Contig-U15045-1
Contig ID Contig-U15045-1
Contig update 2004. 6.11
Contig sequence
>Contig-U15045-1 (Contig-U15045-1Q) /CSM_Contig/Contig-U15045-1Q.Seq.d
ATAAATGAAGAAAGGTATACAAAAAAAAACACCTTTTATCGATAAAAGCC
AAATACTAAATAAAATTAATTAATGTGGCGTAACATAAAATTAATTAAAA
CAAACAAATTAATATACTTTATTATTTTTTTTTTTTACGAGGCAAAAAAT
AAATAATTATTATTTTTAACTTTTTTTTTTAAACACCATACCATTTTTTA
AAAAATAAATAATTATTATTTTTAACTTTTTTTTTATTATTTCTTTGTTT
TCCAAAATTCTCCTAATTTAAGTTTCGCCATTGTTTATTAAAAAAAAAAA
AAAAAAATTTCTAGGATGATTAGAATAATTAATGGACAAACTTATTTCGC
ATCAAAATACCCAAATATTATAATACCAGAGAAACTAATACCTCAATTAA
TTTTAAAACATATTAGATCTAAACCTGATCAAGTTTTATTAGTTGATGGT
TTAACTTTTAAAGAATATTCTTCTCATTTTGTCGCTGATACAATTGAAAA
GGTCGCATGTGGTTTAAATAAATTAAATATAAAAAAAGGTGATGTACTTG
GAGTAATTCTACCAAATTTACCAGAATATGTACCAATATTTCATGGTACA
TTATTGATGGGAGGCATTACATCATTAGTTAATCCAGACTATACAATTGA
AGAGTTATCACATACATTAGCAACAGTTTCACCAAGATATTTAGCAGTAA
CATTAGCAGTATATGAAAAGATTAAAAATGATTTAAAAAGAGTTTTTCCA
AGTGTTGAAAAAGTGATTTTAGTCGATATTGCAGGTCAAACTTTAAAAGA
AATTGATCAATTAACTTTATCTAGTGATGGAATTGTAATGTCATTCAATC
AACTAATTAATAATAATGGTAAAGATTACCCAATCGTTAGAATTGACCCA
AAGAAAGATACAGCTATTATTCCATTTTCAAGTGGTACAACTGGATTATT
TAAAGGTGTTTGTTTAAGTCATCATAATATCGTTTCCAATACATATCAAA
CTCAAACCATTGAAACATCAACCTATAAAAAGAATGATACAGTTATGGGT
ATATTACCTTTCTTTCATATCTATGGTTTAATGTTATTCTTAATGTTGAT
GGTGAAACAAGGTCATCGTGTTGTTGTCTTACCAAAATTTGAACCAGTTA
GATTCTTGGAGTTAATTCAAAAGTATAAGGTTGCAATTTCATTCATTGTT
CCACCAGTTGCTATCATGTTTGCAAAATCACCAATCGTCGATAAATTTGA
TCTCTCAAGTTTACGTACACTATTTAGTGGTGCTGCTCCATTGAGTTCAG
AGGTTGAAGATTTAATTAAAGAAAGATTCAAAGGCAGACTTGTAATTAAA
CAAGGTTATGGTGCTACCGAACTTAGTCCAGCCTGTTTTGTAATTCCAAG
TGGATTAGTTAAATCTGGTTCCGCTGGTATCCTCTTACCCAATCAATTGG
CTAAAATCATCTCTCCAGAGACTGGTGAGAATTTAGGTATGGGTGAAAAG
GGTGAAATCTGTATTAAAGGTCCAAATGTTATGTTGGGTTATTATAACAA
TGAAAAGGCAACCAATGAAGTCATAGATAAAGATGGATTCTTAAAAACTG
GTGATATTGGTTACGTCGATGAAGATGGTTATTACTTTATCGTCGATAGA
TCAAAGGAATTGATCAAATGTAAAGGTTTCCAAGTACCTCCTGCCGAATT
GGAGGCATTACTATTATCTCATCCAAAAGTTGCAGATGCCTGTGTAGTAG
GTCTTTCAAAAGGTGATATGGGTGAAGTACCAAGAGGTTTCGTTGTTATT
AAACAAAATGAATCTCTAACCGAAAAAGAACTCTTAGATTGGGCCCATCC
AAAAATTGCAAATTATAAACATTTCAGAGGTGGTATCTTTTTCATACCTG
CAATTCCTAAATCTGCAACCGGTAAACTATTACGTAAAAATCTTAAAGAT
TTTAATAATCTAAAATTATAAAATTTTAAAAAAAGGTGTTAATTTTCCAC
TTTGACCAACAAGATTTTTCAAATTAATTTATTTATATAATGTAGGAAAC
CAAAATGCCAACAAATAAAATTTTAAGATATATCATAAAAAAAAAAAAAA
A

Gap no gap
Contig length 2101
Chromosome number (1..6, M) 4
Chromosome length 5430582
Start point 2417689
End point 2415589
Strand (PLUS/MINUS) MINUS
Number of clones 4
Number of EST 6
Link to clone list U15045
List of clone(s)

est1=SSI661F,1,609
est2=CFA204F,293,892
est3=SFI478Z,465,1198
est4=CFA204Z,871,1960
est5=SSA391Z,1350,2013
est6=SSI661Z,1450,2101
Translated Amino Acid sequence
ineerytkkntfyr*kpntk*n*lmwrnikliktnkliyfiifffyeaknk*llfltfff
khhtif*kinnyyf*lffyyffvfqnspnlsfaivy*KKKKKISRMIRIINGQTYFASKY
PNIIIPEKLIPQLILKHIRSKPDQVLLVDGLTFKEYSSHFVADTIEKVACGLNKLNIKKG
DVLGVILPNLPEYVPIFHGTLLMGGITSLVNPDYTIEELSHTLATVSPRYLAVTLAVYEK
IKNDLKRVFPSVEKVILVDIAGQTLKEIDQLTLSSDGIVMSFNQLINNNGKDYPIVRIDP
KKDTAIIPFSSGTTGLFKGVCLSHHNIVSNTYQTQTIETSTYKKNDTVMGILPFFHIYGL
MLFLMLMVKQGHRVVVLPKFEPVRFLELIQKYKVAISFIVPPVAIMFAKSPIVDKFDLSS
LRTLFSGAAPLSSEVEDLIKERFKGRLVIKQGYGATELSPACFVIPSGLVKSGSAGILLP
NQLAKIISPETGENLGMGEKGEICIKGPNVMLGYYNNEKATNEVIDKDGFLKTGDIGYVD
EDGYYFIVDRSKELIKCKGFQVPPAELEALLLSHPKVADACVVGLSKGDMGEVPRGFVVI
KQNESLTEKELLDWAHPKIANYKHFRGGIFFIPAIPKSATGKLLRKNLKDFNNLKL*nfk
krc*fstltnkifqinlfi*crkpkcqqikf*dis*kkkk


Translated Amino Acid sequence (All Frames)
Frame A:
ineerytkkntfyr*kpntk*n*lmwrnikliktnkliyfiifffyeaknk*llfltfff
khhtif*kinnyyf*lffyyffvfqnspnlsfaivy*KKKKKISRMIRIINGQTYFASKY
PNIIIPEKLIPQLILKHIRSKPDQVLLVDGLTFKEYSSHFVADTIEKVACGLNKLNIKKG
DVLGVILPNLPEYVPIFHGTLLMGGITSLVNPDYTIEELSHTLATVSPRYLAVTLAVYEK
IKNDLKRVFPSVEKVILVDIAGQTLKEIDQLTLSSDGIVMSFNQLINNNGKDYPIVRIDP
KKDTAIIPFSSGTTGLFKGVCLSHHNIVSNTYQTQTIETSTYKKNDTVMGILPFFHIYGL
MLFLMLMVKQGHRVVVLPKFEPVRFLELIQKYKVAISFIVPPVAIMFAKSPIVDKFDLSS
LRTLFSGAAPLSSEVEDLIKERFKGRLVIKQGYGATELSPACFVIPSGLVKSGSAGILLP
NQLAKIISPETGENLGMGEKGEICIKGPNVMLGYYNNEKATNEVIDKDGFLKTGDIGYVD
EDGYYFIVDRSKELIKCKGFQVPPAELEALLLSHPKVADACVVGLSKGDMGEVPRGFVVI
KQNESLTEKELLDWAHPKIANYKHFRGGIFFIPAIPKSATGKLLRKNLKDFNNLKL*nfk
krc*fstltnkifqinlfi*crkpkcqqikf*dis*kkkk


Frame B:
*mkkgiqkktpfidksqilnkin*cgvt*n*lkqtn*ytllfffftrqkinnyyf*lffl
ntipffkk*iiiifnfffiislfskilli*vsplfikkkkkkflg*le*lmdklishqnt
qil*yqrn*yln*f*nildlnlikfy*lmv*llknillilsliqlkrshvv*in*i*kkv
myle*fyqiyqnmyqyfmvhy*wealhh*liqtiqlksyhih*qqfhqdi*q*h*qymkr
lkmi*keffqvlkk*f*silqvkl*kklin*lylvmel*chsin*liimvkitqsleltq
rkiqllfhfqvvqldylkvfv*viiisfpihiklkplkhqpikrmiqlwvyylsfismv*
cys*c*w*nkvivllsyqnlnqldsws*fksirlqfhslfhqllsclqnhqssinlisqv
yvhylvvllh*vqrlki*lkkdskadl*lnkvmvlpnlvqpvl*fqvd*lnlvplvssyp
inwlksslqrlvri*vwvkrvksvlkvqmlcwviitmkrqpmks*ikmds*klvilvtsm
kmvitlssidqrn*snvkvskyllpnwrhyyyliqklqmpv**vfqkviwvkyqevslll
nkmnl*pkkns*igpiqklqiinisevvsfsylqflnlqpvnyyvkilkilii*nykilk
kgvnfpl*ptrffkliylynvgnqnank*nfkiyhkkkkk


Frame C:
k*rkvykkkhllsikaky*iklinva*hkin*nkqinilyyffflrgkk*iiiifnfff*
tpyhflknk*llfltffllflcfpkfs*fkfrhcllkkkkknf*dd*nn*wtnlfrikip
kyyntretntsinfkty*i*t*ssfis*wfnf*riffsfcr*yn*kgrmwfk*ikykkr*
ctwsnstkftrictniswyiidgrhyiis*srlyn*rvityisnsftkifssnissi*kd
*k*fkksfskc*ksdfsrycrsnfkrn*sinfi**wncnviqstn***w*rlpnr*n*pk
erysyysifkwynwii*rclfkss*yrfqyisnsnh*ninl*ke*ysygyitflsylwfn
vilnvdgetrsscccltki*ts*ilgvnskv*gcnfihcstscyhvckitnrr*i*slkf
tyti*wccsiefrg*rfn*rkiqrqtcn*trlwcyrt*sslfcnskwis*iwfrwypltq
sig*nhlsrdw*efryg*kg*nly*rskcyvgll*q*kgnq*shr*rwilknw*ywlrr*
rwlllyrr*ikgidqm*rfpstscriggitiisskscrclcsrsfkr*yg*stkrfrcy*
tk*isnrkrtlrlgpsknckl*tfqrwylfhtcns*icnr*tit*ks*rf**skiikf*k
kvlifhfdqqdfsn*fiyim*etkmptnkilryiikkkk


own update 2004. 6.23
Homology vs CSM-cDNA
Query= Contig-U15045-1 (Contig-U15045-1Q)
/CSM_Contig/Contig-U15045-1Q.Seq.d
(2101 letters)

Database: CSM
8402 sequences; 8,075,542 total letters


Score E
Sequences producing significant alignments: (bits) Value

Contig-U15045-1 (Contig-U15045-1Q) /CSM_Contig/Conti... 3443 0.0
Contig-U05803-1 (Contig-U05803-1Q) /CSM_Contig/Conti... 44 9e-04
Contig-U05485-1 (Contig-U05485-1Q) /CSM_Contig/Conti... 44 9e-04
Contig-U16038-1 (Contig-U16038-1Q) /CSM_Contig/Conti... 42 0.003
Contig-U11052-1 (Contig-U11052-1Q) /CSM_Contig/Conti... 42 0.003
Contig-U09446-1 (Contig-U09446-1Q) /CSM_Contig/Conti... 42 0.003
Contig-U05912-1 (Contig-U05912-1Q) /CSM_Contig/Conti... 42 0.003
Contig-U04592-1 (Contig-U04592-1Q) /CSM_Contig/Conti... 42 0.003
Contig-U01501-1 (Contig-U01501-1Q) /CSM_Contig/Conti... 42 0.003
Contig-U15813-1 (Contig-U15813-1Q) /CSM_Contig/Conti... 40 0.014

