Contig-U14926-1
Contig ID Contig-U14926-1
Contig update 2004. 6.11
Contig sequence
>Contig-U14926-1 (Contig-U14926-1Q) /CSM_Contig/Contig-U14926-1Q.Seq.d
ACTGTTGGCCTACTGGTATATTACAACTCAAACATCCACCATCACTTTTT
ATAGTATTACTACTTTAAAATTTGACCTATTTTTTATTTATTAAATTAAA
TAATTCATTGTAAATTCGATAATAAGGGGATTTAAAAAAGGAATCATTTT
TTTTCACTCTTTATTTTGTACACTATAAAAAAAAAAAAAAAAAAAAAAAA
ACTATTATTTATCCATATTTAACACCCACACCATAATTTATTGTATTAAT
ATATATATAAGCTAAAAAATGGATTCAAATAAAGTTATCGTTATGGATAA
TGGTACTGGTTTTGTAAAATGTGGTTTTGCAGGTGCAAATTTCCCAACAG
CCATTTTTCCATCAATGGTTGGTAGACCAATTTTACGTTCAGAAGAAAAG
GTAGAAAATGTAGAGATTAAAGATATTATGGTTGGTGATGAAGCAGCCAA
ATTAAGATCAATGTTACAAATCACCTATCCATTGGAAAATGGTATCATTC
GTAATTGGGATGATATTACACACGTATGGGACTATGCACTTAAAGAGAAA
TTAAAAGTTAGTGATCCAACTGAATGCAAGATCCTCTTGACCGAACCACC
AATGAATCCAGTTGCAAATCGTCAAAAAATGATTGAATGTATGTTTGAAA
AGTATGGATTCCAAGCAGTTTACGTAGCAATTCAAGCCGTACTCACACTC
TATGCTCAAGGTCTCTTGACTGGTGTTGTCGTAGATTCAGGTGATGGTGT
CACCCATATCATTCCAGTCTATGAGGGTTACTCAATCCCACATTTGACTC
GTCGTCTCGATGTTGCCGGTCGTGATGTAACTCGTTACCTCATCAAATTA
TTATTACTCCGTGGTTACGCTTTCAATCGTACCGCCGATTTCGAAACCAT
CCGTCAAATCAAAGAGAAACTCTGTTATGTCGCATACGATGTTCAACAAG
AGATGAAATTGGCCTCAGAGACCACTGTTCTCGTCGAAAACTACACCCTC
CCAGACGGTCGTGTAATCAAAGTTGGCCAAGAGAGATTCCAAGCCTCTGA
AGCCCTCTTCAATCCATCTTTGGTCGATGTCGAAGGTGGTGGTGTCCATG
AACAATTGTTTGATTGTATCACCAAGGCAGACCGTGATCTTCAACAAGGT
TTCTATCAACATATCGTCCTTTCTGGTGGTTCCTCTATGTATCCAGGTTT
ACCATCTCGTCTCGAAAAGGAAATTAGATCTCTCTATTTGGAACGTGTAT
TAAAAGGAAACAAAGAAGGTCTCGCTAAATTCAAATGCAGAATCGAAGAT
CCACCAAGAAGAAAGCACATGGTTTTCCTCGGTGGTGCTGTCTTGGCTGA
TCTTACCAAGGATCGTGATGATTTCTGGATTACCAAAGCTGAATACATGG
AAAAAGGTTTTGGTGCTTTAGATAAATTAACTAAATTATCTGTTTAAATG
AAATAAATATAATAAAAAAAATAAAAAAAAAAAAAATTTAAAAAAAAAAA
ATAATTTCAACATTAAACAAATGAAAATATTAAATAAAAATAGAAATAAA
AAAAAATAAAAAAAAAAAAAAA

Gap no gap
Contig length 1572
Chromosome number (1..6, M) 2
Chromosome length 8467578
Start point 1627551
End point 1625996
Strand (PLUS/MINUS) MINUS
Number of clones 56
Number of EST 90
Link to clone list U14926
List of clone(s)

est1=AFA437F,1,167
est2=CHC339F,1,187
est3=VFM535F,1,190
est4=CHE249F,6,187
est5=SFH755F,8,188
est6=AFC754F,16,185
est7=AFE507F,16,185
est8=AFG377F,16,185
est9=AFJ122F,16,185
est10=AFJ635F,16,185
est11=AFJ842F,16,185
est12=AFN542F,16,185
est13=AFN715F,16,185
est14=AFK288F,18,185
est15=CFD425F,18,187
est16=CHC339Z,18,154
est17=VFC657F,18,190
est18=VFD466F,18,190
est19=VFD466Z,18,169
est20=VFM594F,18,190
est21=VFN742F,18,190
est22=AFD277F,20,185
est23=CFF806F,20,187
est24=SFA638F,20,186
est25=SFD244F,20,186
est26=SHK686F,20,186
est27=VFK350F,20,190
est28=VFK350Z,20,157
est29=AFA574F,21,185
est30=AFF529F,21,185
est31=AFI472Z,21,166
est32=AFJ309F,21,185
est33=AFJ315F,21,185
est34=AFK288Z,21,132
est35=VFE240F,22,190
est36=VFE240Z,22,160
est37=SFE206F,23,186
est38=SFE730F,25,186
est39=VFD448F,25,190
est40=AFH666F,27,185
est41=VFD145F,30,190
est42=VFD145Z,30,157
est43=CFH233F,39,187
est44=VFB262F,39,190
est45=CFH645F,41,187
est46=FC-AH01E,41,1506
est47=SSL386F,43,325
est48=AFC587F,53,185
est49=VFI201F,238,845
est50=AFF459F,266,495
est51=AFF191F,268,690
est52=AFC754H,609,1572
est53=VFD448Z,679,1211
est54=SFD244Z,689,1208
est55=SLB194Z,699,1474
est56=CHE249Z,721,1203
est57=VFM535Z,728,1202
est58=SHK686Z,734,1240
est59=CFH233Z,737,1216
est60=VFC657Z,744,1215
est61=CFF806Z,816,1214
est62=VFN742Z,816,1213
est63=CFH645Z,817,1184
est64=SFE730Z,820,1242
est65=CFD425Z,864,1202
est66=FC-BH03Z,897,1510
est67=VFI201Z,922,1410
est68=SLB443Z,933,1549
est69=FC-AN01Z,959,1572
est70=SFE206Z,985,1232
est71=SFG233Z,1013,1327
est72=SLK167F,1031,1158
est73=VFG605Z,1081,1327
est74=AFJ315Z,1177,1572
est75=AFJ122Z,1184,1572
est76=AFC587Z,1220,1572
est77=AFD277Z,1228,1572
est78=AFC754Z,1229,1572
est79=AFE507Z,1230,1572
est80=AFJ635Z,1238,1572
est81=AFJ309Z,1239,1572
est82=SSL386Z,1262,1474
est83=AFK748Z,1290,1572
est84=SLH347F,1315,1491
est85=SLJ227E,1315,1491
est86=SLK771E,1315,1491
est87=AFG377Z,1321,1572
est88=SLK167Z,1401,1524
est89=AFJ842Z,1483,1572
est90=AFF191Z,1670,1572
Translated Amino Acid sequence
llaywyittqtstitfysittlkfdlffiy*ik*fivnsiirgfkkgiiffhslfctl*k
kkkkkknyylsifnthtiiyciniyis*KMDSNKVIVMDNGTGFVKCGFAGANFPTAIFP
SMVGRPILRSEEKVENVEIKDIMVGDEAAKLRSMLQITYPLENGIIRNWDDITHVWDYAL
KEKLKVSDPTECKILLTEPPMNPVANRQKMIECMFEKYGFQAVYVAIQAVLTLYAQGLLT
GVVVDSGDGVTHIIPVYEGYSIPHLTRRLDVAGRDVTRYLIKLLLLRGYAFNRTADFETI
RQIKEKLCYVAYDVQQEMKLASETTVLVENYTLPDGRVIKVGQERFQASEALFNPSLVDV
EGGGVHEQLFDCITKADRDLQQGFYQHIVLSGGSSMYPGLPSRLEKEIRSLYLERVLKGN
KEGLAKFKCRIEDPPRRKHMVFLGGAVLADLTKDRDDFWITKAEYMEKGFGALDKLTKLS
V*mk*i**kk*kkkkfkkkk*fqh*tnenik*k*k*kkikkkk


Translated Amino Acid sequence (All Frames)
Frame A:
tvgllvyynsnihhhfl*yyyfki*pifylln*iihckfdnkgi*krnhffslfilytik
kkkkkkkllfihi*hphhnlly*yiyklkngfk*syryg*wywfckmwfcrckfpnshfs
ingw*tnftfrrkgrkcrd*ryygw**ssqikinvtnhlsigkwyhs*lg*yytrmglct
*reiks**sn*mqdpldrttnessckssknd*myv*kvwipsslrsnssrthtlcsrsld
wccrrfr*wchpyhssl*gllnptfdsssrccrs*cnslphqiiitpwlrfqsyrrfrnh
psnqretllcrircstrdeiglrdhcsrrklhpprrscnqswpreipsl*splqsifgrc
rrwwcp*tiv*lyhqgrp*sstrflstyrpfwwflyvsrftissrkgn*islfgtcikrk
qrrsr*iqmqnrrstkkkahgfprwcclg*syqgs**fldyqs*ihgkrfwcfr*in*ii
clneiniikkikkkki*kkkiistlnk*ky*ikieikknkkkkk


Frame B:
llaywyittqtstitfysittlkfdlffiy*ik*fivnsiirgfkkgiiffhslfctl*k
kkkkkknyylsifnthtiiyciniyis*KMDSNKVIVMDNGTGFVKCGFAGANFPTAIFP
SMVGRPILRSEEKVENVEIKDIMVGDEAAKLRSMLQITYPLENGIIRNWDDITHVWDYAL
KEKLKVSDPTECKILLTEPPMNPVANRQKMIECMFEKYGFQAVYVAIQAVLTLYAQGLLT
GVVVDSGDGVTHIIPVYEGYSIPHLTRRLDVAGRDVTRYLIKLLLLRGYAFNRTADFETI
RQIKEKLCYVAYDVQQEMKLASETTVLVENYTLPDGRVIKVGQERFQASEALFNPSLVDV
EGGGVHEQLFDCITKADRDLQQGFYQHIVLSGGSSMYPGLPSRLEKEIRSLYLERVLKGN
KEGLAKFKCRIEDPPRRKHMVFLGGAVLADLTKDRDDFWITKAEYMEKGFGALDKLTKLS
V*mk*i**kk*kkkkfkkkk*fqh*tnenik*k*k*kkikkkk


Frame C:
cwptgilqlkhppslfivlll*nltyflfiklnnsl*ir**gdlkkesffftlyfvhykk
kkkkkktiiypyltptp*fivliyi*akkwiqiklslwimvlvl*nvvlqvqisqqpffh
qwlvdqfyvqkkr*km*rlkilwlvmkqpn*dqcykspihwkmvsfvigmilhtygtmhl
krn*klviqlnarss*pnhq*iqlqivkk*lnvclksmdskqft*qfkpyshsmlkvs*l
vls*iqvmvspisfqsmrvtqshi*lvvsmlpvvm*lvtssnyyysvvtlsivppiskps
vkskrnsvmshtmfnkr*nwpqrplfsskttpsqtvv*sklakrdskplkpssihlwsms
kvvvsmnnclivsprqtvifnkvsinissflvvplciqvyhlvskrkldlsiwnvy*ket
kkvslnsnaeskihqeestwfssvvlswlilprivmisglpklntwkkvlvl*in*lnyl
fk*nkynkknkkkknlkkknnfnikqmkilnknrnkkk*kkkk


own update 2004. 6.23
Homology vs CSM-cDNA
Query= Contig-U14926-1 (Contig-U14926-1Q)
/CSM_Contig/Contig-U14926-1Q.Seq.d
(1572 letters)

