Contig-U14983-1
Contig ID Contig-U14983-1
Contig update 2004. 6.11
Contig sequence
>Contig-U14983-1 (Contig-U14983-1Q) /CSM_Contig/Contig-U14983-1Q.Seq.d
AATAATAATAATAATAACAGAGGATATTCAACTACTAACCCAAGTAATCA
ATCACATGGATTTGTTAGACCATCAATAGCAAATGGTTTTGCAACAACTG
AATTTAATAATCATAACAATAACAATAACAATAGTAATAATAATAATAAT
AATAATAATTTCAATAATAACATAAAACCACCAACACCAGTTCAAACAAA
GAGTAATGTATCATTAATTGATGACCAATGGAATAGCGCACCACAAGGTA
AGAAATCATTAATCGATGATGATTTCAATGGTCCATCTGTTGCACCACAA
CAACAACCACATAGTACCTTTGATCCATTTGTTGGTTCAAAAGTAAGCAG
CAATGGTGCTAACAATAACAATATCAATATGAACAACAATATGAACAACA
ATATGAACAACAATATGAATAATAATATGAACAACAATAATATGAATAAA
CAACCATTTAATAATAATGGATTCCCTACACCACCAACCTGGTATGAATA
GTATGATGGGAGGTAACAATAATAACAATCTTCAATATGATGAATAATGG
TGGTGGTATGATGCCAATGAATAATGGTATGATGAACAATGGTGGCATGA
TGAATAATGGTGGTGGTGGTATGATGCCAATGAATAATGGCGGTATGATG
CCAATGAATAATGGTGGTATGATGAACAATGGTGGTATGTTGAATAATGG
TGTTATGATGAACAATGGTGGTATGATGCCAATGAATAATGGAGGTATGA
TGGGAGGATTTGGTGGTATGATGCCAATGAATAATGGTGGTATGATGGGT
GGTGCTAACAATATGGGTGGCATGAATTTAGGAATGAATGCTATGTCTCC
AATGGGTGGTGCTCCAATGAATAACAATATGGGCGCTATGAATTTAGGAA
TGAATGCTATGTCTCCAATGGGTGGTGCTCCAATGAGGTCACCAGCAGCT
GCTGGAAATAACTCTTTCAATATTACTCCAACTTCTGCTACTCCAACTCC
ACCACAACCATCTCAATTCTCTTCTTTGGATTCTTTAATGTTTACTTCAT
CCCCATCTCAACCAAAACAATCACAACCATCTCAATCATTTGGTAACAAT
TTCCCAATCACTGCAAATAATTCAAATAACAACAATAATGTTAATAGCTT
ATTCTTTTAATAAAATATTACAATAATAATAATAAAAATACAAAAAAAAG
AAAAAAATGAAAAAAAAGAAAAAAAAAAAAAAAGAAATGAAATAAAAAAA
AAATATTTATAAAATGAAAATTAAAAAAAATAAATAAAAATATATAGTAT
TTTCAATTTGTTGTTTTATTTCTTTTATTTAATATTTAAAATTTTAAAAT
ATTTTCAAACGATCAGGGGAACATTGGTCTTCAAAATATTTGGAAATAAA
AGTGTAACTATGTCTTGATATTTGATAACAACAATAATGTGGAGGACAAT
CAATATTTTCATAACAAACTGCCATTGGTCTTGGTGGTAAAGTTGAGCCA
GTTGTTGTGGTACTTGATGTTGCTCCAATTGTAGATGAATAGATAGTTGA
TAATTCAGTGGTATGGCTTACGGTTGTTAGGTCAGTTGTGGTTGTTGGAA
TAAATGTTGTTGAAGTAGTAGATGGTGATGTTGTTGGCATTGTTGTGGTT
GTTGACATTGTTGAAATTGTTGTTGGTGAAAATGTTGAAATTGTTGTTGG
ATTGAGTGTTGTTGATGTAGTTGCAGAAGTTGTAGTTGTTGGTAATGAAG
TTATTGTTGAAGTTGTTGGAATTGATGTAGTTGTGGCCTCACTTGTTATA
ATAGAGGTGGTTGTAGTTGTAGTTATTTCTACACATAGACATCCACCACC
TTCACAATATGGATATAGACAGTCATCAGTTACTGGACACTCTACAAAAT
TCGTTGTAGAGTGTTCAGAATTTTCATCACATTGTTTTGGGAAACATAAA
TCAGTAGTGTTACAATTACTTTCATCACATCTACAACCGGCAATATAAGC
GTGTTCACAACAAGTTCCTTCTGTACAATAATCAAGTGTACATGCATCAC
CATCACCACAATCTCTATCTGCTACTACACAGGTACCACATAAAGTTCTC
TTTTGAGAACAACTTGTTAGATCATCAAAACATNATTTCTACAAATACCA
TCACTAAATAAATAAAAAATAAAAATTAANTTTTTT

Gap no gap
Contig length 2186
Chromosome number (1..6, M) 2
Chromosome length 8467578
Start point 5556768
End point 5558955
Strand (PLUS/MINUS) PLUS
Number of clones 4
Number of EST 5
Link to clone list U14983
List of clone(s)

est1=CFH641F,1,797
est2=CHE182F,21,553
est3=AFF281Z,322,1176
est4=AFI734F,654,1229
est5=AFI734Z,1038,2186
Translated Amino Acid sequence
*****qrifny*pk*sitwic*tinskwfcnn*i**s*q*q*q*********fq**hktt
ntssnke*ciin**pme*rttr*eiinr**fqwsicctttttt*yl*sicwfkskqqwc*
q*qyqyeqqyeqqyeqqye**yeqq*ye*tti***wipyttnlv*iv*WEVTIITIFNMM
NNGGGMMPMNNGMMNNGGMMNNGGGGMMPMNNGGMMPMNNGGMMNNGGMLNNGVMMNNGG
MMPMNNGGMMGGFGGMMPMNNGGMMGGANNMGGMNLGMNAMSPMGGAPMNNNMGAMNLGM
NAMSPMGGAPMRSPAAAGNNSFNITPTSATPTPPQPSQFSSLDSLMFTSSPSQPKQSQPS
QSFGNNFPITANNSNNNNNVNSLFF**nitiiiikiqkkeknekkekkkkrneikkkyl*
nen*kk*ikiysifnllfyffylifkilkyfqtirgtlvfkifgnksvtms*ylittimw
rtinifitnchwsww*s*asccgt*ccsncr*ids**fsgmaygc*vscgcwnkcc*ssr
w*ccwhccgc*hc*nccw*kc*nccwiecc*cscrscscw**syc*scwn*cscgltcyn
rggcscsyfyt*tsttftiwi*tvisywtlykircrvfrifitlfwet*issvtitfits
ttgnisvfttssfctiikctcitittisicyytgtt*ssllrttc*iiktxflqipslnk
*kikixff


