Contig-U14874-1
Contig ID Contig-U14874-1
Contig update 2002.12.18
Contig sequence
>Contig-U14874-1 (Contig-U14874-1Q) /CSM_Contig/Contig-U14874-1Q.Seq.d
NNNNNNNNNNCTGAGTCAATGTTGTGTAAAAGATTCAAAGAATGCACTAG
AAGAAAATGGCCTTATAGATATTTAAGAAAGATTGATAAATTTATCAAAT
TACTATCACTTCAAAATATCAATGAGATTCCAAAAGAAGAAAAGGAGAAG
TTAGAAAGATTCATCCAAGAAAGAGAAGGATGTCTCCGTCCAGTCAAAAT
CAGAATCACTGGTTGCTTAGAAAAGGACGACTCTGAACATTTCGTTAACA
ATGTTAATAGATTTTCAATGGGTTCATCAACTTCTTCATCAATTCCATCA
CCATCACCACAAACCATCGCCATCACACCATCAAAATCCCAAATTCAAAA
CATCGGTTATATATGGTGGTATTTCTAAAAACCTTCAGATTGAACAATTG
GAAAAAGAAAAACCACAAATTTTAATATCAACACCGGGTCGTTTAATTGA
GATGATAGAGAATGGTCATGTTGATCTTTCAAGTGTTACAATGTTAGTAC
TGGATGAGGCTGATAAAATGCTTTCCAAAGGTTTAATACCACAACTTAAA
CAAATTCGTGGTCAAATTAGACCCGATTCACAAAATATATTATTTAGTGC
CACTTTTCCAGATTCATTAAAAGAGGTTTCAAAAGATTGGATTAAAGATC
CATCGATTCGTTTAAGAATTGGTTCTTCAGAATTACCAAAACTAAATCAT
ATTCAACAAGATGCTCAATTAATTGCCCACCATAAAAAACCACGTGCACT
CATTAAACTATT

Gap no gap
Contig length 762
Chromosome number (1..6, M) 6
Chromosome length 3595308
Start point 649612
End point 649197
Strand (PLUS/MINUS) MINUS
Number of clones 1
Number of EST 1
Link to clone list U14874
List of clone(s)

est1=VHO217Z,1,753
Translated Amino Acid sequence
xxxlsqccvkdsknaleenglidi*erlinlsnyyhfkismrfqkkkrrs*kdsskkekd
vsvqskseslva*KRTTLNISLTMLIDFQWVHQLLHQFHHHHHKPSPSHHQNPKFKTSVI
YGGISKNLQIEQLEKEKPQILISTPGRLIEMIENGHVDLSSVTMLVLDEADKMLSKGLIP
QLKQIRGQIRPDSQNILFSATFPDSLKEVSKDWIKDPSIRLRIGSSELPKLNHIQQDAQL
IAHHKKPRALIKL


Translated Amino Acid sequence (All Frames)
Frame A:
xxxxesmlckrfkectrrkwpyrylrkidkfikllslqnineipkeekeklerfiqereg
clrpvkiritgclekddsehfvnnvnrfsmgsstsssipspspqtiaitpsksqiqnigy
iwwyf*kpsd*tigkrkttnfnintgsfn*ddrewsc*sfkcynvstg*g**nafqrfnt
tt*tnswsn*trftkyii*chfsrfikrgfkrld*rsidsfknwffritktksystrcsi
ncpp*kttcth*ti


Frame B:
xxxlsqccvkdsknaleenglidi*erlinlsnyyhfkismrfqkkkrrs*kdsskkekd
vsvqskseslva*KRTTLNISLTMLIDFQWVHQLLHQFHHHHHKPSPSHHQNPKFKTSVI
YGGISKNLQIEQLEKEKPQILISTPGRLIEMIENGHVDLSSVTMLVLDEADKMLSKGLIP
QLKQIRGQIRPDSQNILFSATFPDSLKEVSKDWIKDPSIRLRIGSSELPKLNHIQQDAQL
IAHHKKPRALIKL


Frame C:
xxx*vnvv*kiqrmh*kkmal*ifkkd**iyqititskyq*dskrrkgevrkihprkrrm
spssqnqnhwllrkgrl*tfr*qc**ifngfinffinsitittnhrhhtikipnskhrly
mvvflktfrlnnwkkknhkf*yqhrvv*lr**rmvmlifqvlqc*ywmrlikcfpkv*yh
nlnkfvvkldpihkiyylvplfqih*krfqkiglkihrfv*elvlqnyqn*iifnkmln*
lptiknhvhslny


own update 2004. 6.10
Homology vs CSM-cDNA
Query= Contig-U14874-1 (Contig-U14874-1Q)
/CSM_Contig/Contig-U14874-1Q.Seq.d
(762 letters)

Database: CSM
6905 sequences; 5,674,871 total letters


Score E
Sequences producing significant alignments: (bits) Value

Contig-U14874-1 (Contig-U14874-1Q) /CSM_Contig/Conti... 1491 0.0
Contig-U11240-1 (Contig-U11240-1Q) /CSM_Contig/Conti... 240 2e-63
Contig-U05260-1 (Contig-U05260-1Q) /CSM_Contig/Conti... 40 0.003
Contig-U12022-1 (Contig-U12022-1Q) /CSM_Contig/Conti... 38 0.014
Contig-U10879-1 (Contig-U10879-1Q) /CSM_Contig/Conti... 36 0.053
Contig-U10839-1 (Contig-U10839-1Q) /CSM_Contig/Conti... 36 0.053
Contig-U10450-1 (Contig-U10450-1Q) /CSM_Contig/Conti... 36 0.053
Contig-U13870-1 (Contig-U13870-1Q) /CSM_Contig/Conti... 34 0.21
Contig-U11841-1 (Contig-U11841-1Q) /CSM_Contig/Conti... 34 0.21
Contig-U11649-1 (Contig-U11649-1Q) /CSM_Contig/Conti... 34 0.21

>Contig-U14874-1 (Contig-U14874-1Q) /CSM_Contig/Contig-U14874-1Q.Seq.d
Length = 762

Score = 1491 bits (752), Expect = 0.0
Identities = 752/752 (100%)
Strand = Plus / Plus


Query: 11 ctgagtcaatgttgtgtaaaagattcaaagaatgcactagaagaaaatggccttatagat 70
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11 ctgagtcaatgttgtgtaaaagattcaaagaatgcactagaagaaaatggccttatagat 70


Query: 71 atttaagaaagattgataaatttatcaaattactatcacttcaaaatatcaatgagattc 130
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 71 atttaagaaagattgataaatttatcaaattactatcacttcaaaatatcaatgagattc 130


Query: 131 caaaagaagaaaaggagaagttagaaagattcatccaagaaagagaaggatgtctccgtc 190
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 131 caaaagaagaaaaggagaagttagaaagattcatccaagaaagagaaggatgtctccgtc 190


Query: 191 cagtcaaaatcagaatcactggttgcttagaaaaggacgactctgaacatttcgttaaca 250
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 191 cagtcaaaatcagaatcactggttgcttagaaaaggacgactctgaacatttcgttaaca 250


Query: 251 atgttaatagattttcaatgggttcatcaacttcttcatcaattccatcaccatcaccac 310
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 251 atgttaatagattttcaatgggttcatcaacttcttcatcaattccatcaccatcaccac 310


Query: 311 aaaccatcgccatcacaccatcaaaatcccaaattcaaaacatcggttatatatggtggt 370
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 311 aaaccatcgccatcacaccatcaaaatcccaaattcaaaacatcggttatatatggtggt 370


Query: 371 atttctaaaaaccttcagattgaacaattggaaaaagaaaaaccacaaattttaatatca 430
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 371 atttctaaaaaccttcagattgaacaattggaaaaagaaaaaccacaaattttaatatca 430


Query: 431 acaccgggtcgtttaattgagatgatagagaatggtcatgttgatctttcaagtgttaca 490
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 431 acaccgggtcgtttaattgagatgatagagaatggtcatgttgatctttcaagtgttaca 490


