>Contig-U02846-1 (Contig-U02846-1Q) /CSM_Contig/Contig-U02846-1Q.Seq.d
AATTTTTTTTTTTTTAATATATTTGCAAATATACAATTGTAAAGCAAATA
AATTTATTCCATCTTTTAAGAAATAATAATAATAATAATTAATAATTAAA
ATCATTTTTTAAAAATGGTAAAGGGAAATAATAATAATAAAAGAGGTAGC
AATAATAATAATAATAATAATAATAGTAATAATAAAAAAATTAGATAGAC
AAGTTAAAGCATCATTAAGAAAAAGAAAAGAGAGATTAAAACATGGTGAT
GAATCATGGAAAAGAGGTATAGTTAAATTTCAACAACAATTGGAACCATT
TGGATTTATAATTAAAGATGTTGCAGGCGATGGTAATTGTTTATTTAGAT
CAATTGCAGATCAATTACAAGATGCACCCAATGAACATAGGAAATATCGT
GAAGCAATTTGTAAATACATTGAAAAGAATAAAGACATGTTTGCACCATT
CATTGATGACGAAGAATTTGAATCATTCGAAGAGTACATTCAAGAGATGA
GAGAAGATGCAACATGGGGTGGTCATGTTGAAATTCAAGCAGCATCATTG
GCTTACAATGTAAATATTACTATACATCAAATGGACCAACCAAGATGGGA
AATCGTCAACCATTTCCCACCTGAAAAAAACAAAACTATTCATTTATCAT
ATCATAATGATGAACATTATAATTCTGTAAGACCTGCAAATCAATCATTA
TATCCAACAAAATCAACCAGTTCTTCACCAGTTCCAAATTTTGATAATAA
ACAAACTTTTCAACCTTCTTCAAAGGGTGGTAAGAATAATAATAATGGTA
AAAATAATGGTAAAAATAATGGTGGTGGTTCATTTGATTATAATAATAAT
AATGGTAGTAGTTCATTTGATTATAATAATAGTGGTGGTAATAGTGGAAA
TTTTATAGACGATTCAGTTTATGAAATTATGACATTAACAGGTGAAACGA
GTGTAAAAAATATAAAAGAAGCATTAATCGATTGTAATTATAATATAGAA
GCAGCTGTTGAATATTTACTTGCTTTATCATTAAGTAAAGATGATTCAGT
TGTTGAAAATAGCAGTAGTAATAATTTTGATGATAATAGTAGTGTAACTA
CTACTGATGAAAATGAAATTGATGAAAATAAAGATGATAATATAAATACT
ACCACTACGACAACAACTACCACTACAACTACCACCACTACTACAAGTAA
TAATAATAATAACAATGAAAAAGCTTCAAGAAATCCATATAAAGGTATTA
AAAAGAAAGAGAATGAAGAGAAAAAAGAAAATCAAGATGAAAGTAATGCA
CATTTAAGTAATAAACAAAGAAAAAATTTAAAACAACAACAAAATACAAA
ACCAAGGAGAGAAGTTCACCATATTGATAGAAAATCAATCGTTGACGACT
CTGTAGTCAATTTGGGTTCTCTAAATATTTAGAA

est1=AFJ459F,1,282
est2=CFE504F,16,403
est3=SSK512F,47,626
est4=CFE504Z,468,1067
est5=AFJ459Z,640,1420
est6=SSK512Z,724,1435

ifffliylqiynckankfipsfkk*****liikiif*kw*REIIIIKEVAIIIIIIIIVI
IKKLDRQVKASLRKRKERLKHGDESWKRGIVKFQQQLEPFGFIIKDVAGDGNCLFRSIAD
QLQDAPNEHRKYREAICKYIEKNKDMFAPFIDDEEFESFEEYIQEMREDATWGGHVEIQA
ASLAYNVNITIHQMDQPRWEIVNHFPPEKNKTIHLSYHNDEHYNSVRPANQSLYPTKSTS
SSPVPNFDNKQTFQPSSKGGKNNNNGKNNGKNNGGGSFDYNNNNGSSSFDYNNSGGNSGN
FIDDSVYEIMTLTGETSVKNIKEALIDCNYNIEAAVEYLLALSLSKDDSVVENSSSNNFD
DNSSVTTTDENEIDENKDDNINTTTTTTTTTTTTTTTTSNNNNNNEKASRNPYKGIKKKE
NEEKKENQDESNAHLSNKQRKNLKQQQNTKPRREVHHIDRKSIVDDSVVNLGSLNI*

Frame A:
nffffnifaniql*sk*iysif*eiiiiiinn*nhflkmvkgnnnnkrgsnnnnnnnnsn
nkkir*ts*siikkkkreiktw**imekrys*isttigtiwiyn*rccrrw*lfi*incr
sitrctq*t*eis*snl*ih*ke*rhvctih**rri*iirrvhsrderrcnmgwsc*nss
siiglqckyyytsngptkmgnrqpfpt*kkqnysfiis***tl*fcktcksiiisnkinq
fftsskf***tnfstffkgw*e***w*k*w*k*wwwfi*l****w**fi*l***ww**wk
fyrrfsl*nydinr*neckkykrsinrl*l*yrssc*iftcfiik*r*fsc*k*q***f*
****cnyy**k*n**k*r**ykyyhydnnyhynyhhyyk*****q*ksfkksi*ry*ker
e*rekrksr*k*ctfk**tkkkfktttkyktkersspy**kinr*rlcsqfgfskyle


Frame B:
ifffliylqiynckankfipsfkk*****liikiif*kw*REIIIIKEVAIIIIIIIIVI
IKKLDRQVKASLRKRKERLKHGDESWKRGIVKFQQQLEPFGFIIKDVAGDGNCLFRSIAD
QLQDAPNEHRKYREAICKYIEKNKDMFAPFIDDEEFESFEEYIQEMREDATWGGHVEIQA
ASLAYNVNITIHQMDQPRWEIVNHFPPEKNKTIHLSYHNDEHYNSVRPANQSLYPTKSTS
SSPVPNFDNKQTFQPSSKGGKNNNNGKNNGKNNGGGSFDYNNNNGSSSFDYNNSGGNSGN
FIDDSVYEIMTLTGETSVKNIKEALIDCNYNIEAAVEYLLALSLSKDDSVVENSSSNNFD
DNSSVTTTDENEIDENKDDNINTTTTTTTTTTTTTTTTSNNNNNNEKASRNPYKGIKKKE
NEEKKENQDESNAHLSNKQRKNLKQQQNTKPRREVHHIDRKSIVDDSVVNLGSLNI*


Frame C:
ffff*yickytivkqinlfhllrnnnnnn**lksffkngkgk****kr*q**********
*kn*idklkhh*ekekrd*nmvmnhgkev*lnfnnnwnhldl*lkmlqamvivyldqlqi
nykmhpmnignivkqfvntlkriktclhhslmtknlnhskstfkr*ekmqhgvvmlkfkq
hhwltm*illyikwtnqdgksstishlkktklfiyhiimmniiil*dlqinhyiqqnqpv
lhqfqiliinklfnllqrvvriiimvkimvkimvvvhliiiiimvvvhliiiivvvivei
l*tiqfmkl*h*qvkrv*ki*kkh*siviii*kqllniyllyh*vkmiqllkiavviilm
iivv*lllmkmklmkikmii*ilplrqqlplqlppllqviiiitmkklqeihikvlkrkr
mkrkkkikmkvmhi*vinkeki*nnnkiqnqgekftilienqslttl*siwvl*ifr

Query= Contig-U02846-1 (Contig-U02846-1Q)
/CSM_Contig/Contig-U02846-1Q.Seq.d
         (1434 letters)