Translated Amino Acid sequence (All Frames)
Frame A:
nnnnnnrgysttnpsnqshgfvrpsiangfattefnnhnnnnnnsnnnnnnnnfnnnikp
ptpvqtksnvsliddqwnsapqgkkslidddfngpsvapqqqphstfdpfvgskvssnga
nnnninmnnnmnnnmnnnmnnnmnnnnmnkqpfnnngfptpptwye*ydgr*q**qssi*
*imvvv*cq*imv**tmva**imvvvv*cq*imav*cq*imvv**tmvvc*imvl**tmv
v*cq*imev*wedlvv*cq*imvv*wvvltiwva*i*e*mlclqwvvlq*itiwal*i*e
*mlclqwvvlq*ghqqlleitlsillqllllqlhhnhlnsllwil*cllhphlnqnnhnh
lnhlvtisqslqiiqittimliaysfnkilq****kykkkkkmkkkkkkkkemk*kkniy
kmkikknk*kyivfsiccfisfi*ylkf*nifkrsgehwsskyleikv*lcldi**qq*c
ggqsifs*qtaiglggkvepvvvvldvapivde*ivdnsvvwltvvrsvvvvginvvevv
dgdvvgivvvvdiveivvgenveivvglsvvdvvaevvvvgnevivevvgidvvvaslvi
ievvvvvvisthrhpppsqygyrqssvtghstkfvvecsefsshcfgkhksvvlqllssh
lqpai*acsqqvpsvq*ssvhaspspqslsattqvphkvlf*eqlvrsskhxfykyhh*i
nkk*klxf


Frame B:
iiiiitediqlltqvinhmdlldhq*qmvlqqlnliiitititiviiiiiiiisiit*nh
qhqfkqrvmyh*lmtngiahhkvrnh*smmismvhllhhnnnhivplihllvqk*aamvl
titisi*tti*tti*tti*iii*ttii*innhliimdslhhqpgmnsmmggnnnnnlqyd
e*wwwydane*wydeqwwhde*wwwwydane*wrydane*wwydeqwwyve*wcydeqww
ydane*wrydgriwwydane*wwydgwc*qygwhefrnecyvsngwcsne*qygryefrn
ecyvsngwcsnevtsscwk*lfqyysnfcysnstttisilffgffnvyfipistktitti
siiw*qfpnhck*fk*qq*c**lillikyynnnnkntkkrkk*kkrkkkkkk*nkkkifi
k*klkkinkni*yfqfvvlfllfni*nfkifsndqgniglqniwk*kcnyvlifdnnnnv
ednqyfhnklplvlvvklsqllwylmllql*mnr*liiqwyglrllgqlwlle*mllk**
mvmllallwlltllklllvkmlkllld*vllm*lqkl*llvmklllkllelm*lwphll*
*rwl*l*lflhidihhlhnmdidshqlldtlqnsl*svqnfhhivlgninq*cynyfhhi
ynrqykrvhnkfllynnqvymhhhhhnlylllhryhikfsfennlldhqnxistntitk*
iknkn*xf


Frame C:
*****qrifny*pk*sitwic*tinskwfcnn*i**s*q*q*q*********fq**hktt
ntssnke*ciin**pme*rttr*eiinr**fqwsicctttttt*yl*sicwfkskqqwc*
q*qyqyeqqyeqqyeqqye**yeqq*ye*tti***wipyttnlv*iv*WEVTIITIFNMM
NNGGGMMPMNNGMMNNGGMMNNGGGGMMPMNNGGMMPMNNGGMMNNGGMLNNGVMMNNGG
MMPMNNGGMMGGFGGMMPMNNGGMMGGANNMGGMNLGMNAMSPMGGAPMNNNMGAMNLGM
NAMSPMGGAPMRSPAAAGNNSFNITPTSATPTPPQPSQFSSLDSLMFTSSPSQPKQSQPS
QSFGNNFPITANNSNNNNNVNSLFF**nitiiiikiqkkeknekkekkkkrneikkkyl*
nen*kk*ikiysifnllfyffylifkilkyfqtirgtlvfkifgnksvtms*ylittimw
rtinifitnchwsww*s*asccgt*ccsncr*ids**fsgmaygc*vscgcwnkcc*ssr
w*ccwhccgc*hc*nccw*kc*nccwiecc*cscrscscw**syc*scwn*cscgltcyn
rggcscsyfyt*tsttftiwi*tvisywtlykircrvfrifitlfwet*issvtitfits
ttgnisvfttssfctiikctcitittisicyytgtt*ssllrttc*iiktxflqipslnk
*kikixff


own update 2004. 6.23
Homology vs CSM-cDNA
Query= Contig-U14983-1 (Contig-U14983-1Q)
/CSM_Contig/Contig-U14983-1Q.Seq.d
(2186 letters)

Database: CSM
8402 sequences; 8,075,542 total letters


Score E
Sequences producing significant alignments: (bits) Value

Contig-U14983-1 (Contig-U14983-1Q) /CSM_Contig/Conti... 1344 0.0
Contig-U15718-1 (Contig-U15718-1Q) /CSM_Contig/Conti... 44 0.001
Contig-U11376-1 (Contig-U11376-1Q) /CSM_Contig/Conti... 44 0.001
Contig-U12055-1 (Contig-U12055-1Q) /CSM_Contig/Conti... 40 0.014
Contig-U11904-1 (Contig-U11904-1Q) /CSM_Contig/Conti... 40 0.014
Contig-U15362-1 (Contig-U15362-1Q) /CSM_Contig/Conti... 38 0.056
Contig-U15245-1 (Contig-U15245-1Q) /CSM_Contig/Conti... 38 0.056
Contig-U13509-1 (Contig-U13509-1Q) /CSM_Contig/Conti... 38 0.056
Contig-U12529-1 (Contig-U12529-1Q) /CSM_Contig/Conti... 38 0.056
Contig-U12145-1 (Contig-U12145-1Q) /CSM_Contig/Conti... 38 0.056

>Contig-U14983-1 (Contig-U14983-1Q) /CSM_Contig/Contig-U14983-1Q.Seq.d
Length = 2186

Score = 1344 bits (678), Expect = 0.0
Identities = 678/678 (100%)
Strand = Plus / Plus


