| Contig-U14994-1 |
| Contig ID |
Contig-U14994-1 |
| Contig update |
2004. 6.11 |
| Contig sequence |
 |
| Gap |
no gap |
| Contig length |
2170 |
| Chromosome number (1..6, M) |
5 |
| Chromosome length |
5062330 |
| Start point |
3531809 |
| End point |
3530481 |
| Strand (PLUS/MINUS) |
MINUS |
| Number of clones |
7 |
| Number of EST |
12 |
| Link to clone list |
U14994 |
| List of clone(s) |
|
| Translated Amino Acid sequence |
|
| Translated Amino Acid sequence (All Frames) |
|
| own update |
2004. 6.23 |
| Homology vs CSM-cDNA |
|
| dna update |
2009. 1. 8 |
| Homology vs DNA |
Query= Contig-U14994-1 (Contig-U14994-1Q) /CSM_Contig/Contig-U14994-1Q.Seq.d
(2170 letters)
Database: ddbj_A
92,845,959 sequences; 95,242,211,685 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value N
(BJ327145) Dictyostelium discoideum cDNA clone:dda19h09, 5' ... 1215 0.0 1
(BJ327411) Dictyostelium discoideum cDNA clone:dda20h08, 5' ... 1070 0.0 1
(BJ344446) Dictyostelium discoideum cDNA clone:dda19h09, 3' ... 547 0.0 4
(BJ346611) Dictyostelium discoideum cDNA clone:dda24p12, 3' ... 545 0.0 4
(BJ347366) Dictyostelium discoideum cDNA clone:dda26k22, 3' ... 541 0.0 4
(BJ343963) Dictyostelium discoideum cDNA clone:dda17b23, 3' ... 539 0.0 4
(BJ344740) Dictyostelium discoideum cDNA clone:dda20h08, 3' ... 394 0.0 5
(BJ329963) Dictyostelium discoideum cDNA clone:dda26k22, 5' ... 1021 0.0 1
(BJ329294) Dictyostelium discoideum cDNA clone:dda24p12, 5' ... 969 0.0 2
(BJ402168) Dictyostelium discoideum cDNA clone:dds20o17, 3' ... 428 0.0 4
(BJ326720) Dictyostelium discoideum cDNA clone:dda17b23, 5' ... 890 0.0 2
(BJ389965) Dictyostelium discoideum cDNA clone:dds20o17, 5' ... 837 0.0 1
(C91063) Dictyostelium discoideum slug cDNA, clone SSJ439. 458 e-126 2
(AU075063) Dictyostelium discoideum slug cDNA, clone SSM853. 456 e-125 2
(C93231) Dictyostelium discoideum slug cDNA, clone SSM853. 422 e-113 1
(AU071309) Dictyostelium discoideum slug cDNA, clone SSB212. 254 1e-62 1
(AB011003) Candida albicans CaUAP1 gene for UDP-N-acetylgluc... 50 5e-07 4
(AR545157) Sequence 288 from patent US 6747137. 50 4e-04 2
(DD122003) STAPHYLOCOCCUS AUREUS PROTEINS AND NUCLEIC ACIDS. 44 0.005 2
(CS712779) Sequence 5319 from Patent EP1829892. 44 0.005 2
(AX622356) Sequence 5319 from Patent WO02094868. 44 0.005 2
(EB535733) AGENCOURT_52964469 D. erecta EST Drosophila erect... 40 0.012 2
(CC862070) NDL.108G10.SP6 Notre Dame Liverpool Aedes aegypti... 54 0.023 1
(AC100605) Mus musculus clone RP23-157L23, LOW-PASS SEQUENCE... 40 0.12 4
(AE017332) Mycoplasma hyopneumoniae 232, complete genome. 38 0.19 2
(DJ374113) Identification of Essential Genes in Prokaryotes. 40 0.26 2
(FF878124) CBWU9937.b1 Yutaka Satou unpublished cDNA library... 40 0.27 2
(FF923174) CBWU63124.b1 Yutaka Satou unpublished cDNA librar... 40 0.27 2
(FF861489) CBWU8687.b1 Yutaka Satou unpublished cDNA library... 40 0.27 2
(FF877798) CBWU9745.b1 Yutaka Satou unpublished cDNA library... 40 0.27 2
(BW041295) Ciona intestinalis cDNA, clone:cibd046d19, 5' end... 40 0.27 2
(FF936305) CBWU72008.b1 Yutaka Satou unpublished cDNA librar... 40 0.27 2
(FK183296) XABT200506.b1 Gateway compatible cien cDNA librar... 40 0.27 2
(BW369220) Ciona intestinalis cDNA, clone:cima846l20, 5'end,... 40 0.27 2
(AC174291) Medicago truncatula clone mth2-58k14, complete se... 36 0.31 6
(AL121892) Human DNA sequence from clone RP5-1195D24 on chro... 50 0.36 1
(AC162244) Bos taurus clone CH240-110I7, WORKING DRAFT SEQUE... 50 0.36 1
(AC141413) Bos taurus clone RP42-99E14, WORKING DRAFT SEQUEN... 50 0.36 1
(AC222905) Bos taurus clone CH240-435E11, WORKING DRAFT SEQU... 50 0.36 1
(AC199418) Zea mays chromosome 4 clone CH201-10G1; ZMMBBc001... 50 0.36 1
(AC193454) Zea mays chromosome 4 clone CH201-419A3; ZMMBBc04... 50 0.36 1
(DC242716) Petunia x hybrida cDNA, clone: PET04SEQ06303D. 50 0.36 1
(DC240317) Petunia x hybrida cDNA, clone: PET04SEQ01308E. 50 0.36 1
(CJ483574) Macaca fascicularis mRNA, clone: QtsA-11062, 5' e... 50 0.36 1
(CJ480444) Macaca fascicularis mRNA, clone: QtrA-15940, 5' e... 50 0.36 1