Database: CSM
           6905 sequences; 5,674,871 total letters


                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

Contig-U02846-1 (Contig-U02846-1Q) /CSM_Contig/Conti...  1136  0.0
Contig-U11144-1 (Contig-U11144-1Q) /CSM_Contig/Conti...    50  7e-06
Contig-U05736-1 (Contig-U05736-1Q) /CSM_Contig/Conti...    44  4e-04
Contig-U12169-1 (Contig-U12169-1Q) /CSM_Contig/Conti...    42  0.002
Contig-U11485-1 (Contig-U11485-1Q) /CSM_Contig/Conti...    42  0.002
Contig-U11401-1 (Contig-U11401-1Q) /CSM_Contig/Conti...    42  0.002
Contig-U11262-1 (Contig-U11262-1Q) /CSM_Contig/Conti...    42  0.002
Contig-U09137-1 (Contig-U09137-1Q) /CSM_Contig/Conti...    42  0.002
Contig-U02735-1 (Contig-U02735-1Q) /CSM_Contig/Conti...    42  0.002
Contig-U02668-1 (Contig-U02668-1Q) /CSM_Contig/Conti...    42  0.002

>Contig-U02846-1 (Contig-U02846-1Q) /CSM_Contig/Contig-U02846-1Q.Seq.d
          Length = 1434

 Score = 1136 bits (573), Expect = 0.0
 Identities = 587/594 (98%)
 Strand = Plus / Plus

                                                                       
Query: 191 ttagatagacaagttaaagcatcattaagaaaaagaaaagagagattaaaacatggtgat 250
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 191 ttagatagacaagttaaagcatcattaagaaaaagaaaagagagattaaaacatggtgat 250

                                                                       
Query: 251 gaatcatggaaaagaggtatagttaaatttcaacaacaattggaaccatttggatttata 310
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 251 gaatcatggaaaagaggtatagttaaatttcaacaacaattggaaccatttggatttata 310

                                                                       
Query: 311 attaaagatgttgcaggcgatggtaattgtttatttagatcaattgcagatcaattacaa 370
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 311 attaaagatgttgcaggcgatggtaattgtttatttagatcaattgcagatcaattacaa 370

                                                                       
Query: 371 gatgcacccaatgaacataggaaatatcgtgaagcaatttgtaaatacattgaaaagaat 430
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 371 gatgcacccaatgaacataggaaatatcgtgaagcaatttgtaaatacattgaaaagaat 430

                                                                       
Query: 431 aaagacatgtttgcaccattcattgatgacgaagaatttgaatcattcgaagagtacatt 490
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 431 aaagacatgtttgcaccattcattgatgacgaagaatttgaatcattcgaagagtacatt 490

                                                                       
Query: 491 caagagatgagagaagatgcaacatggggtggtcatgttgaaattcaagcagcatcattg 550
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 491 caagagatgagagaagatgcaacatggggtggtcatgttgaaattcaagcagcatcattg 550

                                                                       
Query: 551 gcttacaatgtaaatattactatacatcaaatggaccaaccaagatgggaaatcgtcaac 610
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 551 gcttacaatgtaaatattactatacatcaaatggaccaaccaagatgggaaatcgtcaac 610

                                                                       
Query: 611 catttcccacctgnnnnnnncaaaactattcatttatcatatcataatgatgaacattat 670
           |||||||||||||       ||||||||||||||||||||||||||||||||||||||||
Sbjct: 611 catttcccacctgaaaaaaacaaaactattcatttatcatatcataatgatgaacattat 670

                                                                       
Query: 671 aattctgtaagacctgcaaatcaatcattatatccaacaaaatcaaccagttcttcacca 730
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 671 aattctgtaagacctgcaaatcaatcattatatccaacaaaatcaaccagttcttcacca 730

                                                                 
Query: 731 gttccaaattttgataataaacaaacttttcaaccttcttcaaagggtggtaag 784
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 731 gttccaaattttgataataaacaaacttttcaaccttcttcaaagggtggtaag 784


 Score =  577 bits (291), Expect = e-164
 Identities = 291/291 (100%)
 Strand = Plus / Plus

                                                                        
Query: 854  ggtagtagttcatttgattataataatagtggtggtaatagtggaaattttatagacgat 913
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 854  ggtagtagttcatttgattataataatagtggtggtaatagtggaaattttatagacgat 913

                                                                        
Query: 914  tcagtttatgaaattatgacattaacaggtgaaacgagtgtaaaaaatataaaagaagca 973
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 914  tcagtttatgaaattatgacattaacaggtgaaacgagtgtaaaaaatataaaagaagca 973

                                                                        
Query: 974  ttaatcgattgtaattataatatagaagcagctgttgaatatttacttgctttatcatta 1033
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 974  ttaatcgattgtaattataatatagaagcagctgttgaatatttacttgctttatcatta 1033

                                                                        
Query: 1034 agtaaagatgattcagttgttgaaaatagcagtagtaataattttgatgataatagtagt 1093
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1034 agtaaagatgattcagttgttgaaaatagcagtagtaataattttgatgataatagtagt 1093

                                                               
Query: 1094 gtaactactactgatgaaaatgaaattgatgaaaataaagatgataatata 1144
            |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1094 gtaactactactgatgaaaatgaaattgatgaaaataaagatgataatata 1144


 Score =  163 bits (82), Expect = 7e-40
 Identities = 82/82 (100%)
 Strand = Plus / Plus

                                                                        
Query: 1353 caaggagagaagttcaccatattgatagaaaatcaatcgttgacgactctgtagtcaatt 1412
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1353 caaggagagaagttcaccatattgatagaaaatcaatcgttgacgactctgtagtcaatt 1412

                                  
Query: 1413 tgggttctctaaatatttagaa 1434
            ||||||||||||||||||||||
Sbjct: 1413 tgggttctctaaatatttagaa 1434


 Score =  111 bits (56), Expect = 2e-24
 Identities = 56/56 (100%)
 Strand = Plus / Plus

                                                                  
Query: 16 aatatatttgcaaatatacaattgtaaagcaaataaatttattccatcttttaaga 71
          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16 aatatatttgcaaatatacaattgtaaagcaaataaatttattccatcttttaaga 71


 Score =  103 bits (52), Expect = 5e-22
 Identities = 52/52 (100%)
 Strand = Plus / Plus

                                                                
Query: 1197 gtaataataataataacaatgaaaaagcttcaagaaatccatataaaggtat 1248
            ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1197 gtaataataataataacaatgaaaaagcttcaagaaatccatataaaggtat 1248


 Score = 42.1 bits (21), Expect = 0.002
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 861 gttcatttgattataataata 881
           |||||||||||||||||||||
Sbjct: 828 gttcatttgattataataata 848


 Score = 32.2 bits (16), Expect = 1.6
 Identities = 16/16 (100%)
 Strand = Plus / Minus

                          
Query: 18 tatatttgcaaatata 33
          ||||||||||||||||
Sbjct: 33 tatatttgcaaatata 18


 Score = 30.2 bits (15), Expect = 6.3
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                           
Query: 1198 taataataataataa 1212
            |||||||||||||||
Sbjct: 159  taataataataataa 173


 Score = 30.2 bits (15), Expect = 6.3
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                           
Query: 1198 taataataataataa 1212
            |||||||||||||||
Sbjct: 156  taataataataataa 170


 Score = 30.2 bits (15), Expect = 6.3
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                           
Query: 1198 taataataataataa 1212
            |||||||||||||||
Sbjct: 74   taataataataataa 88


 Score = 30.2 bits (15), Expect = 6.3
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                           
Query: 1198 taataataataataa 1212
            |||||||||||||||
Sbjct: 153  taataataataataa 167


>Contig-U11144-1 (Contig-U11144-1Q) /CSM_Contig/Contig-U11144-1Q.Seq.d
          Length = 2668

 Score = 50.1 bits (25), Expect = 7e-06
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                     
Query: 1197 gtaataataataataacaatgaaaa 1221
            |||||||||||||||||||||||||
Sbjct: 213  gtaataataataataacaatgaaaa 237


 Score = 34.2 bits (17), Expect = 0.40
 Identities = 17/17 (100%)
 Strand = Plus / Plus

                             
Query: 1122 atgaaaataaagatgat 1138
            |||||||||||||||||
Sbjct: 351  atgaaaataaagatgat 367


 Score = 32.2 bits (16), Expect = 1.6
 Identities = 22/24 (91%)
 Strand = Plus / Plus

                                    
Query: 1198 taataataataataacaatgaaaa 1221
            ||||||||||||||| ||| ||||
Sbjct: 454  taataataataataataatcaaaa 477