Database: CSM
8402 sequences; 8,075,542 total letters


Score E
Sequences producing significant alignments: (bits) Value

Contig-U14926-1 (Contig-U14926-1Q) /CSM_Contig/Conti... 2502 0.0
Contig-U15008-1 (Contig-U15008-1Q) /CSM_Contig/Conti... 44 7e-04
Contig-U12703-1 (Contig-U12703-1Q) /CSM_Contig/Conti... 44 7e-04
Contig-U12149-1 (Contig-U12149-1Q) /CSM_Contig/Conti... 44 7e-04
Contig-U16082-1 (Contig-U16082-1Q) /CSM_Contig/Conti... 42 0.003
Contig-U15188-1 (Contig-U15188-1Q) /CSM_Contig/Conti... 40 0.010
Contig-U14571-1 (Contig-U14571-1Q) /CSM_Contig/Conti... 40 0.010
Contig-U11262-1 (Contig-U11262-1Q) /CSM_Contig/Conti... 40 0.010
Contig-U11403-1 (Contig-U11403-1Q) /CSM_Contig/Conti... 38 0.040
Contig-U13293-1 (Contig-U13293-1Q) /CSM_Contig/Conti... 34 0.63

>Contig-U14926-1 (Contig-U14926-1Q) /CSM_Contig/Contig-U14926-1Q.Seq.d
Length = 1572

Score = 2502 bits (1262), Expect = 0.0
Identities = 1262/1262 (100%)
Strand = Plus / Plus


Query: 202 ctattatttatccatatttaacacccacaccataatttattgtattaatatatatataag 261
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 202 ctattatttatccatatttaacacccacaccataatttattgtattaatatatatataag 261


Query: 262 ctaaaaaatggattcaaataaagttatcgttatggataatggtactggttttgtaaaatg 321
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 ctaaaaaatggattcaaataaagttatcgttatggataatggtactggttttgtaaaatg 321


Query: 322 tggttttgcaggtgcaaatttcccaacagccatttttccatcaatggttggtagaccaat 381
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 tggttttgcaggtgcaaatttcccaacagccatttttccatcaatggttggtagaccaat 381


Query: 382 tttacgttcagaagaaaaggtagaaaatgtagagattaaagatattatggttggtgatga 441
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 tttacgttcagaagaaaaggtagaaaatgtagagattaaagatattatggttggtgatga 441


Query: 442 agcagccaaattaagatcaatgttacaaatcacctatccattggaaaatggtatcattcg 501
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 agcagccaaattaagatcaatgttacaaatcacctatccattggaaaatggtatcattcg 501


Query: 502 taattgggatgatattacacacgtatgggactatgcacttaaagagaaattaaaagttag 561
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 502 taattgggatgatattacacacgtatgggactatgcacttaaagagaaattaaaagttag 561


Query: 562 tgatccaactgaatgcaagatcctcttgaccgaaccaccaatgaatccagttgcaaatcg 621
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 562 tgatccaactgaatgcaagatcctcttgaccgaaccaccaatgaatccagttgcaaatcg 621


Query: 622 tcaaaaaatgattgaatgtatgtttgaaaagtatggattccaagcagtttacgtagcaat 681
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 622 tcaaaaaatgattgaatgtatgtttgaaaagtatggattccaagcagtttacgtagcaat 681


Query: 682 tcaagccgtactcacactctatgctcaaggtctcttgactggtgttgtcgtagattcagg 741
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 682 tcaagccgtactcacactctatgctcaaggtctcttgactggtgttgtcgtagattcagg 741


Query: 742 tgatggtgtcacccatatcattccagtctatgagggttactcaatcccacatttgactcg 801
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 742 tgatggtgtcacccatatcattccagtctatgagggttactcaatcccacatttgactcg 801


Query: 802 tcgtctcgatgttgccggtcgtgatgtaactcgttacctcatcaaattattattactccg 861
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 802 tcgtctcgatgttgccggtcgtgatgtaactcgttacctcatcaaattattattactccg 861


Query: 862 tggttacgctttcaatcgtaccgccgatttcgaaaccatccgtcaaatcaaagagaaact 921
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 862 tggttacgctttcaatcgtaccgccgatttcgaaaccatccgtcaaatcaaagagaaact 921


Query: 922 ctgttatgtcgcatacgatgttcaacaagagatgaaattggcctcagagaccactgttct 981
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 922 ctgttatgtcgcatacgatgttcaacaagagatgaaattggcctcagagaccactgttct 981


Query: 982 cgtcgaaaactacaccctcccagacggtcgtgtaatcaaagttggccaagagagattcca 1041
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 982 cgtcgaaaactacaccctcccagacggtcgtgtaatcaaagttggccaagagagattcca 1041


Query: 1042 agcctctgaagccctcttcaatccatctttggtcgatgtcgaaggtggtggtgtccatga 1101
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1042 agcctctgaagccctcttcaatccatctttggtcgatgtcgaaggtggtggtgtccatga 1101


Query: 1102 acaattgtttgattgtatcaccaaggcagaccgtgatcttcaacaaggtttctatcaaca 1161
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1102 acaattgtttgattgtatcaccaaggcagaccgtgatcttcaacaaggtttctatcaaca 1161


Query: 1162 tatcgtcctttctggtggttcctctatgtatccaggtttaccatctcgtctcgaaaagga 1221
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1162 tatcgtcctttctggtggttcctctatgtatccaggtttaccatctcgtctcgaaaagga 1221


Query: 1222 aattagatctctctatttggaacgtgtattaaaaggaaacaaagaaggtctcgctaaatt 1281
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1222 aattagatctctctatttggaacgtgtattaaaaggaaacaaagaaggtctcgctaaatt 1281


Query: 1282 caaatgcagaatcgaagatccaccaagaagaaagcacatggttttcctcggtggtgctgt 1341
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1282 caaatgcagaatcgaagatccaccaagaagaaagcacatggttttcctcggtggtgctgt 1341


Query: 1342 cttggctgatcttaccaaggatcgtgatgatttctggattaccaaagctgaatacatgga 1401
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1342 cttggctgatcttaccaaggatcgtgatgatttctggattaccaaagctgaatacatgga 1401


Query: 1402 aaaaggttttggtgctttagataaattaactaaattatctgtttaaatgaaataaatata 1461
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1402 aaaaggttttggtgctttagataaattaactaaattatctgtttaaatgaaataaatata 1461


Query: 1462 at 1463
||
Sbjct: 1462 at 1463


Score = 301 bits (152), Expect = 2e-81
Identities = 168/176 (95%)
Strand = Plus / Plus


Query: 1 actgttggcctactggtatattacaactcaaacatccaccatcactttttatagtattac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 actgttggcctactggtatattacaactcaaacatccaccatcactttttatagtattac 60


Query: 61 tactttaaaatttgacctattttttatttattaaattaaataattcattgtaaattcgat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tactttaaaatttgacctattttttatttattaaattaaataattcattgtaaattcgat 120


Query: 121 aataaggggatttaaaaaaggaatcannnnnnnncactctttattttgtacactat 176
|||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 121 aataaggggatttaaaaaaggaatcattttttttcactctttattttgtacactat 176


>Contig-U15008-1 (Contig-U15008-1Q) /CSM_Contig/Contig-U15008-1Q.Seq.d
Length = 2201

Score = 44.1 bits (22), Expect = 7e-04
Identities = 22/22 (100%)
Strand = Plus / Plus


Query: 1 actgttggcctactggtatatt 22
||||||||||||||||||||||
Sbjct: 1 actgttggcctactggtatatt 22


Score = 32.2 bits (16), Expect = 2.5
Identities = 19/20 (95%)
Strand = Plus / Minus


Query: 78 tattttttatttattaaatt 97
||||||||||||||| ||||
Sbjct: 2029 tattttttatttatttaatt 2010


>Contig-U12703-1 (Contig-U12703-1Q) /CSM_Contig/Contig-U12703-1Q.Seq.d
Length = 139

Score = 44.1 bits (22), Expect = 7e-04
Identities = 22/22 (100%)
Strand = Plus / Plus


Query: 1 actgttggcctactggtatatt 22
||||||||||||||||||||||
Sbjct: 1 actgttggcctactggtatatt 22


Database: CSM
Posted date: Jun 21, 2004 1:35 PM
Number of letters in database: 8,075,542
Number of sequences in database: 8402

Lambda K H
1.37 0.711 1.31

Gapped
Lambda K H
1.37 0.711 1.31


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 29,221
Number of Sequences: 8402
Number of extensions: 29221
Number of successful extensions: 4019
Number of sequences better than 10.0: 976
length of query: 1572
length of database: 8,075,542
effective HSP length: 16
effective length of query: 1556
effective length of database: 7,941,110
effective search space: 12356367160
effective search space used: 12356367160
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 15 (30.2 bits)
dna update 2009. 1. 5
Homology vs DNA
Query= Contig-U14926-1 (Contig-U14926-1Q) /CSM_Contig/Contig-U14926-1Q.Seq.d
(1572 letters)

Database: ddbj_A
92,845,959 sequences; 95,242,211,685 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value N