>Contig-U15045-1 (Contig-U15045-1Q) /CSM_Contig/Contig-U15045-1Q.Seq.d
Length = 2101

Score = 3443 bits (1737), Expect = 0.0
Identities = 1765/1779 (99%)
Strand = Plus / Plus


Query: 308 tttctaggatgattagaataattaatggacaaacttatttcgcatcaaaatacccaaata 367
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 tttctaggatgattagaataattaatggacaaacttatttcgcatcaaaatacccaaata 367


Query: 368 ttataataccagagaaactaatacctcaattaattttaaaacatattagatctaaacctg 427
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 ttataataccagagaaactaatacctcaattaattttaaaacatattagatctaaacctg 427


Query: 428 atcaagttttattagttgatggtttaacttttaaagaatattcttctcattttgtcgctg 487
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 atcaagttttattagttgatggtttaacttttaaagaatattcttctcattttgtcgctg 487


Query: 488 atacaattgaaaaggtcgcatgtggtttaaataaattaaatatnnnnnnnggtgatgtac 547
||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 488 atacaattgaaaaggtcgcatgtggtttaaataaattaaatataaaaaaaggtgatgtac 547


Query: 548 ttggagtaattctaccaaatttaccagaatatgtaccaatatttcatggtacattattga 607
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 548 ttggagtaattctaccaaatttaccagaatatgtaccaatatttcatggtacattattga 607


Query: 608 tgggaggcattacatcattagttaatccagactatacaattgaagagttatcacatacat 667
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 608 tgggaggcattacatcattagttaatccagactatacaattgaagagttatcacatacat 667


Query: 668 tagcaacagtttcaccaagatatttagcagtaacattagcagtatatgaaaagattaaaa 727
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 668 tagcaacagtttcaccaagatatttagcagtaacattagcagtatatgaaaagattaaaa 727


Query: 728 atgatttaaaaagagtttttccaagtgttgaaaaagtgattttagtcgatattgcaggtc 787
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 728 atgatttaaaaagagtttttccaagtgttgaaaaagtgattttagtcgatattgcaggtc 787


Query: 788 aaactttaaaagaaattgatcaattaactttatctagtgatggaattgtaatgtcattca 847
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 788 aaactttaaaagaaattgatcaattaactttatctagtgatggaattgtaatgtcattca 847


Query: 848 atcaactaattaataataatggtaaagattacccaatcgttagaattgacccaaagaaag 907
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 848 atcaactaattaataataatggtaaagattacccaatcgttagaattgacccaaagaaag 907


Query: 908 atacagctattattccattttcaagtggtacaactggattatttaaaggtgtttgtttaa 967
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 908 atacagctattattccattttcaagtggtacaactggattatttaaaggtgtttgtttaa 967


Query: 968 gtcatcataatatcgtttccaatacatatcaaactcaaaccattgaaacatcaacctata 1027
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 968 gtcatcataatatcgtttccaatacatatcaaactcaaaccattgaaacatcaacctata 1027


Query: 1028 aaaagaatgatacagttatgggtatattacctttctttcatatctatggtttaatgttat 1087
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1028 aaaagaatgatacagttatgggtatattacctttctttcatatctatggtttaatgttat 1087


Query: 1088 tcttaatgttgatggtgaaacaaggtcatcgtgttgttgtcttaccaaaatttgaaccag 1147
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1088 tcttaatgttgatggtgaaacaaggtcatcgtgttgttgtcttaccaaaatttgaaccag 1147


Query: 1148 ttagattcttggagttaattcaaaagtataaggttgcaatttcattcattgttccaccag 1207
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1148 ttagattcttggagttaattcaaaagtataaggttgcaatttcattcattgttccaccag 1207


Query: 1208 ttgctatcatgtttgcaaaatcaccaatcgtcgataaatttgatctctcaagtttacgta 1267
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1208 ttgctatcatgtttgcaaaatcaccaatcgtcgataaatttgatctctcaagtttacgta 1267


Query: 1268 cactatttagtggtgctgctccattgagttcagaggttgaagatttaattaaagaaagat 1327
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1268 cactatttagtggtgctgctccattgagttcagaggttgaagatttaattaaagaaagat 1327


Query: 1328 tcaaaggcagacttgtaattaaacaaggttatggtgctaccgaacttagtccagcctgtt 1387
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1328 tcaaaggcagacttgtaattaaacaaggttatggtgctaccgaacttagtccagcctgtt 1387


Query: 1388 ttgtaattccaagtggattagttaaatctggttccgctggtatcctcttacccaatcaat 1447
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1388 ttgtaattccaagtggattagttaaatctggttccgctggtatcctcttacccaatcaat 1447


Query: 1448 tggctaaaatcatctctccagagactggtgagaatttaggtatgggtgaaaagggtgaaa 1507
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1448 tggctaaaatcatctctccagagactggtgagaatttaggtatgggtgaaaagggtgaaa 1507


Query: 1508 tctgtattaaaggtccaaatgttatgttgggttattataacaatgaaaaggcaaccaatg 1567
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1508 tctgtattaaaggtccaaatgttatgttgggttattataacaatgaaaaggcaaccaatg 1567


Query: 1568 aagtcatagataaagatggattcttaaaaactggtgatattggttacgtcgatgaagatg 1627
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1568 aagtcatagataaagatggattcttaaaaactggtgatattggttacgtcgatgaagatg 1627


Query: 1628 gttattactttatcgtcgatagatcaaaggaattgatcaaatgtaaaggtttccaagtac 1687
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1628 gttattactttatcgtcgatagatcaaaggaattgatcaaatgtaaaggtttccaagtac 1687


Query: 1688 ctcctgccgaattggaggcattactattatctcatccaaaagttgcagatgcctgtgtag 1747
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1688 ctcctgccgaattggaggcattactattatctcatccaaaagttgcagatgcctgtgtag 1747


Query: 1748 taggtctttcaaaaggtgatatgggtgaagtaccaagaggtttcgttgttattaaacaaa 1807
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1748 taggtctttcaaaaggtgatatgggtgaagtaccaagaggtttcgttgttattaaacaaa 1807


Query: 1808 atgaatctctaaccgaaaaagaactcttagattgggcccatccaaaaattgcaaattata 1867
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1808 atgaatctctaaccgaaaaagaactcttagattgggcccatccaaaaattgcaaattata 1867


Query: 1868 aacatttcagaggtggtatctttttcatacctgcaattcctaaatctgcaaccggtaaac 1927
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1868 aacatttcagaggtggtatctttttcatacctgcaattcctaaatctgcaaccggtaaac 1927


Query: 1928 tattacgtaaaaatcttaaagattttaataatctaaaattataaaattttnnnnnnnggt 1987
|||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 1928 tattacgtaaaaatcttaaagattttaataatctaaaattataaaattttaaaaaaaggt 1987


Query: 1988 gttaattttccactttgaccaacaagatttttcaaattaatttatttatataatgtagga 2047
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1988 gttaattttccactttgaccaacaagatttttcaaattaatttatttatataatgtagga 2047


Query: 2048 aaccaaaatgccaacaaataaaattttaagatatatcat 2086
|||||||||||||||||||||||||||||||||||||||
Sbjct: 2048 aaccaaaatgccaacaaataaaattttaagatatatcat 2086


Score = 335 bits (169), Expect = 2e-91
Identities = 249/289 (86%)
Strand = Plus / Plus


Query: 1 ataaatgaagaaaggtatacnnnnnnnnncaccttttatcgataaaagccaaatactaaa 60
|||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 1 ataaatgaagaaaggtatacaaaaaaaaacaccttttatcgataaaagccaaatactaaa 60


Query: 61 taaaattaattaatgtggcgtaacataaaattaattaaaacaaacaaattaatatacttt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 taaaattaattaatgtggcgtaacataaaattaattaaaacaaacaaattaatatacttt 120


Query: 121 attannnnnnnnnnnnacgaggcaaaaaataaataattattatttttaacnnnnnnnnnn 180
|||| ||||||||||||||||||||||||||||||||||
Sbjct: 121 attattttttttttttacgaggcaaaaaataaataattattatttttaactttttttttt 180


Query: 181 aaacaccataccattttttaaaaaataaataattattatttttaacnnnnnnnnnattat 240
|||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 181 aaacaccataccattttttaaaaaataaataattattatttttaactttttttttattat 240


Query: 241 ttctttgttttccaaaattctcctaatttaagtttcgccattgtttatt 289
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ttctttgttttccaaaattctcctaatttaagtttcgccattgtttatt 289


Score = 32.2 bits (16), Expect = 3.3
Identities = 16/16 (100%)
Strand = Plus / Minus


Query: 33 cttttatcgataaaag 48
||||||||||||||||
Sbjct: 48 cttttatcgataaaag 33


>Contig-U05803-1 (Contig-U05803-1Q) /CSM_Contig/Contig-U05803-1Q.Seq.d
Length = 786

Score = 44.1 bits (22), Expect = 9e-04
Identities = 25/26 (96%)
Strand = Plus / Plus


Query: 49 ccaaatactaaataaaattaattaat 74
|||||| |||||||||||||||||||
Sbjct: 741 ccaaatcctaaataaaattaattaat 766


>Contig-U05485-1 (Contig-U05485-1Q) /CSM_Contig/Contig-U05485-1Q.Seq.d
Length = 173

Score = 44.1 bits (22), Expect = 9e-04
Identities = 22/22 (100%)
Strand = Plus / Minus


Query: 196 ttttaaaaaataaataattatt 217
||||||||||||||||||||||
Sbjct: 51 ttttaaaaaataaataattatt 30


Score = 36.2 bits (18), Expect = 0.21
Identities = 18/18 (100%)
Strand = Plus / Minus


Query: 144 aaaaaataaataattatt 161
||||||||||||||||||
Sbjct: 47 aaaaaataaataattatt 30


Database: CSM
Posted date: Jun 21, 2004 1:35 PM
Number of letters in database: 8,075,542
Number of sequences in database: 8402

Lambda K H
1.37 0.711 1.31

Gapped
Lambda K H
1.37 0.711 1.31


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 65,617
Number of Sequences: 8402
Number of extensions: 65617
Number of successful extensions: 10139
Number of sequences better than 10.0: 391
length of query: 2101
length of database: 8,075,542
effective HSP length: 17
effective length of query: 2084
effective length of database: 7,932,708
effective search space: 16531763472
effective search space used: 16531763472
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 16 (32.2 bits)
dna update 2009. 1.10
Homology vs DNA
Query= Contig-U15045-1 (Contig-U15045-1Q) /CSM_Contig/Contig-U15045-1Q.Seq.d
(2101 letters)

Database: ddbj_A
92,845,959 sequences; 95,242,211,685 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value N