 Score = 32.2 bits (16), Expect = 1.6
 Identities = 22/24 (91%)
 Strand = Plus / Plus

                                    
Query: 1198 taataataataataacaatgaaaa 1221
            ||||||||||||||| ||| ||||
Sbjct: 409  taataataataataataatcaaaa 432


 Score = 30.2 bits (15), Expect = 6.3
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                           
Query: 1198 taataataataataa 1212
            |||||||||||||||
Sbjct: 451  taataataataataa 465


>Contig-U05736-1 (Contig-U05736-1Q) /CSM_Contig/Contig-U05736-1Q.Seq.d
          Length = 1102

 Score = 44.1 bits (22), Expect = 4e-04
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                      
Query: 1198 taataataataataacaatgaaaaag 1223
            ||||||||||||||| ||||||||||
Sbjct: 682  taataataataataataatgaaaaag 707


  Database: CSM
    Posted date:  Jun 9, 2004  7:35 PM
  Number of letters in database: 5,674,871
  Number of sequences in database:  6905
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 36,694
Number of Sequences: 6905
Number of extensions: 36694
Number of successful extensions: 12322
Number of sequences better than 10.0: 1649
length of query: 1434
length of database: 5,674,871
effective HSP length: 16
effective length of query: 1418
effective length of database: 5,564,391
effective search space: 7890306438
effective search space used: 7890306438
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 15 (30.2 bits)

Query= Contig-U02846-1 (Contig-U02846-1Q) /CSM_Contig/Contig-U02846-1Q.Seq.d
         (1434 letters)

Database: ddbj_A
           102,105,510 sequences; 101,790,757,118 total letters

Searching..................................................done

                                                             Score    E
Sequences producing significant alignments:                  (bits) Value  N