(CJ468153) Macaca fascicularis mRNA, clone: QnpA-17971, 5' e... 50 0.36 1
(CI017783) Oryza sativa Japonica Group cDNA, clone: 007-M034... 50 0.36 1
(EY428270) ZY134538 Aspergillus oryzae EST Library Aspergill... 50 0.36 1
(BJ327617) Dictyostelium discoideum cDNA clone:dda21k03, 5' ... 42 0.46 3
(FF733230) XABT47073.fwd Gateway compatible cien cDNA librar... 36 0.73 3
(CP000962) Clostridium botulinum A3 str. Loch Maree, complet... 38 0.81 22
(AC158765) Mus musculus chromosome 1, clone RP24-218I23, com... 48 1.4 1
(AC115063) Mus musculus chromosome 1, clone RP24-400H18, com... 48 1.4 1
(CU074408) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 48 1.4 1
(ER446447) 1092963831816 Global-Ocean-Sampling_GS-35-01-01-1... 48 1.4 1
(EK191364) 1095460020193 Global-Ocean-Sampling_GS-31-01-01-1... 48 1.4 1
(AG838282) Oryza sativa Indica Group genomic DNA, BAC end se... 48 1.4 1
(CO719973) DG14-99h11 DG14-muscle Canis lupus familiaris cDN... 48 1.4 1
(AM038127) Bos taurus 3' EST, clone C0007404k18. 48 1.4 1
(CJ473785) Macaca fascicularis mRNA, clone: QorA-13827, 5' e... 48 1.4 1
(BJ411594) Dictyostelium discoideum cDNA clone:ddv5d03, 5' e... 48 1.4 1
(AC073275) Homo sapiens BAC clone RP11-651K8 from 7, complet... 36 1.6 10
(DB939097) Manihot esculenta mRNA, clone: CAS01_001_N20, 3'end. 36 1.7 2
(ET868536) CHO_OF455xm06f2.ab1 CHO_OF Nicotiana tabacum geno... 44 1.7 2
(BJ415463) Dictyostelium discoideum cDNA clone:ddv22l17, 5' ... 46 1.8 2
(BJ386765) Dictyostelium discoideum cDNA clone:dds10f16, 5' ... 38 1.9 2
(BJ387413) Dictyostelium discoideum cDNA clone:dds2k07, 5' e... 40 2.0 2
(AE014823) Plasmodium falciparum 3D7 chromosome 14 section 8... 40 2.0 13
(BJ418195) Dictyostelium discoideum cDNA clone:ddv31p21, 5' ... 40 2.0 2
(EK289203) 1095462324208 Global-Ocean-Sampling_GS-31-01-01-1... 36 2.1 3
(BJ337066) Dictyostelium discoideum cDNA clone:dda56j05, 5' ... 40 2.1 2
(CU421961) Pleurobrachia pileus 5-PRIME EST from clone SQ0AA... 40 2.3 2
(CU418714) Pleurobrachia pileus 5-PRIME EST from clone SQ0AA... 40 2.3 2
(AC073289) Homo sapiens 3 BAC RP11-478O19 (Roswell Park Canc... 42 2.3 4
(CJ489167) Macaca fascicularis mRNA, clone: QtsA-16908, 5' e... 46 2.6 2
(FH491931) CHO_OF4341xa14f1.ab1 CHO_OF4 Nicotiana tabacum ge... 34 2.6 3
(CJ471152) Macaca fascicularis mRNA, clone: QorA-10776, 5' e... 40 2.7 2
(AC219363) Bos taurus clone CH240-338G24, WORKING DRAFT SEQU... 34 2.8 2
(U59461) Mamestra configurata NPV-A strain 90/2, complete ge... 34 2.8 2
(AF539999) Mamestra configurata nucleopolyhedrovirus A 90/4,... 34 2.8 2
(EK564247) 1095521033040 Global-Ocean-Sampling_GS-32-01-01-1... 46 2.8 2
(AC079467) Homo sapiens chromosome 5 clone RP11-357D18, comp... 36 3.5 8
(AC188947) Gallus gallus BAC clone CH261-69F24 from chromoso... 40 3.5 7
(BD080906) Gene sequence for identification of Staphylococci... 34 3.6 2
(A97488) Sequence 44 from Patent WO9916780. 34 3.6 2
(AF099965) Staphylococcus xylosus factor essential for methi... 34 3.6 2
(ES828080) UFL_206_32 Cotton fiber 0-10 day post anthesis Go... 36 3.6 2
(EU016673) Uncultured marine bacterium HF4000APKG2098 fosmid... 38 3.6 5
(EK147406) 1095456028778 Global-Ocean-Sampling_GS-31-01-01-1... 36 3.7 2
(ES813374) UFL_205_13 Cotton fiber 0-10 day post anthesis Go... 36 3.7 2
(EJ431410) 1093015258476 Global-Ocean-Sampling_GS-28-01-01-1... 34 3.7 2
(AI731685) BNLGHi10486 Six-day Cotton fiber Gossypium hirsut... 36 3.7 2
(BU393421) 603802612F1 CSEQCHN57 Gallus gallus cDNA clone Ch... 42 3.7 2
(EB205564) PEG002-C-005936-301 Normalized Pedal-Pleural Gang... 34 3.7 2
(EJ395532) 1093011995497 Global-Ocean-Sampling_GS-28-01-01-1... 34 3.8 2
(BJ396971) Dictyostelium discoideum cDNA clone:dds44i16, 5' ... 34 4.2 3
(BJ994928) Homo sapiens cDNA, clone:hmft-1376, 3'end. 42 4.6 2
(AL008970) Plasmodium falciparum MAL3P4. 34 4.6 11
(AC004366) Drosophila melanogaster (P1 DS07550 (D60)) DNA se... 40 4.7 3
(AG360557) Mus musculus molossinus DNA, clone:MSMg01-161A19.... 36 5.1 3
>(BJ327145) Dictyostelium discoideum cDNA clone:dda19h09, 5' end,
single read.