(BJ371684) Dictyostelium discoideum cDNA clone:ddc1g02, 3' e... 1336 0.0 1
(BJ402749) Dictyostelium discoideum cDNA clone:dds17l20, 3' ... 1310 0.0 2
(C83857) Dictyostelium discoideum slug cDNA, clone SSA391. 1160 0.0 1
(BJ358332) Dictyostelium discoideum cDNA clone:ddc1g02, 5' e... 704 0.0 2
(C90519) Dictyostelium discoideum slug cDNA, clone SSI661. 644 0.0 3
(BJ347064) Dictyostelium discoideum cDNA clone:dda26b04, 3' ... 535 e-147 1
(AU073896) Dictyostelium discoideum slug cDNA, clone SSI661. 68 3e-11 2
(CJ402909) Molgula tectiformis cDNA, gonad clone:mtgd019c15,... 60 3e-07 2
(FF540376) MOPAE04TF MOP Vigna unguiculata cDNA 5', mRNA seq... 52 6e-06 2
(FG815603) UCRVU04_CCNI3071_g1 Cowpea 524B Mixed Tissue and ... 52 6e-06 2
(FF390721) MOOD355TF MOO Vigna unguiculata cDNA 5', mRNA seq... 52 6e-06 2
(FG824026) UCRVU04_CCNI8042_g1 Cowpea 524B Mixed Tissue and ... 52 6e-06 2
(FG847748) UCRVU05_CCNN15328_g1 Cowpea IT84S-2049 Mixed Tiss... 52 6e-06 2
(CT438947) Sus scrofa genomic clone CH242-404K13, genomic su... 42 9e-05 3
(AW719487) LjNEST5a10r Lotus japonicus nodule library, matur... 48 9e-05 2
(AF008183) Populus x generosa strain H11 4-coumarate:CoA lig... 44 0.001 2
(AC116979) Dictyostelium discoideum chromosome 2 map 6445720... 36 0.001 19
(EY259067) BF01031A2D02.f1 Normalized subtracted keck librar... 50 0.003 2
(CP000685) Flavobacterium johnsoniae UW101, complete genome. 40 0.011 20
(FE234359) CAPG2779.fwd CAPG Naegleria gruberi amoeba stage ... 54 0.012 2
(FD782027) 03PA2_T7_031_A12_08AUG2005_096 03PA2 Phaseolus an... 52 0.019 2
(DX525562) GH_MBb0040A24r GH_MBb Gossypium hirsutum genomic ... 38 0.030 3
(FD783839) 04ANAA3_T7_026_A03_23FEB2006_031 04ANAA3 Phaseolu... 52 0.033 2
(CF887753) UI-CF-FN0-afy-c-13-18-UI.r18 UI-CF-FN0 Homo sapie... 36 0.036 3
(FD782951) 04ANAA3_T7_015_D01_22FEB2006_009 04ANAA3 Phaseolu... 52 0.037 2
(CF891586) UI-CF-FN0-afy-c-13-18-UI.s18 UI-CF-FN0 Homo sapie... 36 0.037 3
(FD784546) 04ANAA3_T7_034_D12_24FEB2006_090 04ANAA3 Phaseolu... 52 0.039 2
(AC179266) Strongylocentrotus purpuratus clone R3-42P23, WOR... 36 0.051 11
(EK354403) 1095468426890 Global-Ocean-Sampling_GS-31-01-01-1... 46 0.067 3
(BM732657) sal79h11.y1 Gm-c1061 Glycine max cDNA clone SOYBE... 52 0.088 1
(BM528360) sal57d08.y1 Gm-c1061 Glycine max cDNA clone SOYBE... 52 0.088 1
(BE555239) sp87a10.y1 Gm-c1045 Glycine max cDNA clone GENOME... 52 0.088 1
(FK005007) GLMDJ77TR JCVI-SOY2 Glycine max cDNA 5', mRNA seq... 52 0.088 1
(FK005006) GLMDJ77TFB JCVI-SOY2 Glycine max cDNA 5', mRNA se... 52 0.088 1
(FC459805) UCRVU09_CCNT411_b1 Cowpea UCR 707 Mixed Tissue an... 52 0.088 1
(EV264649) GLLAL05TF JCVI-SOY1 Glycine max cDNA 5', mRNA seq... 52 0.088 1
(CU475568) Medicago truncatula chromosome 5 clone mth2-61f16... 36 0.12 10
(AC115684) Dictyostelium discoideum chromosome 2 map 3108975... 36 0.12 11
(AC176343) Strongylocentrotus purpuratus clone R3-3054A19, W... 38 0.15 6
(AC115612) Dictyostelium discoideum chromosome 2 map 6245135... 36 0.15 11
(CP000123) Mycoplasma capricolum subsp. capricolum ATCC 2734... 32 0.21 19
(AC005139) Plasmodium falciparum chromosome 12, *** SEQUENCI... 38 0.25 13
(EJ594751) 1092961073324 Global-Ocean-Sampling_GS-29-01-01-1... 40 0.26 2
(BA000016) Clostridium perfringens str. 13 DNA, complete gen... 36 0.30 20
(AF250284) Amsacta moorei entomopoxvirus, complete genome. 34 0.31 15
(L27325) Aleurodaphis blumeae mitochondrial cytochrome oxida... 38 0.33 4
(AC161811) Mus musculus chromosome 5, clone RP23-456E9, comp... 50 0.35 1
(AM482634) Vitis vinifera, whole genome shotgun sequence, co... 50 0.35 1
(ER629170) 1093018401251 Global-Ocean-Sampling_GS-36-01-01-2... 50 0.35 1
(ER486373) 1093015301415 Global-Ocean-Sampling_GS-35-01-01-1... 50 0.35 1
(ER477447) 1093015245914 Global-Ocean-Sampling_GS-35-01-01-1... 50 0.35 1
(EJ603980) 1092961216309 Global-Ocean-Sampling_GS-29-01-01-1... 50 0.35 1
(DE393043) Bombyx mori genomic DNA, BAC clone:14K11A. 50 0.35 1
(L36900) Saccharomyces cerevisiae mitochondrion transfer RNA... 38 0.35 4
(AM285307) Spiroplasma citri GII3-3X chromosome, contig Cont... 36 0.41 6
(DX483756) Cpl25454 Papaya Genomic DNA BAC Library Carica pa... 44 0.43 2
(DX483739) Cpl25437 Papaya Genomic DNA BAC Library Carica pa... 44 0.43 2
(AE015929) Staphylococcus epidermidis ATCC 12228, complete g... 34 0.49 21
(BZ155406) CH230-442B13.TJ CHORI-230 Segment 2 Rattus norveg... 40 0.57 2
(CR548612) Paramecium tetraurelia macronuclear largest chrom... 32 0.58 22
(EJ062164) 1095458003178 Global-Ocean-Sampling_GS-26-01-01-1... 48 0.66 2
(AC116963) Dictyostelium discoideum chromosome 2 map 4657875... 40 0.70 13
(EJ069492) 1095458072744 Global-Ocean-Sampling_GS-26-01-01-1... 48 0.72 2
(BX571774) Zebrafish DNA sequence from clone DKEY-250A19 in ... 34 0.75 2
(AM436113) Vitis vinifera contig VV78X033734.11, whole genom... 40 0.81 4
(AL445565) Mycoplasma pulmonis (strain UAB CTIP) complete ge... 36 0.85 16
(AC115599) Dictyostelium discoideum chromosome 2 map 4229098... 36 0.94 10
(CF201894) RR890915N0004_IIa_Ra_C01 Vitis sp. RR890915N Viti... 34 0.96 2
(DY666326) SA_CP_06_H11 SA_CP Senecio aethnensis cDNA 5', mR... 36 0.98 2
(AM448414) Vitis vinifera contig VV78X090180.1, whole genome... 34 1.0 4
(AC116984) Dictyostelium discoideum chromosome 2 map 2567470... 36 1.1 12
(AE009951) Fusobacterium nucleatum subsp. nucleatum ATCC 255... 36 1.2 20
(AC209234) Homo sapiens FOSMID clone ABC9-44043600B8 from ch... 48 1.2 4
(J01462) Yeast (S.cerevisiae) mitochondrial Ser-tRNA and ATP... 38 1.3 5
(CR628406) Zebrafish DNA sequence from clone CH211-146A2 in ... 48 1.4 1
(BX511196) Zebrafish DNA sequence from clone RP71-14I8 in li... 48 1.4 1
(AC012155) Homo sapiens 6 BAC RP11-114J19 (Roswell Park Canc... 48 1.4 1
(AC133443) Rattus norvegicus clone CH230-165E9, *** SEQUENCI... 48 1.4 1
(AC096210) Rattus norvegicus clone CH230-33O3, *** SEQUENCIN... 48 1.4 1
(AC178426) Strongylocentrotus purpuratus clone R3-3113M16, W... 48 1.4 1
(AC023504) Homo sapiens chromosome 3 clone RP11-22D22, WORKI... 48 1.4 1
(AQ224337) HS_2258_B2_C05_T7 CIT Approved Human Genomic Sper... 48 1.4 1
(DV618376) EST1221372 Glossina morsitans morsitans Fat body ... 48 1.4 1
(CN949548) 000530AYFB001898HT (AYFB) Royal Gala 10 DAFB frui... 48 1.4 1
(BX567696) Glossina morsitans morsitans (Tseatse fly) EST fr... 48 1.4 1
(EV832732) TT1DF31TV Tetrahymena thermophila SB210 cDNA libr... 48 1.4 1
(CP000061) Aster yellows witches'-broom phytoplasma AYWB, co... 48 1.4 1
(AG341524) Mus musculus molossinus DNA, clone:MSMg01-134O22.... 38 1.4 3
(AE014816) Plasmodium falciparum 3D7 chromosome 14 section 1... 36 1.6 15
(AC115606) Dictyostelium discoideum chromosome 2 map 159760-... 32 1.7 9
(CP000246) Clostridium perfringens ATCC 13124, complete genome. 36 1.7 20
(AE014842) Plasmodium falciparum 3D7 chromosome 11 section 7... 34 1.8 14
(CZ425503) 1021206 RP42 Bos taurus genomic clone RP42-89E08,... 42 1.9 2
(BX649363) Zebrafish DNA sequence from clone CH211-13C3 in l... 40 1.9 6
(AF376800) Plasmodium falciparum myosin D gene, complete cds. 32 2.0 4
(EK333463) 1095467032754 Global-Ocean-Sampling_GS-31-01-01-1... 32 2.1 3
(DX471985) Cpl14056 Papaya Genomic DNA BAC Library Carica pa... 36 2.2 2
(ER614891) 1093016345181 Global-Ocean-Sampling_GS-36-01-01-2... 46 2.3 2
(EJ746884) 1092963003781 Global-Ocean-Sampling_GS-30-02-01-1... 46 2.4 2
(EJ660787) 1092955022693 Global-Ocean-Sampling_GS-30-02-01-1... 46 2.4 2

>(BJ371684) Dictyostelium discoideum cDNA clone:ddc1g02, 3' end,
single read.
Length = 699

Score = 1336 bits (674), Expect = 0.0
Identities = 674/674 (100%)
Strand = Plus / Minus


Query: 1261 ttacgtacactatttagtggtgctgctccattgagttcagaggttgaagatttaattaaa 1320
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 699 ttacgtacactatttagtggtgctgctccattgagttcagaggttgaagatttaattaaa 640


Query: 1321 gaaagattcaaaggcagacttgtaattaaacaaggttatggtgctaccgaacttagtcca 1380
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 639 gaaagattcaaaggcagacttgtaattaaacaaggttatggtgctaccgaacttagtcca 580


Query: 1381 gcctgttttgtaattccaagtggattagttaaatctggttccgctggtatcctcttaccc 1440
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 579 gcctgttttgtaattccaagtggattagttaaatctggttccgctggtatcctcttaccc 520


Query: 1441 aatcaattggctaaaatcatctctccagagactggtgagaatttaggtatgggtgaaaag 1500
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 519 aatcaattggctaaaatcatctctccagagactggtgagaatttaggtatgggtgaaaag 460


Query: 1501 ggtgaaatctgtattaaaggtccaaatgttatgttgggttattataacaatgaaaaggca 1560
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 459 ggtgaaatctgtattaaaggtccaaatgttatgttgggttattataacaatgaaaaggca 400


Query: 1561 accaatgaagtcatagataaagatggattcttaaaaactggtgatattggttacgtcgat 1620
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 399 accaatgaagtcatagataaagatggattcttaaaaactggtgatattggttacgtcgat 340


Query: 1621 gaagatggttattactttatcgtcgatagatcaaaggaattgatcaaatgtaaaggtttc 1680
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 339 gaagatggttattactttatcgtcgatagatcaaaggaattgatcaaatgtaaaggtttc 280


Query: 1681 caagtacctcctgccgaattggaggcattactattatctcatccaaaagttgcagatgcc 1740
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 279 caagtacctcctgccgaattggaggcattactattatctcatccaaaagttgcagatgcc 220


Query: 1741 tgtgtagtaggtctttcaaaaggtgatatgggtgaagtaccaagaggtttcgttgttatt 1800
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 219 tgtgtagtaggtctttcaaaaggtgatatgggtgaagtaccaagaggtttcgttgttatt 160


Query: 1801 aaacaaaatgaatctctaaccgaaaaagaactcttagattgggcccatccaaaaattgca 1860
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 159 aaacaaaatgaatctctaaccgaaaaagaactcttagattgggcccatccaaaaattgca 100


