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Dicty_cDB
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Dicty_cDB
Contig List | Clone List | cDNA Library List
Atlas
Atlas | Atlas Image List
Contig-U15039-1
Contig ID Contig-U15039-1
Contig update 2004. 6.11
Contig sequence 
>Contig-U15039-1 (Contig-U15039-1Q) /CSM_Contig/Contig-U15039-1Q.Seq.d
AAATTTTCACCACTTTATTCGCATAGTTTTATTATCATATATTATTTATA
TATATACAAACACACAAACACATAAAAACTTTTTTTAATAAATAGATAAT
TTGTATAACAGAAACAAAATAATGGCAGCTCACAAACGTTTACAAAAAGA
AATCACCGATATGCTCAAAACTCCACCATCATGGTGTTCAGCTCATCTTG
TAGATGATAATTTACAAAAATGGAAAGCAACTGTTCAAGGACCAGAAGGA
TCTCCATTCGAAAAAGGTGTATTTAGTATGGATATTGATATTCCAGCTGA
TTATCCATTCAAACCACCAACATTAAAATTTACAACTAAAATCTATCATC
CAAATATTAAAACATCTGATGGAGCAATTTGTGCAGAAGTATTCTCAACA
TGGAGTCCTCAATTAAAGATTCTTGATGTTCTTACAACAATTCGTTCAAT
TCTTACTGATCCAAACCCAGATAATCCTTTGGAAACTGAAATCGCTCAAC
AATTCAAAACTGATAGAAATGCATTCAATAAAACCGCCAAAGAATGGACT
AAAAAATATGCCAAGTAAAAACGCGATTTTAATGGTATATGTGAGAAGAT
AGAAATAGAAA
Gap no gap
Contig length 611
Chromosome number (1..6, M) 4
Chromosome length 5430582
Start point 2576718
End point 2576108
Strand (PLUS/MINUS) MINUS
Number of clones 2
Number of EST 2
Link to clone list U15039
List of clone(s) 

est1=VHE317E,1,611
est2=AHL123F,82,602
Translated Amino Acid sequence 
nfhhfirivllsyiiyiytntqthknff**IDNLYNRNKIMAAHKRLQKEITDMLKTPPS
WCSAHLVDDNLQKWKATVQGPEGSPFEKGVFSMDIDIPADYPFKPPTLKFTTKIYHPNIK
TSDGAICAEVFSTWSPQLKILDVLTTIRSILTDPNPDNPLETEIAQQFKTDRNAFNKTAK
EWTKKYAK*krdfngicekieie
Translated Amino Acid sequence (All Frames) 
Frame A:
kfsplyshsfiiiyylyiykhtnt*klflinr*fv*qkqnngssqtftkrnhryaqnsti
mvfssscr**ftkmesncsrtrrisirkrci*ygy*yss*lsiqttnikiyn*nlssky*
ni*wsnlcrsilnmessikds*csynnsfnsy*skpr*sfgn*nrstiqn**kciq*nrq
rmd*kicqvktrf*wym*edrnr


Frame B:
nfhhfirivllsyiiyiytntqthknff**IDNLYNRNKIMAAHKRLQKEITDMLKTPPS
WCSAHLVDDNLQKWKATVQGPEGSPFEKGVFSMDIDIPADYPFKPPTLKFTTKIYHPNIK
TSDGAICAEVFSTWSPQLKILDVLTTIRSILTDPNPDNPLETEIAQQFKTDRNAFNKTAK
EWTKKYAK*krdfngicekieie


Frame C:
ifttlfa*fyyhilfiyiqthkhiktffnk*iicitetk*wqltnvykkkspicsklhhh
gvqlil*miiykngkqlfkdqkdlhskkvylvwilifqliihsnhqh*nlqlksiiqilk
hlmeqfvqkysqhgvln*rflmflqqfvqflliqtqiilwklkslnnskliemhsikppk
nglknmpsknailmvyvrr*k*k
own update 2004. 6.23
Homology vs CSM-cDNA 
Query= Contig-U15039-1 (Contig-U15039-1Q)
/CSM_Contig/Contig-U15039-1Q.Seq.d
         (611 letters)

Database: CSM
           8402 sequences; 8,075,542 total letters


                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

Contig-U15039-1 (Contig-U15039-1Q) /CSM_Contig/Conti...  1059  0.0
Contig-U03567-1 (Contig-U03567-1Q) /CSM_Contig/Conti...    42  0.001
Contig-U13999-1 (Contig-U13999-1Q) /CSM_Contig/Conti...    40  0.004
Contig-U13346-1 (Contig-U13346-1Q) /CSM_Contig/Conti...    40  0.004
Contig-U11302-1 (Contig-U11302-1Q) /CSM_Contig/Conti...    40  0.004
Contig-U14130-1 (Contig-U14130-1Q) /CSM_Contig/Conti...    36  0.061
Contig-U13830-1 (Contig-U13830-1Q) /CSM_Contig/Conti...    36  0.061
Contig-U04470-1 (Contig-U04470-1Q) /CSM_Contig/Conti...    36  0.061
Contig-U09266-1 (Contig-U09266-1Q) /CSM_Contig/Conti...    34  0.24
Contig-U06667-1 (Contig-U06667-1Q) /CSM_Contig/Conti...    34  0.24

>Contig-U15039-1 (Contig-U15039-1Q) /CSM_Contig/Contig-U15039-1Q.Seq.d
          Length = 611

 Score = 1059 bits (534), Expect = 0.0
 Identities = 548/555 (98%)
 Strand = Plus / Plus

                                                                       
Query: 57  caaacacacaaacacataaaaacnnnnnnnaataaatagataatttgtataacagaaaca 116
           |||||||||||||||||||||||       ||||||||||||||||||||||||||||||
Sbjct: 57  caaacacacaaacacataaaaactttttttaataaatagataatttgtataacagaaaca 116

                                                                       
Query: 117 aaataatggcagctcacaaacgtttacaaaaagaaatcaccgatatgctcaaaactccac 176
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 117 aaataatggcagctcacaaacgtttacaaaaagaaatcaccgatatgctcaaaactccac 176

                                                                       
Query: 177 catcatggtgttcagctcatcttgtagatgataatttacaaaaatggaaagcaactgttc 236
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 177 catcatggtgttcagctcatcttgtagatgataatttacaaaaatggaaagcaactgttc 236

                                                                       
Query: 237 aaggaccagaaggatctccattcgaaaaaggtgtatttagtatggatattgatattccag 296
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 237 aaggaccagaaggatctccattcgaaaaaggtgtatttagtatggatattgatattccag 296

                                                                       
Query: 297 ctgattatccattcaaaccaccaacattaaaatttacaactaaaatctatcatccaaata 356
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 297 ctgattatccattcaaaccaccaacattaaaatttacaactaaaatctatcatccaaata 356

                                                                       
Query: 357 ttaaaacatctgatggagcaatttgtgcagaagtattctcaacatggagtcctcaattaa 416
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 357 ttaaaacatctgatggagcaatttgtgcagaagtattctcaacatggagtcctcaattaa 416

                                                                       
Query: 417 agattcttgatgttcttacaacaattcgttcaattcttactgatccaaacccagataatc 476
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 417 agattcttgatgttcttacaacaattcgttcaattcttactgatccaaacccagataatc 476

                                                                       
Query: 477 ctttggaaactgaaatcgctcaacaattcaaaactgatagaaatgcattcaataaaaccg 536
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 477 ctttggaaactgaaatcgctcaacaattcaaaactgatagaaatgcattcaataaaaccg 536

                                                                       
Query: 537 ccaaagaatggactaaaaaatatgccaagtaaaaacgcgattttaatggtatatgtgaga 596
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 537 ccaaagaatggactaaaaaatatgccaagtaaaaacgcgattttaatggtatatgtgaga 596

                          
Query: 597 agatagaaatagaaa 611
           |||||||||||||||
Sbjct: 597 agatagaaatagaaa 611


 Score = 56.0 bits (28), Expect = 7e-08
 Identities = 28/28 (100%)
 Strand = Plus / Plus

                                      
Query: 1  aaattttcaccactttattcgcatagtt 28
          ||||||||||||||||||||||||||||
Sbjct: 1  aaattttcaccactttattcgcatagtt 28


>Contig-U03567-1 (Contig-U03567-1Q) /CSM_Contig/Contig-U03567-1Q.Seq.d
          Length = 484

 Score = 42.1 bits (21), Expect = 0.001
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                    
Query: 291 ttccagctgattatccattcaaaccaccaacattaaaattt 331
           ||||| ||||||||||||  |||||||||||| | ||||||
Sbjct: 315 ttccaactgattatccatataaaccaccaacagttaaattt 355


>Contig-U13999-1 (Contig-U13999-1Q) /CSM_Contig/Contig-U13999-1Q.Seq.d
          Length = 836

 Score = 40.1 bits (20), Expect = 0.004
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 335 actaaaatctatcatccaaatatt 358
           |||||||||||||| |||||||||
Sbjct: 247 actaaaatctatcacccaaatatt 270


  Database: CSM
    Posted date:  Jun 21, 2004  1:35 PM
  Number of letters in database: 8,075,542
  Number of sequences in database:  8402
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8490
Number of Sequences: 8402
Number of extensions: 8490
Number of successful extensions: 843
Number of sequences better than 10.0: 74
length of query: 611
length of database: 8,075,542
effective HSP length: 16
effective length of query: 595
effective length of database: 7,941,110
effective search space: 4724960450
effective search space used: 4724960450
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 15 (30.2 bits)
dna update 2009. 1.10
Homology vs DNA 
Query= Contig-U15039-1 (Contig-U15039-1Q) /CSM_Contig/Contig-U15039-1Q.Seq.d
         (611 letters)

Database: ddbj_A
           92,845,959 sequences; 95,242,211,685 total letters

Searching..................................................done

                                                             Score    E
Sequences producing significant alignments:                  (bits) Value  N