(BJ371869) Dictyostelium discoideum cDNA clone:ddc10g01, 3' ...   392   0.0    3
(BJ344506) Dictyostelium discoideum cDNA clone:dda19f16, 3' ...   575   0.0    4
(C94186) Dictyostelium discoideum slug cDNA, clone SSK512.        575   0.0    4
(BJ358544) Dictyostelium discoideum cDNA clone:ddc10g01, 5' ...   321   e-108  2
(BJ327195) Dictyostelium discoideum cDNA clone:dda19f16, 5' ...    86   1e-25  2
(AU074370) Dictyostelium discoideum slug cDNA, clone SSK512.       92   5e-21  2
(AE014821) Plasmodium falciparum 3D7 chromosome 14 section 6...    52   7e-05  9
(M59474) Plasmodium falciparum asparagine-rich antigen Pfa35...    40   0.002  4
(AJ585374) Dictyostelium discoideum phg2 mRNA for Phagocytos...    38   0.002  3
(AL844509) Plasmodium falciparum chromosome 13.                    38   0.010  10
(AM236321) Ascaris suum partial mRNA for 227 kDa spindle- an...    42   0.041  3
(AL844506) Plasmodium falciparum chromosome  7.                    42   0.070  6
(AE014819) Plasmodium falciparum 3D7 chromosome 14 section 4...    38   0.073  8
(BJ375928) Dictyostelium discoideum cDNA clone:ddc20f15, 3' ...    40   0.073  2
(AL049181) Plasmodium falciparum DNA *** SEQUENCING IN PROGR...    40   0.074  10
(AL844501) Plasmodium falciparum strain 3D7, chromosome 1.         40   0.083  7
(AE014832) Plasmodium falciparum 3D7 chromosome 10 section 4...    38   0.085  8
(CI998686) Marsupenaeus japonicus cDNA, clone:YAQ02A01NGRM00...    34   0.095  3
(AM473415) Vitis vinifera contig VV78X028443.3, whole genome...    34   0.099  3
(AU263023) Dictyostelium discoideum vegetative cDNA clone:VS...    38   0.13   2
(CR382398) Plasmodium falciparum chromosome 6, complete sequ...    38   0.13   7
(AY232271) Dictyostelium discoideum putative protein Roco9 (...    40   0.14   3
(AC116986) Dictyostelium discoideum chromosome 2 map 2234041...    38   0.16   4
(AF362375) Dictyostelium discoideum histidine kinase DhkE (d...    38   0.19   5
(CR760666) Xenopus tropicalis finished cDNA, clone TEgg091l04.     50   0.24   1
(BC160493) Xenopus tropicalis BMS1 homolog, ribosome assembl...    50   0.24   1
(AC011231) Homo sapiens BAC clone RP11-13K3 from 2, complete...    50   0.24   1
(CR857217) Pongo abelii mRNA; cDNA DKFZp469H1622 (from clone...    50   0.24   1
(AY401239) Pan troglodytes HCM0824 gene, VIRTUAL TRANSCRIPT,...    50   0.24   1
(ER427789) 1092963762642 Global-Ocean-Sampling_GS-35-01-01-1...    50   0.24   1
(AM654593) Entamoeba moshkovskii FIC GSS, clone mosh015e06.q1k.    50   0.24   1
(EJ313882) 1095403254355 Global-Ocean-Sampling_GS-27-01-01-1...    50   0.24   1
(EJ123451) 1092343384102 Global-Ocean-Sampling_GS-27-01-01-1...    50   0.24   1
(EL818600) CBWN3908.g1 NICHD_XGC_tropTe1 Xenopus (Silurana) ...    50   0.24   1
(EE488252) SD7MrF11 YG/PR Prunus cerasus cDNA, mRNA sequence.      50   0.24   1
(DC187826) Xenopus (Silurana) tropicalis NBRP cDNA clone: st...    50   0.24   1
(DC157682) Xenopus (Silurana) tropicalis NBRP cDNA clone: rs...    50   0.24   1
(CX495710) JGI_XZG37758.rev NIH_XGC_tropGas7 Xenopus (Silura...    50   0.24   1
(CX477683) JGI_XZG20800.rev NIH_XGC_tropGas7 Xenopus (Silura...    50   0.24   1
(CX441630) JGI_XZG60685.rev NIH_XGC_tropGas7 Xenopus (Silura...    50   0.24   1
(CX427819) JGI_XZG18397.rev NIH_XGC_tropGas7 Xenopus (Silura...    50   0.24   1
(CX369181) JGI_XZT54928.rev NIH_XGC_tropTad5 Xenopus (Silura...    50   0.24   1
(CR411180) Xenopus tropicalis EST, clone TTbA028b01 3'.            50   0.24   1
(AL844507) Plasmodium falciparum chromosome 8.                     38   0.25   7
(AC116956) Dictyostelium discoideum chromosome 2 map 1418423...    38   0.25   3
(BJ364369) Dictyostelium discoideum cDNA clone:ddc31p12, 5' ...    38   0.26   2
(AU270275) Dictyostelium discoideum vegetative cDNA clone:VS...    38   0.26   2
(AM661799) Entamoeba moshkovskii FIC GSS, clone mosh114g07.q1k.    34   0.27   3
(EL503883) A10_2526_302.AB1 Blood stage Plasmodium falciparu...    44   0.28   2
(GE408185) 293802092 Nasonia vitripennis Female Pupae Nasoni...    38   0.28   2
(EL502276) B08_PFLAB1-LARGE-PLATE13B.AB1 Blood stage Plasmod...    44   0.30   2
(AL929353) Plasmodium falciparum strain 3D7, chromosome 5, s...    38   0.30   9
(AC007051) Homo sapiens chromosome 3, clone hRPK.44_A_1, com...    40   0.32   4
(EL416144) CHCL4764.b1_H15.ab1 CHC(LMS) Texas blueweed Helia...    42   0.32   2
(AC176190) Strongylocentrotus purpuratus clone R3-3063P22, W...    38   0.34   6
(AU071298) Dictyostelium discoideum slug cDNA, clone SSB183.       40   0.36   2
(FM992690) Candida dubliniensis CD36 chromosome 3, complete ...    40   0.39   7
(AC007919) Homo sapiens 3 BAC RP11-408H1 (Roswell Park Cance...    40   0.41   4
(CR759876) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS...    38   0.43   5
(AC116979) Dictyostelium discoideum chromosome 2 map 6445720...    34   0.43   5
(AU261867) Dictyostelium discoideum vegetative cDNA clone:VS...    38   0.45   3
(AF102575) Dictyostelium discoideum cell surface protein DTF...    38   0.45   3
(CR354546) Zebrafish DNA sequence *** SEQUENCING CANCELLED *...    38   0.47   8
(AC005506) Plasmodium falciparum chromosome 12 clone PFYAC35...    34   0.50   11
(AC116984) Dictyostelium discoideum chromosome 2 map 2567470...    42   0.53   4
(AC116305) Dictyostelium discoideum chromosome 2 map 1005175...    40   0.53   3
(AC182709) Populus trichocarpa clone Pop1-85D11, complete se...    42   0.61   7
(AE014845) Plasmodium falciparum 3D7 chromosome 12, section ...    38   0.61   8
(EL502447) C05_PFLAB1-LARGE-PLATE6B.AB1 Blood stage Plasmodi...    38   0.71   3
(AF362369) Dictyostelium discoideum histidine kinase DhkG (d...    38   0.75   3
(EH011577) USDA-FP_184563 Lysiphlebus testaceipes adult whol...    38   0.77   2
(FE243229) CAPG7545.fwd CAPG Naegleria gruberi amoeba stage ...    34   0.77   3
(BG936921) jh_30301.z1 Penaeus chinensis' cephalothorax cDNA...    38   0.83   2
(AE014844) Plasmodium falciparum 3D7 chromosome 12, section ...    38   0.84   12
(AC206146) Saccoglossus kowalevskii clone CUGI_SK_BA 001A8, ...    38   0.84   4
(DY660416) SA_MF_06_E08 SA_MF Senecio aethnensis cDNA 5', mR...    48   0.95   1
(DY658851) SV_CP_06_A09 SV_CP Senecio vulgaris subsp. vulgar...    48   0.95   1
(CT901618) Phaeodactylum tricornutum 5-PRIME EST from clone ...    48   0.95   1
(FG331735) gmnlla_0019g17.sp6 Gadus morhua larvae library Ga...    48   0.95   1
(EL505146) F05_1991_1.AB1 Blood stage Plasmodium falciparum ...    32   0.96   3
(FF288881) pgsP0022F18 Solea senegalensis Mix of cDNA librar...    36   0.97   2
(AC109471) Homo sapiens chromosome 5 clone RP11-395P13, comp...    40   1.00   4
(EH014545) USDA-FP_187235 Lysiphlebus testaceipes adult whol...    38   1.0    2
(ES599305) BPE00000374 Buddenbrockia plumatellae SMART cDNA ...    38   1.1    2
(ED093004) AUAC-aah30c01.g1 Ascaris suum whole genome shotgu...    38   1.2    2
(ED303198) AUAC-aap18d10.b1 Ascaris suum whole genome shotgu...    38   1.2    2
(ED284499) AUAC-aap22e08.g1 Ascaris suum whole genome shotgu...    38   1.3    2
(FE043881) HA_MX2_72b08_SP6 Lobster Multiple Tissues, Normal...    40   1.3    2
(AC116960) Dictyostelium discoideum chromosome 2 map complem...    38   1.3    4
(AF063866) Melanoplus sanguinipes entomopoxvirus, complete g...    34   1.3    11
(AC116977) Dictyostelium discoideum chromosome 2 map 5515173...    42   1.3    2
(CR382401) Plasmodium falciparum chromosome 6, complete sequ...    38   1.4    5
(AE014830) Plasmodium falciparum 3D7 chromosome 10 section 2...    38   1.6    10
(AE001370) Plasmodium falciparum 3D7 chromosome 2 section 7 ...    38   1.6    3
(AC094242) Rattus norvegicus clone CH230-3F19, *** SEQUENCIN...    38   1.8    6
(CT025861) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS...    38   1.8    5
(AC201348) Strongylocentrotus purpuratus clone R3-17A16, WOR...    40   1.9    5
(EL501158) 060_PFLAB1-S-PLATE6B.AB1 Blood stage Plasmodium f...    32   2.1    3
(DQ342053) Dictyostelium discoideum STIP mRNA, complete cds.       38   2.1    3
(EL504051) B05_2638_1.AB1 Blood stage Plasmodium falciparum ...    36   2.1    3
(AE014842) Plasmodium falciparum 3D7 chromosome 11 section 7...    38   2.2    11
(AF362371) Dictyostelium discoideum histidine kinase DhkI (d...    38   2.3    3
(AC117073) Dictyostelium discoideum chromosome 2 map 6045872...    38   2.4    5
(AC006281) Plasmodium falciparum chromosome 12 clone PFYACB8...    38   2.4    7
(CV696607) SJS_026_43.T3 SJS Schistosoma japonicum cDNA, mRN...    32   2.5    2
(CT635233) Danio rerio EST, clone ZF_mu_104k12 3'.                 42   2.5    2