Length = 629
Score = 1215 bits (613), Expect = 0.0
Identities = 613/613 (100%)
Strand = Plus / Plus
Query: 367 tatgacattaaataaaattaaagaacaagataaaaagaaatgggaagatattggatatga 426
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17 tatgacattaaataaaattaaagaacaagataaaaagaaatgggaagatattggatatga 76
Query: 427 attaattagtaaaggtgaagttgcagtattattattagcgggtggacaagcaactagatt 486
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 77 attaattagtaaaggtgaagttgcagtattattattagcgggtggacaagcaactagatt 136
Query: 487 aggtacaacatttccaaaaggattttatgatgttggattaccatcaaagaaatcattatt 546
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 137 aggtacaacatttccaaaaggattttatgatgttggattaccatcaaagaaatcattatt 196
Query: 547 tcaattacaagctgaaagaatctatagattacaacaattggttagtgagagatataatgg 606
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 197 tcaattacaagctgaaagaatctatagattacaacaattggttagtgagagatataatgg 256
Query: 607 tagctatgatcaagattctaaaccaattcaatggtatataatgacaagtgaagcaacaca 666
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 257 tagctatgatcaagattctaaaccaattcaatggtatataatgacaagtgaagcaacaca 316
Query: 667 ttcagagacaattaaattctttgagaataagaattattttggtttgaaaaagagtgcttt 726
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 317 ttcagagacaattaaattctttgagaataagaattattttggtttgaaaaagagtgcttt 376
Query: 727 ctttttcttctcacaagcaatgataccatgtataacaccagaggatggtaaaatcatatc 786
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 377 ctttttcttctcacaagcaatgataccatgtataacaccagaggatggtaaaatcatatc 436
Query: 787 agagagtggctcaaagttatccctatcacctaatggaaatggtggcttgtttaaagcact 846
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 437 agagagtggctcaaagttatccctatcacctaatggaaatggtggcttgtttaaagcact 496
Query: 847 ctccacaagtggtgcaatcgacgatatgcgtaaaaagggtatcaaatacgtcactcaata 906
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 497 ctccacaagtggtgcaatcgacgatatgcgtaaaaagggtatcaaatacgtcactcaata 556
Query: 907 ttgtgtggataacatccttatcaatatggcagaccccgtctttgtcggatacatgcacga 966
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 557 ttgtgtggataacatccttatcaatatggcagaccccgtctttgtcggatacatgcacga 616
Query: 967 tcaatcagcggat 979
|||||||||||||
Sbjct: 617 tcaatcagcggat 629
Score = 250 bits (126), Expect(2) = 8e-63
Identities = 126/126 (100%)
Strand = Plus / Plus
Query: 1354 agtggtgcaatcgacgatatgcgtaaaaagggtatcaaatacgtcactcaatattgtgtg 1413
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 agtggtgcaatcgacgatatgcgtaaaaagggtatcaaatacgtcactcaatattgtgtg 563
Query: 1414 gataacatccttatcaatatggcagaccccgtctttgtcggatacatgcacgatcaatca 1473
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 gataacatccttatcaatatggcagaccccgtctttgtcggatacatgcacgatcaatca 623
Query: 1474 gcggat 1479
||||||
Sbjct: 624 gcggat 629
Score = 32.2 bits (16), Expect(2) = 8e-63
Identities = 16/16 (100%)
Strand = Plus / Plus
Query: 1 actgttggcctactgg 16
||||||||||||||||
Sbjct: 1 actgttggcctactgg 16
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Number of Sequences: 92845959
Number of Hits to DB: 2,396,916,380
Number of extensions: 150384706
Number of successful extensions: 12839032
Number of sequences better than 10.0: 264
Length of query: 2170
Length of database: 95,242,211,685
Length adjustment: 24
Effective length of query: 2146
Effective length of database: 97,308,875,965
Effective search space: 208824847820890
Effective search space used: 208824847820890
X1: 11 (21.8 bits)
S2: 23 (46.1 bits)
|
| protein update |
2009. 7.13 |
| Homology vs Protein |
Query= Contig-U14994-1 (Contig-U14994-1Q) /CSM_Contig/Contig-U14994-1Q.Seq.d
(2170 letters)
Database: nrp_B
3,236,559 sequences; 1,051,180,864 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
FJ380203_1(FJ380203|pid:none) Spodoptera exigua UDP-N-acetylgluc... 301 8e-80
CR848106_1(CR848106|pid:none) Xenopus tropicalis finished cDNA, ... 299 3e-79
