Contig-U14954-1
Contig ID Contig-U14954-1
Contig update 2004. 6.11
Contig sequence
>Contig-U14954-1 (Contig-U14954-1Q) /CSM_Contig/Contig-U14954-1Q.Seq.d
AAAAATTTTTTTATTTTTTTTTATTTTTTTTTCCATCAAAATCGTTTTTA
AAATACTTTTTTATTTTTTTAAAATTTTTTTTTTAAATGATTAAAAATGA
TTAAAAAAAGTGCATTAATAACATTATTTTTAGTTTCACTAATTTTGGGT
GTTTCTTTATCCCAAAAACCATTTTATTGCCAAGCACCAGAACCAACACC
AAGTTTAAATACAGATGGATTAACATTAAAGATGGTACAAATTTTAACAA
GACATGGTGATAGAACACCATTGTATAGTACATTAAAACCAACAATGAAT
ACATGGGATTGTAATTTAGGATGGTTAATGGTATCAAGTTTAAATAATGT
ACCAGGAGCAGCAACAGATGTTGATAGATTATTTAGAAAAGTTTATATGC
CAAATAGAGAATATTTCCCAGGTAATTGTTCAGACGGTCAATTGACCTCA
CTTGGATTCCAACAACATTTACAATTAGGTCAAAGTTTACGTCAACTCTA
CGTTGATAAATATGAATTATTACCAAGTGAATTATCAGTGGATGCAGCAT
CAACCATTTGGGTTCGTTCAACCCGATGTACCAAGAACCATTCAATCGGT
TCAAGGTCATTTAACTGCTTTATTCCCACCAACCACCGTTACAAGTGGTT
CAGGTATTCCAATTATCAATATCAATACAATGGATAACTATTATGAAAAT
ATGACACCAAATCCAACTCTTTGCCCAGAGTTGGCTGTTTTGATCGCCAA
TACTACCACCACACCAGAGTGGGGGGAATTCATTACCAACACCACCCAAT
TAAAAGAGGATGTTATGGAAACATTGGGTATCTCTGTATTCCCAGGTTGG
AGTTCATTAATGGATTTATTCTTTGCAACTCAATGTCACGATTTCCCATT
ACCAGAGGGTGTCACTCAAGATATGGTCACTCAAGTCTATGAAGCTGCCT
ATTGGCAATACCAATATCAACTCTCTTTCCCAATGATTGCTCGTCTTGGT
ATGTCTACTTTCTTAGAGGAGGTAGTCGATAATATTAGAGCTTTTGTTAA
TGGTACTTCCTCTGTCAAATATATCGTTTTCTCTGGTCATGATGATTCAG
TTGGTCCATTCACTAATTTATTTGGTCTCATGAAAGAATGGCCACCTTAT
GCTTCACATGTTGAACTTGAATTGTGGTCTGATGAAAAAGATAATTATTT
CCTCCAATTTAAATTTAATGGTCAAAGTTATACATTAAATGGTTGTGAAG
ATGTTATGTGCCCAATTGATTCATTCTTTGAAACTGCATACTCAATTTTA
GTTCCAAATTATGCTGATGCATGTTCAAATTCAACAATGACATTTTAATT
TTAACAAAAAAACCCTCCGATTTCTTAATTTTTGGAATTATAAATAAAAA
AAAAAAAAAATAAAAATATTTAAAAAAAACTAAAA

Gap no gap
Contig length 1435
Chromosome number (1..6, M) 4
Chromosome length 5430582
Start point 1898091
End point 1896657
Strand (PLUS/MINUS) MINUS
Number of clones 54
Number of EST 82
Link to clone list U14954
List of clone(s)

est1=VFA307F,1,487
est2=SFH361F,5,520
est3=AFC648F,23,604
est4=AFE165F,23,601
est5=AFE265F,23,349
est6=AFF351F,23,230
est7=SFJ573F,23,347
est8=SFK652F,23,601
est9=AFC521F,24,508
est10=AFC522F,24,492
est11=SFB453F,34,554
est12=CFE268F,35,585
est13=AFI683F,37,555
est14=VFD727F,38,528
est15=VFN436F,45,635
est16=AFH823F,61,621
est17=SFA677F,67,602
est18=VFC180F,68,461
est19=VFM877F,69,714
est20=VFB114F,71,601
est21=VFB228F,71,620
est22=CHD582F,73,709
est23=SFI162F,75,556
est24=SFI657F,83,713
est25=SFD510F,84,717
est26=SFH349F,84,725
est27=SFK726F,84,642
est28=CFA408F,85,602
est29=CFB709F,85,712
est30=VFJ196F,85,721
est31=VFJ219F,85,716
est32=VFM810F,85,723
est33=VFN564F,85,659
est34=VHP773F,85,644
est35=VFA392F,88,715
est36=SFE119F,89,642
est37=VFB675E,89,1377
est38=VFF366F,89,641
est39=AFD586F,90,639
est40=CFA225F,90,716
est41=SFI824F,90,647
est42=VFG714F,92,587
est43=VFL178F,92,654
est44=AFJ692F,93,711
est45=VFG445F,93,634
est46=SFG207F,100,659
est47=SLB609F,102,613
est48=SLK320F,104,203
est49=VFC875F,110,605
est50=SFB715F,139,646
est51=VFG714Z,622,1379
est52=AFO855Z,645,1374
est53=SFK652Z,650,1380
est54=SFK726Z,690,1341
est55=CFA225Z,692,1375
est56=CHD582Z,692,1377
est57=VFB228Z,692,1377
est58=VFM810Z,692,1377
est59=SFI657Z,694,1380
est60=VFB114Z,694,1377
est61=VFG445Z,694,1378
est62=SFI824Z,695,1380
est63=VFN137Z,721,1390
est64=VHP773Z,723,1390
est65=CFE268Z,735,1364
est66=CFA408Z,736,1376
est67=VFC875Z,736,1377
est68=VFL178Z,740,1384
est69=AFD586Z,741,1375
est70=AFC648Z,743,1374
est71=SFE119Z,748,1378
est72=SFH349Z,749,1379
est73=SLB422Z,860,1435
est74=VFN564Z,876,1314
est75=SLC315Z,897,1434
est76=SLB609Z,969,1399
est77=VFA307Z,973,1171
est78=SFI162Z,995,1171
est79=VFF366Z,1018,1367
est80=SFA677Z,1086,1364
est81=VFC180Z,1111,1367
est82=SLK320Z,1240,1400
Translated Amino Acid sequence
kiflfffiffsikivfkilfyffkifflnd*k*lkkvh**hyf*fh*fwvflypknhfia
khqnqhqv*iqmd*h*rwykf*qdmviehhcivh*nqq*ihgivi*dg*wyqv*imyqeq
qqmlidylekficqienisqvivqtvn*phldsnniyn*VKVYVNSTLINMNYYQVNYQW
MQHQPFGFVQPDVPRTIQSVQGHLTALFPPTTVTSGSGIPIININTMDNYYENMTPNPTL
CPELAVLIANTTTTPEWGEFITNTTQLKEDVMETLGISVFPGWSSLMDLFFATQCHDFPL
PEGVTQDMVTQVYEAAYWQYQYQLSFPMIARLGMSTFLEEVVDNIRAFVNGTSSVKYIVF
SGHDDSVGPFTNLFGLMKEWPPYASHVELELWSDEKDNYFLQFKFNGQSYTLNGCEDVMC
PIDSFFETAYSILVPNYADACSNSTMTF*f*qknppis*flel*ikkkknkni*kklk