(AE014837) Plasmodium falciparum 3D7 chromosome 11 section 2...    44   2.6    7
(EL927083) NY4Tr1_5_C11.g1_A039 NY4 trophonts (NY4Tr1) Ichth...    40   2.6    2
(AY254473) Dictyostelium discoideum nucleotide exchange fact...    38   2.7    3
(EG325133) EST_1074 Caste=Queen, Stage=Adult Vespula squamos...    28   2.7    4
(ER452122) 1092963853906 Global-Ocean-Sampling_GS-35-01-01-1...    42   2.8    2
(L18785) Plasmodium falciparum DNA polymerase alpha gene, co...    36   2.8    3
(AU088436) Plasmodium falciparum 3D7 cDNA clone from Sugano ...    38   2.8    2
(CR812467) Zebrafish DNA sequence *** SEQUENCING CANCELLED *...    38   2.8    7
(AC115592) Dictyostelium discoideum chromosome 2 map 1-12595...    38   2.9    3
(AC174103) Strongylocentrotus purpuratus clone R3-1031I12, W...    36   3.1    6
(AL929354) Plasmodium falciparum strain 3D7, chromosome 5, s...    38   3.1    7
(AL008970) Plasmodium falciparum MAL3P4.                           36   3.2    6
(FE230868) CAPG10027.fwd CAPG Naegleria gruberi amoeba stage...    38   3.4    2
(DC226458) Plasmodium berghei strain ANKA cDNA clone:SG00587...    42   3.5    2
(DC208860) Plasmodium berghei strain ANKA cDNA clone:MG00921...    42   3.6    2
(AC005504) Plasmodium falciparum chromosome 12, *** SEQUENCI...    30   3.6    9
(CT509124) A BAC library has been constructed from cultivar ...    38   3.7    3
(BC125750) Xenopus tropicalis cDNA clone IMAGE:7683058.            46   3.7    1
(AC149162) Xenopus (Silurana) tropicalis clone ISB-362P17, c...    46   3.7    1
(CT030654) Mouse DNA sequence from clone RP23-332G16 on chro...    46   3.7    1
(CS601773) Sequence 759 from Patent WO2007039234.                  46   3.7    1
(AL121957) Human DNA sequence from clone RP1-67A8 on chromos...    46   3.7    1
(ER569738) 1093015787223 Global-Ocean-Sampling_GS-36-01-01-2...    46   3.7    1
(EJ867833) 1093018291611 Global-Ocean-Sampling_GS-30-02-01-1...    46   3.7    1
(EJ863957) 1093018242054 Global-Ocean-Sampling_GS-30-02-01-1...    46   3.7    1
(EJ219465) 1092351191688 Global-Ocean-Sampling_GS-27-01-01-1...    46   3.7    1
(EJ135128) 1092343594392 Global-Ocean-Sampling_GS-27-01-01-1...    46   3.7    1
(EL352962) CCEL9592.b1_P22.ab1 CCE(LMS) endive Cichorium end...    46   3.7    1
(CX903136) JGI_CAAM14114.fwd NIH_XGC_tropTe3 Xenopus (Silura...    46   3.7    1
(CX890183) JGI_CAAM3042.fwd NIH_XGC_tropTe3 Xenopus (Siluran...    46   3.7    1
(CX360565) JGI_XZT1388.rev NIH_XGC_tropTad5 Xenopus (Siluran...    46   3.7    1
(CU418341) Pleurobrachia pileus 5-PRIME EST from clone SQ0AA...    46   3.7    1
(CT847708) Oryza sativa Indica Group EST sequence:OSIGCRN104...    46   3.7    1
(CP000903) Bacillus weihenstephanensis KBAB4, complete genome.     46   3.7    1
(CP000560) Bacillus amyloliquefaciens FZB42, complete genome.      46   3.7    1
(ED160091) AUAC-aam96c01.g1 Ascaris suum whole genome shotgu...    42   3.8    2
(EY361097) CAWZ7535.rev CAWZ Helobdella robusta Primary Late...    38   3.9    2
(EL502119) A11_PFLAB1-M-PLATE20BR.AB1 Blood stage Plasmodium...    38   3.9    2
(AQ647589) RPCI93-DpnII-29N12.TV RPCI93-DpnII Trypanosoma br...    40   4.0    2
(AC182060) Bos taurus clone CH240-481E7, WORKING DRAFT SEQUE...    38   4.1    4
(AC117176) Dictyostelium discoideum chromosome 2 map 5018074...    38   4.1    4
(ER462033) 1092963899423 Global-Ocean-Sampling_GS-35-01-01-1...    42   4.2    2
(CT613879) Danio rerio EST, clone ZF_mu_37e12 5'.                  38   4.2    2
(AC176252) Strongylocentrotus purpuratus clone R3-3060I22, W...    34   4.4    6
(EC853066) HDE00004193 Hyperamoeba dachnaya Non-normalized (...    36   4.4    2
(ED427314) AUAC-aaf92b03.b1 Ascaris suum whole genome shotgu...    42   4.5    2
(DY885613) CeleSEQ925 Cunninghamella elegans pBluescript (Ec...    40   4.8    2
(AM426584) Vitis vinifera contig VV78X188817.7, whole genome...    40   4.8    2
(EJ134612) 1092343590548 Global-Ocean-Sampling_GS-27-01-01-1...    40   4.8    2
(ER421175) 1092963704869 Global-Ocean-Sampling_GS-35-01-01-1...    42   4.9    2
(AU073824) Dictyostelium discoideum slug cDNA, clone SSI452.       38   5.1    2
(AF362370) Dictyostelium discoideum histidine kinase DhkH (d...    38   5.1    2
(AY484462) Dictyostelium discoideum kinesin family member 8 ...    36   5.2    4
(BI815591) PfESToaa30d07.y1 Plasmodium falciparum 3D7 asexua...    34   5.2    3
(AC117081) Dictyostelium discoideum chromosome 2 map 5862124...    38   5.4    3
(EK174899) 1095458093499 Global-Ocean-Sampling_GS-31-01-01-1...    40   5.4    2
(CE535127) tigr-gss-dog-17000365910601 Dog Library Canis lup...    38   5.6    3
(CC633024) OGQAP53TV ZM_0.7_1.5_KB Zea mays genomic clone ZM...    30   5.7    4
(AC180295) Strongylocentrotus purpuratus clone R3-3119I17, W...    38   6.0    6
(EL499141) PFLAB1-S_F3_-P12A_A05_01.AB1 Blood stage Plasmodi...    34   6.1    2
(C91319) Dictyostelium discoideum slug cDNA, clone SSK294.         38   6.2    2
(CS468878) Sequence 69 from Patent EP1748080.                      34   6.8    2
(CS468877) Sequence 68 from Patent EP1748080.                      34   6.8    2
(CS419355) Sequence 69 from Patent WO2006094836.                   34   6.8    2
(CS419354) Sequence 68 from Patent WO2006094836.                   34   6.8    2
(AC216416) Populus trichocarpa clone POP048-M18, complete se...    32   6.9    2
(AC018615) Homo sapiens chromosome 2 clone RP11-129K3 map 2,...    34   7.0    2
(AC117080) Dictyostelium discoideum chromosome 2 map complem...    38   7.0    4
(AC007279) Homo sapiens BAC clone RP11-309N8 from 2, complet...    34   7.0    2
(AC181675) Strongylocentrotus purpuratus clone R3-3020A17, W...    34   7.1    2
(AC176589) Strongylocentrotus purpuratus clone R3-3077K21, W...    36   7.2    6
(DW282483) UI-S-HH0-adj-j-11-0-UI.s1 UI-S-HH0 Euprymna scolo...    30   7.2    4
(BJ345369) Dictyostelium discoideum cDNA clone:dda23a16, 3' ...    38   7.5    2
(FM992695) Candida dubliniensis CD36 chromosome R, complete ...    40   7.5    7
(CE612500) tigr-gss-dog-17000313546794 Dog Library Canis lup...    38   7.5    3
(AC179740) Strongylocentrotus purpuratus clone R3-1018H24, W...    44   7.6    8
(AL929356) Plasmodium falciparum strain 3D7, chromosome 9; s...    34   7.7    8
(AC131247) Strongylocentrotus purpuratus clone Sp114N15, ***...    40   7.7    5
(AF482389) Dictyostelium discoideum ABC transporter AbcG10 (...    34   7.9    3
(AU062021) Dictyostelium discoideum slug cDNA, clone SLH238.       36   8.0    2
(AC115612) Dictyostelium discoideum chromosome 2 map 6245135...    38   8.1    3
(CE771171) tigr-gss-dog-17000371059942 Dog Library Canis lup...    38   8.2    3
(DW176941) m3k05up.r1 Fiddler crab 4 day blastema cDNA libra...    40   8.2    2
(AC115599) Dictyostelium discoideum chromosome 2 map 4229098...    38   8.2    2
(CE621296) tigr-gss-dog-17000313631654 Dog Library Canis lup...    38   8.3    3
(CE559738) tigr-gss-dog-17000312682708 Dog Library Canis lup...    38   8.4    3
(CT997812) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS...    38   8.4    2
(ED293824) AUAC-aaa52h05.g1 Ascaris suum whole genome shotgu...    38   8.5    2
(AE014840) Plasmodium falciparum 3D7 chromosome 11 section 5...    38   8.6    9
(AE014839) Plasmodium falciparum 3D7 chromosome 11 section 4...    36   8.6    9
(AE014849) Plasmodium falciparum 3D7 chromosome 12, section ...    38   8.6    9
(AC157604) Ornithorhynchus anatinus chromosome UNK clone OAB...    40   8.9    2
(U42597) Dictyostelium discoideum histidine kinase A (dhkA) ...    38   8.9    3
(EA356980) Sequence 29 from patent US 7288385.                     38   9.0    3
(EA356961) Sequence 9 from patent US 7288385.                      38   9.0    3
(U58726) Caenorhabditis elegans cosmid T01C8, complete seque...    38   9.0    2
(AC213160) Populus trichocarpa clone POP105-D13, complete se...    32   9.3    7
(FE114372) LV_HC_RA060A08f Litopenaeus vannamei hemocyte cDN...    32   9.4    2
(FE114371) LV_HC_RA060O06r Litopenaeus vannamei hemocyte cDN...    32   9.4    2
(AL929359) Plasmodium falciparum strain 3D7, chromosome 9; s...    34   9.4    10
(FG811717) UCRVU04_CCNI12254_g1 Cowpea 524B Mixed Tissue and...    36   9.5    2
(FG811716) UCRVU04_CCNI12254_b1 Cowpea 524B Mixed Tissue and...    36   9.5    2
(FE098420) LV_HC_RA016G01r Litopenaeus vannamei hemocyte cDN...    38   9.5    3
(DE230003) Trifolium pratense DNA, clone:RCG23270.                 38   9.6    2
(AC216684) Populus trichocarpa clone POP030-A02, complete se...    36   9.6    7
(AC181614) Strongylocentrotus purpuratus clone R3-1106O17, W...    34   9.7    5