Query: 454 ccatttaataataatggattccctacaccaccaacctggtatgaatagtatgatgggagg 513
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 454 ccatttaataataatggattccctacaccaccaacctggtatgaatagtatgatgggagg 513


Query: 514 taacaataataacaatcttcaatatgatgaataatggtggtggtatgatgccaatgaata 573
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 514 taacaataataacaatcttcaatatgatgaataatggtggtggtatgatgccaatgaata 573


Query: 574 atggtatgatgaacaatggtggcatgatgaataatggtggtggtggtatgatgccaatga 633
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 574 atggtatgatgaacaatggtggcatgatgaataatggtggtggtggtatgatgccaatga 633


Query: 634 ataatggcggtatgatgccaatgaataatggtggtatgatgaacaatggtggtatgttga 693
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 634 ataatggcggtatgatgccaatgaataatggtggtatgatgaacaatggtggtatgttga 693


Query: 694 ataatggtgttatgatgaacaatggtggtatgatgccaatgaataatggaggtatgatgg 753
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 694 ataatggtgttatgatgaacaatggtggtatgatgccaatgaataatggaggtatgatgg 753


Query: 754 gaggatttggtggtatgatgccaatgaataatggtggtatgatgggtggtgctaacaata 813
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 754 gaggatttggtggtatgatgccaatgaataatggtggtatgatgggtggtgctaacaata 813


Query: 814 tgggtggcatgaatttaggaatgaatgctatgtctccaatgggtggtgctccaatgaata 873
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 814 tgggtggcatgaatttaggaatgaatgctatgtctccaatgggtggtgctccaatgaata 873


Query: 874 acaatatgggcgctatgaatttaggaatgaatgctatgtctccaatgggtggtgctccaa 933
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 874 acaatatgggcgctatgaatttaggaatgaatgctatgtctccaatgggtggtgctccaa 933


Query: 934 tgaggtcaccagcagctgctggaaataactctttcaatattactccaacttctgctactc 993
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 934 tgaggtcaccagcagctgctggaaataactctttcaatattactccaacttctgctactc 993


Query: 994 caactccaccacaaccatctcaattctcttctttggattctttaatgtttacttcatccc 1053
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 994 caactccaccacaaccatctcaattctcttctttggattctttaatgtttacttcatccc 1053


Query: 1054 catctcaaccaaaacaatcacaaccatctcaatcatttggtaacaatttcccaatcactg 1113
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1054 catctcaaccaaaacaatcacaaccatctcaatcatttggtaacaatttcccaatcactg 1113


Query: 1114 caaataattcaaataaca 1131
||||||||||||||||||
Sbjct: 1114 caaataattcaaataaca 1131


Score = 759 bits (383), Expect = 0.0
Identities = 386/386 (100%)
Strand = Plus / Plus


Query: 1769 gaattgatgtagttgtggcctcacttgttataatagaggtggttgtagttgtagttattt 1828
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1769 gaattgatgtagttgtggcctcacttgttataatagaggtggttgtagttgtagttattt 1828


Query: 1829 ctacacatagacatccaccaccttcacaatatggatatagacagtcatcagttactggac 1888
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1829 ctacacatagacatccaccaccttcacaatatggatatagacagtcatcagttactggac 1888


Query: 1889 actctacaaaattcgttgtagagtgttcagaattttcatcacattgttttgggaaacata 1948
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1889 actctacaaaattcgttgtagagtgttcagaattttcatcacattgttttgggaaacata 1948


Query: 1949 aatcagtagtgttacaattactttcatcacatctacaaccggcaatataagcgtgttcac 2008
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1949 aatcagtagtgttacaattactttcatcacatctacaaccggcaatataagcgtgttcac 2008


Query: 2009 aacaagttccttctgtacaataatcaagtgtacatgcatcaccatcaccacaatctctat 2068
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2009 aacaagttccttctgtacaataatcaagtgtacatgcatcaccatcaccacaatctctat 2068


Query: 2069 ctgctactacacaggtaccacataaagttctcttttgagaacaacttgttagatcatcaa 2128
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2069 ctgctactacacaggtaccacataaagttctcttttgagaacaacttgttagatcatcaa 2128


Query: 2129 aacatnatttctacaaataccatcac 2154
||||||||||||||||||||||||||
Sbjct: 2129 aacatnatttctacaaataccatcac 2154


Score = 543 bits (274), Expect = e-154
Identities = 274/274 (100%)
Strand = Plus / Plus


Query: 1354 ttcaaacgatcaggggaacattggtcttcaaaatatttggaaataaaagtgtaactatgt 1413
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1354 ttcaaacgatcaggggaacattggtcttcaaaatatttggaaataaaagtgtaactatgt 1413


Query: 1414 cttgatatttgataacaacaataatgtggaggacaatcaatattttcataacaaactgcc 1473
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1414 cttgatatttgataacaacaataatgtggaggacaatcaatattttcataacaaactgcc 1473


Query: 1474 attggtcttggtggtaaagttgagccagttgttgtggtacttgatgttgctccaattgta 1533
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1474 attggtcttggtggtaaagttgagccagttgttgtggtacttgatgttgctccaattgta 1533


Query: 1534 gatgaatagatagttgataattcagtggtatggcttacggttgttaggtcagttgtggtt 1593
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1534 gatgaatagatagttgataattcagtggtatggcttacggttgttaggtcagttgtggtt 1593


Query: 1594 gttggaataaatgttgttgaagtagtagatggtg 1627
||||||||||||||||||||||||||||||||||
Sbjct: 1594 gttggaataaatgttgttgaagtagtagatggtg 1627


Score = 379 bits (191), Expect = e-104
Identities = 191/191 (100%)
Strand = Plus / Plus


Query: 171 cataaaaccaccaacaccagttcaaacaaagagtaatgtatcattaattgatgaccaatg 230
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 171 cataaaaccaccaacaccagttcaaacaaagagtaatgtatcattaattgatgaccaatg 230


Query: 231 gaatagcgcaccacaaggtaagaaatcattaatcgatgatgatttcaatggtccatctgt 290
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 231 gaatagcgcaccacaaggtaagaaatcattaatcgatgatgatttcaatggtccatctgt 290


Query: 291 tgcaccacaacaacaaccacatagtacctttgatccatttgttggttcaaaagtaagcag 350
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 291 tgcaccacaacaacaaccacatagtacctttgatccatttgttggttcaaaagtaagcag 350


Query: 351 caatggtgcta 361
|||||||||||
Sbjct: 351 caatggtgcta 361


Score = 172 bits (87), Expect = 1e-42
Identities = 87/87 (100%)
Strand = Plus / Plus