(AF095929) Dictyostelium discoideum actin related protein 2 ... 2502 0.0 2
(AC116963) Dictyostelium discoideum chromosome 2 map 4657875... 2286 0.0 1
(AU033584) Dictyostelium discoideum slug cDNA, clone SLB194. 1516 0.0 1
(C23762) Dictyostelium discoideum gamete cDNA, clone FC-AH01. 1312 0.0 2
(BJ413791) Dictyostelium discoideum cDNA clone:ddv17a02, 5' ... 1203 0.0 1
(AU284680) Dictyostelium discoideum gamete cDNA clone:FC-BH0... 1092 0.0 1
(BJ430501) Dictyostelium discoideum cDNA clone:ddv7p12, 3' e... 1051 0.0 1
(BJ344408) Dictyostelium discoideum cDNA clone:dda19n03, 3' ... 1047 0.0 1
(AU033791) Dictyostelium discoideum slug cDNA, clone SLB443. 1041 0.0 1
(BJ341497) Dictyostelium discoideum cDNA clone:dda6m21, 3' e... 1031 0.0 1
(BJ399751) Dictyostelium discoideum cDNA clone:dds7g12, 3' e... 1027 0.0 1
(C23761) Dictyostelium discoideum gamete cDNA, clone FC-AH01. 912 0.0 2
(BJ344397) Dictyostelium discoideum cDNA clone:dda19k05, 3' ... 1017 0.0 1
(AU284338) Dictyostelium discoideum gamete cDNA clone:FC-AN0... 993 0.0 1
(BJ408460) Dictyostelium discoideum cDNA clone:dds45k22, 3' ... 955 0.0 2
(BJ346945) Dictyostelium discoideum cDNA clone:dda25k15, 3' ... 963 0.0 1
(BJ341712) Dictyostelium discoideum cDNA clone:dda7i20, 3' e... 952 0.0 1
(BJ344359) Dictyostelium discoideum cDNA clone:dda19b03, 3' ... 948 0.0 1
(BJ372986) Dictyostelium discoideum cDNA clone:ddc15a10, 3' ... 944 0.0 1
(BJ341436) Dictyostelium discoideum cDNA clone:dda6l13, 3' e... 940 0.0 1
(BJ431901) Dictyostelium discoideum cDNA clone:ddv17a02, 3' ... 938 0.0 1
(BJ339724) Dictyostelium discoideum cDNA clone:dda10m01, 3' ... 936 0.0 1
(BJ430216) Dictyostelium discoideum cDNA clone:ddv6a16, 3' e... 930 0.0 1
(BJ344725) Dictyostelium discoideum cDNA clone:dda20e10, 3' ... 918 0.0 1
(BJ376898) Dictyostelium discoideum cDNA clone:ddc30a14, 3' ... 904 0.0 1
(BJ435165) Dictyostelium discoideum cDNA clone:ddv26e09, 3' ... 868 0.0 1
(BJ323691) Dictyostelium discoideum cDNA clone:dda11e23, 5' ... 839 0.0 1
(BJ342411) Dictyostelium discoideum cDNA clone:dda13j19, 3' ... 801 0.0 1
(BJ372326) Dictyostelium discoideum cDNA clone:ddc12l02, 3' ... 789 0.0 1
(BJ435770) Dictyostelium discoideum cDNA clone:ddv28d11, 3' ... 787 0.0 1
(BJ343244) Dictyostelium discoideum cDNA clone:dda22p11, 3' ... 777 0.0 1
(BJ397959) Dictyostelium discoideum cDNA clone:dds10l07, 3' ... 741 0.0 2
(BJ374321) Dictyostelium discoideum cDNA clone:ddc7b08, 3' e... 672 0.0 1
(BJ400425) Dictyostelium discoideum cDNA clone:dds13a10, 3' ... 575 e-159 1
(BJ374806) Dictyostelium discoideum cDNA clone:ddc16i12, 3' ... 559 e-154 1
(BJ323648) Dictyostelium discoideum cDNA clone:dda11f16, 5' ... 442 e-119 1
(BJ431416) Dictyostelium discoideum cDNA clone:ddv14i02, 3' ... 434 e-117 1
(AU038715) Dictyostelium discoideum slug cDNA, clone SSL386. 404 e-108 1
(BJ347055) Dictyostelium discoideum cDNA clone:dda25p24, 3' ... 391 e-104 1
(BJ400182) Dictyostelium discoideum cDNA clone:dds9k02, 3' e... 349 2e-91 1
(BJ344721) Dictyostelium discoideum cDNA clone:dda20d12, 3' ... 333 1e-86 1
(BJ340138) Dictyostelium discoideum cDNA clone:dda11e23, 3' ... 311 4e-80 1
(AU062046) Dictyostelium discoideum slug cDNA, clone SLH347. 299 2e-76 1
(AU054131) Dictyostelium discoideum slug cDNA, clone SLK771. 299 2e-76 1
(AU053609) Dictyostelium discoideum slug cDNA, clone SLJ227. 299 2e-76 1
(AU074620) Dictyostelium discoideum slug cDNA, clone SSL386. 165 4e-72 2
(AU060500) Dictyostelium discoideum slug cDNA, clone SLK167. 248 5e-61 1
(BJ416392) Dictyostelium discoideum cDNA clone:ddv26e09, 5' ... 141 3e-48 2
(BJ363396) Dictyostelium discoideum cDNA clone:ddc26n09, 5' ... 135 2e-40 2
(BJ416586) Dictyostelium discoideum cDNA clone:ddv26k23, 5' ... 141 3e-38 2
(BJ412251) Dictyostelium discoideum cDNA clone:ddv7d18, 5' e... 141 3e-38 2
(BJ411964) Dictyostelium discoideum cDNA clone:ddv6a16, 5' e... 141 3e-38 2
(BJ360666) Dictyostelium discoideum cDNA clone:ddc7b08, 5' e... 141 3e-38 2
(BJ328461) Dictyostelium discoideum cDNA clone:dda28c11, 5' ... 141 3e-38 2
(BJ328439) Dictyostelium discoideum cDNA clone:dda28n03, 5' ... 141 3e-38 2
(BJ327398) Dictyostelium discoideum cDNA clone:dda20e10, 5' ... 141 3e-38 2
(BJ327099) Dictyostelium discoideum cDNA clone:dda19k05, 5' ... 141 3e-38 2
(BJ325327) Dictyostelium discoideum cDNA clone:dda13j19, 5' ... 141 3e-38 2
(BJ324509) Dictyostelium discoideum cDNA clone:dda6l13, 5' e... 141 3e-38 2
(BJ323346) Dictyostelium discoideum cDNA clone:dda10m01, 5' ... 141 3e-38 2
(BJ388890) Dictyostelium discoideum cDNA clone:dds16n13, 5' ... 141 3e-37 3
(BJ415131) Dictyostelium discoideum cDNA clone:ddv21d13, 5' ... 141 5e-37 2
(BJ397324) Dictyostelium discoideum cDNA clone:dds45k22, 5' ... 141 5e-37 2
(BJ388000) Dictyostelium discoideum cDNA clone:dds7g12, 5' e... 141 5e-37 2
(BJ387414) Dictyostelium discoideum cDNA clone:dds2k10, 5' e... 141 5e-37 2
(BJ358961) Dictyostelium discoideum cDNA clone:ddc12l02, 5' ... 141 5e-37 2
(BJ327837) Dictyostelium discoideum cDNA clone:dda21o22, 5' ... 141 5e-37 2
(BJ327396) Dictyostelium discoideum cDNA clone:dda20d12, 5' ... 141 7e-36 2
(BJ364177) Dictyostelium discoideum cDNA clone:ddc30a14, 5' ... 141 8e-36 2
(BJ325554) Dictyostelium discoideum cDNA clone:dda1j10, 5' e... 125 2e-35 3
(BJ388352) Dictyostelium discoideum cDNA clone:dds9k02, 5' e... 141 3e-35 2
(BJ327108) Dictyostelium discoideum cDNA clone:dda19n03, 5' ... 141 3e-35 2
(BJ327063) Dictyostelium discoideum cDNA clone:dda19b03, 5' ... 141 3e-35 2
(BJ325878) Dictyostelium discoideum cDNA clone:dda2c19, 5' e... 141 3e-35 2
(BJ323810) Dictyostelium discoideum cDNA clone:dda12i07, 5' ... 141 3e-35 2
(BJ412676) Dictyostelium discoideum cDNA clone:ddv9o10, 5' e... 141 3e-35 2
(BJ324758) Dictyostelium discoideum cDNA clone:dda7i20, 5' e... 141 3e-35 2
(BJ417638) Dictyostelium discoideum cDNA clone:ddv28d11, 5' ... 131 3e-35 2
(BJ412232) Dictyostelium discoideum cDNA clone:ddv7p12, 5' e... 141 4e-34 2
(BJ386735) Dictyostelium discoideum cDNA clone:dds10l07, 5' ... 141 4e-34 2
(BJ329701) Dictyostelium discoideum cDNA clone:dda25p24, 5' ... 141 4e-34 2
(BJ329606) Dictyostelium discoideum cDNA clone:dda25k15, 5' ... 137 2e-32 2
(BJ412208) Dictyostelium discoideum cDNA clone:ddv7i11, 5' e... 141 4e-31 2
(BJ326448) Dictyostelium discoideum cDNA clone:dda16c18, 5' ... 141 4e-31 2
(BJ411257) Dictyostelium discoideum cDNA clone:ddv3k16, 5' e... 141 9e-29 1
(BJ361237) Dictyostelium discoideum cDNA clone:ddc16i12, 5' ... 141 9e-29 1
(BJ359529) Dictyostelium discoideum cDNA clone:ddc15a10, 5' ... 141 9e-29 1
(BJ324563) Dictyostelium discoideum cDNA clone:dda6m21, 5' e... 141 9e-29 1
(DJ133075) Method for identification of useful proteins deri... 80 1e-28 6
(EC825203) SME00006195 esmbsro2 Sawyeria marylandensis cDNA,... 125 1e-26 3
(EC825883) SME00005993 esmbsro2 Sawyeria marylandensis cDNA,... 125 1e-26 3
(BJ430518) Dictyostelium discoideum cDNA clone:ddv7d18, 3' e... 72 1e-25 3
(AM847585) Nicotiana tabacum EST, clone nt005094019. 68 2e-25 6
(DY894456) CeleSEQ14032 Cunninghamella elegans pBluescript (... 50 5e-25 5
(DY888146) CeleSEQ3603 Cunninghamella elegans pBluescript (E... 50 5e-25 5
(DY891394) CeleSEQ10070 Cunninghamella elegans pBluescript (... 50 4e-24 5
(EC759781) PPE00004909 Agencourt Biosciences Agen-0020 Non-n... 70 1e-23 5
(BH146593) ENTQP01TR Entamoeba histolytica Sheared DNA Entam... 54 4e-23 5
(BJ343955) Dictyostelium discoideum cDNA clone:dda17p18, 3' ... 100 6e-23 2
(AU053923) Dictyostelium discoideum slug cDNA, clone SLK167. 115 5e-21 1

>(AF095929) Dictyostelium discoideum actin related protein 2 (arpB)
mRNA, complete cds.
Length = 1466

Score = 2502 bits (1262), Expect(2) = 0.0
Identities = 1262/1262 (100%)
Strand = Plus / Plus


Query: 202 ctattatttatccatatttaacacccacaccataatttattgtattaatatatatataag 261
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 162 ctattatttatccatatttaacacccacaccataatttattgtattaatatatatataag 221


Query: 262 ctaaaaaatggattcaaataaagttatcgttatggataatggtactggttttgtaaaatg 321
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 222 ctaaaaaatggattcaaataaagttatcgttatggataatggtactggttttgtaaaatg 281


Query: 322 tggttttgcaggtgcaaatttcccaacagccatttttccatcaatggttggtagaccaat 381
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 282 tggttttgcaggtgcaaatttcccaacagccatttttccatcaatggttggtagaccaat 341


Query: 382 tttacgttcagaagaaaaggtagaaaatgtagagattaaagatattatggttggtgatga 441
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 342 tttacgttcagaagaaaaggtagaaaatgtagagattaaagatattatggttggtgatga 401


Query: 442 agcagccaaattaagatcaatgttacaaatcacctatccattggaaaatggtatcattcg 501
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 402 agcagccaaattaagatcaatgttacaaatcacctatccattggaaaatggtatcattcg 461


Query: 502 taattgggatgatattacacacgtatgggactatgcacttaaagagaaattaaaagttag 561
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 462 taattgggatgatattacacacgtatgggactatgcacttaaagagaaattaaaagttag 521


Query: 562 tgatccaactgaatgcaagatcctcttgaccgaaccaccaatgaatccagttgcaaatcg 621
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 522 tgatccaactgaatgcaagatcctcttgaccgaaccaccaatgaatccagttgcaaatcg 581


Query: 622 tcaaaaaatgattgaatgtatgtttgaaaagtatggattccaagcagtttacgtagcaat 681
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 582 tcaaaaaatgattgaatgtatgtttgaaaagtatggattccaagcagtttacgtagcaat 641


Query: 682 tcaagccgtactcacactctatgctcaaggtctcttgactggtgttgtcgtagattcagg 741
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 642 tcaagccgtactcacactctatgctcaaggtctcttgactggtgttgtcgtagattcagg 701


Query: 742 tgatggtgtcacccatatcattccagtctatgagggttactcaatcccacatttgactcg 801
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 702 tgatggtgtcacccatatcattccagtctatgagggttactcaatcccacatttgactcg 761


Query: 802 tcgtctcgatgttgccggtcgtgatgtaactcgttacctcatcaaattattattactccg 861
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 762 tcgtctcgatgttgccggtcgtgatgtaactcgttacctcatcaaattattattactccg 821


Query: 862 tggttacgctttcaatcgtaccgccgatttcgaaaccatccgtcaaatcaaagagaaact 921
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 822 tggttacgctttcaatcgtaccgccgatttcgaaaccatccgtcaaatcaaagagaaact 881


Query: 922 ctgttatgtcgcatacgatgttcaacaagagatgaaattggcctcagagaccactgttct 981
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 882 ctgttatgtcgcatacgatgttcaacaagagatgaaattggcctcagagaccactgttct 941


Query: 982 cgtcgaaaactacaccctcccagacggtcgtgtaatcaaagttggccaagagagattcca 1041
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 942 cgtcgaaaactacaccctcccagacggtcgtgtaatcaaagttggccaagagagattcca 1001


Query: 1042 agcctctgaagccctcttcaatccatctttggtcgatgtcgaaggtggtggtgtccatga 1101
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1002 agcctctgaagccctcttcaatccatctttggtcgatgtcgaaggtggtggtgtccatga 1061


Query: 1102 acaattgtttgattgtatcaccaaggcagaccgtgatcttcaacaaggtttctatcaaca 1161
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1062 acaattgtttgattgtatcaccaaggcagaccgtgatcttcaacaaggtttctatcaaca 1121


Query: 1162 tatcgtcctttctggtggttcctctatgtatccaggtttaccatctcgtctcgaaaagga 1221
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1122 tatcgtcctttctggtggttcctctatgtatccaggtttaccatctcgtctcgaaaagga 1181


Query: 1222 aattagatctctctatttggaacgtgtattaaaaggaaacaaagaaggtctcgctaaatt 1281
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1182 aattagatctctctatttggaacgtgtattaaaaggaaacaaagaaggtctcgctaaatt 1241


Query: 1282 caaatgcagaatcgaagatccaccaagaagaaagcacatggttttcctcggtggtgctgt 1341
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1242 caaatgcagaatcgaagatccaccaagaagaaagcacatggttttcctcggtggtgctgt 1301