(U67838) Dictyostelium discoideum putative ubiquitin conjuga...  1041   0.0    2
(BJ336226) Dictyostelium discoideum cDNA clone:dda53m05, 5' ...  1023   0.0    1
(BJ420345) Dictyostelium discoideum cDNA clone:ddv39b05, 5' ...  1017   0.0    3
(BJ438955) Dictyostelium discoideum cDNA clone:ddv39b05, 3' ...   983   0.0    3
(C93757) Dictyostelium discoideum slug cDNA, clone SSL683.        979   0.0    4
(C91424) Dictyostelium discoideum slug cDNA, clone SSK231.        904   0.0    1
(AU037947) Dictyostelium discoideum slug cDNA, clone SSE483.      882   0.0    1
(C92282) Dictyostelium discoideum slug cDNA, clone SSD339.        835   0.0    1
(AU037374) Dictyostelium discoideum slug cDNA, clone SSD553.      569   0.0    2
(AU038743) Dictyostelium discoideum slug cDNA, clone SSL426.      488   e-133  1
(C89619) Dictyostelium discoideum slug cDNA, clone SSA359.        488   e-133  1
(AU073526) Dictyostelium discoideum slug cDNA, clone SSH460.      476   e-130  1
(AU071866) Dictyostelium discoideum slug cDNA, clone SSC661.      476   e-130  1
(AU073592) Dictyostelium discoideum slug cDNA, clone SSH615.      371   e-106  2
(AU072254) Dictyostelium discoideum slug cDNA, clone SSD842.      347   1e-98  2
(AU072176) Dictyostelium discoideum slug cDNA, clone SSD601.      329   3e-97  3
(EC762035) PSE00008305 rw_mgpallid Polysphondylium pallidum ...    56   1e-13  3
(EC760854) PSE00008130 rw_mgpallid Polysphondylium pallidum ...    56   1e-13  3
(AR550131) Sequence 5262 from patent US 6747137.                   56   2e-11  3
(EX348346) GQ03105.SP6_N04 GQ031 - Xylem Scrapings (Normaliz...    48   8e-10  3
(EX348890) GQ03106.SP6_E20 GQ031 - Xylem Scrapings (Normaliz...    48   8e-10  3
(EX383277) GQ03305.SP6_N04 GQ033 - Terminal leader (Normaliz...    48   9e-10  3
(EX383823) GQ03306.SP6_E20 GQ033 - Terminal leader (Normaliz...    48   9e-10  3
(EX382919) GQ03305.B7_N04 GQ033 - Terminal leader (Normalize...    48   9e-10  3
(EX348519) GQ03106.B7_E20 GQ031 - Xylem Scrapings (Normalize...    48   9e-10  3
(EX347989) GQ03105.B7_N04 GQ031 - Xylem Scrapings (Normalize...    48   1e-09  3
(EX383450) GQ03306.B7_E20 GQ033 - Terminal leader (Normalize...    48   1e-09  3
(L37383) Candida albicans UBC4 mRNA fragment.                      50   1e-09  3
(AR080312) Sequence 3 from patent US 5968761.                      50   2e-09  3
(AR003643) Sequence 3 from patent US 5744343.                      50   2e-09  3
(EH431858) NPE00000055 Neocallimastix patriciarum ZAP II cDN...    44   9e-09  3
(AL441521) T7 end of clone XBD0AA002E05 of library XBD0AA fr...    44   2e-08  3
(CK440205) GQ0023a.BR.1_F07 GQ002: Female cones developmenta...    40   4e-08  3
(DR574333) WS00737.B21_H19 WS-PS-N-A-8 Picea glauca cDNA clo...    40   7e-08  3
(CO216836) WS0046.B21_E24 SS-R-A-5 Picea sitchensis cDNA clo...    40   9e-08  3
(EC434016) 164000458 Sea Urchin Testis cDNA library Strongyl...    70   1e-07  1
(EC431538) 164048645 Sea Urchin Testis cDNA library Strongyl...    70   1e-07  1
(CO244926) WS0039.B21_I21 WS-X-A-3 Picea glauca cDNA clone W...    40   1e-07  3
(FD739698) WS03947.C21_O05 SS-B-24 Picea sitchensis cDNA clo...    40   1e-07  3
(CO232322) WS0053.B21_K17 WS-PP-A-6 Picea glauca cDNA clone ...    40   1e-07  3
(ES866861) WS02797.CR_G05 SS-IL-A-FL-14 Picea sitchensis cDN...    40   1e-07  3
(EX398260) GQ03412.B7_J01 GQ034 - Needles - Mid-season Picea...    40   1e-07  3
(CO208302) WS0094.B21_M24 IS-B-N-A-10 Picea engelmannii x Pi...    40   1e-07  3
(DR546463) WS0313.B21_A09 WS-MC-A-17 Picea glauca cDNA clone...    40   1e-07  3
(DV978935) GQ0172.TB_B18 GQ017: Immature somatic EMBRYOS Pic...    40   1e-07  3
(EX368347) GQ03213.SP6_M19 GQ032 - Shoot tip (Normalized lib...    40   1e-07  3
(EX368290) GQ03213.SP6_K09 GQ032 - Shoot tip (Normalized lib...    40   1e-07  3
(EX367983) GQ03213.B7_M19 GQ032 - Shoot tip (Normalized libr...    40   1e-07  3
(EX367925) GQ03213.B7_K09 GQ032 - Shoot tip (Normalized libr...    40   1e-07  3
(DV991107) GQ0258.B3_E15 GQ025: Annual flush SHOOTS diurnal ...    40   1e-07  3
(CO244284) WS0037.B21_K09 WS-X-A-3 Picea glauca cDNA clone W...    40   1e-07  3
(DV992690) GQ02512.B7_D17 GQ025: Annual flush SHOOTS diurnal...    40   1e-07  3
(EX328511) GQ02828.SP6_G20 GQ028 - Cambium / phloem scrappin...    40   1e-07  3
(DR476779) WS00968.C21_G22 IS-B-N-A-10 Picea engelmannii x P...    40   1e-07  3
(ES665366) WS03927.C21_G23 SS-B-24 Picea sitchensis cDNA clo...    40   1e-07  3
(DV976913) GQ00611.B3_C20 GQ006: Cambium and phloem from mat...    40   2e-07  3
(DR535873) WS02747.C21_I13 SS-IL-A-FL-14 Picea sitchensis cD...    40   2e-07  3
(EX406351) GQ03515.B7_L09 GQ035 - Needles - End of season Pi...    40   2e-07  3
(DR529908) WS02730.C21_P17 SS-IL-A-FL-14 Picea sitchensis cD...    40   2e-07  3
(DV978290) GQ00611.TB_C20 GQ006: Cambium and phloem from mat...    40   2e-07  3
(DV991747) GQ02510.B3_E14 GQ025: Annual flush SHOOTS diurnal...    40   2e-07  3
(EX328643) GQ02828.SP6_M13 GQ028 - Cambium / phloem scrappin...    40   2e-07  3
(CB089832) gp29d06.g1 Cycad Leaf Library (NYBG) Cycas rumphi...    44   2e-07  3
(DV992793) GQ02510.B7_E14 GQ025: Annual flush SHOOTS diurnal...    40   2e-07  3
(DV990502) GQ0254a.B7_B06 GQ025: Annual flush SHOOTS diurnal...    40   2e-07  3
(EX362503) GQ03205.SP6_J22 GQ032 - Shoot tip (Normalized lib...    40   2e-07  3
(DR517831) WS02747.CR_I13 SS-IL-A-FL-14 Picea sitchensis cDN...    40   2e-07  3
(EX374303) GQ03230.B7.1_B12 GQ032 - Shoot tip (Normalized li...    40   2e-07  3
(EX328280) GQ02828.B7_M13 GQ028 - Cambium / phloem scrapping...    40   2e-07  3
(EX382286) GQ03304.SP6_B11 GQ033 - Terminal leader (Normaliz...    40   2e-07  3
(DV982377) GQ0192.TB_G21 GQ019: Clean ROOTS systems - P trea...    40   2e-07  3
(EX312157) GQ02803.SP6_N22 GQ028 - Cambium / phloem scrappin...    40   2e-07  3
(EX311896) GQ02803.B7_N22 GQ028 - Cambium / phloem scrapping...    40   2e-07  3
(DV992490) GQ02512.B3_D17 GQ025: Annual flush SHOOTS diurnal...    40   2e-07  3
(DV979905) GQ0178.B7_B04 GQ017: Immature somatic EMBRYOS Pic...    40   2e-07  3
(DR545867) WS0311.B21_B19 WS-MC-A-17 Picea glauca cDNA clone...    40   2e-07  3
(DV977471) GQ0065.TB_G02 GQ006: Cambium and phloem from matu...    40   2e-07  3
(DR520148) WS0276.BR_C21 SS-IL-A-FL-14 Picea sitchensis cDNA...    40   2e-07  3
(DR506704) WS02718.BR_B23 SS-IL-A-FL-14 Picea sitchensis cDN...    40   2e-07  3
(EX393159) GQ03324.B7_K13 GQ033 - Terminal leader (Normalize...    40   2e-07  3
(DV991598) GQ02511.B3_D14 GQ025: Annual flush SHOOTS diurnal...    40   2e-07  3
(EX381916) GQ03304.B7_B11 GQ033 - Terminal leader (Normalize...    40   2e-07  3
(DR545943) WS0311.B21_F15 WS-MC-A-17 Picea glauca cDNA clone...    40   2e-07  3
(DV990823) GQ0254a.B7_E06 GQ025: Annual flush SHOOTS diurnal...    40   2e-07  3
(FD737248) WS03941.C21.1_C09 SS-B-24 Picea sitchensis cDNA c...    40   2e-07  3
(DR538162) WS0276.B21_C21 SS-IL-A-FL-14 Picea sitchensis cDN...    40   2e-07  3
(DV976151) GQ0065.B3_G02 GQ006: Cambium and phloem from matu...    40   2e-07  3
(EX328149) GQ02828.B7_G20 GQ028 - Cambium / phloem scrapping...    40   2e-07  3
(EX362140) GQ03205.B7_J22 GQ032 - Shoot tip (Normalized libr...    40   2e-07  3
(DV991927) GQ02511.B3_N07 GQ025: Annual flush SHOOTS diurnal...    40   2e-07  3
(EX436971) GQ04003.B7_P17 GQ040 - Shoot tip - Active growth ...    40   2e-07  3
(ES863575) WS027100.CR_I10 SS-IL-A-FL-14 Picea sitchensis cD...    40   2e-07  3
(DV977901) GQ0069.B3_O01 GQ006: Cambium and phloem from matu...    40   2e-07  3
(EX433386) GQ03913.B7_D10 GQ039 - Stem - Dormant Picea glauc...    40   2e-07  3
(DV975959) GQ0069.TB_O01 GQ006: Cambium and phloem from matu...    40   2e-07  3
(DV992129) GQ0258.B7_E15 GQ025: Annual flush SHOOTS diurnal ...    40   2e-07  3
(DR524743) WS02718.B21_B23 SS-IL-A-FL-14 Picea sitchensis cD...    40   2e-07  3
(DR552433) WS03223.C21_C23 WS-MC-N-A-20 Picea glauca cDNA cl...    40   2e-07  3
(ES867410) WS02798.CR_O11 SS-IL-A-FL-14 Picea sitchensis cDN...    40   2e-07  3
(EX305850) GQ01301.B7_G07 GQ013 - Elongating ROOTS tips - sa...    40   2e-07  3