BC084497_1(BC084497|pid:none) Xenopus tropicalis UDP-N-acetylglu... 298 5e-79
AM270259_23(AM270259|pid:none) Aspergillus niger contig An12c002... 298 7e-79
(Q28CH3) RecName: Full=UDP-N-acetylhexosamine pyrophosphorylase-... 298 7e-79
BC044137_1(BC044137|pid:none) Danio rerio UDP-N-acteylglucosamin... 296 2e-78
BC112693_1(BC112693|pid:none) Bos taurus UDP-N-acteylglucosamine... 293 1e-77
BC009377_1(BC009377|pid:none) Homo sapiens UDP-N-acteylglucosami... 292 3e-77
AK147139_1(AK147139|pid:none) Mus musculus cDNA, RIKEN full-leng... 292 4e-77
AK049519_1(AK049519|pid:none) Mus musculus 7 days embryo whole b... 292 4e-77
AL596325_3(AL596325|pid:none) Human DNA sequence from clone RP11... 291 5e-77
AB011004_1(AB011004|pid:none) Homo sapiens HuUAP1 mRNA for UDP-N... 291 5e-77
AK312685_1(AK312685|pid:none) Homo sapiens cDNA, FLJ93080, highl... 291 5e-77
(Q16222) RecName: Full=UDP-N-acetylhexosamine pyrophosphorylase;... 291 5e-77
BT001608_1(BT001608|pid:none) Drosophila melanogaster RE31673 fu... 290 2e-76
AE014134_1146(AE014134|pid:none) Drosophila melanogaster chromos... 290 2e-76
AE014134_1147(AE014134|pid:none) Drosophila melanogaster chromos... 290 2e-76
AP007169_497(AP007169|pid:none) Aspergillus oryzae RIB40 genomic... 287 1e-75
AY088313_1(AY088313|pid:none) Arabidopsis thaliana clone 5509 mR... 283 1e-74
CP001577_2(CP001577|pid:none) Micromonas sp. RCC299 chromosome 1... 278 4e-73
CR382139_1040(CR382139|pid:none) Debaryomyces hansenii strain CB... 278 6e-73
BC043307_1(BC043307|pid:none) Mus musculus UDP-N-acteylglucosami... 277 1e-72
(Q3TW96) RecName: Full=UDP-N-acetylhexosamine pyrophosphorylase-... 277 1e-72
(Q3KQV9) RecName: Full=UDP-N-acetylhexosamine pyrophosphorylase-... 277 1e-72
CR382139_1147(CR382139|pid:none) Debaryomyces hansenii chromosom... 276 2e-72
BT052906_1(BT052906|pid:none) Medicago truncatula clone MTYFL_FM... 276 3e-72
(O74933) RecName: Full=UDP-N-acetylglucosamine pyrophosphorylase... 275 4e-72
CU928173_310(CU928173|pid:none) Zygosaccharomyces rouxii strain ... 275 5e-72
BC106035_1(BC106035|pid:none) Homo sapiens UDP-N-acteylglucosami... 275 6e-72
BC168670_1(BC168670|pid:none) Rattus norvegicus UDP-N-acteylgluc... 274 1e-71
AE016819_44(AE016819|pid:none) Ashbya gossypii (= Eremothecium g... 266 2e-69
CP000591_317(CP000591|pid:none) Ostreococcus lucimarinus CCE9901... 265 4e-69
BT064703_1(BT064703|pid:none) Zea mays full-length cDNA clone ZM... 263 2e-68
AE017346_157(AE017346|pid:none) Cryptococcus neoformans var. neo... 262 3e-68
BT042495_1(BT042495|pid:none) Zea mays full-length cDNA clone ZM... 261 6e-68
AK071409_1(AK071409|pid:none) Oryza sativa Japonica Group cDNA c... 261 1e-67
AK064783_1(AK064783|pid:none) Oryza sativa Japonica Group cDNA c... 260 1e-67
AY053411_1(AY053411|pid:none) Arabidopsis thaliana At1g31070/F17... 259 4e-67
AC000107_1(AC000107|pid:none) Genomic sequence for Arabidopsis t... 259 4e-67
(P43123) RecName: Full=UDP-N-acetylglucosamine pyrophosphorylase... 256 2e-66
BT077649_1(BT077649|pid:none) Lepeophtheirus salmonis Pacific fo... 255 4e-66
EU961398_1(EU961398|pid:none) Zea mays clone 235102 UDP-N-acetyl... 250 1e-64
FN357394_82(FN357394|pid:none) Schistosoma mansoni genome sequen... 249 2e-64
AK131159_1(AK131159|pid:none) Mus musculus premature mRNA for mF... 248 8e-64
BC130030_1(BC130030|pid:none) Mus musculus UDP-N-acteylglucosami... 228 7e-58
BC136391_1(BC136391|pid:none) Homo sapiens UDP-N-acteylglucosami... 215 6e-54
CP001106_423(CP001106|pid:none) Eubacterium eligens ATCC 27750 p... 206 3e-51
AM909686_1(AM909686|pid:none) Trypanosoma brucei brucei UAP gene... 203 2e-50
CP000885_3092(CP000885|pid:none) Clostridium phytofermentans ISD... 201 1e-49
CP001032_3730(CP001032|pid:none) Opitutus terrae PB90-1, complet... 196 4e-48
(Q49ZB5) RecName: Full=Probable uridylyltransferase SSP0716; ... 194 9e-48