Query: 18 cagaggatattcaactactaacccaagtaatcaatcacatggatttgttagaccatcaat 77
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18 cagaggatattcaactactaacccaagtaatcaatcacatggatttgttagaccatcaat 77


Query: 78 agcaaatggttttgcaacaactgaatt 104
|||||||||||||||||||||||||||
Sbjct: 78 agcaaatggttttgcaacaactgaatt 104


Score = 32.2 bits (16), Expect = 3.5
Identities = 16/16 (100%)
Strand = Plus / Plus


Query: 1425 ataacaacaataatgt 1440
||||||||||||||||
Sbjct: 1126 ataacaacaataatgt 1141


>Contig-U15718-1 (Contig-U15718-1Q) /CSM_Contig/Contig-U15718-1Q.Seq.d
Length = 3745

Score = 44.1 bits (22), Expect = 0.001
Identities = 28/30 (93%)
Strand = Plus / Minus


Query: 1926 atcacattgttttgggaaacataaatcagt 1955
|||||||| || ||||||||||||||||||
Sbjct: 1827 atcacatttttgtgggaaacataaatcagt 1798


>Contig-U11376-1 (Contig-U11376-1Q) /CSM_Contig/Contig-U11376-1Q.Seq.d
Length = 2135

Score = 44.1 bits (22), Expect = 0.001
Identities = 28/30 (93%)
Strand = Plus / Plus


Query: 1059 caaccaaaacaatcacaaccatctcaatca 1088
|||||||| |||||||||||| ||||||||
Sbjct: 176 caaccaaaccaatcacaaccaactcaatca 205


Database: CSM
Posted date: Jun 21, 2004 1:35 PM
Number of letters in database: 8,075,542
Number of sequences in database: 8402

Lambda K H
1.37 0.711 1.31

Gapped
Lambda K H
1.37 0.711 1.31


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 39,616
Number of Sequences: 8402
Number of extensions: 39616
Number of successful extensions: 5344
Number of sequences better than 10.0: 222
length of query: 2186
length of database: 8,075,542
effective HSP length: 17
effective length of query: 2169
effective length of database: 7,932,708
effective search space: 17206043652
effective search space used: 17206043652
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 16 (32.2 bits)
dna update 2009. 1. 8
Homology vs DNA
Query= Contig-U14983-1 (Contig-U14983-1Q) /CSM_Contig/Contig-U14983-1Q.Seq.d
(2186 letters)

Database: ddbj_A
92,845,959 sequences; 95,242,211,685 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value N

(AC116960) Dictyostelium discoideum chromosome 2 map complem... 884 0.0 8
(BJ340123) Dictyostelium discoideum cDNA clone:dda11a22, 3' ... 878 0.0 5
(BJ344054) Dictyostelium discoideum cDNA clone:dda18d09, 3' ... 759 0.0 2
(BJ326856) Dictyostelium discoideum cDNA clone:dda18d09, 5' ... 884 0.0 2
(BJ361218) Dictyostelium discoideum cDNA clone:ddc16a12, 5' ... 367 0.0 7
(BJ364211) Dictyostelium discoideum cDNA clone:ddc30c21, 5' ... 367 e-165 4
(EU024863) Fragaria vesca subsp. americana clone fosmid 52I2... 40 0.52 2
(FC778509) CBGC11181.rev CBGC Lottia gigantea 15h 18h embryo... 32 0.54 3
(FC786911) CBGC1705.fwd CBGC Lottia gigantea 15h 18h embryos... 32 0.79 3
(FC782122) CBGC13511.fwd CBGC Lottia gigantea 15h 18h embryo... 32 0.81 3
(FC782121) CBGC13511.rev CBGC Lottia gigantea 15h 18h embryo... 32 0.81 3
(FC753664) CBBI7491.fwd CBBI Lottia gigantea 26h,37h,61h Lar... 32 0.82 3
(FC753663) CBBI7491.rev CBBI Lottia gigantea 26h,37h,61h Lar... 32 0.82 3
(FC736688) CBBH1730.fwd CBBH Lottia gigantea 26h,37h,61h Lar... 32 0.82 3
(FC736687) CBBH1730.rev CBBH Lottia gigantea 26h,37h,61h Lar... 32 0.82 3
(FC755838) CBBI8980.fwd CBBI Lottia gigantea 26h,37h,61h Lar... 32 0.82 3
(FC755837) CBBI8980.rev CBBI Lottia gigantea 26h,37h,61h Lar... 32 0.82 3
(FC782061) CBGC13470.fwd CBGC Lottia gigantea 15h 18h embryo... 32 0.83 3
(FC782060) CBGC13470.rev CBGC Lottia gigantea 15h 18h embryo... 32 0.83 3
(FC780694) CBGC12602.fwd CBGC Lottia gigantea 15h 18h embryo... 32 0.84 3
(FC806714) CBGC8461.fwd CBGC Lottia gigantea 15h 18h embryos... 32 0.86 3
(FC791937) CBGC21296.fwd CBGC Lottia gigantea 15h 18h embryo... 32 0.86 3
(FC779285) CBGC11700.fwd CBGC Lottia gigantea 15h 18h embryo... 32 0.89 3
(FC722482) CBBG14713.fwd CBBG Lottia gigantea 12,15,18h embr... 32 0.89 3
(FC722481) CBBG14713.rev CBBG Lottia gigantea 12,15,18h embr... 32 0.89 3
(FC787975) CBGC18447.fwd CBGC Lottia gigantea 15h 18h embryo... 32 0.91 3
(FC787974) CBGC18447.rev CBGC Lottia gigantea 15h 18h embryo... 32 0.91 3
(FC779284) CBGC11700.rev CBGC Lottia gigantea 15h 18h embryo... 32 0.91 3
(FC782174) CBGC13543.fwd CBGC Lottia gigantea 15h 18h embryo... 32 1.1 3
(DN740674) 1403168 MARC 7BOV Bos taurus cDNA 3', mRNA sequence. 48 1.4 1
(FC806483) CBGC7909.fwd CBGC Lottia gigantea 15h 18h embryos... 32 1.6 3
(EG663638) RCLGD07TP Castor bean cDNA library from leaves, 1... 38 3.2 3
(FE234000) CAPG2585.fwd CAPG Naegleria gruberi amoeba stage ... 30 3.9 4
(FE247684) CAPH1253.fwd CAPH Naegleria gruberi amoeba stage ... 30 4.4 4
(AZ930230) 474.dhz51b11.s1 Saccharomyces unisporus NRRL Y-15... 46 5.6 1
(FH684113) CHO_OF5071xc12r1.ab1 CHO_OF5 Nicotiana tabacum ge... 46 5.6 1
(EI485677) PV_GBa0099N22.r PV_GBa Phaseolus vulgaris genomic... 46 5.6 1
(BP961316) Euphorbia tirucalli mRNA, clone: ETC047B02, 5' end. 46 5.6 1
(DR172456) HF0004_H16:A Triphysaria versicolor (parasitic pl... 36 6.1 3
(BJ346173) Dictyostelium discoideum cDNA clone:dda30h02, 3' ... 32 7.2 3
(BJ334334) Dictyostelium discoideum cDNA clone:dda45p21, 5' ... 44 7.4 2
(CP000393) Trichodesmium erythraeum IMS101, complete genome. 34 7.6 2
(BJ341642) Dictyostelium discoideum cDNA clone:dda7f14, 3' e... 32 9.1 3