>(U67838) Dictyostelium discoideum putative ubiquitin conjugating
           enzyme UbcB (ubcB) gene, complete cds.
          Length = 665

 Score = 1041 bits (525), Expect(2) = 0.0
 Identities = 525/525 (100%)
 Strand = Plus / Plus


Query: 87  aataaatagataatttgtataacagaaacaaaataatggcagctcacaaacgtttacaaa 146
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 109 aataaatagataatttgtataacagaaacaaaataatggcagctcacaaacgtttacaaa 168


Query: 147 aagaaatcaccgatatgctcaaaactccaccatcatggtgttcagctcatcttgtagatg 206
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 169 aagaaatcaccgatatgctcaaaactccaccatcatggtgttcagctcatcttgtagatg 228


Query: 207 ataatttacaaaaatggaaagcaactgttcaaggaccagaaggatctccattcgaaaaag 266
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 229 ataatttacaaaaatggaaagcaactgttcaaggaccagaaggatctccattcgaaaaag 288


Query: 267 gtgtatttagtatggatattgatattccagctgattatccattcaaaccaccaacattaa 326
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 289 gtgtatttagtatggatattgatattccagctgattatccattcaaaccaccaacattaa 348


Query: 327 aatttacaactaaaatctatcatccaaatattaaaacatctgatggagcaatttgtgcag 386
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 349 aatttacaactaaaatctatcatccaaatattaaaacatctgatggagcaatttgtgcag 408


Query: 387 aagtattctcaacatggagtcctcaattaaagattcttgatgttcttacaacaattcgtt 446
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 409 aagtattctcaacatggagtcctcaattaaagattcttgatgttcttacaacaattcgtt 468


Query: 447 caattcttactgatccaaacccagataatcctttggaaactgaaatcgctcaacaattca 506
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 469 caattcttactgatccaaacccagataatcctttggaaactgaaatcgctcaacaattca 528


Query: 507 aaactgatagaaatgcattcaataaaaccgccaaagaatggactaaaaaatatgccaagt 566
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 529 aaactgatagaaatgcattcaataaaaccgccaaagaatggactaaaaaatatgccaagt 588


Query: 567 aaaaacgcgattttaatggtatatgtgagaagatagaaatagaaa 611
           |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 589 aaaaacgcgattttaatggtatatgtgagaagatagaaatagaaa 633

 Score = 46.1 bits (23), Expect(2) = 0.0
 Identities = 23/23 (100%)
 Strand = Plus / Plus


Query: 57  caaacacacaaacacataaaaac 79
           |||||||||||||||||||||||
Sbjct: 79  caaacacacaaacacataaaaac 101

Lambda     K      H
    1.37    0.711     1.31

Matrix: blastn matrix:1 -3
Number of Sequences: 92845959
Number of Hits to DB: 720,063,863
Number of extensions: 43219006
Number of successful extensions: 3697056
Number of sequences better than 10.0: 2964
Length of query: 611
Length of database: 95,242,211,685
Length adjustment: 23
Effective length of query: 588
Effective length of database: 93,106,754,628
Effective search space: 54746771721264
Effective search space used: 54746771721264
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)
protein update 2009. 7.13
Homology vs Protein 
Query= Contig-U15039-1 (Contig-U15039-1Q) /CSM_Contig/Contig-U15039-1Q.Seq.d
         (611 letters)