Query: 1861 aattataaacatttcagaggtggtatctttttcatacctgcaattcctaaatctgcaacc 1920
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 99 aattataaacatttcagaggtggtatctttttcatacctgcaattcctaaatctgcaacc 40


Query: 1921 ggtaaactattacg 1934
||||||||||||||
Sbjct: 39 ggtaaactattacg 26

Lambda K H
1.37 0.711 1.31

Matrix: blastn matrix:1 -3
Number of Sequences: 92845959
Number of Hits to DB: 2,291,418,614
Number of extensions: 141739567
Number of successful extensions: 12942963
Number of sequences better than 10.0: 235
Length of query: 2101
Length of database: 95,242,211,685
Length adjustment: 24
Effective length of query: 2077
Effective length of database: 97,308,875,965
Effective search space: 202110535379305
Effective search space used: 202110535379305
X1: 11 (21.8 bits)
S2: 23 (46.1 bits)

protein update 2009. 7.13
Homology vs Protein
Query= Contig-U15045-1 (Contig-U15045-1Q) /CSM_Contig/Contig-U15045-1Q.Seq.d
(2101 letters)

Database: nrp_B
3,236,559 sequences; 1,051,180,864 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value

(Q54P77) RecName: Full=Probable 4-coumarate--CoA ligase 1; ... 1050 0.0
(Q54P78) RecName: Full=Probable 4-coumarate--CoA ligase 2; ... 1015 0.0
(Q54P79) RecName: Full=Probable 4-coumarate--CoA ligase 3; ... 1006 0.0
EU180602_1(EU180602|pid:none) Physcomitrella patens subsp. magda... 361 7e-98
(O24145) RecName: Full=4-coumarate--CoA ligase 1; Short... 361 7e-98
FJ230968_1(FJ230968|pid:none) Paulownia fortunei 4-coumarate coe... 359 2e-97
EU167552_1(EU167552|pid:none) Physcomitrella patens subsp. paten... 358 3e-97
EU167555_1(EU167555|pid:none) Physcomitrella patens subsp. paten... 358 4e-97
EU180599_1(EU180599|pid:none) Physcomitrella patens subsp. magda... 358 6e-97
DQ076679_1(DQ076679|pid:none) Populus tomentosa 4-coumarate:CoA ... 357 1e-96
EU616540_1(EU616540|pid:none) Capsicum annuum putative 4-coumara... 357 1e-96
AF008183_1(AF008183|pid:none) Populus x generosa strain H11 4-co... 357 1e-96
AY792353_1(AY792353|pid:none) Betula platyphylla 4-coumarate:CoA... 356 2e-96
(P31684) RecName: Full=4-coumarate--CoA ligase 1; Short... 355 3e-96
(O24146) RecName: Full=4-coumarate--CoA ligase 2; Short... 355 4e-96
EU603299_1(EU603299|pid:none) Populus trichocarpa isolate 4CL5 4... 353 1e-95
EU167553_1(EU167553|pid:none) Physcomitrella patens subsp. paten... 353 2e-95
(O24540) RecName: Full=4-coumarate--CoA ligase; Short=4... 352 3e-95
AC144503_4(AC144503|pid:none) Medicago truncatula clone mth2-13f... 352 3e-95
(P14913) RecName: Full=4-coumarate--CoA ligase 1; Short... 351 5e-95
AF041049_1(AF041049|pid:none) Populus tremuloides clone Pt4CL1 4... 351 5e-95
EU179313_1(EU179313|pid:none) Physcomitrella patens subsp. calif... 351 7e-95
EU179314_1(EU179314|pid:none) Physcomitrella patens subsp. calif... 350 1e-94
(P14912) RecName: Full=4-coumarate--CoA ligase 1; Short... 350 1e-94
CU458896_4026(CU458896|pid:none) Mycobacterium abscessus chromos... 350 2e-94
D43773_1(D43773|pid:none) Nicotiana tabacum mRNA for 4-coumarate... 349 3e-94
EU180601_1(EU180601|pid:none) Physcomitrella patens subsp. magda... 348 3e-94
AY541033_1(AY541033|pid:none) Allium cepa 4-coumaroyl-coenzyme A... 348 3e-94
AF002259_1(AF002259|pid:none) Glycine max 4-coumarate:CoA ligase... 348 4e-94
AB469557_1(AB469557|pid:none) Ipomoea batatas Ib4CL mRNA for 4-c... 345 4e-93
AF283553_1(AF283553|pid:none) Populus balsamifera subsp. trichoc... 344 8e-93
AM428701_1(AM428701|pid:none) Vitis vinifera contig VV78X247793.... 343 1e-92
FJ810495_1(FJ810495|pid:none) Pinus massoniana 4-coumarate:CoA l... 343 2e-92
AM887578_1(AM887578|pid:none) Arabidopsis thaliana 4CL2 gene for... 341 5e-92
T09755(T09755) 4-coumarate-CoA ligase (EC 6.2.1.12) 4CL2 - loblo... 341 7e-92
AF212317_1(AF212317|pid:none) Capsicum annuum 4-coumarate:coenzy... 340 1e-91
D49367_1(D49367|pid:none) Lithospermum erythrorhizon mRNA for 4-... 340 2e-91
AF041050_1(AF041050|pid:none) Populus tremuloides clone Pt4CL2 4... 340 2e-91
AM887584_1(AM887584|pid:none) Arabidopsis thaliana 4CL2 gene for... 340 2e-91
AB166768_1(AB166768|pid:none) Scutellaria baicalensis Sb4CL2 mRN... 339 3e-91
AM887595_1(AM887595|pid:none) Arabidopsis lyrata 4CL2 gene for 4... 339 3e-91
(Q9S725) RecName: Full=4-coumarate--CoA ligase 2; Short... 338 4e-91
AF435968_1(AF435968|pid:none) Amorpha fruticosa 4-coumarate:CoA ... 338 4e-91
AM887594_1(AM887594|pid:none) Arabidopsis lyrata 4CL2 gene for 4... 338 6e-91
AB166767_1(AB166767|pid:none) Scutellaria baicalensis Sb4CL1 mRN... 338 6e-91
(P41636) RecName: Full=4-coumarate--CoA ligase; Short=4... 338 6e-91
DQ400697_1(DQ400697|pid:none) Arnebia euchroma 4-coumarate:CoA l... 337 8e-91
AF106085_1(AF106085|pid:none) Arabidopsis thaliana 4-coumarate:C... 336 2e-90
AB098616_1(AB098616|pid:none) Tenebrio molitor tm-llg2 mRNA for ... 335 3e-90
D49366_1(D49366|pid:none) Lithospermum erythrorhizon mRNA for 4-... 335 3e-90
CP000031_781(CP000031|pid:none) Ruegeria pomeroyi DSS-3, complet... 335 5e-90
CP000656_4223(CP000656|pid:none) Mycobacterium gilvum PYR-GCK, c... 334 7e-90
AM887552_1(AM887552|pid:none) Arabidopsis lyrata partial 4CL1 ge... 333 1e-89
AP008957_1619(AP008957|pid:none) Rhodococcus erythropolis PR4 DN... 333 1e-89
DQ194356_1(DQ194356|pid:none) Camellia sinensis cultivar UPASI-1... 333 1e-89
EF678230_1(EF678230|pid:none) Picea sitchensis clone WS0285_N20 ... 332 4e-89
AY163489_1(AY163489|pid:none) Nicotiana sylvestris 4-coumarate:C... 331 6e-89
EU224389_1(EU224389|pid:none) Ruta graveolens 4-coumarate:CoA li... 330 2e-88
(Q42982) RecName: Full=Probable 4-coumarate--CoA ligase 2; ... 330 2e-88
CP000431_5273(CP000431|pid:none) Rhodococcus jostii RHA1, comple... 328 5e-88
FJ205491_1(FJ205491|pid:none) Leucaena leucocephala 4-coumarate ... 328 6e-88
AE014297_3614(AE014297|pid:none) Drosophila melanogaster chromos... 327 8e-88
AM887537_1(AM887537|pid:none) Arabidopsis thaliana partial 4CL1 ... 327 8e-88
CP000431_2042(CP000431|pid:none) Rhodococcus jostii RHA1, comple... 327 8e-88
CP000580_1834(CP000580|pid:none) Mycobacterium sp. JLS, complete... 327 1e-87
CP000830_253(CP000830|pid:none) Dinoroseobacter shibae DFL 12, c... 327 1e-87
(Q9LU36) RecName: Full=4-coumarate--CoA ligase 4; Short... 326 2e-87
EU196764_1(EU196764|pid:none) Ruta graveolens 4-coumarate CoA li... 326 2e-87
AF052221_1(AF052221|pid:none) Lolium perenne 4-coumarate--CoA li... 325 4e-87
AM887547_1(AM887547|pid:none) Arabidopsis thaliana partial 4CL1 ... 325 4e-87
CP000511_2074(CP000511|pid:none) Mycobacterium vanbaalenii PYR-1... 324 7e-87
AM887542_1(AM887542|pid:none) Arabidopsis thaliana partial 4CL1 ... 323 2e-86
CP000264_1151(CP000264|pid:none) Jannaschia sp. CCS1, complete g... 322 4e-86
CP000480_2280(CP000480|pid:none) Mycobacterium smegmatis str. MC... 322 4e-86
AB098617_1(AB098617|pid:none) Tenebrio molitor tm-llg3 mRNA for ... 321 6e-86
AY566301_1(AY566301|pid:none) Zea mays 4-coumarate coenzyme A li... 320 2e-85
(Q6ETN3) RecName: Full=Probable 4-coumarate--CoA ligase 3; ... 320 2e-85
AF052222_1(AF052222|pid:none) Lolium perenne 4-coumarate--CoA li... 318 5e-85
(Q67W82) RecName: Full=Probable 4-coumarate--CoA ligase 4; ... 318 5e-85
AP011115_1743(AP011115|pid:none) Rhodococcus opacus B4 DNA, comp... 318 6e-85
CP000432_968(CP000432|pid:none) Rhodococcus jostii RHA1 plasmid ... 318 6e-85
L43362_1(L43362|pid:none) Oryza sativa 4-coumarate:CoA ligase is... 317 8e-85
AB098615_1(AB098615|pid:none) Tenebrio molitor tm-llg1 mRNA for ... 315 4e-84
CR931997_484(CR931997|pid:none) Corynebacterium jeikeium K411 co... 315 5e-84
T20741(T20741) hypothetical protein F11A3.1 - Caenorhabditis ele... 313 1e-83
FJ205490_1(FJ205490|pid:none) Leucaena leucocephala 4-coumarate ... 313 2e-83
EU491511_1(EU491511|pid:none) Panicum virgatum 4-coumarate coenz... 312 3e-83
(Q9LQ12) RecName: Full=4-coumarate--CoA ligase-like 1; ... 311 6e-83
AP007171_528(AP007171|pid:none) Aspergillus oryzae RIB40 genomic... 311 8e-83
AB353886_1(AB353886|pid:none) Agrypnus binodulus binodulus AbLL ... 308 4e-82
AE017356_155(AE017356|pid:none) Cryptococcus neoformans var. neo... 307 9e-82
AB255748_1(AB255748|pid:none) Rhagophthalmus ohbai ROLuc-WT gene... 307 9e-82
AB255749_1(AB255749|pid:none) Synthetic construct ROLuc-Mutant g... 307 9e-82
AF052223_1(AF052223|pid:none) Lolium perenne 4-coumarate--CoA li... 305 4e-81
EF155570_1(EF155570|pid:none) Pyrocoelia pectoralis luciferase m... 304 7e-81
AY447202_1(AY447202|pid:none) Pyrocoelia rufa luciferase gene, c... 304 7e-81
DQ408300_1(DQ408300|pid:none) Diaphanes pectinealis luciferase g... 303 1e-80
AP009493_3091(AP009493|pid:none) Streptomyces griseus subsp. gri... 303 1e-80
L39928_1(L39928|pid:none) Pyrocoelia miyako (clone pB-PmL41) luc... 303 2e-80
AF239685_1(AF239685|pid:none) Rubus idaeus 4-coumarate:coA ligas... 303 2e-80
EU753858_1(EU753858|pid:none) Retroviral expression vector L149,... 301 5e-80
AB037684_3(AB037684|pid:none) Cloning vector pPLuc, complete seq... 301 5e-80
EF426459_1(EF426459|pid:none) Binary gene-trap vector piGL, comp... 301 5e-80
AY535007_2(AY535007|pid:none) RNA interference vector psiCHECK(T... 301 5e-80
AY738224_1(AY738224|pid:none) Firefly luciferase reporter vector... 301 5e-80
AF416988_1(AF416988|pid:none) Synthetic construct plasmid pTRE_P... 301 5e-80
AY738223_1(AY738223|pid:none) Firefly luciferase reporter vector... 301 5e-80
AF338825_1(AF338825|pid:none) Cloning vector pHLH/int(+), comple... 301 5e-80
AY487821_1(AY487821|pid:none) Reporter vector pGL3(R2.1), comple... 301 5e-80
AF416989_1(AF416989|pid:none) Synthetic construct plasmid pTRE_h... 301 5e-80
CS323168_1(CS323168|pid:none) Sequence 1 from Patent WO2006058900. 301 5e-80
AX615141_1(AX615141|pid:none) Sequence 1 from Patent EP1262553. 301 5e-80
AF041426_1(AF041426|pid:none) Cloning vector pVLH-1, complete se... 301 5e-80
CS055385_1(CS055385|pid:none) Sequence 5 from Patent WO2005024422. 301 5e-80
AB190814_1(AB190814|pid:none) Synthetic construct lucCP gene for... 301 5e-80
(P08659) RecName: Full=Luciferin 4-monooxygenase; Short... 301 8e-80