>(AC116960) Dictyostelium discoideum chromosome 2 map
complement(1004496-821614) strain AX4, complete sequence.
Length = 182870

Score = 884 bits (446), Expect(8) = 0.0
Identities = 446/446 (100%)
Strand = Plus / Plus


Query: 669 atgatgaacaatggtggtatgttgaataatggtgttatgatgaacaatggtggtatgatg 728
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 81285 atgatgaacaatggtggtatgttgaataatggtgttatgatgaacaatggtggtatgatg 81344


Query: 729 ccaatgaataatggaggtatgatgggaggatttggtggtatgatgccaatgaataatggt 788
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 81345 ccaatgaataatggaggtatgatgggaggatttggtggtatgatgccaatgaataatggt 81404


Query: 789 ggtatgatgggtggtgctaacaatatgggtggcatgaatttaggaatgaatgctatgtct 848
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 81405 ggtatgatgggtggtgctaacaatatgggtggcatgaatttaggaatgaatgctatgtct 81464


Query: 849 ccaatgggtggtgctccaatgaataacaatatgggcgctatgaatttaggaatgaatgct 908
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 81465 ccaatgggtggtgctccaatgaataacaatatgggcgctatgaatttaggaatgaatgct 81524


Query: 909 atgtctccaatgggtggtgctccaatgaggtcaccagcagctgctggaaataactctttc 968
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 81525 atgtctccaatgggtggtgctccaatgaggtcaccagcagctgctggaaataactctttc 81584


Query: 969 aatattactccaacttctgctactccaactccaccacaaccatctcaattctcttctttg 1028
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 81585 aatattactccaacttctgctactccaactccaccacaaccatctcaattctcttctttg 81644


Query: 1029 gattctttaatgtttacttcatccccatctcaaccaaaacaatcacaaccatctcaatca 1088
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 81645 gattctttaatgtttacttcatccccatctcaaccaaaacaatcacaaccatctcaatca 81704


Query: 1089 tttggtaacaatttcccaatcactgc 1114
||||||||||||||||||||||||||
Sbjct: 81705 tttggtaacaatttcccaatcactgc 81730

Score = 724 bits (365), Expect(8) = 0.0
Identities = 365/365 (100%)
Strand = Plus / Plus


Query: 1769 gaattgatgtagttgtggcctcacttgttataatagaggtggttgtagttgtagttattt 1828
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 82383 gaattgatgtagttgtggcctcacttgttataatagaggtggttgtagttgtagttattt 82442


Query: 1829 ctacacatagacatccaccaccttcacaatatggatatagacagtcatcagttactggac 1888
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 82443 ctacacatagacatccaccaccttcacaatatggatatagacagtcatcagttactggac 82502


Query: 1889 actctacaaaattcgttgtagagtgttcagaattttcatcacattgttttgggaaacata 1948
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 82503 actctacaaaattcgttgtagagtgttcagaattttcatcacattgttttgggaaacata 82562


Query: 1949 aatcagtagtgttacaattactttcatcacatctacaaccggcaatataagcgtgttcac 2008
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 82563 aatcagtagtgttacaattactttcatcacatctacaaccggcaatataagcgtgttcac 82622


Query: 2009 aacaagttccttctgtacaataatcaagtgtacatgcatcaccatcaccacaatctctat 2068
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 82623 aacaagttccttctgtacaataatcaagtgtacatgcatcaccatcaccacaatctctat 82682


Query: 2069 ctgctactacacaggtaccacataaagttctcttttgagaacaacttgttagatcatcaa 2128
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 82683 ctgctactacacaggtaccacataaagttctcttttgagaacaacttgttagatcatcaa 82742


Query: 2129 aacat 2133
|||||
Sbjct: 82743 aacat 82747

Score = 466 bits (235), Expect(8) = 0.0
Identities = 235/235 (100%)
Strand = Plus / Plus


Query: 1356 caaacgatcaggggaacattggtcttcaaaatatttggaaataaaagtgtaactatgtct 1415
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 81970 caaacgatcaggggaacattggtcttcaaaatatttggaaataaaagtgtaactatgtct 82029


Query: 1416 tgatatttgataacaacaataatgtggaggacaatcaatattttcataacaaactgccat 1475
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 82030 tgatatttgataacaacaataatgtggaggacaatcaatattttcataacaaactgccat 82089


Query: 1476 tggtcttggtggtaaagttgagccagttgttgtggtacttgatgttgctccaattgtaga 1535
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 82090 tggtcttggtggtaaagttgagccagttgttgtggtacttgatgttgctccaattgtaga 82149


Query: 1536 tgaatagatagttgataattcagtggtatggcttacggttgttaggtcagttgtg 1590
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 82150 tgaatagatagttgataattcagtggtatggcttacggttgttaggtcagttgtg 82204

Score = 367 bits (185), Expect(8) = 0.0
Identities = 185/185 (100%)
Strand = Plus / Plus


Query: 176 aaccaccaacaccagttcaaacaaagagtaatgtatcattaattgatgaccaatggaata 235
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 80794 aaccaccaacaccagttcaaacaaagagtaatgtatcattaattgatgaccaatggaata 80853


Query: 236 gcgcaccacaaggtaagaaatcattaatcgatgatgatttcaatggtccatctgttgcac 295
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 80854 gcgcaccacaaggtaagaaatcattaatcgatgatgatttcaatggtccatctgttgcac 80913


Query: 296 cacaacaacaaccacatagtacctttgatccatttgttggttcaaaagtaagcagcaatg 355
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 80914 cacaacaacaaccacatagtacctttgatccatttgttggttcaaaagtaagcagcaatg 80973