Database: nrp_B
           3,236,559 sequences; 1,051,180,864 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U67838_1(U67838|pid:none) Dictyostelium discoideum putative ubiq...   311   9e-84
AM494971_122(AM494971|pid:none) Leishmania braziliensis chromoso...   169   4e-41
EU244369_1(EU244369|pid:none) Haliotis diversicolor clone HDr4CJ...   168   1e-40
BC155782_1(BC155782|pid:none) Danio rerio zgc:56340, mRNA (cDNA ...   167   2e-40
AE017346_284(AE017346|pid:none) Cryptococcus neoformans var. neo...   167   2e-40
BC142569_1(BC142569|pid:none) Xenopus laevis ubiquitin conjugati...   166   4e-40
AC159432_15(AC159432|pid:none) Trypanosoma brucei chromosome 5 c...   166   4e-40
BC047863_1(BC047863|pid:none) Danio rerio zgc:56340, mRNA (cDNA ...   166   4e-40
AK095822_1(AK095822|pid:none) Homo sapiens cDNA FLJ38503 fis, cl...   166   4e-40
BC076728_1(BC076728|pid:none) Xenopus laevis ubiquitin-conjugati...   166   5e-40
AM181595_1(AM181595|pid:none) Oesophagostomum dentatum mRNA for ...   166   5e-40
(P35129) RecName: Full=Ubiquitin-conjugating enzyme E2 2;       ...   166   6e-40
BC059548_1(BC059548|pid:none) Danio rerio ubiquitin-conjugating ...   165   8e-40
(P61077) RecName: Full=Ubiquitin-conjugating enzyme E2 D3;      ...   165   8e-40
AM920435_793(AM920435|pid:none) Penicillium chrysogenum Wisconsi...   165   8e-40
(Q06AA9) RecName: Full=Ubiquitin-conjugating enzyme E2 D2;      ...   165   1e-39
(P25867) RecName: Full=Ubiquitin-conjugating enzyme E2-17 kDa;  ...   164   1e-39
BT057031_1(BT057031|pid:none) Salmo salar clone ssal-evd-502-245...   164   1e-39
BC066917_1(BC066917|pid:none) Homo sapiens ubiquitin-conjugating...   164   1e-39
(O74196) RecName: Full=Ubiquitin-conjugating enzyme E2-16 kDa;  ...   164   2e-39
I59365(I59365) ubiquitin conjugating enzyme - human  &L40146_1(L...   164   2e-39
AM181594_1(AM181594|pid:none) Oesophagostomum dentatum mRNA for ...   164   2e-39
AK009276_1(AK009276|pid:none) Mus musculus adult male tongue cDN...   164   2e-39
(Q3ZCF7) RecName: Full=Ubiquitin-conjugating enzyme E2 D3;      ...   164   2e-39
CP000881_158(CP000881|pid:none) Hemiselmis andersenii chromosome...   164   2e-39
(P46595) RecName: Full=Ubiquitin-conjugating enzyme E2 4;       ...   164   2e-39
BC048896_1(BC048896|pid:none) Danio rerio zgc:55886, mRNA (cDNA ...   164   2e-39
AK152231_1(AK152231|pid:none) Mus musculus bone marrow macrophag...   164   2e-39
BT079155_1(BT079155|pid:none) Esox lucius clone eluc-evq-525-194...   164   2e-39
(P15732) RecName: Full=Ubiquitin-conjugating enzyme E2-16 kDa;  ...   164   2e-39
BT075389_1(BT075389|pid:none) Osmerus mordax clone omor-eva-513-...   163   3e-39
DQ228113_4(DQ228113|pid:none) Hanusia phi strain CCMP325 18S rib...   163   3e-39
BT056835_1(BT056835|pid:none) Salmo salar clone ssal-plnb-027-15...   163   3e-39
(P51668) RecName: Full=Ubiquitin-conjugating enzyme E2 D1;      ...   163   4e-39
AP007167_66(AP007167|pid:none) Aspergillus oryzae RIB40 genomic ...   163   4e-39
BT082300_1(BT082300|pid:none) Anoplopoma fimbria clone afim-evh-...   163   4e-39
BT077825_1(BT077825|pid:none) Lepeophtheirus salmonis Pacific fo...   163   4e-39
AX406018_1(AX406018|pid:none) Sequence 433 from Patent WO0222660.     163   4e-39
BT057415_1(BT057415|pid:none) Salmo salar clone ssal-eve-568-290...   163   4e-39
BC055599_1(BC055599|pid:none) Danio rerio zgc:66323, mRNA (cDNA ...   162   7e-39
EU957802_1(EU957802|pid:none) Zea mays clone 1623065 ubiquitin-c...   162   9e-39
(P15731) RecName: Full=Ubiquitin-conjugating enzyme E2 4;       ...   161   2e-38
AM427228_1(AM427228|pid:none) Vitis vinifera contig VV78X183533....   161   2e-38
CR382130_616(CR382130|pid:none) Yarrowia lipolytica strain CLIB1...   161   2e-38
EU586201_1(EU586201|pid:none) Malus x domestica cultivar Fuji ub...   160   2e-38
DQ228115_1(DQ228115|pid:none) Proteomonas sulcata strain CCMP704...   160   3e-38
BT070291_1(BT070291|pid:none) Picea sitchensis clone WS02718_B23...   160   3e-38
(P35134) RecName: Full=Ubiquitin-conjugating enzyme E2 11;      ...   160   3e-38
BT046784_1(BT046784|pid:none) Salmo salar clone ssal-eve-547-308...   160   3e-38
EU960465_1(EU960465|pid:none) Zea mays clone 225114 ubiquitin-co...   159   5e-38
FN392321_727(FN392321|pid:none) Pichia pastoris GS115 chromosome...   159   5e-38
GM966533_1(GM966533|pid:none) Sequence 1865 from Patent WO200814...   159   5e-38
CR382125_546(CR382125|pid:none) Kluyveromyces lactis strain NRRL...   159   5e-38
AY813067_1(AY813067|pid:none) Schistosoma japonicum SJCHGC00720 ...   159   5e-38
DQ027023_1(DQ027023|pid:none) Arabidopsis thaliana ubiquitinatin...   159   5e-38
AB074411_1(AB074411|pid:none) Oryza sativa Japonica Group mRNA f...   159   5e-38
EU972165_1(EU972165|pid:none) Zea mays clone 376667 ubiquitin-co...   159   6e-38
EF146072_1(EF146072|pid:none) Populus trichocarpa clone WS0115_F...   159   6e-38
AF161722_1(AF161722|pid:none) Magnaporthe grisea ubiquitin-conju...   159   8e-38
AF325019_1(AF325019|pid:none) Arabidopsis thaliana AT4g27960 (AT...   159   8e-38
CR940352_416(CR940352|pid:none) Theileria annulata strain Ankara...   159   8e-38
(P35132) RecName: Full=SUMO-conjugating enzyme UBC9;          EC...   159   8e-38
CR380951_194(CR380951|pid:none) Candida glabrata strain CBS138 c...   158   1e-37
EU593895_1(EU593895|pid:none) Brassica napus E2 ubiquitin-conjug...   158   1e-37
AY736121_1(AY736121|pid:none) Triticum aestivum ubiquitin-conjug...   158   1e-37
(P35133) RecName: Full=Ubiquitin-conjugating enzyme E2 10;      ...   158   1e-37
AK059627_1(AK059627|pid:none) Oryza sativa Japonica Group cDNA c...   158   1e-37
GM966539_1(GM966539|pid:none) Sequence 1871 from Patent WO200814...   157   2e-37
BT053431_1(BT053431|pid:none) Medicago truncatula clone MTYFP_FQ...   157   2e-37
EF147515_1(EF147515|pid:none) Populus trichocarpa clone WS0123_B...   157   2e-37
FM992695_868(FM992695|pid:none) Candida dubliniensis CD36 chromo...   157   2e-37
EU853458_1(EU853458|pid:none) Cucumis melo var. cantalupensis ub...   157   2e-37
(Q94F47) RecName: Full=Ubiquitin carrier protein E2 28;         ...   157   3e-37
(P43102) RecName: Full=Ubiquitin-conjugating enzyme E2 4;       ...   156   4e-37
(Q9FKT3) RecName: Full=Ubiquitin carrier protein E2 30;         ...   156   4e-37
BT034602_1(BT034602|pid:none) Zea mays full-length cDNA clone ZM...   156   4e-37
AF034946_1(AF034946|pid:none) Zea mays ubiquitin conjugating enz...   156   4e-37
(P35135) RecName: Full=Ubiquitin-conjugating enzyme E2-17 kDa;  ...   156   4e-37
AP003446_10(AP003446|pid:none) Oryza sativa Japonica Group genom...   156   5e-37
AM464235_1(AM464235|pid:none) Vitis vinifera contig VV78X153506....   156   5e-37
AY082009_1(AY082009|pid:none) Gossypium thurberi ubiquitin-conju...   156   5e-37
AY082005_1(AY082005|pid:none) Gossypium hirsutum ubiquitin-conju...   156   5e-37
(P35131) RecName: Full=Ubiquitin-conjugating enzyme E2 8;       ...   156   5e-37
EF144962_1(EF144962|pid:none) Populus trichocarpa clone WS0111_C...   156   5e-37
DQ222513_1(DQ222513|pid:none) Solanum tuberosum clone 117E03 ubi...   156   5e-37
BT034735_1(BT034735|pid:none) Zea mays full-length cDNA clone ZM...   156   5e-37
EF145004_1(EF145004|pid:none) Populus trichocarpa clone WS0111_H...   155   7e-37
AY489135_1(AY489135|pid:none) Capsicum annuum ubiquitin-conjugat...   155   7e-37
EU976228_1(EU976228|pid:none) Zea mays clone 688590 ubiquitin-co...   155   7e-37
EU586200_1(EU586200|pid:none) Malus x domestica cultivar Fuji ub...   155   7e-37
BT070302_1(BT070302|pid:none) Picea sitchensis clone WS02719_E19...   155   1e-36
DQ207855_1(DQ207855|pid:none) Solanum tuberosum clone 078A09 ubi...   154   1e-36
AF424641_1(AF424641|pid:none) Phytophthora infestans clone MY-03...   154   1e-36
DQ144988_1(DQ144988|pid:none) Symbiodinium sp. C3 ubiquitin conj...   154   2e-36
AC148404_22(AC148404|pid:none) Medicago truncatula clone mth2-28...   154   2e-36
(Q9NTT1) Putative ubiquitin-conjugating enzyme E2 D3-like protei...   154   2e-36
AC007764_2(AC007764|pid:none) Genomic sequence for Arabidopsis t...   154   2e-36
AB074412_1(AB074412|pid:none) Oryza sativa Japonica Group mRNA f...   154   2e-36
AY082004_1(AY082004|pid:none) Gossypium hirsutum ubiquitin-conju...   153   3e-36
AY220735_1(AY220735|pid:none) Hordeum vulgare ubiquitin-conjugat...   152   6e-36
AL672098_4(AL672098|pid:none) Mouse DNA sequence from clone RP23...   152   7e-36
BT070503_1(BT070503|pid:none) Picea sitchensis clone WS02732_O01...   152   9e-36
AP008208_133(AP008208|pid:none) Oryza sativa (japonica cultivar-...   152   9e-36
CP001326_415(CP001326|pid:none) Micromonas sp. RCC299 chromosome...   152   9e-36
EF085158_1(EF085158|pid:none) Picea sitchensis clone WS0285_M23 ...   151   1e-35
BT040054_1(BT040054|pid:none) Zea mays full-length cDNA clone ZM...   151   2e-35
AF001948_1(AF001948|pid:none) Pinus resinosa putative ubiquitin ...   150   4e-35
GM966541_1(GM966541|pid:none) Sequence 1873 from Patent WO200814...   149   5e-35
BC109525_1(BC109525|pid:none) Bos taurus ubiquitin-conjugating e...   149   6e-35
AM270022_37(AM270022|pid:none) Aspergillus niger contig An02c027...   147   2e-34
BC048523_1(BC048523|pid:none) Mus musculus predicted gene, EG237...   147   3e-34
GM966535_1(GM966535|pid:none) Sequence 1867 from Patent WO200814...   146   4e-34
(Q9C9Y7) RecName: Full=Probable ubiquitin-conjugating enzyme E2 ...   146   4e-34
BT061792_1(BT061792|pid:none) Zea mays full-length cDNA clone ZM...   146   4e-34
AF461687_1(AF461687|pid:none) Pinus pinaster putative ubiquitin ...   146   4e-34
CR940347_494(CR940347|pid:none) Theileria annulata strain Ankara...   146   5e-34
(Q9SLE4) RecName: Full=Ubiquitin carrier protein E2 29;         ...   145   9e-34
EU963040_1(EU963040|pid:none) Zea mays clone 256705 ubiquitin-co...   145   9e-34
BT079919_1(BT079919|pid:none) Esox lucius clone eluc-evq-517-214...   144   3e-33
BT057192_1(BT057192|pid:none) Salmo salar clone ssal-eve-549-287...   144   3e-33
BT057585_1(BT057585|pid:none) Salmo salar clone ssal-eve-534-384...   144   3e-33
AM910993_147(AM910993|pid:none) Plasmodium knowlesi strain H chr...   143   3e-33
AB105548_1(AB105548|pid:none) Xenopus laevis Xubc15 mRNA for ubi...   143   4e-33
AJ843120_1(AJ843120|pid:none) Plantago major mRNA for Ubiquitin-...   142   6e-33