Query: 1342 cttggctgatcttaccaaggatcgtgatgatttctggattaccaaagctgaatacatgga 1401
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1302 cttggctgatcttaccaaggatcgtgatgatttctggattaccaaagctgaatacatgga 1361


Query: 1402 aaaaggttttggtgctttagataaattaactaaattatctgtttaaatgaaataaatata 1461
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1362 aaaaggttttggtgctttagataaattaactaaattatctgtttaaatgaaataaatata 1421


Query: 1462 at 1463
||
Sbjct: 1422 at 1423

Score = 141 bits (71), Expect(2) = 0.0
Identities = 71/71 (100%)
Strand = Plus / Plus


Query: 106 cattgtaaattcgataataaggggatttaaaaaaggaatcattttttttcactctttatt 165
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 66 cattgtaaattcgataataaggggatttaaaaaaggaatcattttttttcactctttatt 125


Query: 166 ttgtacactat 176
|||||||||||
Sbjct: 126 ttgtacactat 136

Lambda K H
1.37 0.711 1.31

Matrix: blastn matrix:1 -3
Number of Sequences: 92845959
Number of Hits to DB: 1,646,332,643
Number of extensions: 120102821
Number of successful extensions: 7442428
Number of sequences better than 10.0: 5912
Length of query: 1572
Length of database: 95,242,211,685
Length adjustment: 24
Effective length of query: 1548
Effective length of database: 97,308,875,965
Effective search space: 150634139993820
Effective search space used: 150634139993820
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)

protein update 2009. 7.13
Homology vs Protein
Query= Contig-U14926-1 (Contig-U14926-1Q) /CSM_Contig/Contig-U14926-1Q.Seq.d
(1572 letters)

Database: nrp_B
3,236,559 sequences; 1,051,180,864 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value