Translated Amino Acid sequence (All Frames)
Frame A:
knffiffyfffhqnrf*ntflff*nfffk*lkmikksalitlflvslilgvslsqkpfyc
qapeptpslntdgltlkmvqiltrhgdrtplystlkptmntwdcnlgwlmvsslnnvpga
atdvdrlfrkvympnreyfpgncsdgqltslgfqqhlqlgqslrqlyvdkyellpselsv
daastiwvrstrctknhsigsrsfncfiptnhrykwfrysnyqyqyng*ll*kydtksns
lprvgcfdrqyyhhtrvggihyqhhpikrgcygnigylciprlefingfilcnsmsrfpi
trgchsryghssl*scllaipistlfpndcsswyvyflrggsr*y*sfc*wyflcqiyrf
lws**fswsih*fiwshermatlcftc*t*ivv**kr*lfppi*i*wsklyikwl*rcyv
pn*fil*ncilnfssklc*cmfkfnndililtkkpsdflifgiinkkkkk*kylkktk


Frame B:
kiflfffiffsikivfkilfyffkifflnd*k*lkkvh**hyf*fh*fwvflypknhfia
khqnqhqv*iqmd*h*rwykf*qdmviehhcivh*nqq*ihgivi*dg*wyqv*imyqeq
qqmlidylekficqienisqvivqtvn*phldsnniyn*VKVYVNSTLINMNYYQVNYQW
MQHQPFGFVQPDVPRTIQSVQGHLTALFPPTTVTSGSGIPIININTMDNYYENMTPNPTL
CPELAVLIANTTTTPEWGEFITNTTQLKEDVMETLGISVFPGWSSLMDLFFATQCHDFPL
PEGVTQDMVTQVYEAAYWQYQYQLSFPMIARLGMSTFLEEVVDNIRAFVNGTSSVKYIVF
SGHDDSVGPFTNLFGLMKEWPPYASHVELELWSDEKDNYFLQFKFNGQSYTLNGCEDVMC
PIDSFFETAYSILVPNYADACSNSTMTF*f*qknppis*flel*ikkkknkni*kklk


Frame C:
kffyfflfffpsksflkyffiflkfff*miknd*kkcinniifsftnfgcffipktillp
strtntkfkyrwinikdgtnfnktw**ntiv*yiktnneymgl*frmvngikfk*ctrss
nrc**ii*kslyak*rifpr*lfrrsidltwipttftirskftstlr**i*iitk*iisg
csinhlgsfnpmyqepfnrfkvi*llyshqpplqvvqvfqlsisiqwitimki*hqiqlf
aqswlf*spilpphqsggnslptppn*krmlwkhwvslysqvgvh*wiyslqlnvtishy
qrvslkiwslksmklpigntninslsq*llvlvclls*rr*siilelllmvlplsnisfs
lvmmiqlvhsliylvs*knghlmlhmlnlncglmkkiiissnlnlmvkvih*mvvkmlca
qlihslklhtqf*fqimlmhvqiqq*hfnfnkktlrflnfwnyk*kkkkikifkkn*


own update 2004. 6.23
Homology vs CSM-cDNA
Query= Contig-U14954-1 (Contig-U14954-1Q)
/CSM_Contig/Contig-U14954-1Q.Seq.d
(1435 letters)

Database: CSM
8402 sequences; 8,075,542 total letters


Score E
Sequences producing significant alignments: (bits) Value

Contig-U14954-1 (Contig-U14954-1Q) /CSM_Contig/Conti... 2508 0.0
Contig-U16059-1 (Contig-U16059-1Q) /CSM_Contig/Conti... 36 0.15
Contig-U15741-1 (Contig-U15741-1Q) /CSM_Contig/Conti... 36 0.15
Contig-U15729-1 (Contig-U15729-1Q) /CSM_Contig/Conti... 36 0.15
Contig-U14303-1 (Contig-U14303-1Q) /CSM_Contig/Conti... 36 0.15
Contig-U13976-1 (Contig-U13976-1Q) /CSM_Contig/Conti... 36 0.15
Contig-U12817-1 (Contig-U12817-1Q) /CSM_Contig/Conti... 36 0.15
Contig-U11922-1 (Contig-U11922-1Q) /CSM_Contig/Conti... 36 0.15
Contig-U04380-1 (Contig-U04380-1Q) /CSM_Contig/Conti... 36 0.15
Contig-U16379-1 (Contig-U16379-1Q) /CSM_Contig/Conti... 34 0.57

>Contig-U14954-1 (Contig-U14954-1Q) /CSM_Contig/Contig-U14954-1Q.Seq.d
Length = 1435

Score = 2508 bits (1265), Expect = 0.0
Identities = 1293/1307 (98%)
Strand = Plus / Plus


Query: 85 aaatgattaaaaatgattnnnnnnngtgcattaataacattatttttagtttcactaatt 144
|||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 85 aaatgattaaaaatgattaaaaaaagtgcattaataacattatttttagtttcactaatt 144


Query: 145 ttgggtgtttctttatcccaaaaaccattttattgccaagcaccagaaccaacaccaagt 204
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 145 ttgggtgtttctttatcccaaaaaccattttattgccaagcaccagaaccaacaccaagt 204


Query: 205 ttaaatacagatggattaacattaaagatggtacaaattttaacaagacatggtgataga 264
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 ttaaatacagatggattaacattaaagatggtacaaattttaacaagacatggtgataga 264


Query: 265 acaccattgtatagtacattaaaaccaacaatgaatacatgggattgtaatttaggatgg 324
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 acaccattgtatagtacattaaaaccaacaatgaatacatgggattgtaatttaggatgg 324


Query: 325 ttaatggtatcaagtttaaataatgtaccaggagcagcaacagatgttgatagattattt 384
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 ttaatggtatcaagtttaaataatgtaccaggagcagcaacagatgttgatagattattt 384


Query: 385 agaaaagtttatatgccaaatagagaatatttcccaggtaattgttcagacggtcaattg 444
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 agaaaagtttatatgccaaatagagaatatttcccaggtaattgttcagacggtcaattg 444


Query: 445 acctcacttggattccaacaacatttacaattaggtcaaagtttacgtcaactctacgtt 504
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 acctcacttggattccaacaacatttacaattaggtcaaagtttacgtcaactctacgtt 504


Query: 505 gataaatatgaattattaccaagtgaattatcagtggatgcagcatcaaccatttgggtt 564
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 gataaatatgaattattaccaagtgaattatcagtggatgcagcatcaaccatttgggtt 564