AL844509_547(AL844509|pid:none) Plasmodium falciparum 3D7 chromo...   142   6e-33
BT074238_1(BT074238|pid:none) Oncorhynchus mykiss clone omyk-evo...   142   7e-33
BT045620_1(BT045620|pid:none) Salmo salar clone ssal-rgf-526-297...   142   1e-32
BC042331_1(BC042331|pid:none) Danio rerio ubiquitin-conjugating ...   142   1e-32
AB172309_1(AB172309|pid:none) Macaca fascicularis brain cDNA clo...   141   1e-32
AY891186_1(AY891186|pid:none) Synthetic construct Homo sapiens c...   141   1e-32
BT045559_1(BT045559|pid:none) Salmo salar clone ssal-rgf-524-350...   141   1e-32
BT043519_1(BT043519|pid:none) Salmo salar clone HM4_1156 ubiquit...   141   1e-32
AY281323_1(AY281323|pid:none) Xenopus laevis ubiquitin-conjugati...   141   1e-32
BT074069_1(BT074069|pid:none) Oncorhynchus mykiss clone omyk-evo...   141   1e-32
BT056474_1(BT056474|pid:none) Salmo salar clone ssal-evd-521-050...   141   1e-32
(P52483) RecName: Full=Ubiquitin-conjugating enzyme E2 E3;      ...   141   1e-32
(Q96LR5) RecName: Full=Ubiquitin-conjugating enzyme E2 E2;      ...   141   2e-32
DQ972954_1(DQ972954|pid:none) Sus scrofa UB2E2 mRNA, complete cds.    141   2e-32
BC082838_1(BC082838|pid:none) Xenopus laevis hypothetical LOC494...   141   2e-32
AY083611_1(AY083611|pid:none) Oryza sativa elicitor and UV light...   141   2e-32
(Q91W82) RecName: Full=Ubiquitin-conjugating enzyme E2 E2;      ...   141   2e-32
BT074151_1(BT074151|pid:none) Oncorhynchus mykiss clone omyk-evo...   141   2e-32
BC077923_1(BC077923|pid:none) Xenopus laevis hypothetical LOC494...   140   2e-32
BC079134_1(BC079134|pid:none) Rattus norvegicus ubiquitin-conjug...   140   3e-32
BC099169_1(BC099169|pid:none) Rattus norvegicus ubiquitin-conjug...   140   3e-32
CR548612_215(CR548612|pid:none) Paramecium tetraurelia macronucl...   140   3e-32
BC061394_1(BC061394|pid:none) Xenopus tropicalis ubiquitin-conju...   140   3e-32
BT074944_1(BT074944|pid:none) Osmerus mordax clone omor-rgc-511-...   140   4e-32
FN392322_448(FN392322|pid:none) Pichia pastoris GS115 chromosome...   140   4e-32
BT075359_1(BT075359|pid:none) Osmerus mordax clone omor-eva-519-...   140   4e-32
AM920433_118(AM920433|pid:none) Penicillium chrysogenum Wisconsi...   139   6e-32
AY814691_1(AY814691|pid:none) Schistosoma japonicum SJCHGC02747 ...   139   8e-32
AE017344_202(AE017344|pid:none) Cryptococcus neoformans var. neo...   138   1e-31
FN357441_2(FN357441|pid:none) Schistosoma mansoni genome sequenc...   138   1e-31
AY811864_1(AY811864|pid:none) Schistosoma japonicum SJCHGC02746 ...   138   1e-31
DQ480743_1(DQ480743|pid:none) Rattus norvegicus clone ZX34 unkno...   137   2e-31
CR382129_20(CR382129|pid:none) Yarrowia lipolytica strain CLIB12...   137   3e-31
(Q9LJD7) RecName: Full=Constitutive photomorphogenesis protein 1...   136   4e-31
L00641_1(L00641|pid:none) Arabidopsis thaliana ubiquitin conjuga...   136   5e-31
BT046386_1(BT046386|pid:none) Salmo salar clone ssal-eve-564-281...   134   2e-30
S61417(S61417;S61418;S72311)ubiquitin-protein ligase (EC 6.3.2.1...   134   2e-30
AE017343_517(AE017343|pid:none) Cryptococcus neoformans var. neo...   134   3e-30
EF576159_1(EF576159|pid:none) Oryza sativa (indica cultivar-grou...   134   3e-30
AE014296_727(AE014296|pid:none) Drosophila melanogaster chromoso...   133   5e-30
(P52485) RecName: Full=Ubiquitin-conjugating enzyme E2-24 kDa;  ...   133   5e-30
EU170471_1(EU170471|pid:none) Eucommia ulmoides ubiquitin conjug...   132   6e-30
CP000497_294(CP000497|pid:none) Pichia stipitis CBS 6054 chromos...   132   8e-30
DQ284472_1(DQ284472|pid:none) Solanum tuberosum clone 116D11 ubi...   132   8e-30
CU638744_764(CU638744|pid:none) Podospora anserina genomic DNA c...   132   8e-30
(P21734) RecName: Full=Ubiquitin-conjugating enzyme E2-24 kDa;  ...   132   8e-30
FN357511_11(FN357511|pid:none) Schistosoma mansoni genome sequen...   131   2e-29
BT078441_1(BT078441|pid:none) Lepeophtheirus salmonis Pacific fo...   131   2e-29
U15971_1(U15971|pid:none) Oryza sativa ubiquitin conjugating enz...   130   2e-29
CU633899_608(CU633899|pid:none) Podospora anserina genomic DNA c...   130   3e-29
CR954205_509(CR954205|pid:none) Ostreococcus tauri strain OTTH05...   130   3e-29
(O74810) RecName: Full=Ubiquitin-conjugating enzyme E2 1;       ...   130   4e-29
BT071650_1(BT071650|pid:none) Picea sitchensis clone WS0294_N24 ...   130   4e-29
AE017344_267(AE017344|pid:none) Cryptococcus neoformans var. neo...   129   5e-29
AM998844_1(AM998844|pid:none) Drosophila melanogaster CG2574 gen...   129   5e-29
CR380953_344(CR380953|pid:none) Candida glabrata strain CBS138 c...   129   5e-29
AY389716_1(AY389716|pid:none) Hyacinthus orientalis ubiquitin-co...   129   7e-29
AY826156_1(AY826156|pid:none) Aedes albopictus clone AL_265 ubiq...   129   7e-29
AM920437_2378(AM920437|pid:none) Penicillium chrysogenum Wiscons...   129   7e-29
AE014298_1840(AE014298|pid:none) Drosophila melanogaster chromos...   128   1e-28
AM270282_9(AM270282|pid:none) Aspergillus niger contig An12c0260...   128   1e-28
AC146747_17(AC146747|pid:none) Medicago truncatula clone mth2-14...   128   1e-28
(P52490) RecName: Full=Ubiquitin-conjugating enzyme E2 13;      ...   128   1e-28
FM245972_1(FM245972|pid:none) Drosophila melanogaster CG2574 gen...   128   1e-28
AM998840_1(AM998840|pid:none) Drosophila melanogaster CG2574 gen...   128   1e-28
(Q9UTN8) RecName: Full=Ubiquitin-conjugating enzyme E2 14;      ...   127   2e-28
FJ168552_19(FJ168552|pid:none) Bodo saltans clone fosmid 45A12, ...   127   2e-28
AP007166_113(AP007166|pid:none) Aspergillus oryzae RIB40 genomic...   127   2e-28
EU975744_1(EU975744|pid:none) Zea mays clone 499094 ubiquitin-co...   127   2e-28
AE017345_391(AE017345|pid:none) Cryptococcus neoformans var. neo...   127   3e-28
FN357511_14(FN357511|pid:none) Schistosoma mansoni genome sequen...   127   3e-28
AF136176_1(AF136176|pid:none) Homo sapiens ubiquitin-conjugating...   126   4e-28
AE014134_240(AE014134|pid:none) Drosophila melanogaster chromoso...   126   4e-28
EF081861_1(EF081861|pid:none) Picea sitchensis clone WS0294_J10 ...   126   6e-28
CR382137_65(CR382137|pid:none) Debaryomyces hansenii strain CBS7...   126   6e-28
CR382123_805(CR382123|pid:none) Kluyveromyces lactis strain NRRL...   125   7e-28
T14451(T14451) ubiquitin conjugating enzyme, E2 - wild cabbage (...   125   1e-27
AE016820_490(AE016820|pid:none) Ashbya gossypii (= Eremothecium ...   125   1e-27
AP003804_13(AP003804|pid:none) Oryza sativa Japonica Group genom...   125   1e-27
CR382123_762(CR382123|pid:none) Kluyveromyces lactis strain NRRL...   125   1e-27
GM966563_1(GM966563|pid:none) Sequence 1895 from Patent WO200814...   125   1e-27
(Q9NPD8) RecName: Full=Ubiquitin-conjugating enzyme E2 T;       ...   125   1e-27
CU928175_153(CU928175|pid:none) Zygosaccharomyces rouxii strain ...   124   2e-27
DQ848992_1(DQ848992|pid:none) Trachemys scripta ubiquitin-conjug...   124   2e-27
CU640366_482(CU640366|pid:none) Podospora anserina genomic DNA c...   124   2e-27
CU928171_602(CU928171|pid:none) Kluyveromyces thermotolerans str...   124   2e-27
AY542993_1(AY542993|pid:none) Bigelowiella natans ubiquitin conj...   124   3e-27
U66493_1(U66493|pid:none) Metarhizium anisopliae ubiquitin conju...   123   4e-27
BC091621_1(BC091621|pid:none) Xenopus tropicalis ubiquitin-conju...   123   4e-27
(Q9CQ37) RecName: Full=Ubiquitin-conjugating enzyme E2 T;       ...   123   4e-27
AP003022_24(AP003022|pid:none) Oryza sativa Japonica Group genom...   123   4e-27
GM966106_1(GM966106|pid:none) Sequence 1438 from Patent WO200814...   123   4e-27
EU284925_1(EU284925|pid:none) TSA: Elaeis guineensis EgEfMPOB001...   122   6e-27
CU928174_488(CU928174|pid:none) Zygosaccharomyces rouxii strain ...   122   8e-27
AY135219_1(AY135219|pid:none) Pavlova lutheri ubiquitin-conjugat...   122   8e-27
DQ887084_1(DQ887084|pid:none) Arachis hypogaea ubiquitin-conjuga...   122   8e-27
DQ219874_1(DQ219874|pid:none) Bombyx mori ubiquitin-conjugating ...   122   1e-26
FJ411013_1(FJ411013|pid:none) Paecilomyces sp. J18 ubiquitin con...   121   1e-26
FM992692_56(FM992692|pid:none) Candida dubliniensis CD36 chromos...   121   1e-26
CP000585_249(CP000585|pid:none) Ostreococcus lucimarinus CCE9901...   121   2e-26
AK342573_1(AK342573|pid:none) Acyrthosiphon pisum ACYPI004996 mR...   120   2e-26
EF585788_1(EF585788|pid:none) Sonneratia alba isolate Sonn199_1 ...   120   2e-26
EF585789_1(EF585789|pid:none) Sonneratia caseolaris isolate Sonn...   120   3e-26
BT075900_1(BT075900|pid:none) Caligus rogercresseyi clone crog-e...   120   3e-26
BT071782_1(BT071782|pid:none) Picea sitchensis clone WS0454_N05 ...   120   3e-26
EF145757_1(EF145757|pid:none) Populus trichocarpa clone WS0113_D...   120   3e-26
CR940347_711(CR940347|pid:none) Theileria annulata strain Ankara...   120   3e-26
EF144666_1(EF144666|pid:none) Populus trichocarpa clone WS01116_...   120   3e-26
EF145085_1(EF145085|pid:none) Populus trichocarpa clone WS01120_...   120   4e-26
GM966108_1(GM966108|pid:none) Sequence 1440 from Patent WO200814...   120   4e-26
GM966545_1(GM966545|pid:none) Sequence 1877 from Patent WO200814...   120   4e-26
GM966112_1(GM966112|pid:none) Sequence 1444 from Patent WO200814...   120   4e-26
AY231898_1(AY231898|pid:none) Drosophila yakuba clone yak-em_eff...   120   4e-26
GM966553_1(GM966553|pid:none) Sequence 1885 from Patent WO200814...   119   5e-26
EF082769_1(EF082769|pid:none) Picea sitchensis clone WS0277_E18 ...   119   5e-26
AE013599_2725(AE013599|pid:none) Drosophila melanogaster chromos...   119   5e-26
GM966102_1(GM966102|pid:none) Sequence 1434 from Patent WO200814...   119   5e-26
DQ443216_1(DQ443216|pid:none) Bombyx mori ubiquitin conjugating ...   119   5e-26
T40123(T40123)ubiquitin-conjugating enzyme - fission yeast  (Sch...   119   7e-26
(Q9C8X7) RecName: Full=Probable ubiquitin carrier protein E2 31;...   119   7e-26
AC150706_14(AC150706|pid:none) Medicago truncatula clone mth2-13...   119   7e-26
GM966557_1(GM966557|pid:none) Sequence 1889 from Patent WO200814...   119   9e-26
DQ284494_1(DQ284494|pid:none) Solanum tuberosum clone 063D04 ubi...   118   1e-25
DQ241834_1(DQ241834|pid:none) Solanum tuberosum clone 180C02 ubi...   118   1e-25
AL139794_13(AL139794|pid:none) Leishmania major Friedlin chromos...   118   1e-25