(Q5HM59) RecName: Full=Probable uridylyltransferase SERP1770; ... 191 7e-47
(Q8CNG6) RecName: Full=Probable uridylyltransferase SE_1761; ... 191 9e-47
CP001107_2532(CP001107|pid:none) Eubacterium rectale ATCC 33656,... 189 3e-46
(Q6G7E3) RecName: Full=Probable uridylyltransferase SAS2072; ... 188 6e-46
(Q2FEW1) RecName: Full=Probable uridylyltransferase SAUSA300_213... 188 6e-46
(Q6GEQ8) RecName: Full=Probable uridylyltransferase SAR2262; ... 188 8e-46
(Q2YYH4) RecName: Full=Probable uridylyltransferase SAB2052c; ... 187 2e-45
(Q4L846) RecName: Full=Probable uridylyltransferase SH0870; ... 181 1e-43
(Q18493) RecName: Full=Probable UDP-N-acetylglucosamine pyrophos... 177 2e-42
BC068207_1(BC068207|pid:none) Mus musculus UDP-N-acteylglucosami... 166 1e-40
BX908798_16(BX908798|pid:none) Parachlamydia-related symbiont UW... 163 3e-38
EU967685_1(EU967685|pid:none) Zea mays clone 305353 unknown mRNA. 160 2e-37
AM884176_84(AM884176|pid:none) Chlamydia trachomatis strain L2/4... 155 6e-36
AE001273_732(AE001273|pid:none) Chlamydia trachomatis D/UW-3/CX,... 155 7e-36
FN392321_691(FN392321|pid:none) Pichia pastoris GS115 chromosome... 154 1e-35
AM502248_48(AM502248|pid:none) Leishmania infantum chromosome 30. 151 1e-34
CR848038_861(CR848038|pid:none) Chlamydophila abortus strain S26... 145 8e-33
AE002160_87(AE002160|pid:none) Chlamydia muridarum Nigg, complet... 142 4e-32
AP006861_103(AP006861|pid:none) Chlamydophila felis Fe/C-56 DNA,... 140 2e-31
AY049284_1(AY049284|pid:none) Arabidopsis thaliana At1g31070/F17... 135 8e-30
DQ399510_1(DQ399510|pid:none) Ictalurus punctatus clone SFFF08R ... 127 2e-27
AL590450_178(AL590450|pid:none) chromosome XI of strain GB-M1 of... 127 2e-27
BT066299_1(BT066299|pid:none) Zea mays full-length cDNA clone ZM... 114 1e-23
AL807752_40(AL807752|pid:none) Human DNA sequence from clone RP1... 112 6e-23
AL844509_424(AL844509|pid:none) Plasmodium falciparum 3D7 chromo... 107 2e-21
CR940347_730(CR940347|pid:none) Theileria annulata strain Ankara... 103 2e-20
AY223323_1(AY223323|pid:none) Schistosoma japonicum clone ZZD664... 97 3e-18
CR954213_212(CR954213|pid:none) Ostreococcus tauri strain OTTH05... 89 9e-16
EF677079_1(EF677079|pid:none) Picea sitchensis clone WS02761_H01... 80 3e-13
CP001327_339(CP001327|pid:none) Micromonas sp. RCC299 chromosome... 79 9e-13
(Q9C5I1) RecName: Full=UDP-sugar pyrophosphorylase; Sho... 79 9e-13
BT064096_1(BT064096|pid:none) Zea mays full-length cDNA clone ZM... 77 3e-12
CP000593_189(CP000593|pid:none) Ostreococcus lucimarinus CCE9901... 75 1e-11
AB236803_1(AB236803|pid:none) Trifolium pratense RNA for hypothe... 74 2e-11
(A2YGP6) RecName: Full=UDP-sugar pyrophosphorylase; EC=... 74 3e-11
(Q09WE7) RecName: Full=UDP-sugar pyrophosphorylase 1; E... 73 4e-11
AB236843_1(AB236843|pid:none) Trifolium pratense RNA for hypothe... 73 5e-11
EU974832_1(EU974832|pid:none) Zea mays clone 459390 UDP-sugar py... 70 4e-10
(Q54YZ0) RecName: Full=UTP--glucose-1-phosphate uridylyltransfer... 65 8e-09
AB078343_1(AB078343|pid:none) Staphylococcus aureus genes for Se... 47 2e-08
EU957624_1(EU957624|pid:none) Zea mays clone 1599495 unknown mRNA. 58 2e-06
AB025606_5(AB025606|pid:none) Arabidopsis thaliana genomic DNA, ... 57 2e-06
(P08800) RecName: Full=UTP--glucose-1-phosphate uridylyltransfer... 55 8e-06
AM746676_3090(AM746676|pid:none) Sorangium cellulosum 'So ce 56'... 55 1e-05
(O59819) RecName: Full=Probable UTP--glucose-1-phosphate uridyly... 54 3e-05
AE017343_372(AE017343|pid:none) Cryptococcus neoformans var. neo... 54 3e-05
FJ715637_1(FJ715637|pid:none) Bambusa oldhamii UDP-glucose pyrop... 53 4e-05
CS000704_1(CS000704|pid:none) Sequence 9 from Patent WO2005005629. 53 4e-05
DQ302093_1(DQ302093|pid:none) Populus tremula x Populus tremuloi... 53 5e-05