(O96621) RecName: Full=Actin-related protein 2; AltName: Full=Ac... 751 0.0
(P53487) RecName: Full=Actin-related protein 2; AltName: Full=Ac... 573 e-162
(Q5BL41) RecName: Full=Actin-related protein 2; AltName: Full=Ac... 550 e-155
AY891099_1(AY891099|pid:none) Synthetic construct Homo sapiens c... 550 e-155
(Q5M7U6) RecName: Full=Actin-related protein 2; AltName: Full=Ac... 550 e-155
(Q7ZTP2) RecName: Full=Actin-related protein 2-A; AltName: Full=... 550 e-155
BC047530_1(BC047530|pid:none) Mus musculus ARP2 actin-related pr... 549 e-154
(P53488) RecName: Full=Actin-related protein 2; AltName: Full=Ac... 549 e-154
(Q7ZXV3) RecName: Full=Actin-related protein 2-B; AltName: Full=... 548 e-154
BT058845_1(BT058845|pid:none) Salmo salar clone ssal-rgf-507-102... 548 e-154
(Q5R4K0) RecName: Full=Actin-related protein 2; AltName: Full=Ac... 547 e-154
(Q7SXW6) RecName: Full=Actin-related protein 2-A; AltName: Full=... 545 e-153
BC014546_1(BC014546|pid:none) Homo sapiens ARP2 actin-related pr... 545 e-153
(P45888) RecName: Full=Actin-related protein 2; AltName: Full=Ac... 543 e-153
BC085445_1(BC085445|pid:none) Danio rerio zgc:101810, mRNA (cDNA... 535 e-150
AE017349_335(AE017349|pid:none) Cryptococcus neoformans var. neo... 518 e-145
AY812958_1(AY812958|pid:none) Schistosoma japonicum SJCHGC06362 ... 515 e-144
FN358757_1(FN358757|pid:none) Schistosoma mansoni genome sequenc... 515 e-144
(P53489) RecName: Full=Actin-related protein 2; AltName: Full=Ac... 514 e-144
(Q61JZ2) RecName: Full=Actin-related protein 2; AltName: Full=Ac... 506 e-141
(Q9LSD6) RecName: Full=Actin-related protein 2; AltName: Full=Pr... 505 e-141
AF095912_1(AF095912|pid:none) Arabidopsis thaliana actin related... 502 e-140
(A2YUL5) RecName: Full=Actin-related protein 2; 494 e-138
(Q6Z256) RecName: Full=Actin-related protein 2; &AP005298_7(AP0... 494 e-138
AM920428_1197(AM920428|pid:none) Penicillium chrysogenum Wiscons... 485 e-135
CP000500_586(CP000500|pid:none) Pichia stipitis CBS 6054 chromos... 482 e-134
AE017349_336(AE017349|pid:none) Cryptococcus neoformans var. neo... 481 e-134
(P32381) RecName: Full=Actin-related protein 2; AltName: Full=Ac... 478 e-133
CR382134_276(CR382134|pid:none) Debaryomyces hansenii strain CBS... 477 e-133
CR382123_165(CR382123|pid:none) Kluyveromyces lactis strain NRRL... 473 e-132
AE016817_716(AE016817|pid:none) Ashbya gossypii (= Eremothecium ... 471 e-131
BC036253_1(BC036253|pid:none) Homo sapiens ARP2 actin-related pr... 471 e-131
CU633447_45(CU633447|pid:none) Podospora anserina genomic DNA ch... 467 e-130
AK295157_1(AK295157|pid:none) Homo sapiens cDNA FLJ51656 complet... 465 e-129
AE017349_337(AE017349|pid:none) Cryptococcus neoformans var. neo... 446 e-123
CR954214_336(CR954214|pid:none) Ostreococcus tauri strain OTTH05... 428 e-118
CP000600_313(CP000600|pid:none) Ostreococcus lucimarinus CCE9901... 423 e-116
AM270168_194(AM270168|pid:none) Aspergillus niger contig An08c01... 413 e-114
AK301634_1(AK301634|pid:none) Homo sapiens cDNA FLJ51655 complet... 390 e-107
AY157673_1(AY157673|pid:none) Tetrahymena thermophila actin-rela... 354 6e-96
DQ493626_1(DQ493626|pid:none) Trypanosoma brucei actin-related p... 352 3e-95
CR855992_1(CR855992|pid:none) Paramecium tetraurelia macronuclea... 352 3e-95
AK033014_1(AK033014|pid:none) Mus musculus 12 days embryo female... 346 1e-93
EU980397_1(EU980397|pid:none) Naegleria fowleri strain Nf 69 act... 343 1e-92
U37719_1(U37719|pid:none) Naegleria fowleri actin gene, complete... 343 1e-92
(P45886) RecName: Full=Actin-3, muscle-specific; &L12255_1(L122... 343 1e-92
(Q9NJV4) RecName: Full=Actin-1; &AF101729_1(AF101729|pid:none) 342 2e-92
AJ292554_1(AJ292554|pid:none) Daphnia magna mRNA for actin. 342 2e-92
AY588061_1(AY588061|pid:none) Homalodisca coagulata putative mus... 342 2e-92
(P07836) RecName: Full=Actin, muscle-type A1; &S09059(S09059) &... 342 2e-92
(P27131) RecName: Full=Actin-1; AltName: Full=Actin I; &M90311_... 342 3e-92
(P53470) RecName: Full=Actin-1; &FN357409_27(FN357409|pid:none)... 342 3e-92
(P10981) RecName: Full=Actin-87E; &AE014297_1743(AE014297|pid:n... 342 3e-92
(P53458) RecName: Full=Actin-5; Flags: Fragment; &U27836_1(U278... 342 3e-92
(P45887) RecName: Full=Actin-5, muscle-specific; &L12256_1(L122... 342 3e-92
AY817141_1(AY817141|pid:none) Apriona germari actin mRNA, comple... 342 3e-92
(P18600) RecName: Full=Actin, clone 205; &S11450(S11450) &X5260... 341 4e-92
AY703989_1(AY703989|pid:none) Aplysia californica actin ovestest... 341 4e-92
(P69004) RecName: Full=Actin-15B; &(P69005) RecName: Fu &M35323... 341 4e-92
EU825991_1(EU825991|pid:none) Mantichorula semenowi beta-actin m... 341 4e-92
EU247116_1(EU247116|pid:none) Lycosa singoriensis actin 5C mRNA,... 341 4e-92
AB264725_1(AB264725|pid:none) Papilio xuthus mRNA for actin, com... 341 5e-92
A48449(A48449)Actin-1A - nematode (Onchocerca volvulus) 341 5e-92
(P69002) RecName: Full=Actin CyI, cytoplasmic; &(P69003) RecNam... 341 5e-92
(P02574) RecName: Full=Actin, larval muscle; AltName: Full=Actin... 341 5e-92
AF079359_1(AF079359|pid:none) Setaria digitata actin gene, compl... 341 5e-92
DQ007446_1(DQ007446|pid:none) Cirrhinus molitorella beta-actin m... 340 6e-92
U52519_1(U52519|pid:none) Dugesia tigrina actin mRNA, complete c... 340 6e-92
(P30162) RecName: Full=Actin-1; &M84916_1(M84916|pid:none) 340 6e-92
FN357409_26(FN357409|pid:none) Schistosoma mansoni genome sequen... 340 6e-92
AF393832_1(AF393832|pid:none) Morulius calbasu beta-actin mRNA, ... 340 8e-92
EU035314_1(EU035314|pid:none) Mamestra brassicae beta actin mRNA... 340 8e-92
(P02578) RecName: Full=Actin-1; &ATAX(A92886;A03004) &V00002_1(... 340 8e-92
(P53459) RecName: Full=Actin-6; Flags: Fragment; &U27837_1(U278... 340 8e-92
EF490893_1(EF490893|pid:none) Lepeophtheirus salmonis clone LS00... 340 8e-92
EU301432_1(EU301432|pid:none) Culex nigripalpus actin (Act-1) ge... 340 8e-92
AK151385_1(AK151385|pid:none) Mus musculus bone marrow macrophag... 340 8e-92
AY694422_1(AY694422|pid:none) Blakeslea trispora gamma-actin (ac... 340 8e-92
(P11426) RecName: Full=Actin; &ATAXE(A29877;A54526;S33463) &M16... 340 8e-92
EU128481_1(EU128481|pid:none) Tanichthys albonubes beta-actin mR... 340 8e-92
DQ023309_1(DQ023309|pid:none) Culex pipiens pipiens actin mRNA, ... 340 8e-92
AY335441_1(AY335441|pid:none) Chlamys farreri actin mRNA, comple... 340 1e-91
AY531222_1(AY531222|pid:none) Aedes aegypti pupal-specific fligh... 340 1e-91
(P18603) RecName: Full=Actin, clone 403; &BC107847_1(BC107847|p... 340 1e-91
AK339852_1(AK339852|pid:none) Acyrthosiphon pisum ACYPI006035 mR... 340 1e-91
AB169918_1(AB169918|pid:none) Macaca fascicularis brain cDNA, cl... 340 1e-91
(P53460) RecName: Full=Actin, muscle 1A; &D29014_1(D29014|pid:n... 340 1e-91
ATURS(A03001;A60829) actin CyI - sea urchin (Strongylocentrotus ... 340 1e-91
AF076516_1(AF076516|pid:none) Molgula oculata clone MocuCA1 cyto... 340 1e-91
(P83967) RecName: Full=Actin, indirect flight muscle; AltName: F... 340 1e-91
AY289764_1(AY289764|pid:none) Aedes aegypti muscle-specific acti... 340 1e-91
(O65315) RecName: Full=Actin; &AF061019_1(AF061019|pid:none) 340 1e-91
S16709(S16709;S08596) actin 2 - Caenorhabditis elegans &X16797_... 339 1e-91
(P30163) RecName: Full=Actin-2; &M84915_1(M84915|pid:none) 339 1e-91
J04181_1(J04181|pid:none) Mouse A-X actin mRNA, complete cds. 339 1e-91
AK147787_1(AK147787|pid:none) Mus musculus melanocyte cDNA, RIKE... 339 1e-91
AB060287_1(AB060287|pid:none) Lampetra japonica LjCA1 mRNA for c... 339 1e-91
EU234531_1(EU234531|pid:none) Crassostrea ariakensis beta-actin ... 339 1e-91
(P10984) RecName: Full=Actin-2; &T24448(T24448) &Z81584_9(Z8158... 339 1e-91
(P49128) RecName: Full=Actin-1; 339 1e-91
ATBOB(E14185;A39105;A02999;A14185) actin beta - bovine (tentativ... 339 1e-91
(P10986) RecName: Full=Actin-4; &AY372758_1(AY372758|pid:none) ... 339 1e-91
AY550069_1(AY550069|pid:none) Sus scrofa cytoskeletal beta actin... 339 1e-91
AF416454_1(AF416454|pid:none) Passer domesticus beta-actin mRNA,... 339 1e-91
(O18840) RecName: Full=Actin, cytoplasmic 1; AltName: Full=Beta-... 339 1e-91
DQ369967_1(DQ369967|pid:none) Ciona intestinalis actin mRNA, com... 339 1e-91
AF100986_1(AF100986|pid:none) Penaeus monodon actin 1 (act1) mRN... 339 2e-91
(P18601) RecName: Full=Actin, clone 211; &S11451(S11451) &X5260... 339 2e-91
AK151386_1(AK151386|pid:none) Mus musculus bone marrow macrophag... 339 2e-91
AB283042_1(AB283042|pid:none) Orgyia thyellina OtAct mRNA for cy... 339 2e-91
(O42161) RecName: Full=Actin, cytoplasmic 1; AltName: Full=Beta-... 339 2e-91
(P53471) RecName: Full=Actin-2; &AF223400_1(AF223400|pid:none) ... 339 2e-91
AF076518_1(AF076518|pid:none) Molgula oculata clone MocuCA2 cyto... 339 2e-91
(O16808) RecName: Full=Actin; &AF017427_1(AF017427|pid:none) 339 2e-91
AF200957_1(AF200957|pid:none) Rhynchocypris oxycephalus beta-act... 339 2e-91
EU128482_1(EU128482|pid:none) Tanichthys albonubes beta-actin ge... 339 2e-91
(Q964E1) RecName: Full=Actin, cytoplasmic; &AF329439_1(AF329439... 338 2e-91
AK150866_1(AK150866|pid:none) Mus musculus bone marrow macrophag... 338 2e-91
AB199890_1(AB199890|pid:none) Pagrus major gene for beta cytopla... 338 2e-91
(Q6P378) RecName: Full=Actin, cytoplasmic 2; AltName: Full=Gamma... 338 2e-91
(P35432) RecName: Full=Actin-1; &L07773_1(L07773|pid:none) 338 2e-91
X13055_1(X13055|pid:none) Murine mRNA for cytoplasmic gamma-actin. 338 2e-91
AK223032_1(AK223032|pid:none) Homo sapiens mRNA for beta actin v... 338 2e-91
ATBOG(B14185;A02999) actin gamma - bovine (tentative sequence) ... 338 2e-91
(P41340) RecName: Full=Actin-3; &S49480(S49480) &Z38130_1(Z3813... 338 2e-91
(Q5JAK2) RecName: Full=Actin, cytoplasmic 2; AltName: Full=Gamma... 338 2e-91
AB086889_1(AB086889|pid:none) Halocynthia roretzi mRNA for muscl... 338 2e-91
(P10983) RecName: Full=Actin-1/3; &S16710(S16710;S05516;S07251;... 338 2e-91
FJ205611_1(FJ205611|pid:none) Acipenser transmontanus beta-actin... 338 2e-91
AY892296_1(AY892296|pid:none) Synthetic construct Homo sapiens c... 338 2e-91
BC016045_1(BC016045|pid:none) Homo sapiens actin, beta, mRNA (cD... 338 2e-91
(P53689) RecName: Full=Actin; &A73764_1(A73764|pid:none) &S7037... 338 2e-91
T51178(T51178) actin ACT2 [imported] - Striga asiatica &U68462_... 338 2e-91
(Q25010) RecName: Full=Actin, cytoplasmic A3a; &AF286059_1(AF28... 338 2e-91
(P20904) RecName: Full=Actin; &M33963_1(M33963|pid:none) &S1412... 338 2e-91
(O15998) RecName: Full=Actin, muscle; &AB008817_1(AB008817|pid:... 338 2e-91
AB039726_1(AB039726|pid:none) Carassius auratus mRNA for beta ac... 338 2e-91
AF466279_1(AF466279|pid:none) Tigriopus japonicus beta-actin gen... 338 2e-91
(P84336) RecName: Full=Actin, cytoplasmic 1; AltName: Full=Beta-... 338 2e-91
(Q964E3) RecName: Full=Actin, cytoplasmic; &AF329437_1(AF329437... 338 2e-91
AY547732_1(AY547732|pid:none) Ornithodoros moubata actin mRNA, c... 338 3e-91
X00182_1(X00182|pid:none) Gallus gallus cytoplasmic beta-actin g... 338 3e-91
(P15475) RecName: Full=Actin, cytoplasmic 1; AltName: Full=Beta ... 338 3e-91
FJ379533_1(FJ379533|pid:none) Neotyphodium lolii actin (actA) ge... 338 3e-91
AK151468_1(AK151468|pid:none) Mus musculus bone marrow macrophag... 338 3e-91
EU019716_1(EU019716|pid:none) Haemaphysalis longicornis strain g... 338 3e-91
(O18500) RecName: Full=Actin-2; &Y13665_1(Y13665|pid:none) 338 3e-91
EU169821_1(EU169821|pid:none) Dictyocaulus viviparus actin varia... 338 3e-91
AB208021_1(AB208021|pid:none) Ornithodoros moubata mRNA for acti... 338 3e-91
X16798_1(X16798|pid:none) C.elegans act3 gene. 338 3e-91
AJ889837_1(AJ889837|pid:none) Ixodes ricinus mRNA for actin (act... 338 3e-91
FJ217207_1(FJ217207|pid:none) Homarus americanus skeletal muscle... 338 3e-91
AF358263_1(AF358263|pid:none) Drosophila virilis actin E2 gene, ... 338 3e-91
DQ657949_1(DQ657949|pid:none) Aedes albopictus actin mRNA, compl... 338 3e-91
DQ058212_1(DQ058212|pid:none) Phascolarctos cinereus beta-actin ... 338 3e-91
(Q6NVA9) RecName: Full=Actin, cytoplasmic 1; AltName: Full=Beta-... 338 3e-91
FJ554633_1(FJ554633|pid:none) Agelena silvatica actin mRNA, comp... 338 3e-91
CR954256_1(CR954256|pid:none) Anopheles gambiae Pen-1 region; BA... 338 3e-91
(P12717) RecName: Full=Actin, muscle; &JS0190(JS0190) &M26500_1... 338 3e-91
(Q91ZK5) RecName: Full=Actin, cytoplasmic 1; AltName: Full=Beta-... 338 4e-91
A25135(A25135)actin A3, cytosolic - silkworm 338 4e-91
BT074966_1(BT074966|pid:none) Osmerus mordax clone omor-eva-519-... 338 4e-91
AF135499_1(AF135499|pid:none) Platichthys flesus beta-actin gene... 338 4e-91
AF301605_1(AF301605|pid:none) Hypophthalmichthys molitrix beta-a... 338 4e-91
FJ217215_1(FJ217215|pid:none) Homarus americanus cytoplasmic typ... 338 4e-91
(P04829) RecName: Full=Actin, cytoplasmic A3; &U49854_1(U49854|... 338 4e-91
(P53478) RecName: Full=Actin, cytoplasmic type 5; &X02648_1(X02... 338 4e-91