(Q5R5I4) RecName: Full=Ubiquitin-conjugating enzyme E2 L3;      ...   118   1e-25
AK167847_1(AK167847|pid:none) Mus musculus CRL-1722 L5178Y-R cDN...   118   1e-25
AK005788_1(AK005788|pid:none) Mus musculus adult male testis cDN...   118   2e-25
(Q9FI61) RecName: Full=Ubiquitin carrier protein E2 27;         ...   118   2e-25
AL590449_93(AL590449|pid:none) chromosome X of strain GB-M1 of E...   118   2e-25
BT038939_1(BT038939|pid:none) Zea mays full-length cDNA clone ZM...   117   3e-25
(Q4R4I1) RecName: Full=Ubiquitin-conjugating enzyme E2 N;       ...   117   3e-25
AY826157_1(AY826157|pid:none) Aedes albopictus clone AL_336 ubiq...   117   3e-25
BC077940_1(BC077940|pid:none) Xenopus laevis hypothetical protei...   117   3e-25
AB020746_7(AB020746|pid:none) Arabidopsis thaliana genomic DNA, ...   117   3e-25
CP001323_325(CP001323|pid:none) Micromonas sp. RCC299 chromosome...   117   3e-25
BT079955_1(BT079955|pid:none) Esox lucius clone eluc-evq-507-212...   117   3e-25
AK112003_1(AK112003|pid:none) Oryza sativa Japonica Group cDNA c...   117   3e-25
EU966528_1(EU966528|pid:none) Zea mays clone 295025 ubiquitin-co...   117   3e-25
EU964992_1(EU964992|pid:none) Zea mays clone 283008 ubiquitin-co...   117   3e-25
AF262934_1(AF262934|pid:none) Avicennia marina ubiquitin conjuga...   117   3e-25
BT076385_1(BT076385|pid:none) Caligus rogercresseyi clone crog-e...   117   3e-25
AY542992_1(AY542992|pid:none) Bigelowiella natans ubiquitin conj...   117   3e-25
BT082432_1(BT082432|pid:none) Anoplopoma fimbria clone afim-evh-...   117   3e-25
AK340875_1(AK340875|pid:none) Acyrthosiphon pisum ACYPI005089 mR...   117   3e-25
AK223064_1(AK223064|pid:none) Homo sapiens mRNA for ubiquitin-co...   117   3e-25
(P49459) RecName: Full=Ubiquitin-conjugating enzyme E2 A;       ...   117   3e-25
AK122067_1(AK122067|pid:none) Oryza sativa Japonica Group cDNA c...   117   3e-25
GM966098_1(GM966098|pid:none) Sequence 1430 from Patent WO200814...   117   3e-25
BT074286_1(BT074286|pid:none) Oncorhynchus mykiss clone omyk-evo...   116   4e-25
BC071403_1(BC071403|pid:none) Danio rerio ubiquitin-conjugating ...   116   4e-25
AB026055_1(AB026055|pid:none) Nicotiana tabacum Ntubc1 mRNA for ...   116   4e-25
EU952491_1(EU952491|pid:none) Zea mays clone 1282033 ubiquitin-c...   116   4e-25
AY148222_1(AY148222|pid:none) Sus scrofa E2 ubiquitin-conjugatin...   116   4e-25
BT034341_1(BT034341|pid:none) Zea mays full-length cDNA clone ZM...   116   4e-25
DQ923722_1(DQ923722|pid:none) Litopenaeus vannamei ubiquitin-con...   116   4e-25
DQ294271_1(DQ294271|pid:none) Solanum tuberosum clone 147C03 ubi...   116   4e-25
BT025380_1(BT025380|pid:none) Bos taurus ubiquitin-conjugating e...   116   4e-25
BT073899_1(BT073899|pid:none) Oncorhynchus mykiss clone omyk-evo...   116   6e-25
BT036396_1(BT036396|pid:none) Zea mays full-length cDNA clone ZM...   116   6e-25
CR954205_263(CR954205|pid:none) Ostreococcus tauri strain OTTH05...   116   6e-25
AM494941_87(AM494941|pid:none) Leishmania braziliensis chromosom...   115   7e-25
AK291083_1(AK291083|pid:none) Homo sapiens cDNA FLJ77917 complet...   115   7e-25
BX957246_4(BX957246|pid:none) Zebrafish DNA sequence from clone ...   115   7e-25
EU284823_1(EU284823|pid:none) TSA: Elaeis guineensis EgEfMPOB000...   115   7e-25
AY891220_1(AY891220|pid:none) Synthetic construct Homo sapiens c...   115   7e-25
EU964354_1(EU964354|pid:none) Zea mays clone 278181 ubiquitin-co...   115   7e-25
(P63146) RecName: Full=Ubiquitin-conjugating enzyme E2 B;       ...   115   7e-25
BT063816_1(BT063816|pid:none) Zea mays full-length cDNA clone ZM...   115   1e-24
AK070524_1(AK070524|pid:none) Oryza sativa Japonica Group cDNA c...   115   1e-24
EF144613_1(EF144613|pid:none) Populus trichocarpa clone WS01111_...   115   1e-24
AJ843121_1(AJ843121|pid:none) Plantago major mRNA for Ubiquitin-...   115   1e-24
AK163966_1(AK163966|pid:none) Mus musculus ES cells cDNA, RIKEN ...   115   1e-24
AK341491_1(AK341491|pid:none) Acyrthosiphon pisum ACYPI008318 mR...   115   1e-24
(P61088) RecName: Full=Ubiquitin-conjugating enzyme E2 N;       ...   115   1e-24
AY814197_1(AY814197|pid:none) Schistosoma japonicum SJCHGC02302 ...   115   1e-24
FN313807_1(FN313807|pid:none) Schistosoma japonicum isolate Anhu...   115   1e-24
BT081008_1(BT081008|pid:none) Caligus clemensi clone ccle-evs-50...   115   1e-24
BT048926_1(BT048926|pid:none) Salmo salar clone ssal-evd-504-092...   114   2e-24
BC044461_1(BC044461|pid:none) Danio rerio ubiquitin-conjugating ...   114   2e-24
NRL(1AAK) Ubiquitin conjugating enzyme (EC 6.3.2.19) - Arabidopsis    114   2e-24
(P25865) RecName: Full=Ubiquitin-conjugating enzyme E2 1;       ...   114   2e-24
(P52478) RecName: Full=Ubiquitin-conjugating enzyme E2 1;       ...   114   2e-24
BT030506_1(BT030506|pid:none) Bos taurus ubiquitin-conjugating e...   114   2e-24
BC124718_1(BC124718|pid:none) Danio rerio zgc:153687, mRNA (cDNA...   114   2e-24
BC053797_1(BC053797|pid:none) Xenopus laevis ubiquitin-conjugati...   114   2e-24
DQ217367_1(DQ217367|pid:none) Taeniopygia guttata clone 0058P004...   114   3e-24
BT078532_1(BT078532|pid:none) Lepeophtheirus salmonis Pacific fo...   114   3e-24
AB079798_1(AB079798|pid:none) Oryza sativa Japonica Group OsRad6...   113   4e-24
AK301675_1(AK301675|pid:none) Homo sapiens cDNA FLJ51703 complet...   113   4e-24
(Q9EQX9) RecName: Full=Ubiquitin-conjugating enzyme E2 N;       ...   113   4e-24
AY048267_1(AY048267|pid:none) Arabidopsis thaliana AT5g62540/K19...   113   5e-24
BC053141_1(BC053141|pid:none) Danio rerio ubiquitin-conjugating ...   113   5e-24
AY632078_1(AY632078|pid:none) Clonorchis sinensis ubiquitin-conj...   113   5e-24
CP001331_21(CP001331|pid:none) Micromonas sp. RCC299 chromosome ...   113   5e-24
BC064184_1(BC064184|pid:none) Xenopus tropicalis ubiquitin-conju...   113   5e-24
(Q86K32) RecName: Full=Probable ubiquitin-conjugating enzyme E2 ...   113   5e-24
DQ321735_1(DQ321735|pid:none) Schistosoma mansoni RAD6 mRNA, com...   112   6e-24
FN357687_9(FN357687|pid:none) Schistosoma mansoni genome sequenc...   112   6e-24
AB099076_1(AB099076|pid:none) Bos taurus mRNA for similar to pho...   112   6e-24
EF677016_1(EF677016|pid:none) Picea sitchensis clone WS02760_C17...   112   8e-24
(P42746) RecName: Full=Ubiquitin-conjugating enzyme E2 3;       ...   112   8e-24
AY086775_1(AY086775|pid:none) Arabidopsis thaliana clone 27602 m...   112   8e-24
U00035_7(U00035|pid:none) Caenorhabditis elegans cosmid R01H2, c...   112   8e-24
AM920430_97(AM920430|pid:none) Penicillium chrysogenum Wisconsin...   112   8e-24
BT072278_1(BT072278|pid:none) Salmo salar clone ssal-rgf-519-255...   112   8e-24
BT079170_1(BT079170|pid:none) Esox lucius clone eluc-evq-509-269...   112   8e-24
AC003974_7(AC003974|pid:none) Arabidopsis thaliana chromosome 2 ...   112   1e-23
DQ115345_1(DQ115345|pid:none) Caenorhabditis remanei ubiquitin-c...   112   1e-23
AC122726_25(AC122726|pid:none) Medicago truncatula clone mth2-23...   112   1e-23
AY223038_1(AY223038|pid:none) Schistosoma japonicum SJCHGC01675 ...   112   1e-23
BT077888_1(BT077888|pid:none) Lepeophtheirus salmonis Pacific fo...   112   1e-23
AK317108_1(AK317108|pid:none) Arabidopsis thaliana AT3G13550 mRN...   112   1e-23
D78372_1(D78372|pid:none) Neurospora crassa DNA for mus-8, compl...   111   2e-23
BC086816_1(BC086816|pid:none) Danio rerio ubiquitin-conjugating ...   111   2e-23
DQ200366_1(DQ200366|pid:none) Solanum tuberosum clone 055E08 ubi...   111   2e-23
BT043711_1(BT043711|pid:none) Salmo salar clone HM5_2704 ubiquit...   111   2e-23
AF132073_1(AF132073|pid:none) Sus scrofa RAD6 homolog (PHR6A) ge...   110   2e-23
AK295354_1(AK295354|pid:none) Homo sapiens cDNA FLJ52264 complet...   110   2e-23
CU638744_485(CU638744|pid:none) Podospora anserina genomic DNA c...   110   2e-23
CR761899_1(CR761899|pid:none) Xenopus tropicalis finished cDNA, ...   110   2e-23
BC074688_1(BC074688|pid:none) Xenopus tropicalis ubiquitin-conju...   110   3e-23
BC056724_1(BC056724|pid:none) Danio rerio ubiquitin-conjugating ...   110   3e-23
BT078648_1(BT078648|pid:none) Lepeophtheirus salmonis Pacific fo...   110   3e-23
AF026506_1(AF026506|pid:none) Drosophila silvestris ubiquitin-co...   110   3e-23
AK299985_1(AK299985|pid:none) Homo sapiens cDNA FLJ59750 complet...   110   3e-23
EF095146_1(EF095146|pid:none) Homarus americanus ubiquitin-conju...   110   4e-23
BT078448_1(BT078448|pid:none) Lepeophtheirus salmonis Pacific fo...   110   4e-23
AF132074_1(AF132074|pid:none) Equus caballus RAD6 homolog (EHR6A...   109   5e-23
AK166647_1(AK166647|pid:none) Mus musculus 1 cell embryo 1 cell ...   109   5e-23
AB011081_1(AB011081|pid:none) Mus musculus mRNA for huntingtin i...   109   5e-23
AF132075_1(AF132075|pid:none) Bos taurus RAD6 homolog (BHR6A) ge...   109   5e-23
AJ720771_1(AJ720771|pid:none) Gallus gallus mRNA for hypothetica...   109   5e-23
FN373925_1(FN373925|pid:none) Schistosoma mansoni genome sequenc...   109   7e-23
BT076412_1(BT076412|pid:none) Caligus rogercresseyi clone crog-e...   109   7e-23
CR382131_195(CR382131|pid:none) Yarrowia lipolytica strain CLIB1...   109   7e-23
BT081488_1(BT081488|pid:none) Rana catesbeiana clone rcat-evr-52...   109   7e-23
CR954214_340(CR954214|pid:none) Ostreococcus tauri strain OTTH05...   108   9e-23
AB079872_1(AB079872|pid:none) Bombyx mori BmubcD4 gene for ubiqu...   108   9e-23
BT048397_1(BT048397|pid:none) Salmo salar clone ssal-evd-501-143...   108   9e-23
BT078888_1(BT078888|pid:none) Esox lucius clone eluc-evq-513-210...   108   1e-22
CU640366_966(CU640366|pid:none) Podospora anserina genomic DNA c...   108   1e-22
(Q58FS2) RecName: Full=Ubiquitin-conjugating enzyme E2 2;       ...   108   2e-22
AY814405_1(AY814405|pid:none) Schistosoma japonicum SJCHGC06418 ...   108   2e-22
BT073663_1(BT073663|pid:none) Oncorhynchus mykiss clone omyk-evn...   108   2e-22
U51051_1(U51051|pid:none) Drosophila melanogaster ubiquitin conj...   107   2e-22
DQ067322_1(DQ067322|pid:none) Caenorhabditis remanei strain EM46...   107   2e-22
(Q6C093) RecName: Full=Ubiquitin-conjugating enzyme E2 2;       ...   107   2e-22
AF419316_1(AF419316|pid:none) Bos taurus RAD6-like protein HR6A ...   107   2e-22
(P52493) RecName: Full=Ubiquitin-conjugating enzyme E2 2;       ...   107   2e-22
CP000500_524(CP000500|pid:none) Pichia stipitis CBS 6054 chromos...   107   3e-22