Query: 565 cgttcaacccgatgtaccaagaaccattcaatcggttcaaggtcatttaactgctttatt 624
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 cgttcaacccgatgtaccaagaaccattcaatcggttcaaggtcatttaactgctttatt 624


Query: 625 cccaccaaccaccgttacaagtggttcaggtattccaattatcaatatcaatacaatgga 684
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 cccaccaaccaccgttacaagtggttcaggtattccaattatcaatatcaatacaatgga 684


Query: 685 taactattatgaaaatatgacaccaaatccaactctttgcccagagttggctgttttgat 744
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 taactattatgaaaatatgacaccaaatccaactctttgcccagagttggctgttttgat 744


Query: 745 cgccaatactaccaccacaccagagtggggggaattcattaccaacaccacccaattaaa 804
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 cgccaatactaccaccacaccagagtggggggaattcattaccaacaccacccaattaaa 804


Query: 805 agaggatgttatggaaacattgggtatctctgtattcccaggttggagttcattaatgga 864
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 805 agaggatgttatggaaacattgggtatctctgtattcccaggttggagttcattaatgga 864


Query: 865 tttattctttgcaactcaatgtcacgatttcccattaccagagggtgtcactcaagatat 924
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 865 tttattctttgcaactcaatgtcacgatttcccattaccagagggtgtcactcaagatat 924


Query: 925 ggtcactcaagtctatgaagctgcctattggcaataccaatatcaactctctttcccaat 984
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 925 ggtcactcaagtctatgaagctgcctattggcaataccaatatcaactctctttcccaat 984


Query: 985 gattgctcgtcttggtatgtctactttcttagaggaggtagtcgataatattagagcttt 1044
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 985 gattgctcgtcttggtatgtctactttcttagaggaggtagtcgataatattagagcttt 1044


Query: 1045 tgttaatggtacttcctctgtcaaatatatcgttttctctggtcatgatgattcagttgg 1104
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1045 tgttaatggtacttcctctgtcaaatatatcgttttctctggtcatgatgattcagttgg 1104


Query: 1105 tccattcactaatttatttggtctcatgaaagaatggccaccttatgcttcacatgttga 1164
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1105 tccattcactaatttatttggtctcatgaaagaatggccaccttatgcttcacatgttga 1164


Query: 1165 acttgaattgtggtctgatgaaaaagataattatttcctccaatttaaatttaatggtca 1224
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1165 acttgaattgtggtctgatgaaaaagataattatttcctccaatttaaatttaatggtca 1224


Query: 1225 aagttatacattaaatggttgtgaagatgttatgtgcccaattgattcattctttgaaac 1284
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1225 aagttatacattaaatggttgtgaagatgttatgtgcccaattgattcattctttgaaac 1284


Query: 1285 tgcatactcaattttagttccaaattatgctgatgcatgttcaaattcaacaatgacatt 1344
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1285 tgcatactcaattttagttccaaattatgctgatgcatgttcaaattcaacaatgacatt 1344


Query: 1345 ttaattttaacnnnnnnnccctccgatttcttaatttttggaattat 1391
||||||||||| |||||||||||||||||||||||||||||
Sbjct: 1345 ttaattttaacaaaaaaaccctccgatttcttaatttttggaattat 1391


Score = 48.1 bits (24), Expect = 4e-05
Identities = 24/24 (100%)
Strand = Plus / Plus


Query: 33 ccatcaaaatcgtttttaaaatac 56
||||||||||||||||||||||||
Sbjct: 33 ccatcaaaatcgtttttaaaatac 56


>Contig-U16059-1 (Contig-U16059-1Q) /CSM_Contig/Contig-U16059-1Q.Seq.d
Length = 2537

Score = 36.2 bits (18), Expect = 0.15
Identities = 21/22 (95%)
Strand = Plus / Plus


Query: 1333 aacaatgacattttaattttaa 1354
|||||||||||| |||||||||
Sbjct: 362 aacaatgacattgtaattttaa 383


>Contig-U15741-1 (Contig-U15741-1Q) /CSM_Contig/Contig-U15741-1Q.Seq.d
Length = 2458

Score = 36.2 bits (18), Expect = 0.15
Identities = 18/18 (100%)
Strand = Plus / Minus


Query: 1267 tgattcattctttgaaac 1284
||||||||||||||||||
Sbjct: 751 tgattcattctttgaaac 734


Database: CSM
Posted date: Jun 21, 2004 1:35 PM
Number of letters in database: 8,075,542
Number of sequences in database: 8402

Lambda K H
1.37 0.711 1.31

Gapped
Lambda K H
1.37 0.711 1.31


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 23,384
Number of Sequences: 8402
Number of extensions: 23384
Number of successful extensions: 2482
Number of sequences better than 10.0: 242
length of query: 1435
length of database: 8,075,542
effective HSP length: 16
effective length of query: 1419
effective length of database: 7,941,110
effective search space: 11268435090
effective search space used: 11268435090
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 15 (30.2 bits)
dna update 2009. 1. 6
Homology vs DNA
Query= Contig-U14954-1 (Contig-U14954-1Q) /CSM_Contig/Contig-U14954-1Q.Seq.d
(1435 letters)

Database: ddbj_A
92,845,959 sequences; 95,242,211,685 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value N