>(BJ371869) Dictyostelium discoideum cDNA clone:ddc10g01, 3' end,
            single read.
          Length = 599

 Score =  392 bits (198), Expect(3) = 0.0
 Identities = 198/198 (100%)
 Strand = Plus / Minus


Query: 857  agtagttcatttgattataataatagtggtggtaatagtggaaattttatagacgattca 916
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 210  agtagttcatttgattataataatagtggtggtaatagtggaaattttatagacgattca 151


Query: 917  gtttatgaaattatgacattaacaggtgaaacgagtgtaaaaaatataaaagaagcatta 976
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 150  gtttatgaaattatgacattaacaggtgaaacgagtgtaaaaaatataaaagaagcatta 91


Query: 977  atcgattgtaattataatatagaagcagctgttgaatatttacttgctttatcattaagt 1036
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 90   atcgattgtaattataatatagaagcagctgttgaatatttacttgctttatcattaagt 31


Query: 1037 aaagatgattcagttgtt 1054
            ||||||||||||||||||
Sbjct: 30   aaagatgattcagttgtt 13

 Score =  309 bits (156), Expect(3) = 0.0
 Identities = 156/156 (100%)
 Strand = Plus / Minus


Query: 468 ttgaatcattcgaagagtacattcaagagatgagagaagatgcaacatggggtggtcatg 527
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 599 ttgaatcattcgaagagtacattcaagagatgagagaagatgcaacatggggtggtcatg 540


Query: 528 ttgaaattcaagcagcatcattggcttacaatgtaaatattactatacatcaaatggacc 587
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 539 ttgaaattcaagcagcatcattggcttacaatgtaaatattactatacatcaaatggacc 480


Query: 588 aaccaagatgggaaatcgtcaaccatttcccacctg 623
           ||||||||||||||||||||||||||||||||||||
Sbjct: 479 aaccaagatgggaaatcgtcaaccatttcccacctg 444

 Score =  274 bits (138), Expect(3) = 0.0
 Identities = 143/145 (98%)
 Strand = Plus / Minus


Query: 631 caaaactattcatttatcatatcataatgatgaacattataattctgtaagacctgcaaa 690
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 436 caaaactattcatttatcatatcataatgatgaacattataattctgtaagacctgcaaa 377


Query: 691 tcaatcattatatccaacaaaatcaaccagttcttcaccagttccaaattttgataataa 750
           ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||
Sbjct: 376 tcaatcattatatccaacanaatcaaccagttcttcaccagttccaaattttgataaaaa 317


Query: 751 acaaacttttcaaccttcttcaaag 775
           |||||||||||||||||||||||||
Sbjct: 316 acaaacttttcaaccttcttcaaag 292

Lambda     K      H
    1.37    0.711     1.31

Matrix: blastn matrix:1 -3
Number of Sequences: 102105510
Number of Hits to DB: 1,368,052,785
Number of extensions: 92584634
Number of successful extensions: 10986665
Number of sequences better than 10.0: 214
Length of query: 1434
Length of database: 101,790,757,118
Length adjustment: 24
Effective length of query: 1410
Effective length of database: 99,340,224,878
Effective search space: 140069717077980
Effective search space used: 140069717077980
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)

Query= Contig-U02846-1 (Contig-U02846-1Q) /CSM_Contig/Contig-U02846-1Q.Seq.d
         (1434 letters)