CP000141_1683(CP000141|pid:none) Carboxydothermus hydrogenoforma... 301 8e-80
AY633557_1(AY633557|pid:none) Cratomorphus distinctus luciferase... 301 8e-80
AF043450_2(AF043450|pid:none) Reporter vector p2luc, complete se... 301 8e-80
(Q26304) RecName: Full=Luciferin 4-monooxygenase; Short... 300 1e-79
X84846_1(X84846|pid:none) P.pyralis luc gene in Autographa calif... 300 1e-79
AL939119_261(AL939119|pid:none) Streptomyces coelicolor A3(2) co... 300 1e-79
EU196763_1(EU196763|pid:none) Ruta graveolens 4-coumarate CoA li... 300 1e-79
AY742225_1(AY742225|pid:none) Lampyris turkestanicus luciferase ... 300 1e-79
AM439400_1(AM439400|pid:none) Vitis vinifera contig VV78X094363.... 300 1e-79
AM942444_1748(AM942444|pid:none) Corynebacterium urealyticum DSM... 300 2e-79
AB196456_1(AB196456|pid:none) Luciola cruciata mRNA for hypothet... 296 2e-78
AX074306_1(AX074306|pid:none) Sequence 20 from Patent WO0104310. 296 2e-78
(Q01158) RecName: Full=Luciferin 4-monooxygenase; Short... 296 3e-78
EF678429_1(EF678429|pid:none) Picea sitchensis clone WS02920_J13... 296 3e-78
BT066156_1(BT066156|pid:none) Zea mays full-length cDNA clone ZM... 295 4e-78
AY192561_1(AY192561|pid:none) Luciola lateralis luciferase type ... 295 4e-78
BT055494_1(BT055494|pid:none) Zea mays full-length cDNA clone ZM... 295 4e-78
AF486801_1(AF486801|pid:none) Hotaria tsushimana isolate T2 luci... 295 6e-78
EU966506_1(EU966506|pid:none) Zea mays clone 294935 4-coumarate-... 295 6e-78
X84847_1(X84847|pid:none) P.pyralis luc gene in Autographa calif... 294 8e-78
CP000141_426(CP000141|pid:none) Carboxydothermus hydrogenoforman... 294 1e-77
(Q7XXL2) RecName: Full=4-coumarate--CoA ligase-like 9; ... 294 1e-77
AY181996_1(AY181996|pid:none) Luciola lateralis luciferase gene,... 293 1e-77
AY575768_1(AY575768|pid:none) Populus tomentosa 4-coumarate:CoA ... 293 1e-77
L39929_1(L39929|pid:none) Hotaria parvula (clone pB-Hp) lucifera... 293 2e-77
AM942444_1475(AM942444|pid:none) Corynebacterium urealyticum DSM... 291 8e-77
CP001638_2381(CP001638|pid:none) Geobacillus sp. WCH70, complete... 290 2e-76
AF543368_1(AF543368|pid:none) Pyrophorus plagiophthalamus Ppl-E1... 288 7e-76
BA000004_3103(BA000004|pid:none) Bacillus halodurans C-125 DNA, ... 287 9e-76
CP001177_4456(CP001177|pid:none) Bacillus cereus AH187, complete... 287 9e-76
CP000227_4231(CP000227|pid:none) Bacillus cereus Q1, complete ge... 287 1e-75
AM920436_2065(AM920436|pid:none) Penicillium chrysogenum Wiscons... 287 1e-75
AF543369_1(AF543369|pid:none) Pyrophorus plagiophthalamus Ppl-E1... 287 1e-75
AE016879_4397(AE016879|pid:none) Bacillus anthracis str. Ames, c... 286 2e-75
CP001215_4629(CP001215|pid:none) Bacillus anthracis str. CDC 684... 286 2e-75
EU302126_1(EU302126|pid:none) Luciola terminalis luciferase mRNA... 286 2e-75
AF543388_1(AF543388|pid:none) Pyrophorus plagiophthalamus Ppl-K1... 286 2e-75
D25416_1(D25416|pid:none) Firefly mRNA for luciferase, complete ... 286 2e-75
AF543378_1(AF543378|pid:none) Pyrophorus plagiophthalamus Ppl-E1... 286 2e-75
AF543382_1(AF543382|pid:none) Pyrophorus plagiophthalamus Ppl-E1... 285 4e-75
CP000612_2914(CP000612|pid:none) Desulfotomaculum reducens MI-1,... 285 5e-75
S29354(S29354)Photinus-luciferin 4-monooxygenase (ATP-hydrolysin... 285 5e-75
CP001176_4466(CP001176|pid:none) Bacillus cereus B4264, complete... 285 5e-75
AE017194_4618(AE017194|pid:none) Bacillus cereus ATCC 10987, com... 285 5e-75
AF543379_1(AF543379|pid:none) Pyrophorus plagiophthalamus Ppl-E1... 285 5e-75
AF543380_1(AF543380|pid:none) Pyrophorus plagiophthalamus Ppl-E1... 285 6e-75
(P17814) RecName: Full=Probable 4-coumarate--CoA ligase 1; ... 285 6e-75
AF543381_1(AF543381|pid:none) Pyrophorus plagiophthalamus Ppl-E1... 285 6e-75
D25415_1(D25415|pid:none) Firefly mRNA for luciferase, complete ... 284 8e-75
CP000903_4244(CP000903|pid:none) Bacillus weihenstephanensis KBA... 282 4e-74
CP000764_3070(CP000764|pid:none) Bacillus cereus subsp. cytotoxi... 282 4e-74
CP000922_561(CP000922|pid:none) Anoxybacillus flavithermus WK1, ... 282 4e-74
AF543406_1(AF543406|pid:none) Pyrophorus plagiophthalamus Ppl-E9... 282 4e-74
CP000141_1679(CP000141|pid:none) Carboxydothermus hydrogenoforma... 282 4e-74
GM773386_1(GM773386|pid:none) Sequence 1 from Patent EP1978091. ... 281 5e-74
CP000557_2575(CP000557|pid:none) Geobacillus thermodenitrificans... 281 5e-74
AF139645_1(AF139645|pid:none) Phrixothrix hirtus red-bioluminesc... 281 9e-74
CP000813_2475(CP000813|pid:none) Bacillus pumilus SAFR-032, comp... 280 1e-73
BA000043_2690(BA000043|pid:none) Geobacillus kaustophilus HTA426... 280 2e-73
AF543404_1(AF543404|pid:none) Pyrophorus plagiophthalamus Ppl-E7... 279 3e-73
AY258593_1(AY258593|pid:none) Luciferase reporter vector pCBG68-... 279 3e-73
AF543412_1(AF543412|pid:none) Pyrophorus plagiophthalamus Ppl-E6... 278 4e-73
AF543398_1(AF543398|pid:none) Pyrophorus plagiophthalamus Ppl-E1... 278 4e-73
AF543415_1(AF543415|pid:none) Pyrophorus plagiophthalamus Ppl-K4... 278 4e-73
AY447204_1(AY447204|pid:none) Lampyris noctiluca luciferase gene... 277 1e-72
AF543400_1(AF543400|pid:none) Pyrophorus plagiophthalamus Ppl-E7... 277 1e-72
AF545854_1(AF545854|pid:none) Pyrophorus mellifluus Pme-dGR luci... 277 1e-72
AE016877_4325(AE016877|pid:none) Bacillus cereus ATCC 14579, com... 276 2e-72
EU956613_1(EU956613|pid:none) Zea mays clone 1568159 4-coumarate... 275 5e-72
(Q84P21) RecName: Full=4-coumarate--CoA ligase-like 5; ... 275 6e-72
AY250838_1(AY250838|pid:none) Arabidopsis thaliana 4-coumarate-C... 275 6e-72
AY250833_1(AY250833|pid:none) Arabidopsis thaliana 4-coumarate-C... 274 8e-72
(P0C5B6) RecName: Full=4-coumarate--CoA ligase-like 4; ... 273 1e-71
(Q0DV32) RecName: Full=4-coumarate--CoA ligase-like 1; ... 272 3e-71
EF685345_1(EF685345|pid:none) Eriobotrya japonica 4-coumarate co... 272 3e-71
AC027665_18(AC027665|pid:none) Genomic sequence for Arabidopsis ... 271 7e-71
AM466875_4(AM466875|pid:none) Vitis vinifera contig VV78X252678.... 271 7e-71
CP000804_1737(CP000804|pid:none) Roseiflexus castenholzii DSM 13... 271 7e-71
BA000004_3104(BA000004|pid:none) Bacillus halodurans C-125 DNA, ... 270 2e-70
CP000561_825(CP000561|pid:none) Pyrobaculum calidifontis JCM 115... 269 3e-70
AP008955_1667(AP008955|pid:none) Brevibacillus brevis NBRC 10059... 268 6e-70
EU693492_1(EU693492|pid:none) Cloning vector pGloSensor-10F, com... 267 1e-69
CP001322_2296(CP001322|pid:none) Desulfatibacillum alkenivorans ... 266 2e-69
AP008210_450(AP008210|pid:none) Oryza sativa (japonica cultivar-... 266 2e-69
AM942444_1372(AM942444|pid:none) Corynebacterium urealyticum DSM... 266 2e-69
BX294019_8(BX294019|pid:none) Neurospora crassa DNA linkage grou... 265 4e-69
CP001087_4709(CP001087|pid:none) Desulfobacterium autotrophicum ... 265 5e-69
CP000560_2472(CP000560|pid:none) Bacillus amyloliquefaciens FZB4... 265 5e-69
BT042746_1(BT042746|pid:none) Zea mays full-length cDNA clone ZM... 265 6e-69
AM477084_3(AM477084|pid:none) Vitis vinifera contig VV78X050214.... 264 8e-69
AY250832_1(AY250832|pid:none) Arabidopsis thaliana 4-coumarate-C... 264 1e-68
CP001364_1148(CP001364|pid:none) Chloroflexus sp. Y-400-fl, comp... 263 1e-68
CP000909_1046(CP000909|pid:none) Chloroflexus aurantiacus J-10-f... 263 1e-68
AE000782_1016(AE000782|pid:none) Archaeoglobus fulgidus DSM 4304... 263 1e-68
(Q84P26) RecName: Full=4-coumarate--CoA ligase-like 8; ... 263 1e-68
CP000141_824(CP000141|pid:none) Carboxydothermus hydrogenoforman... 263 2e-68
CP001087_1354(CP001087|pid:none) Desulfobacterium autotrophicum ... 262 4e-68
AY250835_1(AY250835|pid:none) Arabidopsis thaliana 4-coumarate-C... 261 5e-68
AY250834_1(AY250834|pid:none) Arabidopsis thaliana 4-coumarate-C... 261 5e-68
DQ840569_1(DQ840569|pid:none) Hibiscus cannabinus 4-coumarate:Co... 261 7e-68
AE017221_1093(AE017221|pid:none) Thermus thermophilus HB27, comp... 260 1e-67
AP007161_485(AP007161|pid:none) Aspergillus oryzae RIB40 genomic... 260 1e-67
AM270168_163(AM270168|pid:none) Aspergillus niger contig An08c01... 259 2e-67
BT063712_1(BT063712|pid:none) Zea mays full-length cDNA clone ZM... 259 3e-67
BT039743_1(BT039743|pid:none) Zea mays full-length cDNA clone ZM... 259 3e-67
AP006840_619(AP006840|pid:none) Symbiobacterium thermophilum IAM... 259 4e-67
AP008226_1430(AP008226|pid:none) Thermus thermophilus HB8 genomi... 258 5e-67
AJ001540_1(AJ001540|pid:none) Penicillium chrysogenum mRNA for p... 258 8e-67
AE017221_1059(AE017221|pid:none) Thermus thermophilus HB27, comp... 257 1e-66
AE017333_1020(AE017333|pid:none) Bacillus licheniformis DSM 13, ... 256 2e-66
CP000112_1721(CP000112|pid:none) Desulfovibrio desulfuricans G20... 256 2e-66
CP000557_570(CP000557|pid:none) Geobacillus thermodenitrificans ... 256 2e-66
AP008226_1463(AP008226|pid:none) Thermus thermophilus HB8 genomi... 255 4e-66
CP000478_107(CP000478|pid:none) Syntrophobacter fumaroxidans MPO... 255 4e-66
A69261(A69261) probable acid-CoA ligase (EC 6.2.1.-) AF0089 [sim... 254 9e-66
BT055550_1(BT055550|pid:none) Zea mays full-length cDNA clone ZM... 254 1e-65
CP000930_75(CP000930|pid:none) Heliobacterium modesticaldum Ice1... 253 1e-65
CP000386_1717(CP000386|pid:none) Rubrobacter xylanophilus DSM 99... 253 2e-65
AB005247_1(AB005247|pid:none) Arabidopsis thaliana genomic DNA, ... 253 3e-65
BT034081_1(BT034081|pid:none) Zea mays full-length cDNA clone ZM... 252 4e-65
CP000660_436(CP000660|pid:none) Pyrobaculum arsenaticum DSM 1351... 251 6e-65
CP000817_3886(CP000817|pid:none) Lysinibacillus sphaericus C3-41... 250 2e-64
CP001197_251(CP001197|pid:none) Desulfovibrio vulgaris str. 'Miy... 249 2e-64
CU633899_314(CU633899|pid:none) Podospora anserina genomic DNA c... 248 5e-64
CP001322_2022(CP001322|pid:none) Desulfatibacillum alkenivorans ... 248 5e-64
CU640366_200(CU640366|pid:none) Podospora anserina genomic DNA c... 248 6e-64
AP008230_2317(AP008230|pid:none) Desulfitobacterium hafniense Y5... 248 6e-64
CP000859_337(CP000859|pid:none) Desulfococcus oleovorans Hxd3, c... 247 1e-63