(Q6FR76) RecName: Full=Ubiquitin-conjugating enzyme E2 2;       ...   107   3e-22
EF585864_1(EF585864|pid:none) Sonneratia alba isolate Sonn402_1 ...   107   3e-22
CP000497_219(CP000497|pid:none) Pichia stipitis CBS 6054 chromos...   107   3e-22
AE016818_302(AE016818|pid:none) Ashbya gossypii (= Eremothecium ...   107   3e-22
BX957246_5(BX957246|pid:none) Zebrafish DNA sequence from clone ...   107   3e-22
BX957246_6(BX957246|pid:none) Zebrafish DNA sequence from clone ...   107   3e-22
CU928180_571(CU928180|pid:none) Kluyveromyces thermotolerans str...   107   3e-22
(Q6BU36) RecName: Full=Ubiquitin-conjugating enzyme E2 2;       ...   106   5e-22
(Q4WLA7) RecName: Full=Ubiquitin-conjugating enzyme E2 2;       ...   106   6e-22
(P52486) RecName: Full=Ubiquitin-conjugating enzyme E2-22 kDa;  ...   106   6e-22
AE014134_2590(AE014134|pid:none) Drosophila melanogaster chromos...   106   6e-22
CU928175_205(CU928175|pid:none) Zygosaccharomyces rouxii strain ...   105   8e-22
AY389584_1(AY389584|pid:none) Hyacinthus orientalis ubiquitin-co...   105   8e-22
T08465(T08465) ubiquitin-protein ligase (EC 6.3.2.19) - fruit fl...   105   1e-21
AJ298327_1(AJ298327|pid:none) Platichthys flesus partial mRNA fo...   105   1e-21
AX887984_1(AX887984|pid:none) Sequence 3847 from Patent EP1033401.    105   1e-21
(Q96UP5) RecName: Full=Ubiquitin-conjugating enzyme E2 2;       ...   105   1e-21
(P42749) RecName: Full=Ubiquitin-conjugating enzyme E2 5;       ...   105   1e-21
EF585865_1(EF585865|pid:none) Sonneratia caseolaris isolate Sonn...   105   1e-21
FN392321_798(FN392321|pid:none) Pichia pastoris GS115 chromosome...   104   2e-21
CR382121_465(CR382121|pid:none) Kluyveromyces lactis strain NRRL...   104   2e-21
(P42748) RecName: Full=Ubiquitin-conjugating enzyme E2 4;       ...   104   2e-21
GM966114_1(GM966114|pid:none) Sequence 1446 from Patent WO200814...   104   2e-21
T16646(T16646)hypothetical protein R01H2.6 - Caenorhabditis eleg...   104   2e-21
AY231700_1(AY231700|pid:none) Drosophila yakuba clone yak-em_Ubc...   103   3e-21
CR382128_138(CR382128|pid:none) Yarrowia lipolytica strain CLIB1...   103   3e-21
EU586199_1(EU586199|pid:none) Malus x domestica cultivar Fuji ub...   103   4e-21
BT081597_1(BT081597|pid:none) Rana catesbeiana clone rcat-evr-53...   103   4e-21
AM435654_1(AM435654|pid:none) Vitis vinifera contig VV78X069434....   103   4e-21
EF585866_1(EF585866|pid:none) Sonneratia ovata isolate Sonn402_3...   103   5e-21
CR380959_147(CR380959|pid:none) Candida glabrata strain CBS138 c...   103   5e-21
AP007164_336(AP007164|pid:none) Aspergillus oryzae RIB40 genomic...   103   5e-21
S43786(S43786;S48898)ubiquitin-protein ligase (EC 6.3.2.19) - Ar...   102   7e-21
EF148791_1(EF148791|pid:none) Populus trichocarpa x Populus delt...   102   7e-21
(Q4PFA5) RecName: Full=Ubiquitin-conjugating enzyme E2 2;       ...   102   9e-21
S43784(S43784;S48896)ubiquitin-protein ligase (EC 6.3.2.19) - Ar...   102   9e-21
(A5PJC4) RecName: Full=Ubiquitin/ISG15-conjugating enzyme E2 L6;...   102   9e-21
A96663(A96663) hypothetical protein T12P18.18 [imported] - Arabi...   102   1e-20
AY223405_1(AY223405|pid:none) Schistosoma japonicum clone ZZZ337...   102   1e-20
(P28263) RecName: Full=Ubiquitin-conjugating enzyme E2-24 kDa;  ...   102   1e-20
AK316720_1(AK316720|pid:none) Arabidopsis thaliana AT5G41700 mRN...   102   1e-20
FN317049_1(FN317049|pid:none) Schistosoma japonicum isolate Anhu...   102   1e-20
CU928180_286(CU928180|pid:none) Kluyveromyces thermotolerans str...   101   1e-20
(Q553F3) RecName: Full=Ubiquitin-conjugating enzyme E2 2;       ...   101   2e-20
FN392321_367(FN392321|pid:none) Pichia pastoris GS115 chromosome...   101   2e-20
FM992695_813(FM992695|pid:none) Candida dubliniensis CD36 chromo...   100   2e-20
FN357392_23(FN357392|pid:none) Schistosoma mansoni genome sequen...   100   2e-20
BT081065_1(BT081065|pid:none) Caligus clemensi clone ccle-evs-51...   100   2e-20
AC159413_39(AC159413|pid:none) Trypanosoma brucei chromosome 7 c...   100   3e-20
FN317000_1(FN317000|pid:none) Schistosoma japonicum isolate Anhu...   100   3e-20
AM270182_7(AM270182|pid:none) Aspergillus niger contig An08c0270...   100   4e-20
AY221464_1(AY221464|pid:none) Ovis aries UbcH5B mRNA, partial cds.    100   4e-20
BT036939_1(BT036939|pid:none) Zea mays full-length cDNA clone ZM...   100   6e-20
EF585867_1(EF585867|pid:none) Sonneratia apetala isolate Sonn402...   100   6e-20
AM989984_46(AM989984|pid:none) Zygosaccharomyces rouxii strain C...   100   6e-20
CR382128_835(CR382128|pid:none) Yarrowia lipolytica strain CLIB1...   100   6e-20
AL513444_21(AL513444|pid:none) Neurospora crassa DNA linkage gro...   100   6e-20
FJ008912_1(FJ008912|pid:none) Hippoglossus hippoglossus ubiquiti...    99   9e-20
BT087726_1(BT087726|pid:none) Zea mays full-length cDNA clone ZM...    99   9e-20
EU952258_1(EU952258|pid:none) Zea mays clone 1273319 ubiquitin-c...    99   9e-20
AL928914_6(AL928914|pid:none) Mouse DNA sequence from clone RP23...    99   9e-20
BT035902_1(BT035902|pid:none) Zea mays full-length cDNA clone ZM...    99   9e-20
CR382131_498(CR382131|pid:none) Yarrowia lipolytica strain CLIB1...    99   9e-20
AF061736_1(AF061736|pid:none) Homo sapiens ubiquitin-conjugating...    99   1e-19
EU975078_1(EU975078|pid:none) Zea mays clone 466704 unknown mRNA.      99   1e-19
CR940352_300(CR940352|pid:none) Theileria annulata strain Ankara...    99   1e-19
CP000584_457(CP000584|pid:none) Ostreococcus lucimarinus CCE9901...    99   1e-19
CR954205_188(CR954205|pid:none) Ostreococcus tauri strain OTTH05...    99   1e-19
EF081759_1(EF081759|pid:none) Picea sitchensis clone WS0285_I11 ...    99   1e-19
U18530_21(U18530|pid:none) Saccharomyces cerevisiae chromosome V...    99   1e-19
(P16577) RecName: Full=Ubiquitin-conjugating enzyme E2-23 kDa;  ...    98   2e-19
(Q8LGF7) RecName: Full=Probable ubiquitin carrier protein E2 21;...    98   2e-19
CU633438_434(CU633438|pid:none) Podospora anserina genomic DNA c...    98   2e-19
BC008238_1(BC008238|pid:none) Mus musculus ubiquitin-conjugating...    98   2e-19
AL844502_188(AL844502|pid:none) Plasmodium falciparum 3D7 chromo...    98   2e-19
(Q54XS6) RecName: Full=Probable ubiquitin-conjugating enzyme E2 ...    98   2e-19
T18512(T18512)hypothetical protein C0855w - malaria parasite (Pl...    98   2e-19
EF147373_1(EF147373|pid:none) Populus trichocarpa clone WS01230_...    97   3e-19
AK343174_1(AK343174|pid:none) Acyrthosiphon pisum ACYPI001299 mR...    97   3e-19
EU951840_1(EU951840|pid:none) Zea mays clone 1061423 unknown mRNA.     97   4e-19
BT070458_1(BT070458|pid:none) Picea sitchensis clone WS02730_H10...    97   5e-19
FN357349_33(FN357349|pid:none) Schistosoma mansoni genome sequen...    97   5e-19
EF147698_1(EF147698|pid:none) Populus trichocarpa clone WS0124_G...    97   5e-19
AY291287_1(AY291287|pid:none) Bos taurus E2 ubiquitin conjugatin...    97   5e-19
AK059694_1(AK059694|pid:none) Oryza sativa Japonica Group cDNA c...    97   5e-19
CT010270_1(CT010270|pid:none) Mus musculus full open reading fra...    97   5e-19
EU244430_1(EU244430|pid:none) Capra hircus huntingtin interactin...    96   6e-19
CP000585_185(CP000585|pid:none) Ostreococcus lucimarinus CCE9901...    96   6e-19
(Q5JXB2) RecName: Full=Putative ubiquitin-conjugating enzyme E2 ...    96   6e-19
AL110500_18(AL110500|pid:none) Caenorhabditis elegans YAC Y87G2A...    96   6e-19
(O00762) RecName: Full=Ubiquitin-conjugating enzyme E2 C;       ...    96   6e-19
DQ887086_1(DQ887086|pid:none) Arachis hypogaea ubiquitin-conjuga...    96   6e-19
BT003599_1(BT003599|pid:none) Drosophila melanogaster GM10337 fu...    96   6e-19
AY891303_1(AY891303|pid:none) Synthetic construct Homo sapiens c...    96   6e-19
(Q86IZ3) RecName: Full=Ubiquitin-conjugating enzyme E2 pex4;    ...    96   6e-19
CP001574_322(CP001574|pid:none) Micromonas sp. RCC299 chromosome...    96   8e-19
BT056516_1(BT056516|pid:none) Salmo salar clone ssal-evd-528-130...    96   8e-19
EU976805_1(EU976805|pid:none) Zea mays clone 990647 ubiquitin-co...    96   8e-19
AF159230_1(AF159230|pid:none) Mus musculus E2 ubiquitin conjugat...    96   8e-19
AE016818_402(AE016818|pid:none) Ashbya gossypii (= Eremothecium ...    96   1e-18
CP000497_479(CP000497|pid:none) Pichia stipitis CBS 6054 chromos...    96   1e-18
(Q9D1C1) RecName: Full=Ubiquitin-conjugating enzyme E2 C;       ...    96   1e-18
AJ277746_1(AJ277746|pid:none) Drosophila melanogaster mRNA for u...    95   1e-18
AK136186_1(AK136186|pid:none) Mus musculus in vitro fertilized e...    95   2e-18
AF510491_1(AF510491|pid:none) Danio rerio ubiquitin conjugating ...    95   2e-18
EF146699_1(EF146699|pid:none) Populus trichocarpa clone WS01212_...    95   2e-18
BT069771_1(BT069771|pid:none) Zea mays full-length cDNA clone ZM...    95   2e-18
X71381_1(X71381|pid:none) A.thaliana gene for ubiquitin carrier ...    95   2e-18
AM920437_1408(AM920437|pid:none) Penicillium chrysogenum Wiscons...    94   2e-18
BT078288_1(BT078288|pid:none) Lepeophtheirus salmonis Pacific fo...    94   2e-18
CP000881_95(CP000881|pid:none) Hemiselmis andersenii chromosome ...    94   2e-18
FN314566_1(FN314566|pid:none) Schistosoma japonicum isolate Anhu...    94   3e-18
BT034037_1(BT034037|pid:none) Zea mays full-length cDNA clone ZM...    94   3e-18
AY892102_1(AY892102|pid:none) Synthetic construct Homo sapiens c...    94   4e-18
BC047985_1(BC047985|pid:none) Xenopus laevis ubiquitin-conjugati...    94   4e-18
BT081849_1(BT081849|pid:none) Rana catesbeiana clone rcat-evr-52...    94   4e-18
BT063453_1(BT063453|pid:none) Zea mays full-length cDNA clone ZM...    94   4e-18
BC102100_1(BC102100|pid:none) Bos taurus ubiquitin-conjugating e...    94   4e-18
(Q4R5Y8) RecName: Full=Ubiquitin-conjugating enzyme E2 G1;      ...    94   4e-18
(Q5UQC9) RecName: Full=Probable ubiquitin-conjugating enzyme E2 ...    94   4e-18
(Q42540) RecName: Full=Ubiquitin-conjugating enzyme E2 7;       ...    94   4e-18
(P62253) RecName: Full=Ubiquitin-conjugating enzyme E2 G1;      ...    94   4e-18
AC117072_66(AC117072|pid:none) Dictyostelium discoideum chromoso...    94   4e-18
(P25869) RecName: Full=Ubiquitin-conjugating enzyme E2;         ...    93   5e-18
(Q9FF66) RecName: Full=Ubiquitin carrier protein E2 22;         ...    93   5e-18