Query: 491 atgttagtactggatgaggctgataaaatgctttccaaaggtttaataccacaacttaaa 550
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 491 atgttagtactggatgaggctgataaaatgctttccaaaggtttaataccacaacttaaa 550


Query: 551 caaattcgtggtcaaattagacccgattcacaaaatatattatttagtgccacttttcca 610
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 551 caaattcgtggtcaaattagacccgattcacaaaatatattatttagtgccacttttcca 610


Query: 611 gattcattaaaagaggtttcaaaagattggattaaagatccatcgattcgtttaagaatt 670
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 611 gattcattaaaagaggtttcaaaagattggattaaagatccatcgattcgtttaagaatt 670


Query: 671 ggttcttcagaattaccaaaactaaatcatattcaacaagatgctcaattaattgcccac 730
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 671 ggttcttcagaattaccaaaactaaatcatattcaacaagatgctcaattaattgcccac 730


Query: 731 cataaaaaaccacgtgcactcattaaactatt 762
||||||||||||||||||||||||||||||||
Sbjct: 731 cataaaaaaccacgtgcactcattaaactatt 762


Score = 32.2 bits (16), Expect = 0.84
Identities = 16/16 (100%)
Strand = Plus / Minus


Query: 83 ttgataaatttatcaa 98
||||||||||||||||
Sbjct: 98 ttgataaatttatcaa 83


>Contig-U11240-1 (Contig-U11240-1Q) /CSM_Contig/Contig-U11240-1Q.Seq.d
Length = 889

Score = 240 bits (121), Expect = 2e-63
Identities = 121/121 (100%)
Strand = Plus / Plus


Query: 234 tgaacatttcgttaacaatgttaatagattttcaatgggttcatcaacttcttcatcaat 293
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 582 tgaacatttcgttaacaatgttaatagattttcaatgggttcatcaacttcttcatcaat 641


Query: 294 tccatcaccatcaccacaaaccatcgccatcacaccatcaaaatcccaaattcaaaacat 353
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 642 tccatcaccatcaccacaaaccatcgccatcacaccatcaaaatcccaaattcaaaacat 701


Query: 354 c 354
|
Sbjct: 702 c 702


>Contig-U05260-1 (Contig-U05260-1Q) /CSM_Contig/Contig-U05260-1Q.Seq.d
Length = 483

Score = 40.1 bits (20), Expect = 0.003
Identities = 23/24 (95%)
Strand = Plus / Plus


Query: 390 ttgaacaattggaaaaagaaaaac 413
|||||||||| |||||||||||||
Sbjct: 130 ttgaacaatttgaaaaagaaaaac 153


Database: CSM
Posted date: Jun 9, 2004 7:35 PM
Number of letters in database: 5,674,871
Number of sequences in database: 6905

Lambda K H
1.37 0.711 1.31

Gapped
Lambda K H
1.37 0.711 1.31


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 11,509
Number of Sequences: 6905
Number of extensions: 11509
Number of successful extensions: 1174
Number of sequences better than 10.0: 125
length of query: 762
length of database: 5,674,871
effective HSP length: 16
effective length of query: 746
effective length of database: 5,564,391
effective search space: 4151035686
effective search space used: 4151035686
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 15 (30.2 bits)
dna update 2009. 1. 4
Homology vs DNA
Query= Contig-U14874-1 (Contig-U14874-1Q) /CSM_Contig/Contig-U14874-1Q.Seq.d
(762 letters)

Database: ddbj_A
92,845,959 sequences; 95,242,211,685 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value N