U22507_1(U22507|pid:none) Heliocidaris tuberculata cytoplasmic a... 338 4e-91
FJ826616_1(FJ826616|pid:none) Epichloe festucae strain E2368 gam... 338 4e-91
(P12716) RecName: Full=Actin, cytoplasmic; &JS0189(JS0189) &M26... 338 4e-91
FJ455439_1(FJ455439|pid:none) Holothuria glaberrima actin isofor... 338 4e-91
AF082863_1(AF082863|pid:none) Dreissena polymorpha cytoplasmic a... 338 4e-91
(Q964D9) RecName: Full=Actin, cytoplasmic; &AF329441_1(AF329441... 337 5e-91
AY395871_1(AY395871|pid:none) Cyprinus carpio skeletal muscle ac... 337 5e-91
(P10987) RecName: Full=Actin-5C; &(P84183) RecName: Fu &(P84184... 337 5e-91
AY297438_1(AY297438|pid:none) Aiptasia pulchella beta actin mRNA... 337 5e-91
AY395870_1(AY395870|pid:none) Cyprinus carpio skeletal muscle al... 337 5e-91
(P92179) RecName: Full=Actin, cytoplasmic; &AF329436_1(AF329436... 337 5e-91
AY813805_1(AY813805|pid:none) Schistosoma japonicum SJCHGC06318 ... 337 5e-91
BT052195_1(BT052195|pid:none) Medicago truncatula clone MTYF9_FA... 337 5e-91
AY898751_1(AY898751|pid:none) Ixodes ricinus actin mRNA, partial... 337 5e-91
(P79818) RecName: Full=Actin, cytoplasmic 1; AltName: Full=Beta-... 337 5e-91
AY309091_1(AY309091|pid:none) Cyprinus carpio skeletal muscle ac... 337 5e-91
CU640366_1192(CU640366|pid:none) Podospora anserina genomic DNA ... 337 5e-91
(P53479) RecName: Full=Actin, alpha skeletal muscle; AltName: Fu... 337 5e-91
AB086826_1(AB086826|pid:none) Galaxea fascicularis LGfact mRNA f... 337 5e-91
AM270331_1(AM270331|pid:none) Aspergillus niger contig An15c0040... 337 5e-91
EF667345_1(EF667345|pid:none) Anas platyrhynchos beta-actin (ACT... 337 5e-91
BC045879_1(BC045879|pid:none) Danio rerio bactin2, mRNA (cDNA cl... 337 5e-91
AY491380_1(AY491380|pid:none) Acanthopagrus schlegelii beta acti... 337 5e-91
BC046739_1(BC046739|pid:none) Xenopus laevis similar to actin al... 337 7e-91
EU601173_1(EU601173|pid:none) Agrotis ipsilon cytoplasmic actin ... 337 7e-91
ATMUM1(JA0066;S68111) actin - Arabidopsis thaliana &M20016_1(M2... 337 7e-91
(P10995) RecName: Full=Actin, alpha sarcomeric/cardiac; AltName:... 337 7e-91
AY222742_1(AY222742|pid:none) Danio rerio actin mRNA, complete c... 337 7e-91
(P10671) RecName: Full=Actin-1/3; &AY049293_1(AY049293|pid:none... 337 7e-91
(P53464) RecName: Full=Actin, cytoskeletal; AltName: Full=M; &U... 337 7e-91
BT077850_1(BT077850|pid:none) Lepeophtheirus salmonis Pacific fo... 337 7e-91
BT076643_1(BT076643|pid:none) Caligus rogercresseyi clone crog-e... 337 7e-91
DQ665650_1(DQ665650|pid:none) Torenia fournieri actin 2 (ACT2) g... 337 7e-91
DQ238707_1(DQ238707|pid:none) Lythrurus umbratilis beta-actin ge... 337 7e-91
DQ018720_1(DQ018720|pid:none) Pungitius pungitius beta-actin mRN... 337 7e-91
BT077399_1(BT077399|pid:none) Lepeophtheirus salmonis Pacific fo... 337 7e-91
ATRTC(A38571;A02999)actin beta - rat 337 7e-91
AF318603_1(AF318603|pid:none) Heterodera glycines actin 1 mRNA, ... 337 7e-91
(Q8RYC2) RecName: Full=Putative actin-5; &H84849(H84849) &U9043... 337 9e-91
(P53457) RecName: Full=Actin-3; &U27834_1(U27834|pid:none) 337 9e-91
(O17320) RecName: Full=Actin; &AF026063_1(AF026063|pid:none) &F... 337 9e-91
EU624346_1(EU624346|pid:none) Sarcoptes scabiei type hominis act... 337 9e-91
AY507963_1(AY507963|pid:none) Spodoptera exigua actin mRNA, comp... 337 9e-91
AK223055_1(AK223055|pid:none) Homo sapiens mRNA for beta actin v... 337 9e-91
DQ656598_1(DQ656598|pid:none) Spinibarbus denticulatus beta-acti... 337 9e-91
S43509(S43509) actin - California sea hare &U01352_1(U01352|pid... 337 9e-91
(O13419) RecName: Full=Actin; &AJ000335_1(AJ000335|pid:none) 337 9e-91
(P02572) RecName: Full=Actin-42A; &AE013599_115(AE013599|pid:no... 337 9e-91
ATRB(A92182;A14185;S65873;S70610;S44393;A02994)actin, skeletal m... 336 1e-90
AB035660_1(AB035660|pid:none) Branchiostoma belcheri BbNA1 mRNA ... 336 1e-90
(Q93129) RecName: Full=Actin, cytoplasmic; AltName: Full=BbCA1; ... 336 1e-90
AY986487_1(AY986487|pid:none) Rana catesbeiana cardiac alpha act... 336 1e-90
EU143771_1(EU143771|pid:none) Poecilia reticulata beta-actin gen... 336 1e-90
(Q964E2) RecName: Full=Actin, cytoplasmic; &AF329438_1(AF329438... 336 1e-90
AY893990_1(AY893990|pid:none) Synthetic construct Homo sapiens c... 336 1e-90
(P68133) RecName: Full=Actin, alpha skeletal muscle; AltName: Fu... 336 1e-90
(P53463) RecName: Full=Actin, cytoskeletal; AltName: Full=M; &U... 336 1e-90
FJ669294_1(FJ669294|pid:none) Crassostrea gigas isolate IV_24 ac... 336 1e-90
(P68140) RecName: Full=Actin, alpha skeletal muscle A; AltName: ... 336 2e-90
AY524976_1(AY524976|pid:none) Cydia pomonella actin gene, partia... 336 2e-90
(P53455) RecName: Full=Actin; &U17498_1(U17498|pid:none) 336 2e-90
AF368030_1(AF368030|pid:none) Heliothis virescens actin mRNA, co... 336 2e-90
AY272628_1(AY272628|pid:none) Rana lessonae cytoplasmic actin ty... 336 2e-90
D84318_1(D84318|pid:none) Schizosaccharomyces pombe cps8 gene fo... 336 2e-90
EU244396_1(EU244396|pid:none) Haliotis diversicolor clone HDr4CJ... 336 2e-90
AJ537421_1(AJ537421|pid:none) Dicentrarchus labrax mRNA for beta... 336 2e-90
AJ269567_1(AJ269567|pid:none) Artemia franciscana mRNA for actin... 336 2e-90
T51177(T51177) actin [imported] - Striga asiatica &U68461_1(U68... 336 2e-90
(P53506) RecName: Full=Actin, cytoplasmic type 8; &M24770_1(M24... 336 2e-90
AY026072_1(AY026072|pid:none) Monosiga brevicollis actin mRNA, c... 336 2e-90
DQ017265_1(DQ017265|pid:none) Orientobilharzia turkestanicum act... 336 2e-90
AK167960_1(AK167960|pid:none) Mus musculus TIB-55 BB88 cDNA, RIK... 336 2e-90
FJ669288_1(FJ669288|pid:none) Crassostrea gigas isolate I_8 acti... 336 2e-90
AF180887_1(AF180887|pid:none) Danio rerio skeletal alpha1 actin ... 336 2e-90
(Q9Y702) RecName: Full=Actin-1; AltName: Full=Beta-actin; &AB02... 336 2e-90
EU100952_1(EU100952|pid:none) Bursaphelenchus xylophilus actin m... 336 2e-90
AF302045_1(AF302045|pid:none) Rhodeus notatus beta-actin gene, c... 336 2e-90
K00670_1(K00670|pid:none) D.melanogaster actin gene, complete cd... 336 2e-90
DQ874398_1(DQ874398|pid:none) Pacifastacus leniusculus beta acti... 336 2e-90
(P53480) RecName: Full=Actin, alpha cardiac; &AB016259_1(AB0162... 335 2e-90
X05393_1(X05393|pid:none) Xenopus tropicalis alpha2 gene for sar... 335 2e-90
FJ217208_1(FJ217208|pid:none) Homarus americanus skeletal muscle... 335 2e-90
(Q90X97) RecName: Full=Actin, alpha skeletal muscle; AltName: Fu... 335 2e-90
BC071386_1(BC071386|pid:none) Danio rerio zgc:86709, mRNA (cDNA ... 335 2e-90
J01168_1(J01168|pid:none) Strongylocentrotus purpuratus actin 2 ... 335 2e-90
AY161281_1(AY161281|pid:none) Globodera rostochiensis actin 2 mR... 335 2e-90
BC108543_1(BC108543|pid:none) Xenopus laevis Actin, cytoplasmic ... 335 2e-90
AB036756_1(AB036756|pid:none) Pagrus major mRNA for B-actin, com... 335 3e-90
BC045406_1(BC045406|pid:none) Danio rerio actin, alpha 1, skelet... 335 3e-90
BC134665_1(BC134665|pid:none) Bos taurus actin, alpha 1, skeleta... 335 3e-90
(P17304) RecName: Full=Actin, muscle; &S12730(S12730) &X52868_1... 335 3e-90
AY294153_1(AY294153|pid:none) Platyamoeba placida actin mRNA, pa... 335 3e-90
DQ386914_1(DQ386914|pid:none) Lygus lineolaris putative actin mR... 335 3e-90
(P90689) RecName: Full=Actin; &Z85981_1(Z85981|pid:none) 335 3e-90
AY141970_1(AY141970|pid:none) Bos taurus beta-actin (ACTB) mRNA,... 335 3e-90
AY294156_1(AY294156|pid:none) Pelomyxa palustris actin mRNA, com... 335 3e-90
(P53465) RecName: Full=Actin, cytoskeletal 1; AltName: Full=LPC1... 335 3e-90
FJ669289_1(FJ669289|pid:none) Crassostrea gigas isolate I_15 act... 335 3e-90
AM236595_1(AM236595|pid:none) Haliotis tuberculata mRNA for acti... 335 3e-90
X04507_1(X04507|pid:none) Bombyx mori cytoplasmic actin gene A3. 335 3e-90
(P41339) RecName: Full=Actin, acrosomal process isoform; AltName... 335 3e-90
(P10365) RecName: Full=Actin; &S03126(S03126) &X07463_1(X07463|... 335 3e-90
(Q9Y707) RecName: Full=Actin-2; &AF156258_1(AF156258|pid:none) ... 335 3e-90
AY156508_1(AY156508|pid:none) Myxobolus cerebralis beta-actin mR... 335 4e-90
(P04751) RecName: Full=Actin, alpha cardiac muscle 1; AltName: F... 335 4e-90
(P02576) RecName: Full=Actin, plasmodial isoform; &ATFY(A29044;... 335 4e-90
BC072097_1(BC072097|pid:none) Xenopus laevis hypothetical protei... 335 4e-90
AE017341_452(AE017341|pid:none) Cryptococcus neoformans var. neo... 335 4e-90
(Q26065) RecName: Full=Actin, adductor muscle; &U55046_1(U55046... 335 4e-90
DQ787858_1(DQ787858|pid:none) Mizuhopecten yessoensis beta-actin... 335 4e-90
(Q9UVF3) RecName: Full=Actin; &CR382130_334(CR382130|pid:none) 335 4e-90
AY294152_1(AY294152|pid:none) Mayorella sp. JJP-2003 actin mRNA,... 335 4e-90
AF182715_1(AF182715|pid:none) Lymantria dispar actin mRNA, compl... 335 4e-90
AF163669_1(AF163669|pid:none) Dunaliella salina actin mRNA, comp... 334 5e-90
JT0385(JT0385) actin gamma - Emericella nidulans &M22869_1(M228... 334 5e-90
(Q96293) RecName: Full=Actin-8; &AC016041_1(AC016041|pid:none) ... 334 5e-90
(Q96292) RecName: Full=Actin-2; &AB026654_16(AB026654|pid:none)... 334 5e-90
U02285_1(U02285|pid:none) Bos taurus alpha skeletal actin precur... 334 5e-90
AY294155_1(AY294155|pid:none) Glaeseria mira actin mRNA, partial... 334 5e-90
EF063572_1(EF063572|pid:none) Actinidia deliciosa ACT1 (ACT1) mR... 334 5e-90
AF284835_1(AF284835|pid:none) Guillardia theta actin mRNA, parti... 334 5e-90
FJ217216_1(FJ217216|pid:none) Homarus americanus cytoplasmic typ... 334 5e-90
(Q98972) RecName: Full=Actin, alpha skeletal muscle; AltName: Fu... 334 5e-90
(P53492) RecName: Full=Actin-7; AltName: Full=Actin-2; &AB01689... 334 5e-90
AF172094_1(AF172094|pid:none) Picea rubens actin mRNA, complete ... 334 5e-90
AB013098_1(AB013098|pid:none) Nannochloris bacillaris nbact gene... 334 5e-90
M30511_1(M30511|pid:none) Sea urchin (S.purpuratus) cytoskeletal... 334 6e-90
A54728(A54728) actin alpha, cardiac - mouse (fragment) &M15501_... 334 6e-90
(P63256) RecName: Full=Actin, cytoplasmic 2; AltName: Full=Gamma... 334 6e-90
AK014307_1(AK014307|pid:none) Mus musculus 14, 17 days embryo he... 334 6e-90
(P68032) RecName: Full=Actin, alpha cardiac muscle 1; AltName: F... 334 6e-90
FJ716131_1(FJ716131|pid:none) Dicentrarchus labrax alpha actin m... 334 6e-90
(P50138) RecName: Full=Actin; &S42103(S42103) &X77857_1(X77857|... 334 6e-90
(P92182) RecName: Full=Actin-1; &JC5227(JC5227) &X96512_1(X9651... 333 8e-90
FJ560483_1(FJ560483|pid:none) Gossypium hirsutum actin 1 mRNA, c... 333 8e-90
AM465189_1(AM465189|pid:none) Vitis vinifera contig VV78X204398.... 333 8e-90
AF090970_1(AF090970|pid:none) Cosmarium botrytis actin gene, par... 333 8e-90
AY382282_1(AY382282|pid:none) Physcomitrella patens actin 1 (Act... 333 8e-90
AY305737_1(AY305737|pid:none) Gossypium hirsutum actin (ACT9) mR... 333 8e-90
DQ485686_1(DQ485686|pid:none) Solea senegalensis beta-actin mRNA... 333 8e-90
(Q2U7A3) RecName: Full=Actin; &AP007165_10(AP007165|pid:none) 333 8e-90
AB003111_1(AB003111|pid:none) Humicola grisea var. thermoidea ge... 333 8e-90
AY382284_1(AY382284|pid:none) Physcomitrella patens actin 5 (Act... 333 8e-90
AY382285_1(AY382285|pid:none) Physcomitrella patens actin 7 (Act... 333 8e-90
BC071401_1(BC071401|pid:none) Danio rerio zgc:86725, mRNA (cDNA ... 333 8e-90
EF091838_1(EF091838|pid:none) Eubalaena glacialis beta-actin mRN... 333 8e-90
EF144294_1(EF144294|pid:none) Populus trichocarpa clone PX0015_H... 333 8e-90
AF090969_1(AF090969|pid:none) Selaginella apoda actin (Ac2) gene... 333 8e-90
AB250390_1(AB250390|pid:none) Zygosaccharomyces rouxii ACT1 mRNA... 333 8e-90
FN316964_1(FN316964|pid:none) Schistosoma japonicum isolate Anhu... 333 8e-90
(P30173) RecName: Full=Actin-101; &S20093(S20093;S20092) &X5575... 333 8e-90
AY134752_1(AY134752|pid:none) Phalaenopsis hybrid cultivar actin... 333 8e-90
AF508263_1(AF508263|pid:none) Pyrocystis lunula actin mRNA, comp... 333 1e-89
AY087348_1(AY087348|pid:none) Arabidopsis thaliana clone 34479 m... 333 1e-89
AJ297725_1(AJ297725|pid:none) Ciona intestinalis mRNA for putati... 333 1e-89
AB360966_1(AB360966|pid:none) Pagrus major ACTA1 gene for skelet... 333 1e-89
AY372368_1(AY372368|pid:none) Trifolium pratense actin mRNA, com... 333 1e-89
(P91754) RecName: Full=Actin; Flags: Fragment; &Y09623_1(Y09623... 333 1e-89
AY294158_1(AY294158|pid:none) Hartmannella cantabrigiensis actin... 333 1e-89
(Q8BFZ3) RecName: Full=Beta-actin-like protein 2; AltName: Full=... 333 1e-89
AB052654_1(AB052654|pid:none) Lampetra japonica LjMA2 mRNA for m... 333 1e-89
AY857865_1(AY857865|pid:none) Linum usitatissimum actin (Act1) m... 333 1e-89
FJ869869_1(FJ869869|pid:none) Picea abies actin 2 mRNA, complete... 333 1e-89
AF267496_1(AF267496|pid:none) Salmo trutta alpha actin mRNA, com... 333 1e-89
BC075896_1(BC075896|pid:none) Danio rerio actin, alpha 2, smooth... 333 1e-89
BT071276_1(BT071276|pid:none) Picea sitchensis clone WS02817_N24... 333 1e-89