(Q43772) RecName: Full=UTP--glucose-1-phosphate uridylyltransfer... 52 7e-05
AY178448_1(AY178448|pid:none) Bambusa oldhamii UDP-glucose pyrop... 52 9e-05
AL590443_27(AL590443|pid:none) chromosome III of strain GB-M1 of... 52 1e-04
S35692(S35692)UTP-glucose-1-phosphate uridylyltransferase (EC 2.... 51 2e-04
AY811310_1(AY811310|pid:none) Schistosoma japonicum SJCHGC03578 ... 51 2e-04
CR382127_82(CR382127|pid:none) Yarrowia lipolytica strain CLIB12... 51 2e-04
FJ664267_1(FJ664267|pid:none) Annona cherimola UDP-glucose pyrop... 49 6e-04
EF085072_1(EF085072|pid:none) Picea sitchensis clone WS0298_G09 ... 49 6e-04
EF677449_1(EF677449|pid:none) Picea sitchensis clone WS02769_A21... 49 6e-04
AC126787_17(AC126787|pid:none) Medicago truncatula clone mth2-11... 49 6e-04
(Q07130) RecName: Full=UTP--glucose-1-phosphate uridylyltransfer... 49 6e-04
AM920436_1279(AM920436|pid:none) Penicillium chrysogenum Wiscons... 49 8e-04
(P78811) RecName: Full=Probable UTP--glucose-1-phosphate uridyly... 49 8e-04
CR954213_33(CR954213|pid:none) Ostreococcus tauri strain OTTH059... 49 8e-04
BC026626_1(BC026626|pid:none) Mus musculus UDP-glucose pyrophosp... 49 0.001
(Q91ZJ5) RecName: Full=UTP--glucose-1-phosphate uridylyltransfer... 49 0.001
AK153885_1(AK153885|pid:none) Mus musculus 2 days neonate thymus... 49 0.001
EU341595_1(EU341595|pid:none) Paulownia sp. ZKC-2008 UDP-glucose... 49 0.001
CP000593_26(CP000593|pid:none) Ostreococcus lucimarinus CCE9901 ... 48 0.002
AJ719970_1(AJ719970|pid:none) Gallus gallus mRNA for hypothetica... 48 0.002
AF534111_1(AF534111|pid:none) Gallus gallus UDP-glucose pyrophos... 48 0.002
BT033554_1(BT033554|pid:none) Zea mays full-length cDNA clone ZM... 48 0.002
AC114748_1(AC114748|pid:none) Homo sapiens BAC clone RP11-164A18... 47 0.002
AB236794_1(AB236794|pid:none) Trifolium pratense RNA for hypothe... 47 0.002
AY082622_1(AY082622|pid:none) Solanum tuberosum BelRus UTP:alpha... 47 0.002
S62599(S62599)UTP-glucose-1-phosphate uridylyltransferase (EC 2.... 47 0.002
(Q9SDX3) RecName: Full=UTP--glucose-1-phosphate uridylyltransfer... 47 0.002
AK300731_1(AK300731|pid:none) Homo sapiens cDNA FLJ56155 complet... 47 0.002
U20345_1(U20345|pid:none) Solanum tuberosum UDP-glucose pyrophos... 47 0.002
(P19595) RecName: Full=UTP--glucose-1-phosphate uridylyltransfer... 47 0.002
DQ445483_1(DQ445483|pid:none) Cucumis melo UDP-glucose pyrophosp... 47 0.002
AY082617_1(AY082617|pid:none) Solanum tuberosum Snowden UTP:alph... 47 0.003
CR860388_1(CR860388|pid:none) Pongo abelii mRNA; cDNA DKFZp459A0... 47 0.003
AY850189_1(AY850189|pid:none) Emericella nidulans UDP-glucose py... 47 0.004
BX908798_324(BX908798|pid:none) Parachlamydia-related symbiont U... 46 0.006
CS000696_1(CS000696|pid:none) Sequence 1 from Patent WO2005005629. 45 0.008
AF249880_1(AF249880|pid:none) Oryza sativa subsp. indica UDP-glu... 45 0.008
(Q9LKG7) RecName: Full=UTP--glucose-1-phosphate uridylyltransfer... 45 0.011
CR382139_983(CR382139|pid:none) Debaryomyces hansenii strain CBS... 45 0.011
CR382139_1087(CR382139|pid:none) Debaryomyces hansenii chromosom... 45 0.011
AB069659_1(AB069659|pid:none) Pyrus pyrifolia ugp-pc mRNA for UG... 45 0.011
AB037186_1(AB037186|pid:none) Candida glabrata UGP1 gene, comple... 45 0.014
(P32861) RecName: Full=UTP--glucose-1-phosphate uridylyltransfer... 44 0.024
FB792180_1(FB792180|pid:none) Sequence 11453 from Patent WO20080... 44 0.032
EU128494_1(EU128494|pid:none) Phoma herbarum UDP-glucose pyropho... 44 0.032
FN392319_121(FN392319|pid:none) Pichia pastoris GS115 chromosome... 43 0.054
CP001071_1712(CP001071|pid:none) Akkermansia muciniphila ATCC BA... 43 0.054
(P57751) RecName: Full=UTP--glucose-1-phosphate uridylyltransfer... 43 0.054
BT063794_1(BT063794|pid:none) Zea mays full-length cDNA clone ZM... 43 0.054
AE016820_288(AE016820|pid:none) Ashbya gossypii (= Eremothecium ... 43 0.054