(BJ445275) Dictyostelium discoideum cDNA clone:ddv59a06, 3' ... 1491 0.0 1
(BJ349294) Dictyostelium discoideum cDNA clone:dda36e02, 3' ... 466 e-161 2
(DY298906) IC0AAA96DE04RM1 CitNFL Citrus clementina cDNA 5',... 56 0.002 1
(DY283769) IC0AAA5BH12RM1 CitNFL Citrus clementina cDNA 5', ... 56 0.002 1
(DY280391) IC0AAA51AD07RM1 CitNFL Citrus clementina cDNA 5',... 56 0.002 1
(DY273743) IC0AAA34DC02RM1 CitNFL Citrus clementina cDNA 5',... 56 0.002 1
(CX676328) UCRCS08_68G07_g Parent Washington Navel Orange Ca... 56 0.002 1
(CX664479) UCRCP01_010_E01_T3 Swingle citrumelo nematode-cha... 56 0.002 1
(CX663998) UCRCP01_007_D02_T7 Swingle citrumelo nematode-cha... 56 0.002 1
(CX663997) UCRCP01_007_D02_T3 Swingle citrumelo nematode-cha... 56 0.002 1
(CX663506) UCRCP01_004_C08_T3 Swingle citrumelo nematode-cha... 56 0.002 1
(CX299597) C06024B08SK RindPdig24 Citrus clementina cDNA clo... 56 0.002 1
(CX071137) UCRCS08_20A07_g Parent Washington Navel Orange Ca... 56 0.002 1
(CX053627) UCRCS09_7B10_g Ruby Orange Developing Seed cDNA L... 56 0.002 1
(CX048131) UCRCS09_19C02_b Ruby Orange Developing Seed cDNA ... 56 0.002 1
(CV887280) UCRCS04_2_030D01_T7 Ruby Orange Developing Flower... 56 0.002 1
(CV885849) UCRCS04_2_01D12_T7 Ruby Orange Developing Flower ... 56 0.002 1
(CV713598) UCRCS08_0003A16_r Parent Washington Navel Orange ... 56 0.002 1
(CV712161) UCRCS08_0001A04_f Parent Washington Navel Orange ... 56 0.002 1
(CV710551) UCRPT01_0014J01_r Poncirus trifoliata CTV-challen... 56 0.002 1
(CK936004) CGF1004388_A02 Developing fruit 24 DAFB Citrus si... 56 0.002 1
(CK701763) USDA-FP_5024 Ridge pineapple sweet orange entire ... 56 0.002 1
(CF828602) UCRCR01_01N10_r Clementine Mandarin Albedo at Rin... 56 0.002 1
(CF828353) UCRCR01_01H10_r Clementine Mandarin Albedo at Rin... 56 0.002 1
(CB293061) UCRCS01_05ca09_g1 Washington Navel orange cold ac... 56 0.002 1
(EY839590) PT11-C9-005-016-G07-CT.F Poncirus trifoliata seed... 56 0.002 1
(EY834241) PT11-C2-301-002-C05-CT.F Poncirus trifoliata bark... 56 0.002 1
(EY814978) PT11-C1-900-057-F11-CT.F Poncirus trifoliata leaf... 56 0.002 1
(EY814824) PT11-C1-900-054-A03-CT.F Poncirus trifoliata leaf... 56 0.002 1
(EY807906) CR05-C3-702-063-C09-CT.F Mandarin fruit, developm... 56 0.002 1
(EY807851) CR05-C3-702-052-E06-CT.F Mandarin fruit, developm... 56 0.002 1
(EY806575) CR05-C3-702-065-H03-CT.F Mandarin fruit, developm... 56 0.002 1
(EY806387) CR05-C3-702-059-D04-CT.F Mandarin fruit, developm... 56 0.002 1
(EY806337) CR05-C3-702-057-G03-CT.F Mandarin fruit, developm... 56 0.002 1
(EY805936) CR05-C3-702-058-C10-CT.F Mandarin fruit, developm... 56 0.002 1
(EY797771) CR05-C3-701-056-C02-CT.F Mandarin fruit, developm... 56 0.002 1
(EY767763) CR05-C1-102-020-B10-CT.F Mandarin leaf, infected ... 56 0.002 1
(EY760819) CR05-C1-100-032-B03-CT.F Mandarin leaf, greenhous... 56 0.002 1
(EY745738) CS00-C5-003-021-A07-CT.F Sweet orange flower, gre... 56 0.002 1
(EY727959) CS00-C3-703-107-F08-CT.F Sweet orange fruit, deve... 56 0.002 1
(EY725295) CS00-C3-703-005-C12-CT.F Sweet orange fruit, deve... 56 0.002 1
(EY724877) CS00-C3-703-082-G10-CT.F Sweet orange fruit, deve... 56 0.002 1
(EY724312) CS00-C3-703-074-D04-CT.F Sweet orange fruit, deve... 56 0.002 1
(EY710975) CS00-C3-702-002-C07-CT.F Sweet orange fruit, deve... 56 0.002 1
(EY702176) CS00-C3-701-001-H07-CT.F Sweet orange fruit, deve... 56 0.002 1
(EY694344) CS00-C3-700-024-E04-CT.F Sweet orange fruit, deve... 56 0.002 1
(EY660805) CS00-C1-101-026-B09-CT.F Sweet orange leaf, infec... 56 0.002 1
(EY660190) CS00-C1-101-019-E06-CT.F Sweet orange leaf, infec... 56 0.002 1
(DB999044) Quercus mongolica subsp. crispula mRNA, clone: Qm... 54 0.008 1
(DB998356) Quercus mongolica subsp. crispula mRNA, clone: Qm... 54 0.008 1
(DB998306) Quercus mongolica subsp. crispula mRNA, clone: Qm... 54 0.008 1
(DB998212) Quercus mongolica subsp. crispula mRNA, clone: Qm... 54 0.008 1
(DB996977) Quercus mongolica subsp. crispula mRNA, clone: Qm... 54 0.008 1
(BP961702) Euphorbia tirucalli mRNA, clone: ETC054H10, 5' end. 54 0.008 1
(BP961701) Euphorbia tirucalli mRNA, clone: ETC078C01, 5' end. 54 0.008 1
(CU927922) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 52 0.031 1
(DY290812) IC0AAA76BG11RM1 CitNFL Citrus clementina cDNA 5',... 52 0.031 1
(EY819711) PT11-C1-901-011-B12-CT.F Poncirus trifoliata leaf... 52 0.031 1
(EY764163) CR05-C1-100-077-B05-CT.F Mandarin leaf, greenhous... 52 0.031 1
(EY720854) CS00-C3-703-015-C06-CT.F Sweet orange fruit, deve... 52 0.031 1
(AZ674216) ENTJM06TF Entamoeba histolytica Sheared DNA Entam... 50 0.12 1
(EI430115) PV_GBa0021L23.r PV_GBa Phaseolus vulgaris genomic... 50 0.12 1
(ES730262) Nad03b_3_E06_C005.g1 Nuphar advena flower bud lib... 50 0.12 1
(DT605021) nad03-42ms1-b12 Nad03 Nuphar advena cDNA clone na... 50 0.12 1
(DT589573) nad03-44ms3-b12 Nad03 Nuphar advena cDNA clone na... 50 0.12 1
(CV530752) ALV_014D_C07 Phaseolus vulgaris leaf EST library ... 50 0.12 1
(EY695637) CS00-C3-700-038-F07-CT.F Sweet orange fruit, deve... 50 0.12 1
(CW409904) fsbb001f104g17k0 Sorghum methylation filtered lib... 42 0.31 2
(AE013101) Thermoanaerobacter tengcongensis MB4, section 128... 44 0.44 2
(AL928631) Mouse DNA sequence from clone RP23-240K15 on chro... 48 0.49 1
(AC212601) Macaca mulatta BAC CH250-340P22 (Children's Hosp... 48 0.49 1
(AC174465) Medicago truncatula chromosome 2 clone mth2-189f2... 48 0.49 1
(ED680859) GM_WBb0013N05.f GM_WBb Glycine max genomic clone ... 48 0.49 1
(DU881302) 388355 Tomato HindIII BAC Library Solanum lycoper... 48 0.49 1
(DU849414) 44078 Tomato HindIII BAC Library Solanum lycopers... 48 0.49 1
(CG815042) SOYAV94TV LargeInsertSoybeanGenLib Glycine max ge... 48 0.49 1
(ES749557) BGBV-aad71d05.b1 Snail_EST_pSMART Biomphalaria gl... 48 0.49 1
(ES272666) BGBV-aac53g01.g1 Snail_EST_pSMART Biomphalaria gl... 48 0.49 1
(EL688950) OPSC00714 Elaeis guineensis Suspension cell cultu... 48 0.49 1
(EG972436) THCK-1327 Tamarix hispida roots Tamarix hispida c... 48 0.49 1
(EE722753) camnoP089D10 camno Biomphalaria glabrata cDNA clo... 48 0.49 1
(EE198779) CC-F01_013_N10 Cherry of different development st... 48 0.49 1
(EE198620) CC-F01_013_E08 Cherry of different development st... 48 0.49 1
(DW511947) GH_TMIRS_158_D11_F Cotton Normalized Library dT p... 48 0.49 1
(DW506835) GH_TMIRS_107_H07_R Cotton Normalized Library dT p... 48 0.49 1
(DW474443) camceP053A11 camce Biomphalaria glabrata cDNA clo... 48 0.49 1
(DV698566) CGN-44242 Seed of Late Development Stage Coffea c... 48 0.49 1
(DV697598) CGN-43050 Leaf Coffea canephora cDNA clone cccl30... 48 0.49 1
(DV694857) CGN-39522 Seed of Late Development Stage Coffea c... 48 0.49 1
(DV692395) CGN-36309 Leaf Coffea canephora cDNA clone cccl20... 48 0.49 1
(DV691947) CGN-35747 Leaf Coffea canephora cDNA clone cccl16... 48 0.49 1
(DV691938) CGN-35737 Leaf Coffea canephora cDNA clone cccl17... 48 0.49 1
(DV683760) CGN-24361 Seed of Middle Development Stage Coffea... 48 0.49 1
(DV666862) CGN-4883 Pericarp Coffea canephora cDNA clone ccc... 48 0.49 1
(CV539540) POD_020_C06 Phaseolus vulgaris pod EST library Ph... 48 0.49 1
(CV492359) 36420.1 Cold Sweetening B Solanum tuberosum cDNA ... 48 0.49 1
(CU640825) Quercus robur leaves EST, clone SSH5GFPL4B12. 48 0.49 1
(CU640733) Quercus robur leaves EST, clone SSH5GFPL1H10. 48 0.49 1
(CK242489) rx10g09.y1 Meloidogyne paranaensis egg SMART pGEM... 48 0.49 1
(CK242451) rx10c10.y1 Meloidogyne paranaensis egg SMART pGEM... 48 0.49 1

>(BJ445275) Dictyostelium discoideum cDNA clone:ddv59a06, 3' end,
single read.
Length = 753

Score = 1491 bits (752), Expect = 0.0
Identities = 752/752 (100%)
Strand = Plus / Minus


Query: 11 ctgagtcaatgttgtgtaaaagattcaaagaatgcactagaagaaaatggccttatagat 70
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 753 ctgagtcaatgttgtgtaaaagattcaaagaatgcactagaagaaaatggccttatagat 694


Query: 71 atttaagaaagattgataaatttatcaaattactatcacttcaaaatatcaatgagattc 130
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 693 atttaagaaagattgataaatttatcaaattactatcacttcaaaatatcaatgagattc 634


Query: 131 caaaagaagaaaaggagaagttagaaagattcatccaagaaagagaaggatgtctccgtc 190
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 633 caaaagaagaaaaggagaagttagaaagattcatccaagaaagagaaggatgtctccgtc 574


Query: 191 cagtcaaaatcagaatcactggttgcttagaaaaggacgactctgaacatttcgttaaca 250
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 573 cagtcaaaatcagaatcactggttgcttagaaaaggacgactctgaacatttcgttaaca 514


Query: 251 atgttaatagattttcaatgggttcatcaacttcttcatcaattccatcaccatcaccac 310
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 513 atgttaatagattttcaatgggttcatcaacttcttcatcaattccatcaccatcaccac 454


Query: 311 aaaccatcgccatcacaccatcaaaatcccaaattcaaaacatcggttatatatggtggt 370
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 453 aaaccatcgccatcacaccatcaaaatcccaaattcaaaacatcggttatatatggtggt 394


Query: 371 atttctaaaaaccttcagattgaacaattggaaaaagaaaaaccacaaattttaatatca 430
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 393 atttctaaaaaccttcagattgaacaattggaaaaagaaaaaccacaaattttaatatca 334