>U67838_1(U67838|pid:none) Dictyostelium discoideum putative
           ubiquitin conjugating enzyme UbcB (ubcB) gene, complete
           cds.
          Length = 148

 Score =  311 bits (797), Expect = 9e-84
 Identities = 148/148 (100%), Positives = 148/148 (100%)
 Frame = +2

Query: 122 MAAHKRLQKEITDMLKTPPSWCSAHLVDDNLQKWKATVQGPEGSPFEKGVFSMDIDIPAD 301
           MAAHKRLQKEITDMLKTPPSWCSAHLVDDNLQKWKATVQGPEGSPFEKGVFSMDIDIPAD
Sbjct: 1   MAAHKRLQKEITDMLKTPPSWCSAHLVDDNLQKWKATVQGPEGSPFEKGVFSMDIDIPAD 60

Query: 302 YPFKPPTLKFTTKIYHPNIKTSDGAICAEVFSTWSPQLKILDVLTTIRSILTDPNPDNPL 481
           YPFKPPTLKFTTKIYHPNIKTSDGAICAEVFSTWSPQLKILDVLTTIRSILTDPNPDNPL
Sbjct: 61  YPFKPPTLKFTTKIYHPNIKTSDGAICAEVFSTWSPQLKILDVLTTIRSILTDPNPDNPL 120

Query: 482 ETEIAQQFKTDRNAFNKTAKEWTKKYAK 565
           ETEIAQQFKTDRNAFNKTAKEWTKKYAK
Sbjct: 121 ETEIAQQFKTDRNAFNKTAKEWTKKYAK 148

Lambda     K      H
   0.318    0.134    0.401

Gapped
Lambda     K      H
   0.267   0.0410    0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3236559
Number of Hits to DB: 1,057,275,339
Number of extensions: 22504974
Number of successful extensions: 68241
Number of sequences better than 10.0: 1208
Number of HSP's gapped: 67515
Number of HSP's successfully gapped: 1214
Length of query: 203
Length of database: 1,051,180,864
Length adjustment: 122
Effective length of query: 81
Effective length of database: 656,320,666
Effective search space: 53161973946
Effective search space used: 53161973946
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 30 (16.2 bits)
PSORT 

 psg: 0.63  gvh: 0.41  alm: 0.47  top: 0.53  tms: 0.00  mit: 0.34  mip: 0.04
 nuc: 0.00  erl: 0.00  erm: 0.40  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 1.00 

	 48.0 %: cytoplasmic
	 32.0 %: nuclear
	 20.0 %: mitochondrial

>> prediction for Contig-U15039-1 is cyt
VS (DIR, S) 0
VH (FL, L) 1
VF (FL, S) 0
AH (FL, L) 1
AF (FL, S) 0
SL (DIR, L) 0
SS (DIR, S) 0
SH (FL, L) 0
SF (FL, S) 0
CH (FL, L) 0
CF (FL, S) 0
FCL (DIR, L) 0
FC (DIR, S) 0
FC-IC (SUB) 0