Database: nrp_B
           3,236,559 sequences; 1,051,180,864 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL732356_2(AL732356|pid:none) Oryza sativa genomic DNA, chromoso...   137   1e-30
AL606619_32(AL606619|pid:none) Oryza sativa genomic DNA, chromos...   135   3e-30
BT000435_1(BT000435|pid:none) Arabidopsis thaliana putative prot...   131   7e-29
CP001332_292(CP001332|pid:none) Micromonas sp. RCC299 chromosome...   117   1e-24
AP008210_2225(AP008210|pid:none) Oryza sativa (japonica cultivar...   110   1e-22
AM458214_2(AM458214|pid:none) Vitis vinifera contig VV78X073587....   101   6e-20
CP000589_333(CP000589|pid:none) Ostreococcus lucimarinus CCE9901...    99   5e-19
AL929473_1(AL929473|pid:none) Mouse DNA sequence from clone RP23...    97   1e-18
AM910988_159(AM910988|pid:none) Plasmodium knowlesi strain H chr...    95   6e-18
BC087451_1(BC087451|pid:none) Xenopus laevis hypothetical LOC496...    94   9e-18
AB007928_1(AB007928|pid:none) Homo sapiens mRNA for KIAA0459 pro...    94   9e-18
(Q5T2D3) RecName: Full=OTU domain-containing protein 3;  &AB3853...    94   9e-18
AC116977_78(AC116977|pid:none) Dictyostelium discoideum chromoso...    90   2e-16
AK221616_1(AK221616|pid:none) Arabidopsis thaliana mRNA for hypo...    81   8e-14
AF229642_1(AF229642|pid:none) Mus musculus DXImx46e protein (DXI...    79   3e-13
(Q6GL44) OTU domain-containing protein 5.  &BC074667_1(BC074667|...    78   7e-13
(Q640H3) OTU domain-containing protein 5-B.  &BC082654_1(BC08265...    78   7e-13
BT083745_1(BT083745|pid:none) Zea mays full-length cDNA clone ZM...    78   7e-13
EU960748_1(EU960748|pid:none) Zea mays clone 228240 cysteine-typ...    78   7e-13
(Q7ZX21) OTU domain-containing protein 5-A.  &BC046254_1(BC04625...    78   9e-13
(Q3U2S4) RecName: Full=OTU domain-containing protein 5;         ...    78   9e-13
AX405810_1(AX405810|pid:none) Sequence 225 from Patent WO0222660.      78   9e-13
AL671978_5(AL671978|pid:none) Mouse DNA sequence from clone RP23...    78   9e-13
(Q2YDU3) RecName: Full=OTU domain-containing protein 5;         ...    78   9e-13
AL671978_2(AL671978|pid:none) Mouse DNA sequence from clone RP23...    78   9e-13
AK069427_1(AK069427|pid:none) Oryza sativa Japonica Group cDNA c...    77   1e-12
BC155304_1(BC155304|pid:none) Danio rerio OTU domain containing ...    77   2e-12
BT059669_1(BT059669|pid:none) Salmo salar clone ssal-rgf-541-099...    77   2e-12
AL662945_12(AL662945|pid:none) Oryza sativa genomic DNA, chromos...    76   3e-12
EU976609_1(EU976609|pid:none) Zea mays clone 984875 cysteine-typ...    76   3e-12
EU962473_1(EU962473|pid:none) Zea mays clone 242997 unknown mRNA.      76   3e-12
BT054787_1(BT054787|pid:none) Zea mays full-length cDNA clone ZM...    76   3e-12
BT054614_1(BT054614|pid:none) Zea mays full-length cDNA clone ZM...    75   5e-12
EU972219_1(EU972219|pid:none) Zea mays clone 377736 cysteine-typ...    75   5e-12
(Q96G74) RecName: Full=OTU domain-containing protein 5;         ...    75   8e-12
AC153725_16(AC153725|pid:none) Medicago truncatula clone mth2-78...    75   8e-12
AL671978_1(AL671978|pid:none) Mouse DNA sequence from clone RP23...    74   1e-11
BT054939_1(BT054939|pid:none) Zea mays full-length cDNA clone ZM...    74   1e-11
AK169921_1(AK169921|pid:none) Mus musculus NOD-derived CD11c +ve...    74   2e-11
CP000593_125(CP000593|pid:none) Ostreococcus lucimarinus CCE9901...    74   2e-11
AE014296_2110(AE014296|pid:none) Drosophila melanogaster chromos...    73   2e-11
AE014296_2108(AE014296|pid:none) Drosophila melanogaster chromos...    73   2e-11
DQ683053_1(DQ683053|pid:none) Synthetic construct OTU-containing...    73   2e-11
AL162751_6(AL162751|pid:none) Arabidopsis thaliana DNA chromosom...    73   3e-11
H84671(H84671)hypothetical protein At2g27350 [imported] - Arabid...    72   4e-11
FN314502_1(FN314502|pid:none) Schistosoma japonicum isolate Anhu...    72   4e-11
FN319026_1(FN319026|pid:none) Schistosoma japonicum isolate Anhu...    72   4e-11
AM445156_1(AM445156|pid:none) Vitis vinifera contig VV78X067066....    72   4e-11
CP001574_66(CP001574|pid:none) Micromonas sp. RCC299 chromosome ...    72   7e-11
CP000583_456(CP000583|pid:none) Ostreococcus lucimarinus CCE9901...    70   1e-10
FN357844_2(FN357844|pid:none) Schistosoma mansoni genome sequenc...    70   2e-10
BX538351_87(BX538351|pid:none) Cryptosporidium parvum chromosome...    70   2e-10
CR954213_136(CR954213|pid:none) Ostreococcus tauri strain OTTH05...    69   3e-10
AK294590_1(AK294590|pid:none) Homo sapiens cDNA FLJ58178 complet...    69   4e-10
AL391716_17(AL391716|pid:none) Arabidopsis thaliana DNA chromoso...    69   4e-10
EU969991_1(EU969991|pid:none) Zea mays clone 338266 OTU domain-c...    69   4e-10
EU968913_1(EU968913|pid:none) Zea mays clone 324935 OTU domain-c...    69   4e-10
AK071971_1(AK071971|pid:none) Oryza sativa Japonica Group cDNA c...    69   6e-10
(Q01804) RecName: Full=OTU domain-containing protein 4; AltName:...    67   1e-09
BT087766_1(BT087766|pid:none) Zea mays full-length cDNA clone ZM...    66   3e-09
AL163816_4(AL163816|pid:none) Arabidopsis thaliana DNA chromosom...    66   3e-09
BC122971_1(BC122971|pid:none) Xenopus tropicalis HIV-1 induced p...    66   3e-09
AK066247_1(AK066247|pid:none) Oryza sativa Japonica Group cDNA c...    66   3e-09
CP000596_38(CP000596|pid:none) Ostreococcus lucimarinus CCE9901 ...    65   8e-09
(Q7ZV00) RecName: Full=OTU domain-containing protein 6B;  &BC046...    64   1e-08
CR940348_219(CR940348|pid:none) Theileria annulata strain Ankara...    64   2e-08
BT026351_1(BT026351|pid:none) Arabidopsis thaliana At3g22260 gen...    64   2e-08
AM920436_558(AM920436|pid:none) Penicillium chrysogenum Wisconsi...    62   7e-08
(P38747) RecName: Full=OTU domain-containing protein 2;  &AY6926...    61   9e-08
CR382129_745(CR382129|pid:none) Yarrowia lipolytica strain CLIB1...    61   9e-08
(Q6IE21) RecName: Full=OTU domain-containing protein 6A; AltName...    61   1e-07
AK166445_1(AK166445|pid:none) Mus musculus mammary gland RCB-052...    61   1e-07
AL831792_1(AL831792|pid:none) Mouse DNA sequence from clone RP23...    60   2e-07
(Q8K2H2) RecName: Full=OTU domain-containing protein 6B;  &AK169...    60   2e-07
AK155761_1(AK155761|pid:none) Mus musculus B6-derived CD11 +ve d...    60   2e-07
CR380956_58(CR380956|pid:none) Candida glabrata strain CBS138 ch...    60   3e-07
AK073551_1(AK073551|pid:none) Oryza sativa Japonica Group cDNA c...    60   3e-07
AL713978_6(AL713978|pid:none) Mouse DNA sequence from clone RP23...    59   3e-07
EU953913_1(EU953913|pid:none) Zea mays clone 1449285 unknown mRNA.     59   4e-07
CU928181_221(CU928181|pid:none) Zygosaccharomyces rouxii strain ...    59   4e-07
DQ643392_84(DQ643392|pid:none) Aedes taeniorhynchus iridescent v...    58   7e-07
AF151836_1(AF151836|pid:none) Homo sapiens CGI-77 protein mRNA, ...    58   7e-07
AL606610_12(AL606610|pid:none) Oryza sativa genomic DNA, chromos...    58   1e-06
(Q8N6M0) RecName: Full=OTU domain-containing protein 6B; AltName...    58   1e-06
AL137441_1(AL137441|pid:none) Homo sapiens mRNA; cDNA DKFZp761P2...    58   1e-06
AK293843_1(AK293843|pid:none) Homo sapiens cDNA FLJ60450 complet...    57   1e-06
AY918066_1(AY918066|pid:none) Danio rerio OTU-like protein mRNA,...    57   2e-06
AK016972_1(AK016972|pid:none) Mus musculus adult male testis cDN...    57   2e-06
(Q5VV17) RecName: Full=OTU domain-containing protein 1; AltName:...    57   2e-06
AP002046_4(AP002046|pid:none) Arabidopsis thaliana genomic DNA, ...    57   2e-06
AK342593_1(AK342593|pid:none) Acyrthosiphon pisum ACYPI000204 mR...    56   3e-06
AM910989_203(AM910989|pid:none) Plasmodium knowlesi strain H chr...    55   5e-06
AM466592_1(AM466592|pid:none) Vitis vinifera contig VV78X273584....    55   5e-06
DQ221693_1(DQ221693|pid:none) Xiphophorus maculatus transposon H...    55   5e-06
CR382137_502(CR382137|pid:none) Debaryomyces hansenii strain CBS...    54   1e-05
AK316522_1(AK316522|pid:none) Homo sapiens cDNA, FLJ79421 comple...    54   2e-05
AK300394_1(AK300394|pid:none) Homo sapiens cDNA FLJ50394 complet...    54   2e-05
AK302729_1(AK302729|pid:none) Homo sapiens cDNA FLJ61626 complet...    54   2e-05
AL590148_1(AL590148|pid:none) Zebrafish DNA sequence from clone ...    54   2e-05
AK316306_1(AK316306|pid:none) Homo sapiens cDNA, FLJ79205 comple...    54   2e-05
T21195(T21195) hypothetical protein F21D5.2 - Caenorhabditis ele...    53   2e-05
AK316676_1(AK316676|pid:none) Arabidopsis thaliana AT3G62940 mRN...    52   4e-05
AC159432_8(AC159432|pid:none) Trypanosoma brucei chromosome 5 cl...    52   4e-05
FN392319_822(FN392319|pid:none) Pichia pastoris GS115 chromosome...    52   5e-05
AM269955_53(AM269955|pid:none) Aspergillus niger contig An01c008...    52   5e-05
AC159451_42(AC159451|pid:none) Trypanosoma brucei chromosome 8 c...    51   9e-05
CP000501_269(CP000501|pid:none) Pichia stipitis CBS 6054 chromos...    51   1e-04
(P22856) RecName: Full=L96 protein;  &JH0225(JH0225) &M62953_1(M...    50   2e-04
AE014298_1236(AE014298|pid:none) Drosophila melanogaster chromos...    50   2e-04
AB170925_1(AB170925|pid:none) Macaca fascicularis brain cDNA clo...    50   2e-04
(P10383) RecName: Full=Protein ovarian tumor locus;  &AE014298_1...    50   2e-04
M30825_1(M30825|pid:none) Drosophila melanogaster ovarian tumor ...    50   2e-04
AC004697_4(AC004697|pid:none) Arabidopsis thaliana chromosome 2 ...    50   3e-04
AL844508_230(AL844508|pid:none) Plasmodium falciparum 3D7 chromo...    50   3e-04
CR450685_2(CR450685|pid:none) Zebrafish DNA sequence from clone ...    50   3e-04
BC141761_1(BC141761|pid:none) Xenopus laevis hypothetical protei...    49   5e-04
CP001576_507(CP001576|pid:none) Micromonas sp. RCC299 chromosome...    48   8e-04
(Q6GM06) OTU domain-containing protein 6B.  &BC074286_1(BC074286...    47   0.002
EU591746_77(EU591746|pid:none) Adoxophyes orana nucleopolyhedrov...    47   0.002
DQ837165_83(DQ837165|pid:none) Ecotropis obliqua NPV strain A1, ...    46   0.003
AE016815_250(AE016815|pid:none) Ashbya gossypii (= Eremothecium ...    45   0.005
AF067616_2(AF067616|pid:none) Caenorhabditis elegans cosmid F29C...    45   0.005
AM494953_144(AM494953|pid:none) Leishmania braziliensis chromoso...    45   0.007
AF081810_106(AF081810|pid:none) Lymantria dispar nucleopolyhedro...    45   0.007
AP007159_621(AP007159|pid:none) Aspergillus oryzae RIB40 genomic...    43   0.025
AM270257_5(AM270257|pid:none) Aspergillus niger contig An11c0400...    43   0.032
AM502234_145(AM502234|pid:none) Leishmania infantum chromosome 16.     43   0.032
(O13974) RecName: Full=Putative ubiquitin thioesterase otu1;    ...    42   0.042
AY119232_1(AY119232|pid:none) Drosophila melanogaster SD17927 fu...    42   0.055
AE014296_2661(AE014296|pid:none) Drosophila melanogaster chromos...    42   0.055
AP006270_80(AP006270|pid:none) Adoxophyes honmai nucleopolyhedro...    42   0.072
FM992688_225(FM992688|pid:none) Candida dubliniensis CD36 chromo...    42   0.072
FJ227128_91(FJ227128|pid:none) Euproctis pseudoconspersa nucleop...    42   0.072
AY086909_1(AY086909|pid:none) Arabidopsis thaliana clone 29384 m...    41   0.095
AK175291_1(AK175291|pid:none) Arabidopsis thaliana mRNA, complet...    41   0.095
AK061508_2(AK061508|pid:none) Oryza sativa Japonica Group cDNA c...    41   0.12
AM428276_1(AM428276|pid:none) Vitis vinifera contig VV78X162238....    41   0.12
AL032631_13(AL032631|pid:none) Caenorhabditis elegans YAC Y106G6...    41   0.12
BT080665_1(BT080665|pid:none) Caligus clemensi clone ccle-evs-50...    40   0.16
BT060762_1(BT060762|pid:none) Zea mays full-length cDNA clone ZM...    40   0.16
AY893162_1(AY893162|pid:none) Synthetic construct Homo sapiens c...    40   0.21
AK302581_1(AK302581|pid:none) Homo sapiens cDNA FLJ56410 complet...    40   0.21
EU257628_1(EU257628|pid:none) Kupe virus isolate K611 segment L,...    40   0.21
DQ427109_1(DQ427109|pid:none) Homo sapiens OTU domain containing...    40   0.21
FN357354_65(FN357354|pid:none) Schistosoma mansoni genome sequen...    40   0.21
AY890681_1(AY890681|pid:none) Synthetic construct Homo sapiens c...    40   0.21
AB168919_1(AB168919|pid:none) Macaca fascicularis testis cDNA, c...    40   0.21
AP007150_183(AP007150|pid:none) Aspergillus oryzae RIB40 genomic...    40   0.28
EF677014_1(EF677014|pid:none) Picea sitchensis clone WS02760_B20...    40   0.28
T33144(T33144)hypothetical protein F29C4.5 - Caenorhabditis eleg...    39   0.36
CR382130_538(CR382130|pid:none) Yarrowia lipolytica strain CLIB1...    39   0.47
AC115599_3(AC115599|pid:none) Dictyostelium discoideum chromosom...    39   0.61
CR954217_142(CR954217|pid:none) Ostreococcus tauri strain OTTH05...    39   0.61
CR954209_212(CR954209|pid:none) Ostreococcus tauri strain OTTH05...    38   0.80
AK073328_1(AK073328|pid:none) Oryza sativa Japonica Group cDNA c...    37   1.4
DQ504428_90(DQ504428|pid:none) Clanis bilineata nucleopolyhedros...    37   1.4
CU928178_95(CU928178|pid:none) Zygosaccharomyces rouxii strain C...    37   1.8
AM920435_823(AM920435|pid:none) Penicillium chrysogenum Wisconsi...    37   2.3
AM455857_1(AM455857|pid:none) Vitis vinifera contig VV78X172851....    36   3.0
(O97239) RecName: Full=Protein dopey homolog PFC0245c;  &AL03455...    36   3.0
FM992689_807(FM992689|pid:none) Candida dubliniensis CD36 chromo...    36   4.0
EU965296_1(EU965296|pid:none) Zea mays clone 285079 unknown mRNA.      36   4.0
EF083462_1(EF083462|pid:none) Picea sitchensis clone WS02714_D12...    36   4.0
BT040650_1(BT040650|pid:none) Zea mays full-length cDNA clone ZM...    36   4.0
(Q54NF1) RecName: Full=Vacuolar protein sorting-associated prote...    35   5.2
AE016815_447(AE016815|pid:none) Ashbya gossypii (= Eremothecium ...    35   5.2
(Q54HD2) RecName: Full=Probable serine/threonine-protein kinase ...    35   6.8
DQ177346_58(DQ177346|pid:none) Koi herpesvirus strain KHV-I, com...    35   6.8
AP008984_71(AP008984|pid:none) Cyprinid herpesvirus 3 DNA, compl...    35   6.8
AE014188_72(AE014188|pid:none) Plasmodium falciparum 3D7 chromos...    35   8.8