Query: 356 gtgct 360
|||||
Sbjct: 80974 gtgct 80978

Score = 172 bits (87), Expect(8) = 0.0
Identities = 87/87 (100%)
Strand = Plus / Plus


Query: 18 cagaggatattcaactactaacccaagtaatcaatcacatggatttgttagaccatcaat 77
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 80636 cagaggatattcaactactaacccaagtaatcaatcacatggatttgttagaccatcaat 80695


Query: 78 agcaaatggttttgcaacaactgaatt 104
|||||||||||||||||||||||||||
Sbjct: 80696 agcaaatggttttgcaacaactgaatt 80722

Score = 81.8 bits (41), Expect(8) = 0.0
Identities = 41/41 (100%)
Strand = Plus / Plus


Query: 489 ctggtatgaatagtatgatgggaggtaacaataataacaat 529
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 81106 ctggtatgaatagtatgatgggaggtaacaataataacaat 81146

Score = 40.1 bits (20), Expect(8) = 0.0
Identities = 20/20 (100%)
Strand = Plus / Plus


Query: 2135 atttctacaaataccatcac 2154
||||||||||||||||||||
Sbjct: 82750 atttctacaaataccatcac 82769

Score = 38.2 bits (19), Expect(8) = 0.0
Identities = 19/19 (100%)
Strand = Plus / Plus


Query: 470 gattccctacaccaccaac 488
|||||||||||||||||||
Sbjct: 81088 gattccctacaccaccaac 81106

Score = 105 bits (53), Expect(10) = 3e-47
Identities = 62/65 (95%)
Strand = Plus / Plus


Query: 806 taacaatatgggtggcatgaatttaggaatgaatgctatgtctccaatgggtggtgctcc 865
|||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 81488 taacaatatgggcgctatgaatttaggaatgaatgctatgtctccaatgggtggtgctcc 81547


Query: 866 aatga 870
|||||
Sbjct: 81548 aatga 81552

Score = 69.9 bits (35), Expect(10) = 3e-47
Identities = 38/39 (97%)
Strand = Plus / Plus


Query: 761 tggtggtatgatgccaatgaataatggtggtatgatggg 799
||||||||||||||||||||||||||| |||||||||||
Sbjct: 81332 tggtggtatgatgccaatgaataatggaggtatgatggg 81370

Score = 65.9 bits (33), Expect(10) = 3e-47
Identities = 42/45 (93%)
Strand = Plus / Plus


Query: 708 atgaacaatggtggtatgatgccaatgaataatggaggtatgatg 752
||||| ||||| ||||||||||||||||||||||| |||||||||
Sbjct: 81246 atgaataatggcggtatgatgccaatgaataatggtggtatgatg 81290

Score = 52.0 bits (26), Expect(10) = 3e-47
Identities = 32/34 (94%)
Strand = Plus / Plus


Query: 669 atgatgaacaatggtggtatgttgaataatggtg 702
||||||||||||||||| ||| ||||||||||||
Sbjct: 81195 atgatgaacaatggtggcatgatgaataatggtg 81228

Score = 32.2 bits (16), Expect(10) = 3e-47
Identities = 16/16 (100%)
Strand = Plus / Plus


Query: 514 taacaataataacaat 529
||||||||||||||||
Sbjct: 80564 taacaataataacaat 80579

Score = 32.2 bits (16), Expect(10) = 3e-47
Identities = 16/16 (100%)
Strand = Plus / Plus


Query: 1425 ataacaacaataatgt 1440
||||||||||||||||
Sbjct: 81742 ataacaacaataatgt 81757

Score = 30.2 bits (15), Expect(10) = 3e-47
Identities = 15/15 (100%)
Strand = Plus / Plus


Query: 1003 cacaaccatctcaat 1017
|||||||||||||||
Sbjct: 81688 cacaaccatctcaat 81702

Score = 28.2 bits (14), Expect(10) = 3e-47
Identities = 17/18 (94%)
Strand = Plus / Plus


Query: 258 attaatcgatgatgattt 275
|||||| |||||||||||
Sbjct: 69766 attaattgatgatgattt 69783

Score = 28.2 bits (14), Expect(10) = 3e-47
Identities = 14/14 (100%)
Strand = Plus / Plus


Query: 294 accacaacaacaac 307
||||||||||||||
Sbjct: 71616 accacaacaacaac 71629

Score = 28.2 bits (14), Expect(10) = 3e-47
Identities = 14/14 (100%)
Strand = Plus / Plus


Query: 1815 agttgtagttattt 1828
||||||||||||||
Sbjct: 130275 agttgtagttattt 130288

Score = 105 bits (53), Expect(7) = 7e-36
Identities = 62/65 (95%)
Strand = Plus / Plus


Query: 872 taacaatatgggcgctatgaatttaggaatgaatgctatgtctccaatgggtggtgctcc 931
|||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 81422 taacaatatgggtggcatgaatttaggaatgaatgctatgtctccaatgggtggtgctcc 81481


Query: 932 aatga 936
|||||
Sbjct: 81482 aatga 81486

Score = 65.9 bits (33), Expect(7) = 7e-36
Identities = 36/37 (97%)
Strand = Plus / Plus


Query: 716 tggtggtatgatgccaatgaataatggaggtatgatg 752
||||||||||||||||||||||||||| |||||||||
Sbjct: 81230 tggtggtatgatgccaatgaataatggcggtatgatg 81266

Score = 65.9 bits (33), Expect(7) = 7e-36
Identities = 33/33 (100%)
Strand = Plus / Plus


Query: 765 ggtatgatgccaatgaataatggtggtatgatg 797
|||||||||||||||||||||||||||||||||
Sbjct: 81258 ggtatgatgccaatgaataatggtggtatgatg 81290

Score = 30.2 bits (15), Expect(7) = 7e-36
Identities = 15/15 (100%)
Strand = Plus / Plus


Query: 1072 cacaaccatctcaat 1086
|||||||||||||||
Sbjct: 81619 cacaaccatctcaat 81633

Score = 28.2 bits (14), Expect(7) = 7e-36
Identities = 14/14 (100%)
Strand = Plus / Plus


Query: 297 acaacaacaaccac 310
||||||||||||||
Sbjct: 19611 acaacaacaaccac 19624

Score = 28.2 bits (14), Expect(7) = 7e-36
Identities = 14/14 (100%)
Strand = Plus / Plus


Query: 679 atggtggtatgttg 692
||||||||||||||
Sbjct: 64209 atggtggtatgttg 64222

Score = 26.3 bits (13), Expect(7) = 7e-36
Identities = 13/13 (100%)
Strand = Plus / Plus