CP001022_2132(CP001022|pid:none) Exiguobacterium sibiricum 255-1... 244 7e-63
AM920436_2201(AM920436|pid:none) Penicillium chrysogenum Wiscons... 243 2e-62
AP003313_16(AP003313|pid:none) Oryza sativa Japonica Group genom... 243 3e-62
CP001087_4708(CP001087|pid:none) Desulfobacterium autotrophicum ... 242 4e-62
BT038590_1(BT038590|pid:none) Zea mays full-length cDNA clone ZM... 242 4e-62
CP001037_1884(CP001037|pid:none) Nostoc punctiforme PCC 73102, c... 241 8e-62
CP000867_322(CP000867|pid:none) Methanococcus maripaludis C6, co... 241 1e-61
DQ986905_1(DQ986905|pid:none) Leucaena leucocephala 4-coumarate:... 240 2e-61
AP007161_296(AP007161|pid:none) Aspergillus oryzae RIB40 genomic... 240 2e-61
AE000782_828(AE000782|pid:none) Archaeoglobus fulgidus DSM 4304,... 240 2e-61
(P31686) RecName: Full=4-coumarate--CoA ligase 1; Short... 238 5e-61
H72454(H72454)probable fatty-acid-CoA ligase (EC 6.2.1.-) APE228... 237 1e-60
BA000002_1489(BA000002|pid:none) Aeropyrum pernix K1 DNA, comple... 237 1e-60
CP001364_711(CP001364|pid:none) Chloroflexus sp. Y-400-fl, compl... 236 2e-60
CP001336_3585(CP001336|pid:none) Desulfitobacterium hafniense DC... 235 5e-60
CP000359_1062(CP000359|pid:none) Deinococcus geothermalis DSM 11... 234 9e-60
CP000230_1308(CP000230|pid:none) Rhodospirillum rubrum ATCC 1117... 233 3e-59
CP000527_1619(CP000527|pid:none) Desulfovibrio vulgaris subsp. v... 232 4e-59
AE017285_1447(AE017285|pid:none) Desulfovibrio vulgaris subsp. v... 232 4e-59
AP008955_3127(AP008955|pid:none) Brevibacillus brevis NBRC 10059... 231 8e-59
CP001638_607(CP001638|pid:none) Geobacillus sp. WCH70, complete ... 231 8e-59
BT035138_1(BT035138|pid:none) Zea mays full-length cDNA clone ZM... 231 1e-58
(Q8RU95) RecName: Full=4-coumarate--CoA ligase-like 6; ... 229 2e-58
AE000513_1656(AE000513|pid:none) Deinococcus radiodurans R1 chro... 229 3e-58
AM920437_2478(AM920437|pid:none) Penicillium chrysogenum Wiscons... 229 4e-58
CP001114_911(CP001114|pid:none) Deinococcus deserti VCD115, comp... 228 7e-58
BA000043_1030(BA000043|pid:none) Geobacillus kaustophilus HTA426... 228 9e-58
CP000813_953(CP000813|pid:none) Bacillus pumilus SAFR-032, compl... 227 1e-57
AE000782_2340(AE000782|pid:none) Archaeoglobus fulgidus DSM 4304... 226 2e-57
CP000001_988(CP000001|pid:none) Bacillus cereus E33L, complete g... 226 2e-57
CP000686_2033(CP000686|pid:none) Roseiflexus sp. RS-1, complete ... 226 2e-57
AE017194_1187(AE017194|pid:none) Bacillus cereus ATCC 10987, com... 226 3e-57
BA000028_1176(BA000028|pid:none) Oceanobacillus iheyensis HTE831... 226 3e-57
AL009126_1059(AL009126|pid:none) Bacillus subtilis subsp. subtil... 225 4e-57
AE016879_1012(AE016879|pid:none) Bacillus anthracis str. Ames, c... 225 4e-57
CP000485_914(CP000485|pid:none) Bacillus thuringiensis str. Al H... 225 4e-57
AE017355_982(AE017355|pid:none) Bacillus thuringiensis serovar k... 225 6e-57
CP000227_1057(CP000227|pid:none) Bacillus cereus Q1, complete ge... 225 6e-57
CP001177_1097(CP001177|pid:none) Bacillus cereus AH187, complete... 224 7e-57
AE016877_965(AE016877|pid:none) Bacillus cereus ATCC 14579, comp... 224 1e-56
AP009152_352(AP009152|pid:none) Kocuria rhizophila DC2201 DNA, c... 224 1e-56
CP000764_799(CP000764|pid:none) Bacillus cereus subsp. cytotoxis... 224 1e-56
CP000875_1875(CP000875|pid:none) Herpetosiphon aurantiacus ATCC ... 224 1e-56
CP000903_991(CP000903|pid:none) Bacillus weihenstephanensis KBAB... 224 1e-56
CP001407_997(CP001407|pid:none) Bacillus cereus 03BB102, complet... 223 2e-56
AE017340_1815(AE017340|pid:none) Idiomarina loihiensis L2TR, com... 223 2e-56
AE008691_1822(AE008691|pid:none) Thermoanaerobacter tengcongensi... 223 3e-56
CP001358_1236(CP001358|pid:none) Desulfovibrio desulfuricans sub... 223 3e-56
(Q6YYZ2) RecName: Full=4-coumarate--CoA ligase-like 3; ... 222 4e-56
CP001186_1001(CP001186|pid:none) Bacillus cereus G9842, complete... 222 4e-56
(O07610) RecName: Full=Long-chain-fatty-acid--CoA ligase; ... 222 4e-56
CR936257_1307(CR936257|pid:none) Natronomonas pharaonis DSM 2160... 222 4e-56
CR382132_283(CR382132|pid:none) Yarrowia lipolytica strain CLIB1... 221 6e-56
CP000924_570(CP000924|pid:none) Thermoanaerobacter pseudethanoli... 221 1e-55
CP000557_1320(CP000557|pid:none) Geobacillus thermodenitrificans... 220 1e-55
CP000699_3764(CP000699|pid:none) Sphingomonas wittichii RW1, com... 220 1e-55
AE000666_653(AE000666|pid:none) Methanothermobacter thermautotro... 220 2e-55
CP000157_2642(CP000157|pid:none) Erythrobacter litoralis HTCC259... 219 2e-55
CP000686_973(CP000686|pid:none) Roseiflexus sp. RS-1, complete g... 219 2e-55
AC144807_7(AC144807|pid:none) Medicago truncatula clone mth2-9j1... 219 3e-55
CP000884_1070(CP000884|pid:none) Delftia acidovorans SPH-1, comp... 218 7e-55
CP000686_221(CP000686|pid:none) Roseiflexus sp. RS-1, complete g... 218 7e-55
BX842646_252(BX842646|pid:none) Bdellovibrio bacteriovorus compl... 218 7e-55
AF144503_1(AF144503|pid:none) Pinus armandii clone 11 4-coumarat... 218 7e-55
CP000804_1728(CP000804|pid:none) Roseiflexus castenholzii DSM 13... 218 7e-55
AM270325_60(AM270325|pid:none) Aspergillus niger contig An14c018... 218 9e-55
AF144501_1(AF144501|pid:none) Pinus armandii clone 1 4-coumarate... 217 1e-54
CP001322_594(CP001322|pid:none) Desulfatibacillum alkenivorans A... 216 2e-54
CP001283_2950(CP001283|pid:none) Bacillus cereus AH820, complete... 216 3e-54
CP001615_2455(CP001615|pid:none) Exiguobacterium sp. AT1b, compl... 216 3e-54
CP000713_2173(CP000713|pid:none) Psychrobacter sp. PRwf-1, compl... 216 3e-54
CP000560_963(CP000560|pid:none) Bacillus amyloliquefaciens FZB42... 216 3e-54
CP000514_1569(CP000514|pid:none) Marinobacter aquaeolei VT8, com... 216 3e-54
CP001322_689(CP001322|pid:none) Desulfatibacillum alkenivorans A... 215 4e-54
CP000926_4030(CP000926|pid:none) Pseudomonas putida GB-1, comple... 215 6e-54
D88197(D88197) protein ZK1127.2 [imported] - Caenorhabditis eleg... 215 6e-54
EF655902_4(EF655902|pid:none) Uncultured Acidobacteria bacterium... 215 6e-54
CP001390_3515(CP001390|pid:none) Geobacter sp. FRC-32, complete ... 215 6e-54
CP000300_610(CP000300|pid:none) Methanococcoides burtonii DSM 62... 214 8e-54
EF219373_1(EF219373|pid:none) Marinobacter hydrocarbonoclasticus... 214 8e-54
CP001068_711(CP001068|pid:none) Ralstonia pickettii 12J chromoso... 214 1e-53
AM270194_7(AM270194|pid:none) Aspergillus niger contig An09c0050... 214 1e-53
AF150669_1(AF150669|pid:none) Pseudomonas putida long-chain-fatt... 214 1e-53
BA000004_2006(BA000004|pid:none) Bacillus halodurans C-125 DNA, ... 214 1e-53
CP000712_1323(CP000712|pid:none) Pseudomonas putida F1, complete... 214 1e-53
AM911678_1(AM911678|pid:none) Pseudomonas putida acs1 gene for a... 214 1e-53
CP000750_3477(CP000750|pid:none) Kineococcus radiotolerans SRS30... 213 2e-53
CR382128_296(CR382128|pid:none) Yarrowia lipolytica strain CLIB1... 213 2e-53
CP001087_336(CP001087|pid:none) Desulfobacterium autotrophicum H... 213 3e-53
(Q7F1X5) RecName: Full=4-coumarate--CoA ligase-like 5; ... 212 5e-53
CP000713_2172(CP000713|pid:none) Psychrobacter sp. PRwf-1, compl... 212 5e-53
CP000447_1720(CP000447|pid:none) Shewanella frigidimarina NCIMB ... 212 5e-53
AP008957_85(AP008957|pid:none) Rhodococcus erythropolis PR4 DNA,... 212 5e-53
CP000431_6029(CP000431|pid:none) Rhodococcus jostii RHA1, comple... 212 5e-53
CU633749_2227(CU633749|pid:none) Cupriavidus taiwanensis str. LM... 211 6e-53
AE004091_3299(AE004091|pid:none) Pseudomonas aeruginosa PAO1, co... 211 8e-53
AM181176_4720(AM181176|pid:none) Pseudomonas fluorescens SBW25 c... 211 8e-53
CP000444_3117(CP000444|pid:none) Shewanella sp. MR-7, complete g... 211 1e-52
CP000438_1699(CP000438|pid:none) Pseudomonas aeruginosa UCBPP-PA... 211 1e-52
CP000875_2395(CP000875|pid:none) Herpetosiphon aurantiacus ATCC ... 210 1e-52
CP000454_3557(CP000454|pid:none) Arthrobacter sp. FB24, complete... 210 1e-52
CR543861_217(CR543861|pid:none) Acinetobacter sp. ADP1 complete ... 210 1e-52
CP001279_1316(CP001279|pid:none) Nautilia profundicola AmH, comp... 210 1e-52
CP000863_215(CP000863|pid:none) Acinetobacter baumannii ACICU, c... 210 1e-52
CP000446_881(CP000446|pid:none) Shewanella sp. MR-4, complete ge... 210 2e-52
CP000961_2386(CP000961|pid:none) Shewanella woodyi ATCC 51908, c... 209 2e-52
CP000076_4531(CP000076|pid:none) Pseudomonas fluorescens Pf-5, c... 209 2e-52
CP000943_162(CP000943|pid:none) Methylobacterium sp. 4-46, compl... 209 2e-52
CP000099_2727(CP000099|pid:none) Methanosarcina barkeri str. Fus... 209 2e-52
AF150687_1(AF150687|pid:none) Solanum tuberosum 4-coumarate:coen... 209 2e-52
BA000043_2136(BA000043|pid:none) Geobacillus kaustophilus HTA426... 209 3e-52
AE004437_1030(AE004437|pid:none) Halobacterium sp. NRC-1, comple... 209 3e-52
AM502237_80(AM502237|pid:none) Leishmania infantum chromosome 19. 209 4e-52
CP000302_1612(CP000302|pid:none) Shewanella denitrificans OS217,... 209 4e-52
CP000090_820(CP000090|pid:none) Ralstonia eutropha JMP134 chromo... 209 4e-52
CP000804_866(CP000804|pid:none) Roseiflexus castenholzii DSM 139... 208 5e-52
AF144505_1(AF144505|pid:none) Cathaya argyrophylla 4-coumarate:C... 208 7e-52
CT005258_106(CT005258|pid:none) Leishmania major strain Friedlin... 208 7e-52
CP001614_1659(CP001614|pid:none) Teredinibacter turnerae T7901, ... 208 7e-52
AE000782_1491(AE000782|pid:none) Archaeoglobus fulgidus DSM 4304... 208 7e-52
CP001053_1023(CP001053|pid:none) Burkholderia phytofirmans PsJN ... 207 9e-52
CP000922_180(CP000922|pid:none) Anoxybacillus flavithermus WK1, ... 207 9e-52
CP001089_1371(CP001089|pid:none) Geobacter lovleyi SZ, complete ... 207 9e-52
CR382131_833(CR382131|pid:none) Yarrowia lipolytica strain CLIB1... 207 1e-51
CP001638_1734(CP001638|pid:none) Geobacillus sp. WCH70, complete... 207 1e-51
AE006470_46(AE006470|pid:none) Chlorobium tepidum TLS, complete ... 207 2e-51
AM494956_128(AM494956|pid:none) Leishmania braziliensis chromoso... 206 2e-51
BA000043_1505(BA000043|pid:none) Geobacillus kaustophilus HTA426... 206 3e-51