Query: 431 acaccgggtcgtttaattgagatgatagagaatggtcatgttgatctttcaagtgttaca 490
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 333 acaccgggtcgtttaattgagatgatagagaatggtcatgttgatctttcaagtgttaca 274


Query: 491 atgttagtactggatgaggctgataaaatgctttccaaaggtttaataccacaacttaaa 550
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 273 atgttagtactggatgaggctgataaaatgctttccaaaggtttaataccacaacttaaa 214


Query: 551 caaattcgtggtcaaattagacccgattcacaaaatatattatttagtgccacttttcca 610
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 213 caaattcgtggtcaaattagacccgattcacaaaatatattatttagtgccacttttcca 154


Query: 611 gattcattaaaagaggtttcaaaagattggattaaagatccatcgattcgtttaagaatt 670
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 153 gattcattaaaagaggtttcaaaagattggattaaagatccatcgattcgtttaagaatt 94


Query: 671 ggttcttcagaattaccaaaactaaatcatattcaacaagatgctcaattaattgcccac 730
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 93 ggttcttcagaattaccaaaactaaatcatattcaacaagatgctcaattaattgcccac 34


Query: 731 cataaaaaaccacgtgcactcattaaactatt 762
||||||||||||||||||||||||||||||||
Sbjct: 33 cataaaaaaccacgtgcactcattaaactatt 2

Lambda K H
1.37 0.711 1.31

Matrix: blastn matrix:1 -3
Number of Sequences: 92845959
Number of Hits to DB: 983,515,536
Number of extensions: 64282134
Number of successful extensions: 5283887
Number of sequences better than 10.0: 388
Length of query: 762
Length of database: 95,242,211,685
Length adjustment: 24
Effective length of query: 738
Effective length of database: 97,308,875,965
Effective search space: 71813950462170
Effective search space used: 71813950462170
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)

protein update 2009. 7.13
Homology vs Protein
Query= Contig-U14874-1 (Contig-U14874-1Q) /CSM_Contig/Contig-U14874-1Q.Seq.d
(762 letters)

Database: nrp_B
3,236,559 sequences; 1,051,180,864 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value