AF388172_1(AF388172|pid:none) Scyliorhinus retifer fast muscle a... 333 1e-89
FJ217209_1(FJ217209|pid:none) Homarus americanus skeletal muscle... 333 1e-89
(Q553U6) RecName: Full=Putative actin-22; &AC116305_3(AC116305|... 333 1e-89
(P17126) RecName: Full=Actin, non-muscle 6.2; &JQ0154(JQ0154) &... 333 1e-89
AY305729_1(AY305729|pid:none) Gossypium hirsutum actin (ACT7) mR... 333 1e-89
EU952376_1(EU952376|pid:none) Zea mays clone 1278863 actin-2 mRN... 333 1e-89
AB158612_1(AB158612|pid:none) Nicotiana tabacum mRNA for actin, ... 333 1e-89
AK290616_1(AK290616|pid:none) Homo sapiens cDNA FLJ78096 complet... 333 1e-89
AY294154_1(AY294154|pid:none) Thecamoeba similis actin mRNA, com... 333 1e-89
AB076674_1(AB076674|pid:none) Lethenteron japonicum LjMA1 mRNA f... 333 1e-89
ATBOSM(A02997;S13480)actin, aortic smooth muscle - bovine 333 1e-89
CU928171_791(CU928171|pid:none) Kluyveromyces thermotolerans str... 333 1e-89
(Q05214) RecName: Full=Actin; &S31933(S35257;S31933) &X63603_1(... 333 1e-89
FJ560484_1(FJ560484|pid:none) Gossypium hirsutum actin 2 mRNA, c... 333 1e-89
AB360967_1(AB360967|pid:none) Pagrus major ACTA2 gene for skelet... 333 1e-89
AY891000_1(AY891000|pid:none) Synthetic construct Homo sapiens c... 333 1e-89
ATDO(A93223;A92871;S67999;A03004)actin - slime mold (Dictyosteli... 332 2e-89
AF168615_1(AF168615|pid:none) Rivulus marmoratus beta-actin gene... 332 2e-89
BC140575_1(BC140575|pid:none) Bos taurus actin, alpha 2, smooth ... 332 2e-89
AY891034_1(AY891034|pid:none) Synthetic construct Homo sapiens c... 332 2e-89
(P41112) RecName: Full=Actin-1/2; &JN0833(JN0833) &X69058_1(X69... 332 2e-89
(Q00215) RecName: Full=Actin, cytoplasmic; &S33386(S33386;S21926) 332 2e-89
FJ217217_1(FJ217217|pid:none) Homarus americanus cytoplasmic typ... 332 2e-89
BC061264_1(BC061264|pid:none) Xenopus tropicalis hypothetical pr... 332 2e-89
AK124338_1(AK124338|pid:none) Homo sapiens cDNA FLJ42347 fis, cl... 332 2e-89
AB179839_1(AB179839|pid:none) Seriola quinqueradiata ACTB mRNA f... 332 2e-89
AF270649_1(AF270649|pid:none) Misgurnus mizolepis beta-actin gen... 332 2e-89
AF421536_1(AF421536|pid:none) Crypthecodinium cohnii actin mRNA,... 332 2e-89
AM475102_1(AM475102|pid:none) Vitis vinifera contig VV78X148227.... 332 2e-89
AY305724_1(AY305724|pid:none) Gossypium hirsutum actin (ACT2) mR... 332 2e-89
EF091836_1(EF091836|pid:none) Lagenorhynchus acutus beta-actin m... 332 2e-89
BT061870_1(BT061870|pid:none) Zea mays full-length cDNA clone ZM... 332 2e-89
AF285176_1(AF285176|pid:none) Musa ABB Group actin (ACT1) gene, ... 332 2e-89
L21915_1(L21915|pid:none) Molgula citrina muscle actin mRNA, 3' ... 332 2e-89
AB267840_1(AB267840|pid:none) Dicyema acuticephalum actin2 mRNA ... 332 2e-89
AF282624_1(AF282624|pid:none) Helianthus annuus actin mRNA, comp... 332 2e-89
(A3C6D7) RecName: Full=Actin-2; &(P0C539) RecName: Fu &AC087192... 332 3e-89
EF144552_1(EF144552|pid:none) Populus trichocarpa clone WS01110_... 332 3e-89
AY742219_1(AY742219|pid:none) Saccharum officinarum actin mRNA, ... 332 3e-89
AB117093_1(AB117093|pid:none) Cynops ensicauda b-actin mRNA for ... 332 3e-89
ATHUSM(A35020;S03286;I54050;A02996) actin alpha 2, aortic smooth... 332 3e-89
EU960271_1(EU960271|pid:none) Zea mays clone 223048 actin-1 mRNA... 332 3e-89
BT041024_1(BT041024|pid:none) Zea mays full-length cDNA clone ZM... 332 3e-89
AY398305_1(AY398305|pid:none) Danio rerio clone RK113A4D08 actin... 332 3e-89
AY870652_1(AY870652|pid:none) Isatis tinctoria actin mRNA, compl... 332 3e-89
FJ217210_1(FJ217210|pid:none) Homarus americanus skeletal muscle... 331 4e-89
AM429188_1(AM429188|pid:none) Vitis vinifera contig VV78X040868.... 331 4e-89
AF228714_1(AF228714|pid:none) Ictalurus punctatus alpha actin ge... 331 4e-89
EF144345_1(EF144345|pid:none) Populus trichocarpa clone PX0015_O... 331 4e-89
AY305725_1(AY305725|pid:none) Gossypium hirsutum actin (ACT3) mR... 331 4e-89
FJ485727_1(FJ485727|pid:none) Caragana korshinskii actin (ACT1) ... 331 4e-89
EF144249_1(EF144249|pid:none) Populus trichocarpa clone PX0011_N... 331 4e-89
EF672732_1(EF672732|pid:none) Musa acuminata actin (ACT1) gene, ... 331 4e-89
AY305734_1(AY305734|pid:none) Gossypium hirsutum actin (ACT13) m... 331 4e-89
EF091837_1(EF091837|pid:none) Megaptera novaeangliae beta-actin ... 331 4e-89
FJ696416_1(FJ696416|pid:none) Carica papaya actin mRNA, complete... 331 4e-89
AC120533_12(AC120533|pid:none) Oryza sativa (japonica cultivar-g... 331 4e-89
AY921238_1(AY921238|pid:none) Haliotis iris actin A2 gene, compl... 331 5e-89
A32798(A32798) actin - yeast (Kluyveromyces marxianus var. lacti... 331 5e-89
(Q54H30) RecName: Full=Major actin; AltName: Full=Actin-1; AltNa... 331 5e-89
AB032361_1(AB032361|pid:none) Mimosa pudica mRNA for actin isofo... 331 5e-89
AF288226_1(AF288226|pid:none) Setaria italica actin mRNA, comple... 331 5e-89
(P53461) RecName: Full=Actin, nonmuscle; &D45164_1(D45164|pid:n... 331 5e-89
(P53466) RecName: Full=Actin, cytoskeletal 2; AltName: Full=LPC2... 331 5e-89
AY305733_1(AY305733|pid:none) Gossypium hirsutum actin (ACT14) m... 331 5e-89
AK146899_1(AK146899|pid:none) Mus musculus 17 days embryo heart ... 331 5e-89
AY986488_1(AY986488|pid:none) Rana catesbeiana smooth muscle alp... 331 5e-89
(P41113) RecName: Full=Actin-3; &JN0832(JN0832) &X69060_1(X6906... 331 5e-89
AF012348_1(AF012348|pid:none) Gallus gallus smooth muscle gamma ... 330 7e-89
AF044573_1(AF044573|pid:none) Brassica oleracea actin (Act1) mRN... 330 9e-89
EU399627_1(EU399627|pid:none) Filobasidiella depauperata strain ... 330 9e-89
X15865_1(X15865|pid:none) O.sativa RAc1 gene for actin. 330 9e-89
BT039716_1(BT039716|pid:none) Zea mays full-length cDNA clone ZM... 330 9e-89
EU742742_1(EU742742|pid:none) Amphidinium carterae strain CCMP13... 330 9e-89
AB429227_1(AB429227|pid:none) Dicyema japonicum gene for actin, ... 330 9e-89
AY089535_1(AY089535|pid:none) Drosophila melanogaster LD04994 fu... 330 9e-89
AB115328_1(AB115328|pid:none) Phanerochaete chrysosporium act mR... 330 9e-89
(P07829) RecName: Full=Actin-3; AltName: Full=Actin-3-sub 1; 330 9e-89
AM992970_1(AM992970|pid:none) Candida famata var. flareri act1 g... 330 1e-88
EU742740_1(EU742740|pid:none) Amphidinium carterae strain CCMP13... 330 1e-88
BT051890_1(BT051890|pid:none) Medicago truncatula clone MTYF5_F6... 330 1e-88
AY550991_1(AY550991|pid:none) Elaeis guineensis actine (ACT1) mR... 330 1e-88
(P30167) RecName: Full=Actin-58; &S20094(S20094) &X55749_1(X557... 329 1e-88
EU742723_1(EU742723|pid:none) Amphidinium carterae strain CCMP13... 329 1e-88
EU742724_1(EU742724|pid:none) Amphidinium carterae strain CCMP13... 329 1e-88
AC134930_12(AC134930|pid:none) Oryza sativa (japonica cultivar-g... 329 1e-88
AF085345_1(AF085345|pid:none) Pythium splendens actin mRNA, comp... 329 1e-88
(P30168) RecName: Full=Actin-71; &S20095(S20095) &X55750_1(X557... 329 1e-88
AY145451_1(AY145451|pid:none) Hordeum vulgare actin mRNA, comple... 329 1e-88
EF086555_1(EF086555|pid:none) Picea sitchensis clone WS02917_J13... 329 1e-88
DQ385449_1(DQ385449|pid:none) Culex pipiens pipiens beta-actin m... 329 2e-88
EU293228_1(EU293228|pid:none) Paraphidippus aurantius clone Ph15... 329 2e-88
(O65316) RecName: Full=Actin; &AF061020_1(AF061020|pid:none) 329 2e-88
EF544569_1(EF544569|pid:none) Amanita muscaria actin (act2) mRNA... 329 2e-88
(P30171) RecName: Full=Actin-97; &S20098(S20098) &X55751_1(X557... 329 2e-88
AF276076_1(AF276076|pid:none) Ambystoma mexicanum cardiac actin ... 329 2e-88
(Q9UVX4) RecName: Full=Actin; &AB034637_1(AB034637|pid:none) 329 2e-88
BX323069_2(BX323069|pid:none) Zebrafish DNA sequence from clone ... 329 2e-88
EU328529_1(EU328529|pid:none) Lolium temulentum actin (ACT11) mR... 328 3e-88
(Q03341) RecName: Full=Actin-2; &L07774_1(L07774|pid:none) 328 3e-88
X05739_1(X05739|pid:none) Sea urchin muscle actin gene exon 2 an... 328 3e-88
BT060552_1(BT060552|pid:none) Zea mays full-length cDNA clone ZM... 328 3e-88
AB111103_1(AB111103|pid:none) Candida boidinii ACT1 gene for act... 328 3e-88
AY813626_1(AY813626|pid:none) Schistosoma japonicum clone SJCHGC... 328 3e-88
AB086243_1(AB086243|pid:none) Coryphaenoides yaquinae mRNA for s... 328 3e-88
AY039657_1(AY039657|pid:none) Chrysophrys auratus beta-actin mRN... 328 3e-88
(Q00214) RecName: Full=Actin, muscle; &S33387(S33387;S21927) 328 3e-88
ATRZ1(S10020;S11871;S12474;S12490;PQ0142)actin 1 - rice 328 3e-88
AY525329_1(AY525329|pid:none) Trichophyton rubrum actin (ACT) ge... 328 3e-88
A26559(A26559)actin type 5, cytosolic - chicken 328 3e-88
EU742735_1(EU742735|pid:none) Amphidinium carterae strain CCMP13... 328 3e-88
X16280_1(X16280|pid:none) Oryza sativa RAc1 mRNA for actin. 328 4e-88
AB231899_1(AB231899|pid:none) Symbiodinium sp. PL-TS-1 SyAct-A1 ... 328 4e-88
AY251802_1(AY251802|pid:none) Gymnochlora stellata ubiquitin/act... 328 4e-88
(P30164) RecName: Full=Actin-1; &S25488(S25488) &X67666_1(X6766... 328 4e-88
AM992961_1(AM992961|pid:none) Debaryomyces hansenii var. hanseni... 328 4e-88
AJ000376_1(AJ000376|pid:none) Helobdella triserialis mRNA for ac... 327 6e-88
(Q6S8J3) RecName: Full=POTE ankyrin domain family member E; AltN... 327 6e-88
DQ665649_1(DQ665649|pid:none) Torenia fournieri actin 1 (ACT1) g... 327 6e-88
AY305728_1(AY305728|pid:none) Gossypium hirsutum actin (ACT6) mR... 327 7e-88
AY825362_1(AY825362|pid:none) Chorispora bungeana putative actin... 327 7e-88
AM411663_1(AM411663|pid:none) Plasmodiophora brassicae actII gen... 327 7e-88
BT041049_1(BT041049|pid:none) Zea mays full-length cDNA clone ZM... 327 7e-88
J01238_1(J01238|pid:none) Maize actin 1 gene (MAc1), complete cds. 327 7e-88
EU742733_1(EU742733|pid:none) Amphidinium carterae strain CCMP13... 327 7e-88
DQ333330_1(DQ333330|pid:none) Hirudo medicinalis cytoplasmic act... 327 7e-88
(P12431) RecName: Full=Actin, muscle; 327 7e-88
DQ174766_1(DQ174766|pid:none) Symbiodinium sp. clade C actin gen... 327 1e-87
FN315420_1(FN315420|pid:none) Schistosoma japonicum isolate Anhu... 327 1e-87
BC017450_1(BC017450|pid:none) Homo sapiens, clone IMAGE:3538275,... 327 1e-87
AB097503_1(AB097503|pid:none) Ulva pertusa actin mRNA for beta-a... 327 1e-87
AF234528_1(AF234528|pid:none) Avena nuda actin 1 gene, complete ... 327 1e-87
EU742730_1(EU742730|pid:none) Amphidinium carterae strain CCMP13... 327 1e-87
EF678025_1(EF678025|pid:none) Picea sitchensis clone WS02818_M15... 327 1e-87
BT049962_1(BT049962|pid:none) Salmo salar clone ssal-evd-503-108... 326 1e-87
AL132960_5(AL132960|pid:none) Arabidopsis thaliana DNA chromosom... 326 2e-87
EF133869_1(EF133869|pid:none) Alexandrium fundyense strain GT-CA... 326 2e-87
AF091809_1(AF091809|pid:none) Anemia phyllitidis actin 2 mRNA, c... 326 2e-87
EF428193_1(EF428193|pid:none) Cryptosporidium sp. CHB-02 actin g... 325 2e-87
EU529707_1(EU529707|pid:none) Cicer arietinum actin (ACT1) mRNA,... 325 2e-87
AY382283_1(AY382283|pid:none) Physcomitrella patens actin 3 (Act... 325 2e-87
(P26183) RecName: Full=Actin; &A45634(A45634) &M86241_1(M86241|... 325 2e-87
FJ372563_1(FJ372563|pid:none) Sedum alfredii isolate Heact1 acti... 325 2e-87
FJ372564_1(FJ372564|pid:none) Sedum alfredii isolate Nheact1 act... 325 2e-87
(P46258) RecName: Full=Actin-3; &S58316(S58316) &X90378_1(X9037... 325 2e-87
EU742741_1(EU742741|pid:none) Amphidinium carterae strain CCMP13... 325 2e-87
EU293227_1(EU293227|pid:none) Dolomedes tenebrosus clone D22 act... 325 2e-87
EF428192_1(EF428192|pid:none) Cryptosporidium sp. CHB-01 actin g... 325 2e-87
EU408550_1(EU408550|pid:none) Cryptococcus bacillisporus strain ... 325 3e-87
AY904067_1(AY904067|pid:none) Musa acuminata actin 2 mRNA, compl... 325 3e-87
EU742745_1(EU742745|pid:none) Amphidinium carterae strain CCMP13... 325 3e-87
EU742721_1(EU742721|pid:none) Amphidinium carterae strain CCMP13... 325 3e-87
(Q9P4D1) RecName: Full=Actin; &AF216956_1(AF216956|pid:none) &F... 325 3e-87
(P53497) RecName: Full=Actin-12; &AL133314_4(AL133314|pid:none)... 325 4e-87
(P14235) RecName: Full=Actin; &S07639(S07639) &X16377_1(X16377|... 325 4e-87
EU408508_1(EU408508|pid:none) Cryptococcus bacillisporus strain ... 325 4e-87
EU408478_1(EU408478|pid:none) Filobasidiella neoformans strain A... 325 4e-87
AY088111_1(AY088111|pid:none) Arabidopsis thaliana clone 41421 m... 325 4e-87
S49007(S49007)actin - Pythium irregulare (fragment) 325 4e-87
B23412(B23412)actin 12 - slime mold (Dictyostelium discoideum) 325 4e-87
AF382338_1(AF382338|pid:none) Cryptosporidium parvum isolate 11 ... 324 5e-87
CP000595_24(CP000595|pid:none) Ostreococcus lucimarinus CCE9901 ... 324 5e-87
X03282_1(X03282|pid:none) dictyostelium discoideum gene for acti... 324 5e-87
EF030518_1(EF030518|pid:none) Cryptosporidium sp. LPHN actin gen... 324 5e-87
EF206794_1(EF206794|pid:none) Oreochromis niloticus clone On3a8 ... 324 5e-87
D63852_1(D63852|pid:none) Cyanidium caldarium gene for actin, co... 324 5e-87
EF134084_1(EF134084|pid:none) Karlodinium micrum strain CCMP1975... 324 5e-87