>AL732356_2(AL732356|pid:none) Oryza sativa genomic DNA, chromosome 4,
            BAC clone: H0624F09, complete sequence.
          Length = 397

 Score =  137 bits (344), Expect = 1e-30
 Identities = 89/276 (32%), Positives = 130/276 (47%), Gaps = 4/276 (1%)
 Frame = +2

Query: 218  RKRKERLKHGDESWKRGIVKFQQQLEPFGFIIKDVAGDGNCLFRSIADQLQDAPNEHRKY 397
            RK K   +    + K  + +F+ QL+  G  I +V+ DGNC FR++ DQL+    EH KY
Sbjct: 16   RKPKRDAEEKKFAKKADMTEFRAQLDSLGLKIIEVSADGNCFFRAMGDQLEGNEEEHMKY 75

Query: 398  REAICKYIEKNKDMFAPFIXXXXXXXXXXYIQEMREDATWGGHVEIQAASLAYNVNITIH 577
            R  I +YI++++  F PFI          Y   M ED TW GH+E+QAAS+    NI IH
Sbjct: 76   RAMIVQYIKEHRVDFEPFIEDEEPFEK--YCDSMLEDGTWAGHMELQAASILKRKNICIH 133

Query: 578  QMDQPRWEIVNHFPPEKNKTIHLSYHNDEHYNSVR----PANQSLYPTKSTSSSPVPNFD 745
             ++ PRW I N    E    IHLSYH  EHYNSVR    P      P    + + V +
Sbjct: 134  MLNSPRWYIRNFSDREATSMIHLSYHQGEHYNSVRLREDPCQGPAMPVIIKADANVASTS 193

Query: 746  NKQTFQPSSXXXXXXXXXXXXXXXXXXXSFDYNNNNGSSSFDYNNSGGNSGNFIDDSVYE 925
            N    +                        D   ++  S +D+             SV
Sbjct: 194  NNAQTKAK----------------------DLKKSSDRSKYDH------------ISVKL 219

Query: 926  IMTLTGETSVKNIKEALIDCNYNIEAAVEYLLALSL 1033
            +M  TG +++  +++ L D + +I+AA+EY+LA  L
Sbjct: 220  VMAGTGCSNIAAVEQVLKDMDGDIDAAIEYMLAEQL 255

Lambda     K      H
   0.318    0.134    0.401

Gapped
Lambda     K      H
   0.267   0.0410    0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3236559
Number of Hits to DB: 1,514,695,684
Number of extensions: 26974575
Number of successful extensions: 103100
Number of sequences better than 10.0: 170
Number of HSP's gapped: 92238
Number of HSP's successfully gapped: 172
Length of query: 478
Length of database: 1,051,180,864
Length adjustment: 132
Effective length of query: 346
Effective length of database: 623,955,076
Effective search space: 215888456296
Effective search space used: 215888456296
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)

 psg: 1.01  gvh: 0.32  alm: 0.08  top: 0.93  tms: 0.07  mit: 0.26  mip: 0.00
 nuc: 0.16  erl: 0.00  erm: 0.00  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 1.00  tyr: 0.00  leu: 0.01  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 1.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 0.00 

	 48.0 %: nuclear
	 28.0 %: cytoplasmic
	  8.0 %: mitochondrial
	  8.0 %: Golgi
	  4.0 %: vesicles of secretory system
	  4.0 %: endoplasmic reticulum

>> prediction for Contig-U02846-1 is nuc