(Q54CD6) RecName: Full=Probable ATP-dependent RNA helicase ddx5;... 270 5e-71
(Q5QMN3) RecName: Full=DEAD-box ATP-dependent RNA helicase 20; ... 116 7e-25
(A7TTT5) RecName: Full=ATP-dependent RNA helicase DBP2; ... 116 9e-25
(A3LQW7) RecName: Full=ATP-dependent RNA helicase DBP2; ... 115 1e-24
BT041534_1(BT041534|pid:none) Zea mays full-length cDNA clone ZM... 115 1e-24
(Q6FLF3) RecName: Full=ATP-dependent RNA helicase DBP2; ... 115 2e-24
Z69382_20(Z69382|pid:none) S.cerevisiae 37,800 bp segment of chr... 114 3e-24
(P24783) RecName: Full=ATP-dependent RNA helicase DBP2; ... 114 3e-24
CU928168_385(CU928168|pid:none) Kluyveromyces thermotolerans str... 113 7e-24
(Q6C4D4) RecName: Full=ATP-dependent RNA helicase DBP2; ... 112 1e-23
AP003416_31(AP003416|pid:none) Oryza sativa Japonica Group genom... 112 2e-23
FN392322_194(FN392322|pid:none) Pichia pastoris GS115 chromosome... 112 2e-23
(Q5N7W4) RecName: Full=DEAD-box ATP-dependent RNA helicase 30; ... 112 2e-23
GM694491_1(GM694491|pid:none) Sequence 47 from Patent EP1953235.... 111 2e-23
(A5DL80) RecName: Full=ATP-dependent RNA helicase DBP2; ... 110 4e-23
(Q4IF76) RecName: Full=ATP-dependent RNA helicase DBP2; ... 110 5e-23
(Q7SBC6) RecName: Full=ATP-dependent RNA helicase dbp-2; ... 110 5e-23
(A7E449) RecName: Full=ATP-dependent RNA helicase dbp2; ... 110 5e-23
AY466159_1(AY466159|pid:none) Zea mays DEAD box RNA helicase (DR... 110 6e-23
(Q6BY27) RecName: Full=ATP-dependent RNA helicase DBP2; ... 110 6e-23
(A4QSS5) RecName: Full=ATP-dependent RNA helicase DBP2; ... 109 8e-23
(A5DS77) RecName: Full=ATP-dependent RNA helicase DBP2; ... 109 1e-22
T22917(T22917) probable ATP-dependent RNA helicase F58E10.3 [sim... 108 2e-22
FN357329_34(FN357329|pid:none) Schistosoma mansoni genome sequen... 107 3e-22
FN357329_33(FN357329|pid:none) Schistosoma mansoni genome sequen... 107 3e-22
(Q54CE0) RecName: Full=Probable ATP-dependent RNA helicase ddx17... 107 4e-22
(Q2U070) RecName: Full=ATP-dependent RNA helicase dbp2; ... 107 4e-22
(Q4X195) RecName: Full=ATP-dependent RNA helicase dbp2; ... 107 5e-22
(Q5KFM6) RecName: Full=ATP-dependent RNA helicase DBP2-A; ... 107 5e-22
(A1DGZ7) RecName: Full=ATP-dependent RNA helicase dbp2; ... 107 5e-22
AE017346_128(AE017346|pid:none) Cryptococcus neoformans var. neo... 107 5e-22
(Q5R4I9) RecName: Full=Probable ATP-dependent RNA helicase DDX5;... 106 9e-22
AB451382_1(AB451382|pid:none) Homo sapiens DDX5 mRNA for ATP-dep... 106 9e-22
(Q61656) RecName: Full=Probable ATP-dependent RNA helicase DDX5;... 106 9e-22
AK132779_1(AK132779|pid:none) Mus musculus adult male testis cDN... 106 9e-22
AB170341_1(AB170341|pid:none) Macaca fascicularis brain cDNA clo... 106 9e-22
(Q5B0J9) RecName: Full=ATP-dependent RNA helicase dbp2; ... 106 9e-22
AK297905_1(AK297905|pid:none) Homo sapiens cDNA FLJ59357 complet... 106 9e-22
BC117660_1(BC117660|pid:none) Danio rerio similar to Probable RN... 106 9e-22
BC135355_1(BC135355|pid:none) Xenopus tropicalis hypothetical pr... 106 9e-22
BC134863_1(BC134863|pid:none) Danio rerio similar to Probable RN... 106 9e-22
BX571764_1(BX571764|pid:none) Homo sapiens mRNA; cDNA DKFZp686J0... 106 9e-22
AB169223_1(AB169223|pid:none) Macaca fascicularis testis cDNA, c... 106 9e-22
BC129873_1(BC129873|pid:none) Mus musculus DEAD (Asp-Glu-Ala-Asp... 106 9e-22
BC103318_1(BC103318|pid:none) Bos taurus DEAD (Asp-Glu-Ala-Asp) ... 106 9e-22
(Q92841) RecName: Full=Probable ATP-dependent RNA helicase DDX17... 105 1e-21
AK161012_1(AK161012|pid:none) Mus musculus 15 days embryo head c... 105 1e-21
BC000595_1(BC000595|pid:none) Homo sapiens DEAD (Asp-Glu-Ala-Asp... 105 1e-21
BC151648_1(BC151648|pid:none) Bos taurus DEAD (Asp-Glu-Ala-Asp) ... 105 1e-21
BC151768_1(BC151768|pid:none) Bos taurus DEAD (Asp-Glu-Ala-Asp) ... 105 1e-21
(A6RGE3) RecName: Full=ATP-dependent RNA helicase DBP2; ... 105 2e-21
(Q1DP69) RecName: Full=ATP-dependent RNA helicase DBP2; ... 105 2e-21
BC062910_1(BC062910|pid:none) Mus musculus DEAD (Asp-Glu-Ala-Asp... 104 3e-21
AK135173_1(AK135173|pid:none) Mus musculus 12 days embryo female... 104 3e-21
BC047981_1(BC047981|pid:none) Xenopus laevis similar to DEAD/H (... 104 3e-21
AY060589_1(AY060589|pid:none) Arabidopsis thaliana AT5g63120/MDC... 104 3e-21
AB008265_8(AB008265|pid:none) Arabidopsis thaliana genomic DNA, ... 104 3e-21
(Q8W4R3) RecName: Full=DEAD-box ATP-dependent RNA helicase 30; ... 104 3e-21
AK303049_1(AK303049|pid:none) Homo sapiens cDNA FLJ58652 complet... 103 5e-21
BC082849_1(BC082849|pid:none) Xenopus laevis p68 RNA helicase, m... 103 6e-21
(A5A6J2) RecName: Full=Probable ATP-dependent RNA helicase DDX5;... 103 6e-21
AM910994_603(AM910994|pid:none) Plasmodium knowlesi strain H chr... 103 6e-21
AF218580_1(AF218580|pid:none) Xenopus laevis p68 RNA helicase mR... 103 6e-21
CP000252_2847(CP000252|pid:none) Syntrophus aciditrophicus SB, c... 103 8e-21
BC067585_1(BC067585|pid:none) Danio rerio DEAD (Asp-Glu-Ala-Asp)... 103 8e-21
AY821682_1(AY821682|pid:none) Carassius auratus DEAD-box RNA-dep... 103 8e-21
EU195919_1(EU195919|pid:none) Phytophthora infestans putative RN... 103 8e-21
EF219412_1(EF219412|pid:none) Tetrahymena thermophila Lia2p (LIA... 102 1e-20
AE014298_1133(AE014298|pid:none) Drosophila melanogaster chromos... 102 1e-20
(P24782) RecName: Full=ATP-dependent RNA helicase dbp2; ... 102 2e-20
DQ443224_1(DQ443224|pid:none) Bombyx mori DEAD box polypeptide 5... 101 2e-20
DQ443223_1(DQ443223|pid:none) Bombyx mori DEAD box polypeptide 5... 101 2e-20
AP003244_7(AP003244|pid:none) Oryza sativa Japonica Group genomi... 101 3e-20
AY039237_1(AY039237|pid:none) Homo sapiens DEAD-box protein CAGE... 100 4e-20
(Q86TM3) RecName: Full=Probable ATP-dependent RNA helicase DDX53... 100 4e-20
BC051703_1(BC051703|pid:none) Homo sapiens DEAD (Asp-Glu-Ala-Asp... 100 4e-20
AB264678_1(AB264678|pid:none) Papilio xuthus mRNA for DEAD box p... 100 5e-20
AM456215_2(AM456215|pid:none) Vitis vinifera contig VV78X025685.... 100 9e-20
X52648_1(X52648|pid:none) Schizosaccharomyces pombe p68 gene for... 99 1e-19
BC121888_1(BC121888|pid:none) Xenopus tropicalis DEAD (Asp-Glu-A... 99 1e-19
AF110008_1(AF110008|pid:none) Molgula occulta p68 RNA helicase (... 98 2e-19
AE014297_711(AE014297|pid:none) Drosophila melanogaster chromoso... 98 2e-19
(Q6FS54) RecName: Full=ATP-dependent RNA helicase DBP3; ... 98 2e-19
AE014296_1228(AE014296|pid:none) Drosophila melanogaster chromos... 98 2e-19
AF110007_1(AF110007|pid:none) Molgula oculata p68 RNA helicase (... 98 3e-19
(Q6CT46) RecName: Full=ATP-dependent RNA helicase DBP3; ... 97 7e-19
(Q54IV3) RecName: Full=Probable ATP-dependent RNA helicase ddx42... 96 9e-19
AM422018_155(AM422018|pid:none) Candidatus Phytoplasma australie... 96 2e-18
CR954213_263(CR954213|pid:none) Ostreococcus tauri strain OTTH05... 95 2e-18