(DQ143912) Dictyostelium discoideum CF60 (cf60) mRNA, comple... 1538 0.0 2
(BJ431432) Dictyostelium discoideum cDNA clone:ddv14l03, 3' ... 1499 0.0 1
(BJ401232) Dictyostelium discoideum cDNA clone:dds22g14, 3' ... 1431 0.0 1
(BJ346364) Dictyostelium discoideum cDNA clone:dda30n14, 3' ... 1390 0.0 2
(BJ376747) Dictyostelium discoideum cDNA clone:ddc29c21, 3' ... 1360 0.0 1
(BJ429762) Dictyostelium discoideum cDNA clone:ddv4e20, 3' e... 1358 0.0 2
(BJ403075) Dictyostelium discoideum cDNA clone:dds18p06, 3' ... 1358 0.0 1
(BJ435087) Dictyostelium discoideum cDNA clone:ddv26d04, 3' ... 1356 0.0 1
(BJ431240) Dictyostelium discoideum cDNA clone:ddv13j12, 3' ... 1354 0.0 1
(BJ402856) Dictyostelium discoideum cDNA clone:dds18a16, 3' ... 1352 0.0 1
(BJ435506) Dictyostelium discoideum cDNA clone:ddv27i09, 3' ... 1312 0.0 1
(BJ371724) Dictyostelium discoideum cDNA clone:ddc1a08, 3' e... 1281 0.0 2
(BJ434098) Dictyostelium discoideum cDNA clone:ddv23k19, 3' ... 1277 0.0 1
(BJ430313) Dictyostelium discoideum cDNA clone:ddv6f20, 3' e... 1271 0.0 1
(BJ429391) Dictyostelium discoideum cDNA clone:ddv3g08, 3' e... 1267 0.0 2
(BJ429335) Dictyostelium discoideum cDNA clone:ddv3k03, 3' e... 1251 0.0 3
(BJ400938) Dictyostelium discoideum cDNA clone:dds15b13, 3' ... 1249 0.0 1
(BJ400167) Dictyostelium discoideum cDNA clone:dds9e05, 3' e... 1249 0.0 1
(BJ374645) Dictyostelium discoideum cDNA clone:ddc9g18, 3' e... 1249 0.0 1
(BJ446442) Dictyostelium discoideum cDNA clone:ddv62b19, 3' ... 1219 0.0 2
(BJ391185) Dictyostelium discoideum cDNA clone:dds15b13, 5' ... 1217 0.0 2
(BJ416631) Dictyostelium discoideum cDNA clone:ddv26d04, 5' ... 1215 0.0 2
(BJ414642) Dictyostelium discoideum cDNA clone:ddv19o23, 5' ... 1203 0.0 1
(BJ388119) Dictyostelium discoideum cDNA clone:dds8c03, 5' e... 1201 0.0 2
(BJ416578) Dictyostelium discoideum cDNA clone:ddv26j20, 5' ... 1197 0.0 2
(BJ358364) Dictyostelium discoideum cDNA clone:ddc1a08, 5' e... 1195 0.0 1
(BJ371721) Dictyostelium discoideum cDNA clone:ddc1p02, 3' e... 1193 0.0 2
(BJ341949) Dictyostelium discoideum cDNA clone:dda8k21, 3' e... 1193 0.0 2
(BJ341390) Dictyostelium discoideum cDNA clone:dda6o12, 3' e... 1172 0.0 2
(BJ410787) Dictyostelium discoideum cDNA clone:ddv1h23, 5' e... 1144 0.0 2
(AU033772) Dictyostelium discoideum slug cDNA, clone SLB422. 1059 0.0 1
(BJ427539) Dictyostelium discoideum cDNA clone:ddv62b19, 5' ... 1053 0.0 2
(BJ412918) Dictyostelium discoideum cDNA clone:ddv13j12, 5' ... 1041 0.0 1
(BJ390398) Dictyostelium discoideum cDNA clone:dds22d07, 5' ... 1041 0.0 2
(BJ389369) Dictyostelium discoideum cDNA clone:dds18a16, 5' ... 1033 0.0 3
(BJ415830) Dictyostelium discoideum cDNA clone:ddv23k19, 5' ... 920 0.0 2
(BJ410179) Dictyostelium discoideum cDNA clone:ddv11d17, 5' ... 920 0.0 3
(BJ391313) Dictyostelium discoideum cDNA clone:dds13m02, 5' ... 920 0.0 2
(BJ364063) Dictyostelium discoideum cDNA clone:ddc29c21, 5' ... 920 0.0 3
(BJ414404) Dictyostelium discoideum cDNA clone:ddv19e06, 5' ... 914 0.0 2
(BJ417762) Dictyostelium discoideum cDNA clone:ddv28o15, 5' ... 912 0.0 3
(BJ360057) Dictyostelium discoideum cDNA clone:ddc4b03, 5' e... 912 0.0 2
(BJ327547) Dictyostelium discoideum cDNA clone:dda20g24, 5' ... 912 0.0 2
(BJ411531) Dictyostelium discoideum cDNA clone:ddv4e20, 5' e... 898 0.0 3
(BJ401140) Dictyostelium discoideum cDNA clone:dds22d07, 3' ... 872 0.0 2
(BJ389290) Dictyostelium discoideum cDNA clone:dds18p06, 5' ... 848 0.0 2
(BJ388337) Dictyostelium discoideum cDNA clone:dds9e05, 5' e... 920 0.0 2
(BJ326359) Dictyostelium discoideum cDNA clone:dda16n06, 5' ... 1015 0.0 2
(BJ324957) Dictyostelium discoideum cDNA clone:dda8k21, 5' e... 912 0.0 2
(BJ411181) Dictyostelium discoideum cDNA clone:ddv3g08, 5' e... 920 0.0 3
(BJ416799) Dictyostelium discoideum cDNA clone:ddv27h10, 5' ... 886 0.0 3
(BJ330167) Dictyostelium discoideum cDNA clone:dda27i13, 5' ... 886 0.0 3
(BJ325061) Dictyostelium discoideum cDNA clone:dda9a17, 5' e... 959 0.0 2
(BJ390478) Dictyostelium discoideum cDNA clone:dds22g14, 5' ... 957 0.0 2
(BJ387478) Dictyostelium discoideum cDNA clone:dds2i20, 5' e... 920 0.0 3
(BJ387681) Dictyostelium discoideum cDNA clone:dds4n03, 5' e... 833 0.0 3
(AU034243) Dictyostelium discoideum slug cDNA, clone SLC315. 965 0.0 1
(BJ412057) Dictyostelium discoideum cDNA clone:ddv6f20, 5' e... 920 0.0 2
(BJ411137) Dictyostelium discoideum cDNA clone:ddv3k03, 5' e... 914 0.0 2
(BJ358361) Dictyostelium discoideum cDNA clone:ddc1p02, 5' e... 912 0.0 2
(BJ413092) Dictyostelium discoideum cDNA clone:ddv14l03, 5' ... 948 0.0 1
(AU060824) Dictyostelium discoideum slug cDNA, clone SLB609. 801 0.0 3
(BJ324469) Dictyostelium discoideum cDNA clone:dda6o12, 5' e... 880 0.0 3
(BJ361049) Dictyostelium discoideum cDNA clone:ddc9g18, 5' e... 898 0.0 2
(BJ327000) Dictyostelium discoideum cDNA clone:dda18e22, 5' ... 884 0.0 2
(BJ387597) Dictyostelium discoideum cDNA clone:dds3j14, 5' e... 874 0.0 2
(BJ389136) Dictyostelium discoideum cDNA clone:dds17k15, 5' ... 769 0.0 2
(BJ435858) Dictyostelium discoideum cDNA clone:ddv28o15, 3' ... 856 0.0 1
(BJ412401) Dictyostelium discoideum cDNA clone:ddv8f07, 5' e... 831 0.0 2
(AU033915) Dictyostelium discoideum slug cDNA, clone SLB609. 842 0.0 1
(BJ324397) Dictyostelium discoideum cDNA clone:dda6i05, 5' e... 728 0.0 2
(BJ391207) Dictyostelium discoideum cDNA clone:dds15j15, 5' ... 714 0.0 2
(BJ411820) Dictyostelium discoideum cDNA clone:ddv5o19, 5' e... 698 0.0 2
(BJ324405) Dictyostelium discoideum cDNA clone:dda6k05, 5' e... 684 0.0 2
(BJ410606) Dictyostelium discoideum cDNA clone:ddv1n01, 5' e... 638 0.0 2
(BJ428326) Dictyostelium discoideum cDNA clone:ddv11d17, 3' ... 541 e-153 2
(BJ430060) Dictyostelium discoideum cDNA clone:ddv5o19, 3' e... 385 e-133 2
(BJ389971) Dictyostelium discoideum cDNA clone:dds20a19, 5' ... 470 e-132 2
(BJ398877) Dictyostelium discoideum cDNA clone:dds2i20, 3' e... 460 e-125 1
(BJ325062) Dictyostelium discoideum cDNA clone:dda9a18, 5' e... 422 e-118 2
(BJ428770) Dictyostelium discoideum cDNA clone:ddv1n01, 3' e... 313 1e-80 1
(AU053970) Dictyostelium discoideum slug cDNA, clone SLK320. 307 6e-79 1
(BJ323645) Dictyostelium discoideum cDNA clone:dda11f13, 5' ... 224 7e-54 1
(AU060534) Dictyostelium discoideum slug cDNA, clone SLK320. 182 2e-41 1
(BJ402665) Dictyostelium discoideum cDNA clone:dds17k15, 3' ... 167 1e-36 1
(AC219423) Bos taurus clone CH240-339N8, WORKING DRAFT SEQUE... 34 0.14 2
(AC167354) Bos taurus clone CH240-185G5, WORKING DRAFT SEQUE... 34 0.14 2
(CU914217) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 36 0.51 2
(CU606986) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 36 0.52 2
(EJ177697) 1092344107104 Global-Ocean-Sampling_GS-27-01-01-1... 48 0.93 1
(BH462778) BOHPM29TF BOHP Brassica oleracea genomic clone BO... 42 1.1 2
(AX458609) Sequence 155 from Patent WO0246454. 42 2.6 2
(AB170129) Macaca fascicularis brain cDNA clone: QbsB-10361,... 46 3.7 1
(AP008207) Oryza sativa (japonica cultivar-group) genomic DN... 46 3.7 1
(AP002953) Oryza sativa Japonica Group genomic DNA, chromoso... 46 3.7 1
(CU855866) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 46 3.7 1
(AC204582) Zea mays chromosome 6 clone CH201-319L2; ZMMBBc03... 46 3.7 1
(AC186898) Zea mays chromosome 6 clone CH201-37I9; ZMMBBc003... 46 3.7 1
(ER473591) 1092963978570 Global-Ocean-Sampling_GS-35-01-01-1... 46 3.7 1
(EB820198) ZM_BFb0379D03.f ZM_BFb Zea mays cDNA 3', mRNA seq... 46 3.7 1