Query: 1870 cagtcatcagtta 1882
|||||||||||||
Sbjct: 119883 cagtcatcagtta 119895

Score = 65.9 bits (33), Expect(2) = 2e-16
Identities = 36/37 (97%)
Strand = Plus / Plus


Query: 761 tggtggtatgatgccaatgaataatggtggtatgatg 797
||||||||||||||||||||||||||| |||||||||
Sbjct: 81230 tggtggtatgatgccaatgaataatggcggtatgatg 81266

Score = 54.0 bits (27), Expect(2) = 2e-16
Identities = 27/27 (100%)
Strand = Plus / Plus


Query: 716 tggtggtatgatgccaatgaataatgg 742
|||||||||||||||||||||||||||
Sbjct: 81167 tggtggtatgatgccaatgaataatgg 81193

Score = 69.9 bits (35), Expect(2) = 4e-14
Identities = 38/39 (97%)
Strand = Plus / Plus


Query: 716 tggtggtatgatgccaatgaataatggaggtatgatggg 754
||||||||||||||||||||||||||| |||||||||||
Sbjct: 81377 tggtggtatgatgccaatgaataatggtggtatgatggg 81415

Score = 42.1 bits (21), Expect(2) = 4e-14
Identities = 21/21 (100%)
Strand = Plus / Plus


Query: 669 atgatgaacaatggtggtatg 689
|||||||||||||||||||||
Sbjct: 81321 atgatgaacaatggtggtatg 81341

Score = 61.9 bits (31), Expect = 9e-05
Identities = 34/35 (97%)
Strand = Plus / Plus


Query: 691 tgaataatggtgttatgatgaacaatggtggtatg 725
|||||||||||| ||||||||||||||||||||||
Sbjct: 81271 tgaataatggtggtatgatgaacaatggtggtatg 81305

Score = 58.0 bits (29), Expect = 0.001
Identities = 50/57 (87%)
Strand = Plus / Plus


Query: 672 atgaacaatggtggtatgttgaataatggtgttatgatgaacaatggtggtatgatg 728
||||| |||||||||||| |||| ||||||| |||| |||| ||||||| |||||||
Sbjct: 81270 atgaataatggtggtatgatgaacaatggtggtatgttgaataatggtgttatgatg 81326

Score = 56.0 bits (28), Expect = 0.006
Identities = 28/28 (100%)
Strand = Plus / Plus


Query: 761 tggtggtatgatgccaatgaataatggt 788
||||||||||||||||||||||||||||
Sbjct: 81167 tggtggtatgatgccaatgaataatggt 81194

Lambda K H
1.37 0.711 1.31

Matrix: blastn matrix:1 -3
Number of Sequences: 92845959
Number of Hits to DB: 1,465,611,913
Number of extensions: 84066168
Number of successful extensions: 6354215
Number of sequences better than 10.0: 43
Length of query: 2186
Length of database: 95,242,211,685
Length adjustment: 24
Effective length of query: 2162
Effective length of database: 97,308,875,965
Effective search space: 210381789836330
Effective search space used: 210381789836330
X1: 11 (21.8 bits)
S2: 23 (46.1 bits)

protein update 2009. 7.13
Homology vs Protein
Query= Contig-U14983-1 (Contig-U14983-1Q) /CSM_Contig/Contig-U14983-1Q.Seq.d
(2186 letters)

Database: nrp_B
3,236,559 sequences; 1,051,180,864 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value