>(O96621) RecName: Full=Actin-related protein 2; AltName:
Full=Actin-like protein 2; AltName: Full=Actin-related
protein B; &AC116963_50(AC116963|pid:none)
&AF095929_1(AF095929|pid:none)
Length = 392

Score = 751 bits (1940), Expect = 0.0
Identities = 377/392 (96%), Positives = 377/392 (96%)
Frame = +2

Query: 269 MDSNKVIVMDNGTGFVKCGFAGANFPTAIFPSMVGRPILRSEEKVENVEIKDIMVGDEAA 448
MDSNKVIVMDNGTGFVKCGFAGANFPTAIFPSMVGRPILRSEEKVENVEIKDIMVGDEAA
Sbjct: 1 MDSNKVIVMDNGTGFVKCGFAGANFPTAIFPSMVGRPILRSEEKVENVEIKDIMVGDEAA 60

Query: 449 KLRSMLQITYPLENGIIRNWDDITHVWDYALKEKLKVSDPTECKILLTEPPMNPVANRQK 628
KLRSMLQITYPLENGIIRNWDDITHVWDYALKEKLKVSDPTECKILLTEPPMNPVANRQK
Sbjct: 61 KLRSMLQITYPLENGIIRNWDDITHVWDYALKEKLKVSDPTECKILLTEPPMNPVANRQK 120

Query: 629 MIECMFEKYGFQAVYVAIQAVLTLYAQXXXXXXXXXXXXXXXHIIPVYEGYSIPHLTRRL 808
MIECMFEKYGFQAVYVAIQAVLTLYAQ HIIPVYEGYSIPHLTRRL
Sbjct: 121 MIECMFEKYGFQAVYVAIQAVLTLYAQGLLTGVVVDSGDGVTHIIPVYEGYSIPHLTRRL 180

Query: 809 DVAGRDVTRYLIKLLLLRGYAFNRTADFETIRQIKEKLCYVAYDVQQEMKLASETTVLVE 988
DVAGRDVTRYLIKLLLLRGYAFNRTADFETIRQIKEKLCYVAYDVQQEMKLASETTVLVE
Sbjct: 181 DVAGRDVTRYLIKLLLLRGYAFNRTADFETIRQIKEKLCYVAYDVQQEMKLASETTVLVE 240

Query: 989 NYTLPDGRVIKVGQERFQASEALFNPSLVDVEGGGVHEQLFDCITKADRDLQQGFYQHIV 1168
NYTLPDGRVIKVGQERFQASEALFNPSLVDVEGGGVHEQLFDCITKADRDLQQGFYQHIV
Sbjct: 241 NYTLPDGRVIKVGQERFQASEALFNPSLVDVEGGGVHEQLFDCITKADRDLQQGFYQHIV 300

Query: 1169 LSGGSSMYPGLPSRLEKEIRSLYLERVLKGNKEGLAKFKCRIEDPPRRKHMVFLGGAVLA 1348
LSGGSSMYPGLPSRLEKEIRSLYLERVLKGNKEGLAKFKCRIEDPPRRKHMVFLGGAVLA
Sbjct: 301 LSGGSSMYPGLPSRLEKEIRSLYLERVLKGNKEGLAKFKCRIEDPPRRKHMVFLGGAVLA 360

Query: 1349 DLTKDRDDFWITKAEYMEKGFGALDKLTKLSV 1444
DLTKDRDDFWITKAEYMEKGFGALDKLTKLSV
Sbjct: 361 DLTKDRDDFWITKAEYMEKGFGALDKLTKLSV 392

Lambda K H
0.318 0.134 0.401

Gapped
Lambda K H
0.267 0.0410 0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3236559
Number of Hits to DB: 2,632,662,198
Number of extensions: 55355556
Number of successful extensions: 155144
Number of sequences better than 10.0: 2589
Number of HSP's gapped: 150148
Number of HSP's successfully gapped: 2687
Length of query: 524
Length of database: 1,051,180,864
Length adjustment: 133
Effective length of query: 391
Effective length of database: 620,718,517
Effective search space: 242700940147
Effective search space used: 242700940147
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)

PSORT

psg: 0.73 gvh: 0.40 alm: 0.35 top: 0.53 tms: 0.00 mit: 0.21 mip: 0.00
nuc: 0.17 erl: 0.00 erm: 0.20 pox: 0.00 px2: 0.00 vac: 0.00 rnp: 0.00
act: 0.00 caa: 0.00 yqr: 0.00 tyr: 0.00 leu: 0.00 gpi: 0.00 myr: 0.00
dna: 0.00 rib: 0.00 bac: 0.00 m1a: 0.00 m1b: 0.00 m2 : 0.00 mNt: 0.00
m3a: 0.00 m3b: 0.00 m_ : 1.00

52.0 %: cytoplasmic
32.0 %: nuclear
8.0 %: mitochondrial
4.0 %: cytoskeletal
4.0 %: vacuolar

>> prediction for Contig-U14926-1 is cyt

VS (DIR, S) 0
VH (FL, L) 0
VF (FL, S) 12
AH (FL, L) 0
AF (FL, S) 21
SL (DIR, L) 6
SS (DIR, S) 1
SH (FL, L) 1
SF (FL, S) 6
CH (FL, L) 2
CF (FL, S) 4
FCL (DIR, L) 0
FC (DIR, S) 3
FC-IC (SUB) 0