>(DQ143912) Dictyostelium discoideum CF60 (cf60) mRNA, complete cds.
Length = 1251

Score = 1538 bits (776), Expect(2) = 0.0
Identities = 776/776 (100%)
Strand = Plus / Plus


Query: 573 ccgatgtaccaagaaccattcaatcggttcaaggtcatttaactgctttattcccaccaa 632
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 476 ccgatgtaccaagaaccattcaatcggttcaaggtcatttaactgctttattcccaccaa 535


Query: 633 ccaccgttacaagtggttcaggtattccaattatcaatatcaatacaatggataactatt 692
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 536 ccaccgttacaagtggttcaggtattccaattatcaatatcaatacaatggataactatt 595


Query: 693 atgaaaatatgacaccaaatccaactctttgcccagagttggctgttttgatcgccaata 752
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 596 atgaaaatatgacaccaaatccaactctttgcccagagttggctgttttgatcgccaata 655


Query: 753 ctaccaccacaccagagtggggggaattcattaccaacaccacccaattaaaagaggatg 812
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 656 ctaccaccacaccagagtggggggaattcattaccaacaccacccaattaaaagaggatg 715


Query: 813 ttatggaaacattgggtatctctgtattcccaggttggagttcattaatggatttattct 872
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 716 ttatggaaacattgggtatctctgtattcccaggttggagttcattaatggatttattct 775


Query: 873 ttgcaactcaatgtcacgatttcccattaccagagggtgtcactcaagatatggtcactc 932
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 776 ttgcaactcaatgtcacgatttcccattaccagagggtgtcactcaagatatggtcactc 835


Query: 933 aagtctatgaagctgcctattggcaataccaatatcaactctctttcccaatgattgctc 992
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 836 aagtctatgaagctgcctattggcaataccaatatcaactctctttcccaatgattgctc 895


Query: 993 gtcttggtatgtctactttcttagaggaggtagtcgataatattagagcttttgttaatg 1052
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 896 gtcttggtatgtctactttcttagaggaggtagtcgataatattagagcttttgttaatg 955


Query: 1053 gtacttcctctgtcaaatatatcgttttctctggtcatgatgattcagttggtccattca 1112
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 956 gtacttcctctgtcaaatatatcgttttctctggtcatgatgattcagttggtccattca 1015


Query: 1113 ctaatttatttggtctcatgaaagaatggccaccttatgcttcacatgttgaacttgaat 1172
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1016 ctaatttatttggtctcatgaaagaatggccaccttatgcttcacatgttgaacttgaat 1075


Query: 1173 tgtggtctgatgaaaaagataattatttcctccaatttaaatttaatggtcaaagttata 1232
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1076 tgtggtctgatgaaaaagataattatttcctccaatttaaatttaatggtcaaagttata 1135


Query: 1233 cattaaatggttgtgaagatgttatgtgcccaattgattcattctttgaaactgcatact 1292
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1136 cattaaatggttgtgaagatgttatgtgcccaattgattcattctttgaaactgcatact 1195


Query: 1293 caattttagttccaaattatgctgatgcatgttcaaattcaacaatgacattttaa 1348
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1196 caattttagttccaaattatgctgatgcatgttcaaattcaacaatgacattttaa 1251

Score = 920 bits (464), Expect(2) = 0.0
Identities = 464/464 (100%)
Strand = Plus / Plus


Query: 110 gtgcattaataacattatttttagtttcactaattttgggtgtttctttatcccaaaaac 169
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14 gtgcattaataacattatttttagtttcactaattttgggtgtttctttatcccaaaaac 73


Query: 170 cattttattgccaagcaccagaaccaacaccaagtttaaatacagatggattaacattaa 229
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 74 cattttattgccaagcaccagaaccaacaccaagtttaaatacagatggattaacattaa 133


Query: 230 agatggtacaaattttaacaagacatggtgatagaacaccattgtatagtacattaaaac 289
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 134 agatggtacaaattttaacaagacatggtgatagaacaccattgtatagtacattaaaac 193


Query: 290 caacaatgaatacatgggattgtaatttaggatggttaatggtatcaagtttaaataatg 349
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 194 caacaatgaatacatgggattgtaatttaggatggttaatggtatcaagtttaaataatg 253


Query: 350 taccaggagcagcaacagatgttgatagattatttagaaaagtttatatgccaaatagag 409
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 254 taccaggagcagcaacagatgttgatagattatttagaaaagtttatatgccaaatagag 313


Query: 410 aatatttcccaggtaattgttcagacggtcaattgacctcacttggattccaacaacatt 469
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 314 aatatttcccaggtaattgttcagacggtcaattgacctcacttggattccaacaacatt 373


Query: 470 tacaattaggtcaaagtttacgtcaactctacgttgataaatatgaattattaccaagtg 529
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 374 tacaattaggtcaaagtttacgtcaactctacgttgataaatatgaattattaccaagtg 433