(Q54FD8) RecName: Full=Protein psiD; Flags: Precursor; 66 5e-09
(Q1ZXC5) RecName: Full=Protein psiC; Flags: Precursor; 61 1e-07
(Q54C32) RecName: Full=Protein psiQ; Flags: Precursor; 58 2e-06
(Q54C31) RecName: Full=Protein psiR; Flags: Precursor; 57 3e-06
(Q54G85) RecName: Full=Protein psiJ; Flags: Precursor; 54 2e-05
(Q54CH8) RecName: Full=Protein psiN; Flags: Precursor; 54 3e-05
(Q557E9) RecName: Full=Protein psiG; Flags: Precursor; &AC11568... 50 3e-04
AC116984_103(AC116984|pid:none) Dictyostelium discoideum chromos... 49 8e-04
S44208(S44208) extracellular matrix protein B - Dictyostelium mi... 48 0.001
AC117072_61(AC117072|pid:none) Dictyostelium discoideum chromoso... 48 0.002
AM746676_6052(AM746676|pid:none) Sorangium cellulosum 'So ce 56'... 47 0.002
(P11976) RecName: Full=Prestalk protein; AltName: Full=Extracell... 45 0.011
AM746676_2058(AM746676|pid:none) Sorangium cellulosum 'So ce 56'... 44 0.025
A26838(A26838)prestalk protein precursor - slime mold (Dictyoste... 44 0.025
CP000099_1947(CP000099|pid:none) Methanosarcina barkeri str. Fus... 43 0.042
(Q94494) RecName: Full=Protein psiH; Flags: Precursor; &U67940_... 43 0.042
(Q54P69) RecName: Full=Protein psiM; Flags: Precursor; 42 0.071
(Q54VS2) RecName: Full=Protein psiP; Flags: Precursor; 41 0.16
AM746676_3301(AM746676|pid:none) Sorangium cellulosum 'So ce 56'... 41 0.21
S55060(S55060) fertilin alpha-II - crab-eating macaque &X79809_... 39 0.79
Y15520_1(Y15520|pid:none) Papio hamadryas anubis gene encoding f... 39 0.79
AM746676_392(AM746676|pid:none) Sorangium cellulosum 'So ce 56' ... 39 0.79
Y15519_1(Y15519|pid:none) Papio hamadryas anubis gene encoding f... 39 0.79
AM746676_5937(AM746676|pid:none) Sorangium cellulosum 'So ce 56'... 39 0.79
Y15512_1(Y15512|pid:none) Saguinus oedipus gene encoding fertili... 38 1.3
FN357327_12(FN357327|pid:none) Schistosoma mansoni genome sequen... 38 1.3
U82751_1(U82751|pid:none) Oryctolagus cuniculus cellular disinte... 38 1.8
AF258795_1(AF258795|pid:none) Tetrahymena pigmentosa copper-indu... 38 1.8
AL590997_33(AL590997|pid:none) Mouse DNA sequence from clone RP2... 38 1.8
A27020(A27020)DIF-induced prestalk pDd63 protein precursor - sli... 38 1.8
AL592545_3(AL592545|pid:none) Mouse DNA sequence from clone RP23... 38 1.8
CP000251_3627(CP000251|pid:none) Anaeromyxobacter dehalogenans 2... 37 2.3
A55035(A55035;S45034) cysteine-rich protein CRP1 - earthworm (En... 37 2.3
EU733640_1(EU733640|pid:none) Bothrops atrox batroxstatin-2 mRNA... 37 2.3
EU733643_1(EU733643|pid:none) Lachesis muta rhombeata lachestati... 37 2.3
AX393444_1(AX393444|pid:none) Sequence 16 from Patent WO0212283. 37 3.0
CP001131_3666(CP001131|pid:none) Anaeromyxobacter sp. K, complet... 37 3.0
AY262832_1(AY262832|pid:none) Solenopsis invicta vitellogenin re... 37 3.0
FJ039902_1(FJ039902|pid:none) Triticum aestivum DEP1 (DEP1) mRNA... 37 3.0
CP001359_3743(CP001359|pid:none) Anaeromyxobacter dehalogenans 2... 37 3.0
(Q86HT1) RecName: Full=Protein psiL; Flags: Precursor; &AC11695... 37 3.9
CP001033_1257(CP001033|pid:none) Streptococcus pneumoniae CGSP14... 37 3.9
(Q6L8G4) RecName: Full=Keratin-associated protein 5-11; AltName:... 36 5.1
(P98158) RecName: Full=Low-density lipoprotein receptor-related ... 36 5.1
FJ362363_14(FJ362363|pid:none) Caenorhabditis brenneri contig JD... 36 5.1
AY265358_1(AY265358|pid:none) Homo sapiens glycoprotein receptor... 36 6.7
(Q80YX1) RecName: Full=Tenascin; Short=TN; AltName: Ful... 36 6.7
(P17511) RecName: Full=Metallothionein-1; Short=MT-1; A... 36 6.7
BX293980_512(BX293980|pid:none) Mycoplasma mycoides subsp. mycoi... 36 6.7
AM746676_2497(AM746676|pid:none) Sorangium cellulosum 'So ce 56'... 36 6.7
AK295005_1(AK295005|pid:none) Homo sapiens cDNA FLJ61253 complet... 36 6.7
DQ900934_1(DQ900934|pid:none) Ciona intestinalis gamma-carboxygl... 36 6.7
AL732556_3(AL732556|pid:none) Mouse DNA sequence from clone RP24... 36 6.7
DQ295883_1(DQ295883|pid:none) Glossina morsitans morsitans patte... 36 6.7
AY265357_1(AY265357|pid:none) Homo sapiens glycoprotein receptor... 36 6.7
AL732556_1(AL732556|pid:none) Mouse DNA sequence from clone RP24... 36 6.7
(P82942) RecName: Full=Hemorrhagic metalloproteinase-disintegrin... 35 8.7
FJ039903_1(FJ039903|pid:none) Hordeum vulgare DEP1 (DEP1) mRNA, ... 35 8.7
(Q9DGB9) RecName: Full=Zinc metalloproteinase-disintegrin VAP1; ... 35 8.7
EU572718_1(EU572718|pid:none) Toxoplasma gondii MIC3 protein gen... 35 8.7
AB264320_1(AB264320|pid:none) Dorcus curvidens binodulosus dcbAF... 35 8.7
AE014298_2399(AE014298|pid:none) Drosophila melanogaster chromos... 35 8.7
AE014298_2400(AE014298|pid:none) Drosophila melanogaster chromos... 35 8.7
BX649457_6(BX649457|pid:none) Zebrafish DNA sequence from clone ... 35 8.7
AY255004_1(AY255004|pid:none) Bothrops jararacussu metalloprotea... 35 8.7
AY566610_1(AY566610|pid:none) Deinagkistrodon acutus acurhagin p... 35 8.7
CP000251_2747(CP000251|pid:none) Anaeromyxobacter dehalogenans 2... 35 8.7

>(Q54FD8) RecName: Full=Protein psiD; Flags: Precursor;
Length = 504

Score = 66.2 bits (160), Expect = 5e-09
Identities = 29/85 (34%), Positives = 43/85 (50%), Gaps = 3/85 (3%)
Frame = -1

Query: 2081 CVVADRDCGDGDACTLDYCTEGTCCEHAYIAGC-RCDE-SNCNTTDLCFPKQCD-ENSEH 1911
C+ ++C D D CT D+C C + C C+ C T DLCFP++C+ +
Sbjct: 307 CLAIPKNCNDNDPCTTDHCDPAIGCYYDKFDNCDACNAVDTCITNDLCFPRECNPRGNPP 366

Query: 1910 STTNFVECPVTDDCLYPYCEGGGCL 1836
N + C TD C++ YCE G C+
Sbjct: 367 CLINPINCTSTDPCIFSYCENGVCI 391

Lambda K H
0.318 0.134 0.401

Gapped
Lambda K H
0.267 0.0410 0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3236559
Number of Hits to DB: 1,889,992,677
Number of extensions: 29707566
Number of successful extensions: 81471
Number of sequences better than 10.0: 67
Number of HSP's gapped: 80907
Number of HSP's successfully gapped: 150
Length of query: 728
Length of database: 1,051,180,864
Length adjustment: 136
Effective length of query: 592
Effective length of database: 611,008,840
Effective search space: 361717233280
Effective search space used: 361717233280
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)

PSORT

psg: 0.75 gvh: 0.26 alm: 0.46 top: 0.53 tms: 0.00 mit: -0.40 mip: 0.00
nuc: 0.00 erl: 0.00 erm: 0.00 pox: 0.00 px2: 0.00 vac: 0.00 rnp: 0.00
act: 0.00 caa: 0.00 yqr: 0.00 tyr: 0.00 leu: 0.00 gpi: 0.00 myr: 0.00
dna: 0.00 rib: 0.00 bac: 0.00 m1a: 0.00 m1b: 0.00 m2 : 0.00 mNt: 0.00
m3a: 0.00 m3b: 0.00 m_ : 1.00

48.0 %: nuclear
24.0 %: cytoplasmic
8.0 %: mitochondrial
8.0 %: vesicles of secretory system
4.0 %: cytoskeletal
4.0 %: Golgi
4.0 %: vacuolar

>> prediction for Contig-U14983-1 is nuc

VS (DIR, S) 0
VH (FL, L) 0
VF (FL, S) 0
AH (FL, L) 0
AF (FL, S) 2
SL (DIR, L) 0
SS (DIR, S) 0
SH (FL, L) 0
SF (FL, S) 0
CH (FL, L) 1
CF (FL, S) 1
FCL (DIR, L) 0
FC (DIR, S) 0
FC-IC (SUB) 0