(Q26696) RecName: Full=Putative DEAD-box RNA helicase HEL64; ... 95 2e-18
AM459847_1(AM459847|pid:none) Vitis vinifera contig VV78X063071.... 95 2e-18
AE014297_392(AE014297|pid:none) Drosophila melanogaster chromoso... 95 3e-18
(P19109) RecName: Full=ATP-dependent RNA helicase p62; ... 95 3e-18
AE014297_390(AE014297|pid:none) Drosophila melanogaster chromoso... 95 3e-18
S11485(S11485) RNA helicase - fruit fly (Drosophila melanogaster... 95 3e-18
CP000542_4658(CP000542|pid:none) Verminephrobacter eiseniae EF01... 95 3e-18
AB168153_1(AB168153|pid:none) Macaca fascicularis testis cDNA cl... 94 5e-18
CU928180_189(CU928180|pid:none) Kluyveromyces thermotolerans str... 93 8e-18
(O22907) RecName: Full=DEAD-box ATP-dependent RNA helicase 24; ... 93 8e-18
(Q4PDT1) RecName: Full=ATP-dependent RNA helicase DBP3; ... 93 8e-18
(Q755A5) RecName: Full=ATP-dependent RNA helicase DBP3; ... 93 8e-18
CT005272_221(CT005272|pid:none) Leishmania major strain Friedlin... 93 8e-18
FN319675_1(FN319675|pid:none) Schistosoma japonicum isolate Anhu... 93 1e-17
AM502254_469(AM502254|pid:none) Leishmania infantum chromosome 36. 93 1e-17
AM494972_237(AM494972|pid:none) Leishmania braziliensis chromoso... 93 1e-17
FN319674_1(FN319674|pid:none) Schistosoma japonicum isolate Anhu... 93 1e-17
CP000851_1456(CP000851|pid:none) Shewanella pealeana ATCC 700345... 92 1e-17
BC066938_1(BC066938|pid:none) Homo sapiens DEAD (Asp-Glu-Ala-Asp... 92 1e-17
FB905433_1(FB905433|pid:none) Sequence 124706 from Patent WO2008... 92 1e-17
CP001392_1178(CP001392|pid:none) Diaphorobacter sp. TPSY, comple... 92 1e-17
CP001025_2569(CP001025|pid:none) Burkholderia ambifaria MC40-6 c... 92 1e-17
BT062249_1(BT062249|pid:none) Zea mays full-length cDNA clone ZM... 92 1e-17
AM743169_1917(AM743169|pid:none) Stenotrophomonas maltophilia K2... 92 1e-17
CP000440_2713(CP000440|pid:none) Burkholderia ambifaria AMMD chr... 92 1e-17
FB905455_1(FB905455|pid:none) Sequence 124728 from Patent WO2008... 92 1e-17
CP000539_2511(CP000539|pid:none) Acidovorax sp. JS42, complete g... 92 1e-17
CP000151_2809(CP000151|pid:none) Burkholderia sp. 383 chromosome... 92 2e-17
CP000267_2131(CP000267|pid:none) Rhodoferax ferrireducens T118, ... 92 2e-17
CP000958_2678(CP000958|pid:none) Burkholderia cenocepacia MC0-3 ... 92 2e-17
AM747720_934(AM747720|pid:none) Burkholderia cenocepacia J2315 c... 92 2e-17
CP000378_2044(CP000378|pid:none) Burkholderia cenocepacia AU 105... 92 2e-17
CP000482_743(CP000482|pid:none) Pelobacter propionicus DSM 2379,... 91 3e-17
CP001133_187(CP001133|pid:none) Vibrio fischeri MJ11 chromosome ... 91 3e-17
CP000021_155(CP000021|pid:none) Vibrio fischeri ES114 chromosome... 91 3e-17
AL935253_122(AL935253|pid:none) Lactobacillus plantarum strain W... 91 3e-17
CP000362_2914(CP000362|pid:none) Roseobacter denitrificans OCh 1... 91 4e-17
BA000016_862(BA000016|pid:none) Clostridium perfringens str. 13 ... 91 4e-17
CP001327_478(CP001327|pid:none) Micromonas sp. RCC299 chromosome... 91 4e-17
AL583919_245(AL583919|pid:none) Mycobacterium leprae strain TN c... 91 4e-17
(Q8SRB2) RecName: Full=ATP-dependent RNA helicase DBP2; ... 91 4e-17
AP008937_209(AP008937|pid:none) Lactobacillus fermentum IFO 3956... 91 4e-17
CP000450_1616(CP000450|pid:none) Nitrosomonas eutropha C91, comp... 91 5e-17
CP000312_821(CP000312|pid:none) Clostridium perfringens SM101, c... 91 5e-17
(Q5KHB7) RecName: Full=ATP-dependent RNA helicase DBP3; ... 90 7e-17
AF487524_1(AF487524|pid:none) Vibrio fischeri ATP-dependent RNA ... 90 7e-17
BX571864_63(BX571864|pid:none) Photorhabdus luminescens subsp. l... 90 7e-17
CP000094_970(CP000094|pid:none) Pseudomonas fluorescens Pf0-1, c... 90 7e-17
CP000614_2745(CP000614|pid:none) Burkholderia vietnamiensis G4 c... 90 7e-17
AP008217_1499(AP008217|pid:none) Oryza sativa (japonica cultivar... 90 7e-17
EU016567_30(EU016567|pid:none) Uncultured marine microorganism H... 90 7e-17
AP009385_2578(AP009385|pid:none) Burkholderia multivorans ATCC 1... 90 7e-17
(A7TJ36) RecName: Full=ATP-dependent RNA helicase DBP3; ... 90 9e-17
CP000884_2893(CP000884|pid:none) Delftia acidovorans SPH-1, comp... 90 9e-17
(Q887N8) RecName: Full=ATP-dependent RNA helicase rhlB; ... 90 9e-17
CP000939_651(CP000939|pid:none) Clostridium botulinum B1 str. Ok... 90 9e-17
CP000233_346(CP000233|pid:none) Lactobacillus salivarius UCC118,... 90 9e-17
CP000058_1083(CP000058|pid:none) Pseudomonas syringae pv. phaseo... 90 9e-17
AL445063_293(AL445063|pid:none) Thermoplasma acidophilum complet... 90 9e-17
CP000592_44(CP000592|pid:none) Ostreococcus lucimarinus CCE9901 ... 90 9e-17
AM412317_641(AM412317|pid:none) Clostridium botulinum A str. ATC... 90 9e-17
AM910996_435(AM910996|pid:none) Plasmodium knowlesi strain H chr... 90 9e-17
CP000075_1069(CP000075|pid:none) Pseudomonas syringae pv. syring... 90 9e-17
CR940352_788(CR940352|pid:none) Theileria annulata strain Ankara... 90 9e-17
CP000588_315(CP000588|pid:none) Ostreococcus lucimarinus CCE9901... 89 1e-16
CP001157_1090(CP001157|pid:none) Azotobacter vinelandii DJ, comp... 89 1e-16
AM494944_37(AM494944|pid:none) Leishmania braziliensis chromosom... 89 1e-16
CT573326_4211(CT573326|pid:none) Pseudomonas entomophila str. L4... 89 1e-16
CP000931_1533(CP000931|pid:none) Shewanella halifaxensis HAW-EB4... 89 1e-16
AM181176_974(AM181176|pid:none) Pseudomonas fluorescens SBW25 co... 89 2e-16
CP000896_409(CP000896|pid:none) Acholeplasma laidlawii PG-8A, co... 89 2e-16
(P20447) RecName: Full=ATP-dependent RNA helicase DBP3; ... 89 2e-16
CR954208_313(CR954208|pid:none) Ostreococcus tauri strain OTTH05... 89 2e-16
CP001068_2376(CP001068|pid:none) Ralstonia pickettii 12J chromos... 89 2e-16
(A6ZUA1) RecName: Full=ATP-dependent RNA helicase DBP3; ... 89 2e-16
CT005246_36(CT005246|pid:none) Leishmania major strain Friedlin,... 89 2e-16
CP001323_621(CP001323|pid:none) Micromonas sp. RCC299 chromosome... 89 2e-16
(P0C2M6) RecName: Full=ATP-dependent RNA helicase ded1; ... 89 2e-16
CP000304_1164(CP000304|pid:none) Pseudomonas stutzeri A1501, com... 89 2e-16
(A2QI25) RecName: Full=ATP-dependent RNA helicase ded1; ... 89 2e-16
CP000744_1233(CP000744|pid:none) Pseudomonas aeruginosa PA7, com... 89 2e-16
(Q2UGK3) RecName: Full=ATP-dependent RNA helicase ded1; ... 89 2e-16
(B7UUT0) RecName: Full=ATP-dependent RNA helicase rhlB; ... 89 2e-16
(A5DAC8) RecName: Full=ATP-dependent RNA helicase DBP3; ... 88 3e-16
EU955920_1(EU955920|pid:none) Zea mays clone 1552463 pre-mRNA-pr... 88 3e-16
AF045641_1(AF045641|pid:none) Caenorhabditis elegans cosmid F53H... 88 3e-16
AM260479_2644(AM260479|pid:none) Ralstonia eutropha H16 chromoso... 88 3e-16
CP000124_904(CP000124|pid:none) Burkholderia pseudomallei 1710b ... 88 3e-16
CP000148_2542(CP000148|pid:none) Geobacter metallireducens GS-15... 88 3e-16
BX571965_705(BX571965|pid:none) Burkholderia pseudomallei strain... 88 3e-16