Query: 530 aattatcagtggatgcagcatcaaccatttgggttcgttcaacc 573
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 434 aattatcagtggatgcagcatcaaccatttgggttcgttcaacc 477

Lambda K H
1.37 0.711 1.31

Matrix: blastn matrix:1 -3
Number of Sequences: 92845959
Number of Hits to DB: 1,535,220,732
Number of extensions: 89097352
Number of successful extensions: 7217088
Number of sequences better than 10.0: 116
Length of query: 1435
Length of database: 95,242,211,685
Length adjustment: 24
Effective length of query: 1411
Effective length of database: 97,308,875,965
Effective search space: 137302823986615
Effective search space used: 137302823986615
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)

protein update 2009. 7.13
Homology vs Protein
Query= Contig-U14954-1 (Contig-U14954-1Q) /CSM_Contig/Contig-U14954-1Q.Seq.d
(1435 letters)

Database: nrp_B
3,236,559 sequences; 1,051,180,864 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value

(Q54PR9) RecName: Full=Counting factor 60; Flags: Precursor; &D... 537 0.0
BC154980_1(BC154980|pid:none) Xenopus laevis hypothetical protei... 68 5e-18
BC125717_1(BC125717|pid:none) Xenopus tropicalis hypothetical pr... 62 8e-18
AM920431_449(AM920431|pid:none) Penicillium chrysogenum Wisconsi... 72 4e-15
(Q0P5F0) RecName: Full=Lysosomal acid phosphatase; Shor... 69 6e-15
(B1H1P9) RecName: Full=Lysosomal acid phosphatase; Shor... 73 9e-15
AM270193_80(AM270193|pid:none) Aspergillus niger contig An09c004... 58 9e-15
AJ720873_1(AJ720873|pid:none) Gallus gallus mRNA for hypothetica... 70 1e-13
BC007460_1(BC007460|pid:none) Homo sapiens acid phosphatase, pro... 69 2e-13
DQ150475_1(DQ150475|pid:none) Macaca mulatta prostatic acid phos... 70 2e-13
CP000439_22(CP000439|pid:none) Francisella tularensis subsp. nov... 65 2e-13
CT030733_1(CT030733|pid:none) Mouse DNA sequence from clone RP23... 66 4e-13
BC016344_1(BC016344|pid:none) Homo sapiens acid phosphatase, pro... 68 4e-13
(Q8CE08) RecName: Full=Prostatic acid phosphatase; EC=3... 66 4e-13
DQ150469_1(DQ150469|pid:none) Pan troglodytes prostatic acid pho... 68 4e-13
CP000915_9(CP000915|pid:none) Francisella tularensis subsp. medi... 65 4e-13
BC073113_1(BC073113|pid:none) Xenopus laevis MGC83618 protein, m... 67 6e-13
DQ826426_1(DQ826426|pid:none) Rattus norvegicus prostatic acid p... 67 6e-13
AF210243_1(AF210243|pid:none) Mus musculus prostatic acid phosph... 65 6e-13
DQ150471_1(DQ150471|pid:none) Gorilla gorilla prostatic acid pho... 68 1e-12
BC081823_1(BC081823|pid:none) Rattus norvegicus acid phosphatase... 66 2e-12
BC090765_1(BC090765|pid:none) Danio rerio zgc:113200, mRNA (cDNA... 61 2e-12
DQ150470_1(DQ150470|pid:none) Pan paniscus prostatic acid phosph... 65 2e-12
AF299349_1(AF299349|pid:none) Legionella pneumophila major acid ... 76 3e-12
(Q5NVF6) RecName: Full=Lysosomal acid phosphatase; Shor... 60 3e-12
BC003160_1(BC003160|pid:none) Homo sapiens acid phosphatase 2, l... 60 3e-12
AY892635_1(AY892635|pid:none) Synthetic construct Homo sapiens c... 65 3e-12
BC008493_1(BC008493|pid:none) Homo sapiens acid phosphatase, pro... 65 3e-12
CR628336_1123(CR628336|pid:none) Legionella pneumophila str. Par... 75 6e-12
CR382131_1106(CR382131|pid:none) Yarrowia lipolytica strain CLIB... 75 6e-12
(A6H730) RecName: Full=Prostatic acid phosphatase; EC=3... 64 7e-12
(Q4R5N9) RecName: Full=Lysosomal acid phosphatase; Shor... 60 9e-12
DQ150472_1(DQ150472|pid:none) Pongo pygmaeus prostatic acid phos... 63 1e-11
BC118766_1(BC118766|pid:none) Xenopus tropicalis lysosomal acid ... 57 4e-11
NRL(1RPA) Prostatic acid phosphatase (EC 3.1.3.2) complexed with... 65 7e-11
AK133756_1(AK133756|pid:none) Mus musculus 8 days embryo whole b... 60 9e-11
(P20646) RecName: Full=Prostatic acid phosphatase; EC=3... 59 1e-10
AK298439_1(AK298439|pid:none) Homo sapiens cDNA FLJ51033 complet... 59 2e-10
X52174_1(X52174|pid:none) Human ACPP mRNA for prostatic acid pho... 69 2e-10
X53605_1(X53605|pid:none) Human mRNA for prostatic acid phosphat... 66 9e-10
AB271538_1(AB271538|pid:none) Drosophila virilis Acph gene for a... 50 4e-09
AF216223_1(AF216223|pid:none) Mus musculus lysophosphatidic acid... 63 3e-08
Y18840_1(Y18840|pid:none) Drosophila madeirensis Acph-1 gene. 44 1e-07
BC099131_1(BC099131|pid:none) Rattus norvegicus acid phosphatase... 60 2e-07
AB030038_1(AB030038|pid:none) Mus musculus mRNA for mPACPL1, com... 60 2e-07
(Q8BP40) RecName: Full=Lysophosphatidic acid phosphatase type 6;... 60 2e-07
DQ974197_1(DQ974197|pid:none) Clonorchis sinensis putative acid ... 42 2e-07
AL691450_20(AL691450|pid:none) Mouse DNA sequence from clone RP2... 49 2e-07
AK300569_1(AK300569|pid:none) Homo sapiens cDNA FLJ53923 complet... 60 2e-07
AJ389444_1(AJ389444|pid:none) Drosophila subobscura Acph-1 gene ... 44 3e-07
AJ564005_1(AJ564005|pid:none) Drosophila subobscura Acph-1 gene ... 44 3e-07
AJ389466_1(AJ389466|pid:none) Drosophila subobscura Acph-1 gene ... 44 3e-07
AJ389455_1(AJ389455|pid:none) Drosophila subobscura Acph-1 gene ... 44 3e-07
AJ564007_1(AJ564007|pid:none) Drosophila subobscura Acph-1 gene ... 44 3e-07
AJ389425_1(AJ389425|pid:none) Drosophila subobscura Acph-1 gene ... 44 3e-07
AJ563977_1(AJ563977|pid:none) Drosophila subobscura Acph-1 gene ... 44 4e-07
AJ389443_1(AJ389443|pid:none) Drosophila subobscura Acph-1 gene ... 44 4e-07
AJ389429_1(AJ389429|pid:none) Drosophila subobscura Acph-1 gene ... 44 4e-07
AJ389450_1(AJ389450|pid:none) Drosophila subobscura Acph-1 gene ... 44 4e-07
AJ389448_1(AJ389448|pid:none) Drosophila subobscura Acph-1 gene ... 44 4e-07
AJ563968_1(AJ563968|pid:none) Drosophila subobscura Acph-1 gene ... 44 4e-07
AJ563982_1(AJ563982|pid:none) Drosophila subobscura Acph-1 gene ... 44 4e-07
