF 665 ISLVKNQQISLTKEDPTLRKLTIGLGWDVNTTPTAPFDLDAVVFMLNAQGRVRTSQDFIF Sbjct: 106 ISLVKNQQISLTKEDPTLRKLTIGLGWDVNTTPTAPFDLDAVVFMLNAQGRVRTSQDFIF 165
Query: 666 YNNKVSRDNSVSHQGDNLTGQGEGDDEVVLVNLQAVSPDVTRLVFAVTIHLADERRQNFT 845 YNNKVSRDNSVSHQGDNLTGQGEGDDEVVLVNLQAVSPDVTRLVFAVTIHLADERRQNFT Sbjct: 166 YNNKVSRDNSVSHQGDNLTGQGEGDDEVVLVNLQAVSPDVTRLVFAVTIHLADERRQNFT 225
Query: 846 MVPRAFIRVANQETGRNICRYDLSQEGGPNTALIAGEVYRDPSNPNNWSFVAVGKGMQGA 1025 MVPRAFIRVANQETGRNICRYDLSQEGGPNTALIAGEVYRDPSNPNNWS + + K + Sbjct: 226 MVPRAFIRVANQETGRNICRYDLSQEGGPNTALIAGEVYRDPSNPNNWSLLLLVKVCKAF 285
Query: 1026 LPGLLQIFGCQ 1058 LPGLLQIFGCQ Sbjct: 286 LPGLLQIFGCQ 296
Lambda K H 0.318 0.134 0.401
Gapped Lambda K H 0.267 0.0410 0.140
Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 3236559 Number of Hits to DB: 1,371,127,901 Number of extensions: 24140657 Number of successful extensions: 103850 Number of sequences better than 10.0: 346 Number of HSP's gapped: 94610 Number of HSP's successfully gapped: 478 Length of query: 391 Length of database: 1,051,180,864 Length adjustment: 130 Effective length of query: 261 Effective length of database: 630,428,194 Effective search space: 164541758634 Effective search space used: 164541758634 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 32 (16.9 bits)
|
PSORT |
|
VS (DIR, S) |
2 |
VH (FL, L) |
0 |
VF (FL, S) |
5 |
AH (FL, L) |
0 |
AF (FL, S) |
0 |
SL (DIR, L) |
9 |
SS (DIR, S) |
1 |
SH (FL, L) |
0 |
SF (FL, S) |
5 |
CH (FL, L) |
3 |
CF (FL, S) |
7 |
FCL (DIR, L) |
0 |
FC (DIR, S) |
3 |
FC-IC (SUB) |
1 |