CP000546_2332(CP000546|pid:none) Burkholderia mallei NCTC 10229 ... 88 3e-16
(Q88NB7) RecName: Full=ATP-dependent RNA helicase rhlB; ... 88 3e-16
CP000885_1978(CP000885|pid:none) Clostridium phytofermentans ISD... 88 3e-16
CP000950_3677(CP000950|pid:none) Yersinia pseudotuberculosis YPI... 88 3e-16
CP000712_4373(CP000712|pid:none) Pseudomonas putida F1, complete... 88 3e-16
CP000680_3538(CP000680|pid:none) Pseudomonas mendocina ymp, comp... 88 3e-16
CP001083_643(CP001083|pid:none) Clostridium botulinum Ba4 str. 6... 88 3e-16
(Q5VQL1) RecName: Full=DEAD-box ATP-dependent RNA helicase 14; ... 88 3e-16
AE008922_587(AE008922|pid:none) Xanthomonas campestris pv. campe... 88 3e-16
CP000489_1723(CP000489|pid:none) Paracoccus denitrificans PD1222... 88 3e-16
CU695239_158(CU695239|pid:none) Ralstonia solanacearum strain Mo... 88 3e-16
CU633749_2152(CU633749|pid:none) Cupriavidus taiwanensis str. LM... 88 3e-16
AM889285_3225(AM889285|pid:none) Gluconacetobacter diazotrophicu... 88 3e-16
AM039952_3733(AM039952|pid:none) Xanthomonas campestris pv. vesi... 88 3e-16
AM942759_3393(AM942759|pid:none) Proteus mirabilis strain HI4320... 88 3e-16
FP236842_367(FP236842|pid:none) Erwinia pyrifoliae strain Ep1/96... 87 4e-16
CP001052_3249(CP001052|pid:none) Burkholderia phytofirmans PsJN ... 87 4e-16
(A1CXK7) RecName: Full=ATP-dependent RNA helicase ded1; ... 87 4e-16
CP000517_221(CP000517|pid:none) Lactobacillus helveticus DPC 457... 87 4e-16
CP000448_1836(CP000448|pid:none) Syntrophomonas wolfei subsp. wo... 87 4e-16
AL646052_2209(AL646052|pid:none) Ralstonia solanacearum GMI1000 ... 87 4e-16
CP001575_427(CP001575|pid:none) Micromonas sp. RCC299 chromosome... 87 4e-16
AI0423(AI0423) cold-shock dead-box protein A [imported] - Yersin... 87 6e-16
AM452377_2(AM452377|pid:none) Vitis vinifera contig VV78X261484.... 87 6e-16
FM211050_25(FM211050|pid:none) Photorhabdus asymbiotica subsp. a... 87 6e-16
CP000009_190(CP000009|pid:none) Gluconobacter oxydans 621H, comp... 87 6e-16
CP000783_3459(CP000783|pid:none) Enterobacter sakazakii ATCC BAA... 87 6e-16
CP000090_896(CP000090|pid:none) Ralstonia eutropha JMP134 chromo... 87 6e-16
CP000377_927(CP000377|pid:none) Silicibacter sp. TM1040, complet... 87 6e-16
(Q5JKF2) RecName: Full=DEAD-box ATP-dependent RNA helicase 40; ... 87 7e-16
CP000411_1488(CP000411|pid:none) Oenococcus oeni PSU-1, complete... 87 7e-16
AL954747_2041(AL954747|pid:none) Nitrosomonas europaea ATCC 1971... 87 7e-16
CP000653_3567(CP000653|pid:none) Enterobacter sp. 638, complete ... 87 7e-16
(Q4I7K4) RecName: Full=ATP-dependent RNA helicase DED1; ... 87 7e-16
CP000891_1356(CP000891|pid:none) Shewanella baltica OS195, compl... 87 7e-16
CP000698_1609(CP000698|pid:none) Geobacter uraniireducens Rf4, c... 87 7e-16
CP000753_1304(CP000753|pid:none) Shewanella baltica OS185, compl... 87 7e-16
CP001252_2961(CP001252|pid:none) Shewanella baltica OS223, compl... 87 7e-16
CP000961_1729(CP000961|pid:none) Shewanella woodyi ATCC 51908, c... 87 7e-16
CP000469_2909(CP000469|pid:none) Shewanella sp. ANA-3, complete ... 87 7e-16
CP001503_2886(CP001503|pid:none) Burkholderia glumae BGR1 chromo... 86 1e-15
CP000510_3019(CP000510|pid:none) Psychromonas ingrahamii 37, com... 86 1e-15
CP000388_415(CP000388|pid:none) Pseudoalteromonas atlantica T6c,... 86 1e-15
CP000822_4434(CP000822|pid:none) Citrobacter koseri ATCC BAA-895... 86 1e-15
AE014075_3826(AE014075|pid:none) Escherichia coli CFT073, comple... 86 1e-15
(Q8XA87) RecName: Full=Cold-shock DEAD box protein A; E... 86 1e-15
CP000243_3526(CP000243|pid:none) Escherichia coli UTI89, complet... 86 1e-15
CP000453_1600(CP000453|pid:none) Alkalilimnicola ehrlichii MLHE-... 86 1e-15
CP001113_3310(CP001113|pid:none) Salmonella enterica subsp. ente... 86 1e-15
(P0A9P6) RecName: Full=Cold-shock DEAD box protein A; E... 86 1e-15
CU928164_3636(CU928164|pid:none) Escherichia coli IAI39 chromoso... 86 1e-15
(Q0UY62) RecName: Full=ATP-dependent RNA helicase DBP3; ... 86 1e-15
AP009179_1435(AP009179|pid:none) Sulfurovum sp. NBC37-1 genomic ... 86 1e-15
AB0901(AB0901) ATP-dependent RNA helicase (dead-box protein) [im... 86 1e-15
M63288_1(M63288|pid:none) E.coli deaD gene, complete cds. 86 1e-15
AE005674_3205(AE005674|pid:none) Shigella flexneri 2a str. 301, ... 86 1e-15
AM933172_3101(AM933172|pid:none) Salmonella enterica subsp. ente... 86 1e-15
CU928160_3221(CU928160|pid:none) Escherichia coli IAI1 chromosom... 86 1e-15
AM933173_3060(AM933173|pid:none) Salmonella enterica subsp. ente... 86 1e-15
EU894953_1(EU894953|pid:none) Escherichia coli strain TB182A ind... 86 1e-15
CP000614_2376(CP000614|pid:none) Burkholderia vietnamiensis G4 c... 86 1e-15
(Q9P6U9) RecName: Full=ATP-dependent RNA helicase ded-1; ... 86 1e-15
AY912129_1(AY912129|pid:none) Lactobacillus sanfranciscensis ATP... 86 1e-15
CR378675_199(CR378675|pid:none) Photobacterium profundum SS9 chr... 86 1e-15
(A7EJY3) RecName: Full=ATP-dependent RNA helicase ded1; ... 86 1e-15
AD2863(AD2863) dead-box ATP-dependent RNA helicase rhlE [importe... 86 1e-15
CP001056_3425(CP001056|pid:none) Clostridium botulinum B str. Ek... 86 1e-15
AF2395(AF2395) ATP-dependent RNA helicase [imported] - Nostoc sp... 86 1e-15
CP001052_1212(CP001052|pid:none) Burkholderia phytofirmans PsJN ... 86 1e-15
CP001252_1519(CP001252|pid:none) Shewanella baltica OS223, compl... 86 1e-15
CP001229_1425(CP001229|pid:none) Sulfurihydrogenibium azorense A... 86 1e-15
CP000082_943(CP000082|pid:none) Psychrobacter arcticus 273-4, co... 86 1e-15
AM260479_529(AM260479|pid:none) Ralstonia eutropha H16 chromosom... 86 1e-15
CP000563_2748(CP000563|pid:none) Shewanella baltica OS155, compl... 86 1e-15
CP000891_2922(CP000891|pid:none) Shewanella baltica OS195, compl... 86 1e-15
(A6SEH9) RecName: Full=ATP-dependent RNA helicase ded1; ... 86 1e-15
CU633749_483(CU633749|pid:none) Cupriavidus taiwanensis str. LMG... 86 1e-15
AF199442_1(AF199442|pid:none) Methanococcoides burtonii DEAD-box... 86 1e-15
CR555306_2076(CR555306|pid:none) Azoarcus sp. EbN1 complete geno... 86 1e-15
CP001078_3210(CP001078|pid:none) Clostridium botulinum E3 str. A... 86 1e-15
(Q8K9H6) RecName: Full=Cold-shock DEAD box protein A homolog; ... 86 2e-15
AF542976_3(AF542976|pid:none) Yersinia enterocolitica PNPase (pn... 86 2e-15
CP000563_3694(CP000563|pid:none) Shewanella baltica OS155, compl... 86 2e-15
CP001157_346(CP001157|pid:none) Azotobacter vinelandii DJ, compl... 86 2e-15
CR954246_2904(CR954246|pid:none) Pseudoalteromonas haloplanktis ... 86 2e-15
CP000681_1246(CP000681|pid:none) Shewanella putrefaciens CN-32, ... 86 2e-15
BX842646_296(BX842646|pid:none) Bdellovibrio bacteriovorus compl... 86 2e-15
BX640452_7(BX640452|pid:none) Bordetella bronchiseptica strain R... 86 2e-15
JX0314(JX0314) DEAD box protein - Klebsiella pneumoniae &L08387... 86 2e-15