CP001197_3146(CP001197|pid:none) Desulfovibrio vulgaris str. 'Mi... 43 0.054
CU651563_4(CU651563|pid:none) Zebrafish DNA sequence from clone ... 42 0.071
AC151822_4(AC151822|pid:none) Medicago truncatula clone mth2-32h... 42 0.071
AF361605_1(AF361605|pid:none) Arabidopsis thaliana AT3g03250/T17... 42 0.092
(Q9M9P3) RecName: Full=Probable UTP--glucose-1-phosphate uridyly... 42 0.092
AB027910_1(AB027910|pid:none) Schizosaccharomyces pombe gene for... 42 0.092
BC060013_1(BC060013|pid:none) Xenopus laevis hypothetical protei... 42 0.092
AP008211_1428(AP008211|pid:none) Oryza sativa (japonica cultivar... 42 0.12
AY946348_1(AY946348|pid:none) Chlamydomonas reinhardtii low phot... 41 0.16
T29493(T29493)hypothetical protein D1005.2 - Caenorhabditis eleg... 41 0.16
AY946347_1(AY946347|pid:none) Chlamydomonas reinhardtii low phot... 41 0.16
CU928181_219(CU928181|pid:none) Zygosaccharomyces rouxii strain ... 41 0.16
AK074143_1(AK074143|pid:none) Homo sapiens mRNA for FLJ00216 pro... 41 0.16
BT078600_1(BT078600|pid:none) Lepeophtheirus salmonis Pacific fo... 41 0.21
CP001185_1282(CP001185|pid:none) Thermosipho africanus TCF52B, c... 41 0.21
(Q5AD67) RecName: Full=ATP-dependent RNA helicase CHL1; ... 40 0.27
AL031745_34(AL031745|pid:none) Plasmodium falciparum DNA from MA... 39 0.60
AL844501_43(AL844501|pid:none) Plasmodium falciparum strain 3D7,... 39 0.60
AE017285_2310(AE017285|pid:none) Desulfovibrio vulgaris subsp. v... 38 1.7
(B7IUJ6) RecName: Full=Ribonuclease HII; Short=RNase HI... 38 1.7
CP000048_148(CP000048|pid:none) Borrelia hermsii DAH, complete g... 37 2.3
FM992689_113(FM992689|pid:none) Candida dubliniensis CD36 chromo... 37 2.3
AY633993_1(AY633993|pid:none) Borrelia hermsii putative lipoprot... 37 2.3
EF583007_1(EF583007|pid:none) Simian rotavirus A strain RRV core... 37 2.3
AY042811_1(AY042811|pid:none) Arabidopsis thaliana putative prot... 37 2.3
AE010301_262(AE010301|pid:none) Leptospira interrogans serovar L... 37 3.0
AE016824_192(AE016824|pid:none) Leptospira interrogans serovar C... 37 3.0
(B3F2X6) RecName: Full=Inner capsid protein VP2; &EF583011_1(EF... 37 3.9
(A9VT75) RecName: Full=Ribonuclease HII; Short=RNase HI... 36 5.1
T18372(T18372) repeat organellar protein - Plasmodium chabaudi ... 36 5.1
Z81568_9(Z81568|pid:none) Caenorhabditis elegans Cosmid K08E3, c... 36 5.1
AE014185_77(AE014185|pid:none) Plasmodium falciparum 3D7 chromos... 36 5.1
T23457(T23457) hypothetical protein K08E3.5a - Caenorhabditis el... 36 5.1
Z81568_8(Z81568|pid:none) Caenorhabditis elegans Cosmid K08E3, c... 36 5.1
(B7HLH0) RecName: Full=Ribonuclease HII; Short=RNase HI... 36 6.6
(A2T3R5) RecName: Full=Inner capsid protein VP2; &DQ838631_1(DQ... 36 6.6
CP000771_871(CP000771|pid:none) Fervidobacterium nodosum Rt17-B1... 36 6.6
AE005673_1742(AE005673|pid:none) Caulobacter crescentus CB15, co... 36 6.6
DQ838634_1(DQ838634|pid:none) Rotavirus A strain SA11-1A (SA11g4... 36 6.6
(Q86218) RecName: Full=Inner capsid protein VP2; &L33364_1(L333... 36 6.6
AF474406_1(AF474406|pid:none) Simian rotavirus SA11 C13 inner ca... 36 6.6
(P22672) RecName: Full=Inner capsid protein VP2; &P2XRSR(B35321... 36 6.6
EF560613_1(EF560613|pid:none) Rotavirus A strain BRV033 VP2 gene... 36 6.6
CP000682_1140(CP000682|pid:none) Metallosphaera sedula DSM 5348,... 35 8.6
CP000683_545(CP000683|pid:none) Rickettsia massiliae MTU5, compl... 35 8.6
AE001362_157(AE001362|pid:none) Plasmodium falciparum 3D7 chromo... 35 8.6
AB179247_1(AB179247|pid:none) Macaca fascicularis testis cDNA cl... 35 8.6
E71606(E71606)hypothetical protein PFB0765w - malaria parasite (... 35 8.6
AE014185_76(AE014185|pid:none) Plasmodium falciparum 3D7 chromos... 35 8.6
>FJ380203_1(FJ380203|pid:none) Spodoptera exigua
UDP-N-acetylglucosamine pyrophosphorylase (UAP) mRNA,
complete cds.