AJ389457_1(AJ389457|pid:none) Drosophila subobscura Acph-1 gene ... 44 4e-07
AJ563990_1(AJ563990|pid:none) Drosophila subobscura Acph-1 gene ... 44 4e-07
AJ564003_1(AJ564003|pid:none) Drosophila subobscura Acph-1 gene ... 44 4e-07
AJ563988_1(AJ563988|pid:none) Drosophila subobscura Acph-1 gene ... 44 4e-07
AJ389446_1(AJ389446|pid:none) Drosophila subobscura Acph-1 gene ... 44 4e-07
AJ389433_1(AJ389433|pid:none) Drosophila subobscura Acph-1 gene ... 44 4e-07
AJ389431_1(AJ389431|pid:none) Drosophila subobscura Acph-1 gene ... 44 4e-07
AJ389424_1(AJ389424|pid:none) Drosophila subobscura Acph-1 gene ... 44 4e-07
Y18841_1(Y18841|pid:none) Drosophila guanche Acph-1 gene. 43 5e-07
AJ563969_1(AJ563969|pid:none) Drosophila subobscura Acph-1 gene ... 43 5e-07
AJ563989_1(AJ563989|pid:none) Drosophila subobscura Acph-1 gene ... 43 5e-07
AJ563966_1(AJ563966|pid:none) Drosophila subobscura Acph-1 gene ... 44 6e-07
AJ389434_1(AJ389434|pid:none) Drosophila subobscura Acph-1 gene ... 43 6e-07
AJ389437_1(AJ389437|pid:none) Drosophila subobscura Acph-1 gene ... 43 6e-07
AJ389441_1(AJ389441|pid:none) Drosophila subobscura Acph-1 gene ... 42 8e-07
AJ389463_1(AJ389463|pid:none) Drosophila subobscura Acph-1 gene ... 44 1e-06
(Q3KQG9) RecName: Full=Testicular acid phosphatase homolog; ... 57 1e-06
(Q54P71) RecName: Full=Probable acid phosphatase DDB_G0284755; ... 57 1e-06
AE017353_116(AE017353|pid:none) Cryptococcus neoformans var. neo... 57 2e-06
AJ389458_1(AJ389458|pid:none) Drosophila subobscura Acph-1 gene ... 43 2e-06
AJ389449_1(AJ389449|pid:none) Drosophila subobscura Acph-1 gene ... 44 2e-06
BC017877_1(BC017877|pid:none) Homo sapiens acid phosphatase, pro... 45 2e-06
AK296292_1(AK296292|pid:none) Homo sapiens cDNA FLJ50551 complet... 56 3e-06
BC094140_1(BC094140|pid:none) Xenopus laevis testicular acid pho... 56 3e-06
BC036701_1(BC036701|pid:none) Homo sapiens acid phosphatase-like... 56 3e-06
AJ389475_1(AJ389475|pid:none) Drosophila subobscura Acph-1 gene ... 40 3e-06
(Q9BZG2) RecName: Full=Testicular acid phosphatase; EC=... 48 5e-06
(Q66H78) RecName: Full=Acid phosphatase-like protein 2; ... 55 8e-06
CP001331_473(CP001331|pid:none) Micromonas sp. RCC299 chromosome... 54 1e-05
AK036973_1(AK036973|pid:none) Mus musculus adult female vagina c... 54 2e-05
(Q8BHA9) RecName: Full=Acid phosphatase-like protein 2; ... 53 2e-05
(Q5R8C0) RecName: Full=Lysophosphatidic acid phosphatase type 6;... 53 3e-05
CT005272_267(CT005272|pid:none) Leishmania major strain Friedlin... 51 1e-04
AB170604_1(AB170604|pid:none) Macaca fascicularis brain cDNA clo... 35 2e-04
AM502254_94(AM502254|pid:none) Leishmania infantum chromosome 36. 50 3e-04
AF293415_1(AF293415|pid:none) Giardia intestinalis acid phosphat... 50 3e-04
(Q0IHQ9) RecName: Full=Acid phosphatase-like protein 2; ... 50 3e-04
AP007151_913(AP007151|pid:none) Aspergillus oryzae RIB40 genomic... 35 4e-04
CR954214_37(CR954214|pid:none) Ostreococcus tauri strain OTTH059... 49 6e-04
D88844(D88844)protein ZK792.1 [imported] - Caenorhabditis elegans 48 8e-04
(Q6DH46) RecName: Full=Acid phosphatase-like protein 2; ... 48 8e-04
AM494972_280(AM494972|pid:none) Leishmania braziliensis chromoso... 48 0.001
AF026211_2(AF026211|pid:none) Caenorhabditis elegans cosmid T13B... 39 0.001
Z68303_12(Z68303|pid:none) Caenorhabditis elegans Cosmid ZK809, ... 47 0.001
CR382131_1107(CR382131|pid:none) Yarrowia lipolytica strain CLIB... 47 0.001
AY785289_1(AY785289|pid:none) Bos taurus lysophosphatidic acid p... 45 0.005
AE014296_3346(AE014296|pid:none) Drosophila melanogaster chromos... 45 0.009
AB209248_1(AB209248|pid:none) Homo sapiens mRNA for acid phospha... 45 0.009
T15933(T15933) hypothetical protein EGAP2.3 - Caenorhabditis ele... 42 0.043
T16883(T16883)hypothetical protein T16D1.2 - Caenorhabditis eleg... 42 0.056
T24223(T24223)hypothetical protein R13H4.3 - Caenorhabditis eleg... 42 0.073
AK299382_1(AK299382|pid:none) Homo sapiens cDNA FLJ51058 complet... 36 0.099
AX884357_1(AX884357|pid:none) Sequence 220 from Patent EP1033401. 31 0.20
FN392322_20(FN392322|pid:none) Pichia pastoris GS115 chromosome ... 40 0.21
D88504(D88504)protein B0361.7 [imported] - Caenorhabditis elegans 39 0.47
(Q10944) RecName: Full=Putative acid phosphatase B0361.7; ... 39 0.47
AM494965_286(AM494965|pid:none) Leishmania braziliensis chromoso... 39 0.47
CP000356_743(CP000356|pid:none) Sphingopyxis alaskensis RB2256, ... 39 0.47
EU365869_1(EU365869|pid:none) Pteromalus puparum venom acid phos... 39 0.47
AY134440_1(AY134440|pid:none) Meloidogyne incognita putative eso... 39 0.61
EF710645_41(EF710645|pid:none) Glyptapanteles flavicoxis clone B... 38 0.80
AY075470_1(AY075470|pid:none) Drosophila melanogaster RE31002 fu... 37 1.4
Z68314_7(Z68314|pid:none) Caenorhabditis elegans Cosmid F07H5, c... 37 1.8
CP000884_1716(CP000884|pid:none) Delftia acidovorans SPH-1, comp... 37 2.3
CP000410_1789(CP000410|pid:none) Streptococcus pneumoniae D39, c... 37 2.3
L08611_2(L08611|pid:none) Streptococcus pneumoniae maltose/malto... 37 2.3
(P0A4N1) RecName: Full=Maltodextrin transport system permease pr... 37 2.3
U58760_4(U58760|pid:none) Caenorhabditis elegans cosmid C27A2, c... 37 2.3
EF710645_40(EF710645|pid:none) Glyptapanteles flavicoxis clone B... 36 3.1
AM502241_142(AM502241|pid:none) Leishmania infantum chromosome 23. 36 3.1
CU638743_243(CU638743|pid:none) Podospora anserina genomic DNA c... 35 6.8
AL590447_18(AL590447|pid:none) chromosome VII of strain GB-M1 of... 35 6.8
(P24031) RecName: Full=Constitutive acid phosphatase; E... 35 8.9
X01080_2(X01080|pid:none) Yeast genes PH05 and PH03 for repressi... 35 8.9
T20556(T20556)hypothetical protein F07H5.9 - Caenorhabditis eleg... 35 8.9