AP008957_373(AP008957|pid:none) Rhodococcus erythropolis PR4 DNA... 206 3e-51
CP001103_1131(CP001103|pid:none) Alteromonas macleodii 'Deep eco... 206 3e-51
AB471785_2(AB471785|pid:none) Rhodococcus sp. HI-31 DNA, cyclohe... 206 4e-51
CP000141_1569(CP000141|pid:none) Carboxydothermus hydrogenoforma... 206 4e-51
CU861906_785(CU861906|pid:none) Ralstonia solanacearum strain Mo... 206 4e-51
CP000142_2105(CP000142|pid:none) Pelobacter carbinolicus DSM 238... 205 5e-51
BA000045_1146(BA000045|pid:none) Gloeobacter violaceus PCC 7421 ... 205 5e-51
CP000088_2151(CP000088|pid:none) Thermobifida fusca YX, complete... 205 5e-51
AP007151_784(AP007151|pid:none) Aspergillus oryzae RIB40 genomic... 205 5e-51
CP001322_4846(CP001322|pid:none) Desulfatibacillum alkenivorans ... 205 5e-51
(Q0P4F7) RecName: Full=Acyl-CoA synthetase family member 2, mito... 205 6e-51
CP000431_3743(CP000431|pid:none) Rhodococcus jostii RHA1, comple... 205 6e-51
CP001348_1822(CP001348|pid:none) Clostridium cellulolyticum H10,... 204 8e-51
(Q336M7) RecName: Full=4-coumarate--CoA ligase-like 2; ... 204 8e-51
CP000817_257(CP000817|pid:none) Lysinibacillus sphaericus C3-41,... 204 1e-50
CP000148_2660(CP000148|pid:none) Geobacter metallireducens GS-15... 204 1e-50
CP001087_989(CP001087|pid:none) Desulfobacterium autotrophicum H... 204 1e-50
AL646052_780(AL646052|pid:none) Ralstonia solanacearum GMI1000 c... 204 1e-50
CP001230_1887(CP001230|pid:none) Persephonella marina EX-H1, com... 204 1e-50
CP000358_479(CP000358|pid:none) Deinococcus geothermalis DSM 113... 204 1e-50
EF567062_3(EF567062|pid:none) Triticum aestivum cultivar Glenlea... 204 1e-50
AE008384_2392(AE008384|pid:none) Methanosarcina mazei strain Goe... 203 2e-50
AJ278455_1(AJ278455|pid:none) Juglans nigra mRNA for 4-coumarate... 203 2e-50
AP011115_3634(AP011115|pid:none) Rhodococcus opacus B4 DNA, comp... 203 2e-50
BA000030_378(BA000030|pid:none) Streptomyces avermitilis MA-4680... 203 2e-50
AE004091_3300(AE004091|pid:none) Pseudomonas aeruginosa PAO1, co... 203 2e-50
AM114193_378(AM114193|pid:none) Uncultured methanogenic archaeon... 203 2e-50
CR382127_427(CR382127|pid:none) Yarrowia lipolytica strain CLIB1... 203 2e-50
CP000503_2235(CP000503|pid:none) Shewanella sp. W3-18-1, complet... 202 3e-50
CP000472_2186(CP000472|pid:none) Shewanella piezotolerans WP3, c... 202 3e-50
AE014299_3562(AE014299|pid:none) Shewanella oneidensis MR-1, com... 202 3e-50
CP000804_550(CP000804|pid:none) Roseiflexus castenholzii DSM 139... 202 4e-50
CP000444_2236(CP000444|pid:none) Shewanella sp. MR-7, complete g... 202 4e-50
AP009389_1376(AP009389|pid:none) Pelotomaculum thermopropionicum... 202 5e-50
CP000753_2608(CP000753|pid:none) Shewanella baltica OS185, compl... 202 5e-50
AM933173_1266(AM933173|pid:none) Salmonella enterica subsp. ente... 202 5e-50
AE017333_2040(AE017333|pid:none) Bacillus licheniformis DSM 13, ... 201 7e-50
CP000378_1045(CP000378|pid:none) Burkholderia cenocepacia AU 105... 201 9e-50
CP000447_2045(CP000447|pid:none) Shewanella frigidimarina NCIMB ... 201 9e-50
CP001635_3617(CP001635|pid:none) Variovorax paradoxus S110 chrom... 201 9e-50
CP000388_2782(CP000388|pid:none) Pseudoalteromonas atlantica T6c... 201 9e-50
AE017220_1811(AE017220|pid:none) Salmonella enterica subsp. ente... 201 9e-50
(P63521) RecName: Full=Long-chain-fatty-acid--CoA ligase; ... 201 1e-49
CP001063_1776(CP001063|pid:none) Shigella boydii CDC 3083-94, co... 201 1e-49
CP000857_1854(CP000857|pid:none) Salmonella enterica subsp. ente... 201 1e-49
CP000247_1731(CP000247|pid:none) Escherichia coli 536, complete ... 201 1e-49
(P69451) RecName: Full=Long-chain-fatty-acid--CoA ligase; ... 201 1e-49
FM178379_2698(FM178379|pid:none) Aliivibrio salmonicida LFI1238 ... 200 1e-49
AE005674_1423(AE005674|pid:none) Shigella flexneri 2a str. 301, ... 200 1e-49
AE015928_2781(AE015928|pid:none) Bacteroides thetaiotaomicron VP... 200 1e-49
(Q8XDR6) RecName: Full=Long-chain-fatty-acid--CoA ligase; ... 200 1e-49
AP008957_1818(AP008957|pid:none) Rhodococcus erythropolis PR4 DN... 200 1e-49
CP000469_2370(CP000469|pid:none) Shewanella sp. ANA-3, complete ... 200 2e-49
CP001252_2378(CP001252|pid:none) Shewanella baltica OS223, compl... 200 2e-49
AM747720_1535(AM747720|pid:none) Burkholderia cenocepacia J2315 ... 199 3e-49
AM260479_1283(AM260479|pid:none) Ralstonia eutropha H16 chromoso... 199 3e-49
EU899775_1(EU899775|pid:none) Escherichia coli strain 493/89 lon... 199 3e-49
CP000507_1927(CP000507|pid:none) Shewanella amazonensis SB2B, co... 199 3e-49
BX950851_2351(BX950851|pid:none) Erwinia carotovora subsp. atros... 199 3e-49
CP001116_212(CP001116|pid:none) Deinococcus deserti VCD115 plasm... 199 3e-49
CP000753_1861(CP000753|pid:none) Shewanella baltica OS185, compl... 199 3e-49
CP001138_1227(CP001138|pid:none) Salmonella enterica subsp. ente... 199 3e-49
CU928158_1212(CU928158|pid:none) Escherichia fergusonii ATCC 354... 199 3e-49
CP000036_1177(CP000036|pid:none) Shigella boydii Sb227, complete... 199 3e-49
CP000563_1833(CP000563|pid:none) Shewanella baltica OS155, compl... 199 4e-49
AP006840_798(AP006840|pid:none) Symbiobacterium thermophilum IAM... 199 4e-49
CP001408_4065(CP001408|pid:none) Burkholderia pseudomallei MSHR3... 199 4e-49
CP000266_1328(CP000266|pid:none) Shigella flexneri 5 str. 8401, ... 198 6e-49
AE017354_1528(AE017354|pid:none) Legionella pneumophila subsp. p... 198 6e-49
CP000440_1411(CP000440|pid:none) Burkholderia ambifaria AMMD chr... 198 7e-49
CR628336_1514(CR628336|pid:none) Legionella pneumophila str. Par... 198 7e-49
CP001052_1629(CP001052|pid:none) Burkholderia phytofirmans PsJN ... 197 1e-48
CP000697_253(CP000697|pid:none) Acidiphilium cryptum JF-5, compl... 197 1e-48
AE014299_2524(AE014299|pid:none) Shewanella oneidensis MR-1, com... 197 1e-48
CP000026_987(CP000026|pid:none) Salmonella enterica subsp. enter... 197 1e-48
CP000964_1925(CP000964|pid:none) Klebsiella pneumoniae 342, comp... 197 1e-48
CP000474_923(CP000474|pid:none) Arthrobacter aurescens TC1, comp... 197 1e-48
CP000113_6975(CP000113|pid:none) Myxococcus xanthus DK 1622, com... 197 1e-48
CP000482_464(CP000482|pid:none) Pelobacter propionicus DSM 2379,... 197 1e-48
CP000151_1486(CP000151|pid:none) Burkholderia sp. 383 chromosome... 197 1e-48
CR382131_514(CR382131|pid:none) Yarrowia lipolytica strain CLIB1... 197 1e-48
CP000633_410(CP000633|pid:none) Agrobacterium vitis S4 chromosom... 197 2e-48
CP000542_1645(CP000542|pid:none) Verminephrobacter eiseniae EF01... 196 2e-48
CP000352_2626(CP000352|pid:none) Ralstonia metallidurans CH34, c... 196 2e-48
CP001139_2279(CP001139|pid:none) Vibrio fischeri MJ11 chromosome... 196 2e-48
CP000859_1200(CP000859|pid:none) Desulfococcus oleovorans Hxd3, ... 196 2e-48
BA000045_435(BA000045|pid:none) Gloeobacter violaceus PCC 7421 D... 196 3e-48
CP000570_3904(CP000570|pid:none) Burkholderia pseudomallei 668 c... 196 3e-48
BX571965_3423(BX571965|pid:none) Burkholderia pseudomallei strai... 196 3e-48
BT040417_1(BT040417|pid:none) Zea mays full-length cDNA clone ZM... 196 3e-48
CP000449_2644(CP000449|pid:none) Maricaulis maris MCS10, complet... 196 3e-48
CP000282_1882(CP000282|pid:none) Saccharophagus degradans 2-40, ... 196 4e-48
CP001131_3086(CP001131|pid:none) Anaeromyxobacter sp. K, complet... 196 4e-48
CR626927_4151(CR626927|pid:none) Bacteroides fragilis NCTC 9343,... 196 4e-48
CR936257_1684(CR936257|pid:none) Natronomonas pharaonis DSM 2160... 196 4e-48
CP000887_269(CP000887|pid:none) Brucella abortus S19 chromosome ... 196 4e-48
CP000728_3269(CP000728|pid:none) Clostridium botulinum F str. La... 196 4e-48
AE014291_280(AE014291|pid:none) Brucella suis 1330 chromosome I,... 196 4e-48
CP001099_1968(CP001099|pid:none) Chlorobaculum parvum NCIB 8327,... 196 4e-48
CP001488_290(CP001488|pid:none) Brucella melitensis ATCC 23457 c... 196 4e-48
BX248355_6(BX248355|pid:none) Corynebacterium diphtheriae gravis... 195 5e-48
CP000922_1497(CP000922|pid:none) Anoxybacillus flavithermus WK1,... 195 5e-48
CP000961_2913(CP000961|pid:none) Shewanella woodyi ATCC 51908, c... 195 5e-48
AE015451_3426(AE015451|pid:none) Pseudomonas putida KT2440 compl... 195 5e-48
CP001628_2171(CP001628|pid:none) Micrococcus luteus NCTC 2665, c... 195 5e-48
AP008955_2581(AP008955|pid:none) Brevibacillus brevis NBRC 10059... 195 5e-48
CP001322_3470(CP001322|pid:none) Desulfatibacillum alkenivorans ... 195 5e-48
CP000708_279(CP000708|pid:none) Brucella ovis ATCC 25840 chromos... 195 6e-48
CP001016_3334(CP001016|pid:none) Beijerinckia indica subsp. indi... 195 6e-48
CP000142_1345(CP000142|pid:none) Pelobacter carbinolicus DSM 238... 195 6e-48
CP000821_1665(CP000821|pid:none) Shewanella sediminis HAW-EB3, c... 195 6e-48
CP000254_1577(CP000254|pid:none) Methanospirillum hungatei JF-1,... 194 8e-48
CP000931_1821(CP000931|pid:none) Shewanella halifaxensis HAW-EB4... 194 8e-48
CU633750_1113(CU633750|pid:none) Cupriavidus taiwanensis str. LM... 194 8e-48
CP001601_283(CP001601|pid:none) Corynebacterium aurimucosum ATCC... 194 8e-48
CP000353_880(CP000353|pid:none) Ralstonia metallidurans CH34 meg... 194 1e-47
AM286415_2252(AM286415|pid:none) Yersinia enterocolitica subsp. ... 194 1e-47
CP001087_2020(CP001087|pid:none) Desulfobacterium autotrophicum ... 194 1e-47
CP001252_3275(CP001252|pid:none) Shewanella baltica OS223, compl... 194 1e-47
CP000961_3992(CP000961|pid:none) Shewanella woodyi ATCC 51908, c... 194 1e-47
CU234118_6217(CU234118|pid:none) Bradyrhizobium sp. ORS278,compl... 194 1e-47
CP000606_2586(CP000606|pid:none) Shewanella loihica PV-4, comple... 194 1e-47
BX571965_1899(BX571965|pid:none) Burkholderia pseudomallei strai... 194 1e-47
CP000680_1485(CP000680|pid:none) Pseudomonas mendocina ymp, comp... 193 2e-47
CP000884_945(CP000884|pid:none) Delftia acidovorans SPH-1, compl... 193 2e-47
CP000721_2073(CP000721|pid:none) Clostridium beijerinckii NCIMB ... 193 2e-47
CP000086_1094(CP000086|pid:none) Burkholderia thailandensis E264... 193 2e-47
T28932(T28932) probable 4-coumarate-CoA ligase (EC 6.2.1.12) - C... 193 2e-47