Length = 491
Score = 301 bits (770), Expect = 8e-80
Identities = 175/395 (44%), Positives = 248/395 (62%), Gaps = 8/395 (2%)
Frame = +2
Query: 161 NFEDIRNEWIEQGQGHVFNWFDKLSNEEKLNFENDIRKINVKEVNK------DYKNVLLN 322
++++I GQGH+ ++ LS +E+ +DI+KI+ EVN+ D V+L
Sbjct: 2 SYDNIFENLNSHGQGHLLKYWPDLSEKERAQLLSDIKKIDFAEVNELFRRANDTSKVILE 61
Query: 323 KDEQ-KIMKYEHFENVMTLNKIKEQDKKKWEDIGYELISKGEVAVLLLAGGQATRLGTTF 499
K E K + H+E V L+ K + +E+IG + IS G+V VLLLAGGQATRLG
Sbjct: 62 KVEDLKPIPDSHYEAVPNLSNEKILE---YENIGLKEISDGKVGVLLLAGGQATRLGFGH 118
Query: 500 PKGFYDVGLPSKKSLFQLQAERIYRLQQLVSERYNGSYDQDSKPIQWYIMTSEATHSETI 679
PKG YDVGLPS+K+LFQ+QAERI R+QQ+ +E+Y ++ K I WYIMTSE T T
Sbjct: 119 PKGMYDVGLPSRKTLFQIQAERIVRVQQMAAEKYG----KEGK-ITWYIMTSEHTRGPTA 173
Query: 680 KFFENKNYFGLKKSAFFFFSQAMIPCITPEDGKIISESGSKLSLSPNGNGGLFKALSTSG 859
+F + +YFGL + +F Q +PC E GKI + +S +P+GNGGL++AL G
Sbjct: 174 DYFRSHSYFGLNEEDIVYFEQGTLPCFDFE-GKIFLDEKYHVSSAPDGNGGLYRALKNQG 232
Query: 860 AIDDMRKKGIKYVTQYCVDNILINMADPVFVGYMHDQSADCGAKVVSKSDPKEPVGVMA- 1036
+ D+ K+G++++ + VDNILI +ADPVF+GY ++ADC AKVV KS P E VGV+
Sbjct: 233 ILADIAKRGVEHLHAHSVDNILIKVADPVFIGYCKSKNADCAAKVVQKSTPSEAVGVVCR 292
Query: 1037 LNGDGKPFVLEYSEIDEQSKFKKDQNGQLVFNYAHICINAFSFDFLDRIAKNHLDHLKYH 1216
+NG K V+EYSE+ +++ + +G+L F+ +IC + FS +FL +I N LK H
Sbjct: 293 VNGHYK--VVEYSELTDEAAESRTADGRLTFSAGNICNHYFSSEFLAKIC-NFESKLKLH 349
Query: 1217 VAFKKIPSAHPISGERQSPSSPNGWKLEKFIFRCF 1321
+A KKIP G RQ P+ PNG K+EKFIF F
Sbjct: 350 IAKKKIPYVDH-EGVRQKPTEPNGIKMEKFIFDVF 383
Score = 130 bits (327), Expect(2) = 5e-43
Identities = 72/158 (45%), Positives = 103/158 (65%), Gaps = 1/158 (0%)
Frame = +1
Query: 1351 HSGAIDDMRKKGIKYVTQYCVDNILINMADPVFVGYMHDQSADCGAKVVSKSDPKEPVGV 1530
+ G + D+ K+G++++ + VDNILI +ADPVF+GY ++ADC AKVV KS P E VGV
Sbjct: 230 NQGILADIAKRGVEHLHAHSVDNILIKVADPVFIGYCKSKNADCAAKVVQKSTPSEAVGV 289
Query: 1531 MA-LNGDGKPFVLEYSEIDEQSKFKKDQNGQLVFNYAHICINAFSFDFLDRIAKNHLDHL 1707
+ +NG K V+EYSE+ +++ + +G+L F+ +IC + FS +FL +I N L
Sbjct: 290 VCRVNGHYK--VVEYSELTDEAAESRTADGRLTFSAGNICNHYFSSEFLAKIC-NFESKL 346
Query: 1708 KYHVAFKKIPSAHPISGERQSPSSPNGWKLEKFIFRCF 1821
K H+A KKIP G RQ P+ PNG K+EKFIF F
Sbjct: 347 KLHIAKKKIPYVDH-EGVRQKPTEPNGIKMEKFIFDVF 383
Score = 70.1 bits (170), Expect(2) = 5e-43
Identities = 35/90 (38%), Positives = 53/90 (58%)
Frame = +2
Query: 1811 FDVFPFSKKMVCLEIERSKEFSPLKNCGGMNLPDSPETCLRDISNLHKSFIENSGGKIDS 1990
FDVF F++ +CLE+ R EFS LKN D P T D+ LH+ +I +GG ++
Sbjct: 380 FDVFEFAENFICLEVARDVEFSALKNNDAAK-KDCPSTAREDLLRLHRKYIREAGGIVED 438
Query: 1991 SNSTICEVSPLVSLNGENLKNFVNDKTFIL 2080
+ E+SPL+S GENL++ V+ + F +
Sbjct: 439 NIDV--EISPLLSYGGENLEDLVSGEVFTI 466
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3236559
Number of Hits to DB: 3,447,925,665
Number of extensions: 73823321
Number of successful extensions: 255158
Number of sequences better than 10.0: 199
Number of HSP's gapped: 254452
Number of HSP's successfully gapped: 355
Length of query: 723
Length of database: 1,051,180,864
Length adjustment: 136
Effective length of query: 587
Effective length of database: 611,008,840
Effective search space: 358662189080
Effective search space used: 358662189080
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)
|
| PSORT |
|
| VS (DIR, S) |
0 |
| VH (FL, L) |
0 |
| VF (FL, S) |
0 |
| AH (FL, L) |
0 |
| AF (FL, S) |
3 |
| SL (DIR, L) |
0 |
| SS (DIR, S) |
3 |
| SH (FL, L) |
0 |
| SF (FL, S) |
1 |
| CH (FL, L) |
0 |
| CF (FL, S) |
0 |
| FCL (DIR, L) |
0 |
| FC (DIR, S) |
0 |
| FC-IC (SUB) |
0 |