>(Q54PR9) RecName: Full=Counting factor 60; Flags: Precursor;
&DQ143912_1(DQ143912|pid:none)
Length = 416

Score = 537 bits (1384), Expect(2) = 0.0
Identities = 257/257 (100%), Positives = 257/257 (100%)
Frame = +2

Query: 575 DVPRTIQSVQGHLTALFPPTTVTSGSGIPIININTMDNYYENMTPNPTLCPELAVLIANT 754
DVPRTIQSVQGHLTALFPPTTVTSGSGIPIININTMDNYYENMTPNPTLCPELAVLIANT
Sbjct: 160 DVPRTIQSVQGHLTALFPPTTVTSGSGIPIININTMDNYYENMTPNPTLCPELAVLIANT 219

Query: 755 TTTPEWGEFITNTTQLKEDVMETLGISVFPGWSSLMDLFFATQCHDFPLPEGVTQDMVTQ 934
TTTPEWGEFITNTTQLKEDVMETLGISVFPGWSSLMDLFFATQCHDFPLPEGVTQDMVTQ
Sbjct: 220 TTTPEWGEFITNTTQLKEDVMETLGISVFPGWSSLMDLFFATQCHDFPLPEGVTQDMVTQ 279

Query: 935 VYEAAYWQYQYQLSFPMIARLGMSTFLEEVVDNIRAFVNGTSSVKYIVFSGHDDSVGPFT 1114
VYEAAYWQYQYQLSFPMIARLGMSTFLEEVVDNIRAFVNGTSSVKYIVFSGHDDSVGPFT
Sbjct: 280 VYEAAYWQYQYQLSFPMIARLGMSTFLEEVVDNIRAFVNGTSSVKYIVFSGHDDSVGPFT 339

Query: 1115 NLFGLMKEWPPYASHVELELWSDEKDNYFLQFKFNGQSYTLNGCEDVMCPIDSFFETAYS 1294
NLFGLMKEWPPYASHVELELWSDEKDNYFLQFKFNGQSYTLNGCEDVMCPIDSFFETAYS
Sbjct: 340 NLFGLMKEWPPYASHVELELWSDEKDNYFLQFKFNGQSYTLNGCEDVMCPIDSFFETAYS 399

Query: 1295 ILVPNYADACSNSTMTF 1345
ILVPNYADACSNSTMTF
Sbjct: 400 ILVPNYADACSNSTMTF 416

Score = 324 bits (831), Expect(2) = 0.0
Identities = 159/159 (100%), Positives = 159/159 (100%)
Frame = +1

Query: 97 MIKKSALITLFLVSLILGVSLSQKPFYCQAPEPTPSLNTDGLTLKMVQILTRHGDRTPLY 276
MIKKSALITLFLVSLILGVSLSQKPFYCQAPEPTPSLNTDGLTLKMVQILTRHGDRTPLY
Sbjct: 1 MIKKSALITLFLVSLILGVSLSQKPFYCQAPEPTPSLNTDGLTLKMVQILTRHGDRTPLY 60

Query: 277 STLKPTMNTWDCNLGWLMVSSLNNVPGAATDVDRLFRKVYMPNREYFPGNCSDGQLTSLG 456
STLKPTMNTWDCNLGWLMVSSLNNVPGAATDVDRLFRKVYMPNREYFPGNCSDGQLTSLG
Sbjct: 61 STLKPTMNTWDCNLGWLMVSSLNNVPGAATDVDRLFRKVYMPNREYFPGNCSDGQLTSLG 120

Query: 457 FQQHLQLGQSLRQLYVDKYELLPSELSVDAASTIWVRST 573
FQQHLQLGQSLRQLYVDKYELLPSELSVDAASTIWVRST
Sbjct: 121 FQQHLQLGQSLRQLYVDKYELLPSELSVDAASTIWVRST 159

Lambda K H
0.318 0.134 0.401

Gapped
Lambda K H
0.267 0.0410 0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3236559
Number of Hits to DB: 2,406,998,322
Number of extensions: 52098352
Number of successful extensions: 130889
Number of sequences better than 10.0: 137
Number of HSP's gapped: 130726
Number of HSP's successfully gapped: 243
Length of query: 478
Length of database: 1,051,180,864
Length adjustment: 132
Effective length of query: 346
Effective length of database: 623,955,076
Effective search space: 215888456296
Effective search space used: 215888456296
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)

PSORT

psg: 0.83 gvh: 0.55 alm: 0.41 top: 0.53 tms: 0.00 mit: 0.29 mip: 0.07
nuc: 0.00 erl: 0.00 erm: 0.00 pox: 0.00 px2: 0.00 vac: 0.00 rnp: 0.00
act: 0.00 caa: 0.00 yqr: 0.00 tyr: 0.00 leu: 0.00 gpi: 0.00 myr: 0.00
dna: 0.00 rib: 0.00 bac: 0.00 m1a: 0.00 m1b: 0.00 m2 : 0.00 mNt: 0.00
m3a: 0.00 m3b: 0.00 m_ : 1.00

44.0 %: nuclear
32.0 %: cytoplasmic
16.0 %: mitochondrial
8.0 %: cytoskeletal

>> prediction for Contig-U14954-1 is nuc

VS (DIR, S) 0
VH (FL, L) 1
VF (FL, S) 19
AH (FL, L) 0
AF (FL, S) 11
SL (DIR, L) 4
SS (DIR, S) 0
SH (FL, L) 0
SF (FL, S) 14
CH (FL, L) 1
CF (FL, S) 4
FCL (DIR, L) 0
FC (DIR, S) 0
FC-IC (SUB) 0