>(Q54P77) RecName: Full=Probable 4-coumarate--CoA ligase 1;
Short=4CL 1; EC=6.2.1.12; AltName:
Full=4-coumaroyl-CoA synthase 1;
Length = 551

Score = 1050 bits (2715), Expect = 0.0
Identities = 529/536 (98%), Positives = 531/536 (99%)
Frame = +1

Query: 316 MIRIINGQTYFASKYPNIIIPEKLIPQLILKHIRSKPDQVLLVDGLTFKEYSSHFVADTI 495
MI + GQTYF SKYPNIIIPEK +PQLILKHIRSKPDQVLLVDGLTFKEYSSHFVADTI
Sbjct: 1 MIIKVKGQTYFTSKYPNIIIPEKPVPQLILKHIRSKPDQVLLVDGLTFKEYSSHFVADTI 60

Query: 496 EKVACGLNKLNIKKGDVLGVILPNLPEYVPIFHGTLLMGGITSLVNPDYTIEELSHTLAT 675
EKVACGLNKLNIKKGDVLGVILPNLPEYVPIFHGTLLMGGITSLVNPDYTIEELSHTLAT
Sbjct: 61 EKVACGLNKLNIKKGDVLGVILPNLPEYVPIFHGTLLMGGITSLVNPDYTIEELSHTLAT 120

Query: 676 VSPRYLAVTLAVYEKIKNDLKRVFPSVEKVILVDIAGQTLKEIDQLTLSSDGIVMSFNQL 855
VSPRYLAVTLAVYEKIKNDLKRVFPSVEKVILVDIAGQTLKEIDQLTLSSDGIVMSFNQL
Sbjct: 121 VSPRYLAVTLAVYEKIKNDLKRVFPSVEKVILVDIAGQTLKEIDQLTLSSDGIVMSFNQL 180

Query: 856 INNNGKDYPIVRIDPKKDTAIIPFSSGTTGLFKGVCLSHHNIVSNTYQTQTIETSTYKKN 1035
INNNGKDYPIVRIDPKKDTAIIPFSSGTTGLFKGVCLSHHNIVSNTYQTQTIETSTYKKN
Sbjct: 181 INNNGKDYPIVRIDPKKDTAIIPFSSGTTGLFKGVCLSHHNIVSNTYQTQTIETSTYKKN 240

Query: 1036 DTVMGILPFFHIYGLMLFLMLMVKQGHRVVVLPKFEPVRFLELIQKYKVAISFIVPPVAI 1215
DTVMGILPFFHIYGLMLFLMLMVKQGHRVVVLPKFEPVRFLELIQKYKVAISFIVPPVAI
Sbjct: 241 DTVMGILPFFHIYGLMLFLMLMVKQGHRVVVLPKFEPVRFLELIQKYKVAISFIVPPVAI 300

Query: 1216 MFAKSPIVDKFDLSSLRTLFSGAAPLSSEVEDLIKERFKGRLVIKQGYGATELSPACFVI 1395
MFAKSPIVDKFDLSSLRTLFSGAAPLSSEVEDLIKERFKGRLVIKQGYGATELSPACFVI
Sbjct: 301 MFAKSPIVDKFDLSSLRTLFSGAAPLSSEVEDLIKERFKGRLVIKQGYGATELSPACFVI 360

Query: 1396 PSGLVKSGSAGILLPNQLAKIISPETGENLGMGEKGEICIKGPNVMLGYYNNEKATNEVI 1575
PSGLVKSGSAGILLPNQLAKIISPETGENLGMGEKGEICIKGPNVMLGYYNNEKATNEVI
Sbjct: 361 PSGLVKSGSAGILLPNQLAKIISPETGENLGMGEKGEICIKGPNVMLGYYNNEKATNEVI 420

Query: 1576 DKDGFLKTGDIGYVDEDGYYFIVDRSKELIKCKGFQVPPAELEALLLSHPKVADACVVGL 1755
DKDGFLKTGDIGYVDEDGYYFIVDRSKELIKCKGFQVPPAELEALLLSHPKVADACVVGL
Sbjct: 421 DKDGFLKTGDIGYVDEDGYYFIVDRSKELIKCKGFQVPPAELEALLLSHPKVADACVVGL 480

Query: 1756 SKGDMGEVPRGFVVIKQNESLTEKELLDWAHPKIANYKHFRGGIFFIPAIPKSATG 1923
SKGDMGEVPRGFVVIKQNESLTEKELLDWAHPKIANYKHFRGGIFFIPAIPKSATG
Sbjct: 481 SKGDMGEVPRGFVVIKQNESLTEKELLDWAHPKIANYKHFRGGIFFIPAIPKSATG 536

Lambda K H
0.318 0.134 0.401

Gapped
Lambda K H
0.267 0.0410 0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3236559
Number of Hits to DB: 3,049,439,713
Number of extensions: 58650262
Number of successful extensions: 182505
Number of sequences better than 10.0: 7230
Number of HSP's gapped: 169788
Number of HSP's successfully gapped: 9495
Length of query: 700
Length of database: 1,051,180,864
Length adjustment: 136
Effective length of query: 564
Effective length of database: 611,008,840
Effective search space: 344608985760
Effective search space used: 344608985760
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)

PSORT

psg: 0.78 gvh: 0.36 alm: 0.28 top: 0.60 tms: 0.07 mit: 0.41 mip: 0.08
nuc: 0.08 erl: 0.00 erm: 0.60 pox: 0.00 px2: 0.00 vac: 0.33 rnp: 0.00
act: 0.00 caa: 0.00 yqr: 1.00 tyr: 0.00 leu: 0.07 gpi: 0.00 myr: 0.00
dna: 0.00 rib: 0.00 bac: 0.00 m1a: 0.00 m1b: 1.00 m2 : 0.00 mNt: 0.00
m3a: 0.00 m3b: 0.00 m_ : 0.00

28.0 %: cytoplasmic
28.0 %: nuclear
20.0 %: mitochondrial
8.0 %: plasma membrane
8.0 %: endoplasmic reticulum
4.0 %: vesicles of secretory system
4.0 %: peroxisomal

>> prediction for Contig-U15045-1 is cyt

VS (DIR, S) 0
VH (FL, L) 0
VF (FL, S) 0
AH (FL, L) 0
AF (FL, S) 0
SL (DIR, L) 0
SS (DIR, S) 2
SH (FL, L) 0
SF (FL, S) 1
CH (FL, L) 0
CF (FL, S) 1
FCL (DIR, L) 0
FC (DIR, S) 0
FC-IC (SUB) 0