CP000323_1469(CP000323|pid:none) Psychrobacter cryohalolentis K5... 86 2e-15
CP000503_2814(CP000503|pid:none) Shewanella sp. W3-18-1, complet... 86 2e-15
BX640436_143(BX640436|pid:none) Bordetella parapertussis strain ... 86 2e-15
CP000891_573(CP000891|pid:none) Shewanella baltica OS195, comple... 86 2e-15
BX640411_169(BX640411|pid:none) Bordetella pertussis strain Toha... 86 2e-15
(Q10202) RecName: Full=ATP-dependent RNA helicase dbp3; ... 85 2e-15
FM954973_753(FM954973|pid:none) Vibrio splendidus LGP32 chromoso... 85 2e-15
(Q6YS30) RecName: Full=DEAD-box ATP-dependent RNA helicase 5; ... 85 2e-15
CP000116_1101(CP000116|pid:none) Thiobacillus denitrificans ATCC... 85 2e-15
CP000503_3496(CP000503|pid:none) Shewanella sp. W3-18-1, complet... 85 2e-15
CR555306_2554(CR555306|pid:none) Azoarcus sp. EbN1 complete geno... 85 2e-15
AB110202_1(AB110202|pid:none) Oryza sativa Japonica Group mRNA f... 85 2e-15
CP000416_486(CP000416|pid:none) Lactobacillus brevis ATCC 367, c... 85 2e-15
CP000086_975(CP000086|pid:none) Burkholderia thailandensis E264 ... 85 2e-15
AM920437_1907(AM920437|pid:none) Penicillium chrysogenum Wiscons... 85 2e-15
CR940352_511(CR940352|pid:none) Theileria annulata strain Ankara... 85 2e-15
AE015928_1885(AE015928|pid:none) Bacteroides thetaiotaomicron VP... 85 2e-15
CP000576_1209(CP000576|pid:none) Prochlorococcus marinus str. MI... 85 2e-15
AE009442_143(AE009442|pid:none) Xylella fastidiosa Temecula1, co... 85 2e-15
CP000117_640(CP000117|pid:none) Anabaena variabilis ATCC 29413, ... 85 2e-15
AE017180_907(AE017180|pid:none) Geobacter sulfurreducens PCA, co... 85 2e-15
AE003849_192(AE003849|pid:none) Xylella fastidiosa 9a5c, complet... 85 2e-15
U81597_1(U81597|pid:none) Leishmania amazonensis ATP-dependent R... 85 2e-15
AM039952_2587(AM039952|pid:none) Xanthomonas campestris pv. vesi... 85 2e-15
CP001503_2521(CP001503|pid:none) Burkholderia glumae BGR1 chromo... 85 3e-15
CR954246_1880(CR954246|pid:none) Pseudoalteromonas haloplanktis ... 85 3e-15
CP000282_618(CP000282|pid:none) Saccharophagus degradans 2-40, c... 85 3e-15
(P57453) RecName: Full=Cold-shock DEAD box protein A homolog; ... 85 3e-15
CP000551_1204(CP000551|pid:none) Prochlorococcus marinus str. AS... 85 3e-15
CP000316_3461(CP000316|pid:none) Polaromonas sp. JS666, complete... 85 3e-15
CP000413_256(CP000413|pid:none) Lactobacillus gasseri ATCC 33323... 85 3e-15
AE016825_2841(AE016825|pid:none) Chromobacterium violaceum ATCC ... 85 3e-15
(A1CH78) RecName: Full=ATP-dependent RNA helicase ded1; ... 85 3e-15
BX950851_709(BX950851|pid:none) Erwinia carotovora subsp. atrose... 85 3e-15
DQ019638_1(DQ019638|pid:none) Triticum aestivum DEAD-box ATPase-... 84 4e-15
CP000825_1234(CP000825|pid:none) Prochlorococcus marinus str. MI... 84 4e-15
CP000749_197(CP000749|pid:none) Marinomonas sp. MWYL1, complete ... 84 4e-15
AE017198_273(AE017198|pid:none) Lactobacillus johnsonii NCC 533,... 84 4e-15
AE008922_2242(AE008922|pid:none) Xanthomonas campestris pv. camp... 84 4e-15
CP000868_957(CP000868|pid:none) Burkholderia multivorans ATCC 17... 84 4e-15
CP000529_1232(CP000529|pid:none) Polaromonas naphthalenivorans C... 84 4e-15
AC024810_3(AC024810|pid:none) Caenorhabditis elegans cosmid Y54E... 84 4e-15
FM992688_926(FM992688|pid:none) Candida dubliniensis CD36 chromo... 84 4e-15
CP000510_1471(CP000510|pid:none) Psychromonas ingrahamii 37, com... 84 4e-15
CP001016_1747(CP001016|pid:none) Beijerinckia indica subsp. indi... 84 4e-15
AP008955_5641(AP008955|pid:none) Brevibacillus brevis NBRC 10059... 84 4e-15
CP000352_456(CP000352|pid:none) Ralstonia metallidurans CH34, co... 84 4e-15
(Q5APT8) RecName: Full=ATP-dependent RNA helicase DBP3; ... 84 4e-15
CP000472_1591(CP000472|pid:none) Shewanella piezotolerans WP3, c... 84 5e-15
CP000117_1948(CP000117|pid:none) Anabaena variabilis ATCC 29413,... 84 5e-15
CP000414_1504(CP000414|pid:none) Leuconostoc mesenteroides subsp... 84 5e-15
CP000681_2480(CP000681|pid:none) Shewanella putrefaciens CN-32, ... 84 5e-15
AE016828_581(AE016828|pid:none) Coxiella burnetii RSA 493, compl... 84 5e-15
CP000681_2923(CP000681|pid:none) Shewanella putrefaciens CN-32, ... 84 5e-15
AE017354_2080(AE017354|pid:none) Legionella pneumophila subsp. p... 84 5e-15
CP001279_1502(CP001279|pid:none) Nautilia profundicola AmH, comp... 84 5e-15
CP000440_2346(CP000440|pid:none) Burkholderia ambifaria AMMD chr... 84 5e-15
AF188678_1(AF188678|pid:none) Pisum sativum P72 DEAD box protein... 84 5e-15
CP000612_2250(CP000612|pid:none) Desulfotomaculum reducens MI-1,... 84 5e-15
FM178380_565(FM178380|pid:none) Aliivibrio salmonicida LFI1238 c... 84 5e-15
AM902716_92(AM902716|pid:none) Bordetella petrii strain DSM 1280... 84 6e-15
AM286415_2746(AM286415|pid:none) Yersinia enterocolitica subsp. ... 84 6e-15
CP000446_743(CP000446|pid:none) Shewanella sp. MR-4, complete ge... 84 6e-15
AP008230_3754(AP008230|pid:none) Desulfitobacterium hafniense Y5... 84 6e-15
CP001336_1574(CP001336|pid:none) Desulfitobacterium hafniense DC... 84 6e-15
CP000655_600(CP000655|pid:none) Polynucleobacter necessarius sub... 84 6e-15
AM398681_1649(AM398681|pid:none) Flavobacterium psychrophilum JI... 84 6e-15
CP000444_3252(CP000444|pid:none) Shewanella sp. MR-7, complete g... 84 6e-15
CP000774_2471(CP000774|pid:none) Parvibaculum lavamentivorans DS... 84 6e-15
AE017042_944(AE017042|pid:none) Yersinia pestis biovar Microtus ... 84 6e-15
(Q1DJF0) RecName: Full=ATP-dependent RNA helicase DED1; ... 84 6e-15
BX936398_1214(BX936398|pid:none) Yersinia pseudotuberculosis IP3... 84 6e-15
AF426171_17(AF426171|pid:none) Yersinia pestis transposase (tnp)... 84 6e-15
CP001124_3557(CP001124|pid:none) Geobacter bemidjiensis Bem, com... 84 6e-15
AM747720_2408(AM747720|pid:none) Burkholderia cenocepacia J2315 ... 83 8e-15
AE004439_1112(AE004439|pid:none) Pasteurella multocida subsp. mu... 83 8e-15
CU861906_545(CU861906|pid:none) Ralstonia solanacearum strain Mo... 83 8e-15
CP001600_447(CP001600|pid:none) Edwardsiella ictaluri 93-146, co... 83 8e-15
CP001600_2527(CP001600|pid:none) Edwardsiella ictaluri 93-146, c... 83 8e-15
CP000447_3679(CP000447|pid:none) Shewanella frigidimarina NCIMB ... 83 8e-15
CP000378_1692(CP000378|pid:none) Burkholderia cenocepacia AU 105... 83 8e-15
(A3LQ01) RecName: Full=ATP-dependent RNA helicase DED1; ... 83 8e-15
CP000034_3099(CP000034|pid:none) Shigella dysenteriae Sd197, com... 83 8e-15
BA000012_268(BA000012|pid:none) Mesorhizobium loti MAFF303099 DN... 83 8e-15
CP000487_756(CP000487|pid:none) Campylobacter fetus subsp. fetus... 83 8e-15
CP001103_1486(CP001103|pid:none) Alteromonas macleodii 'Deep eco... 83 8e-15
CP000089_3281(CP000089|pid:none) Dechloromonas aromatica RCB, co... 83 8e-15
AP007281_235(AP007281|pid:none) Lactobacillus reuteri JCM 1112 D... 83 1e-14
T19974(T19974) hypothetical protein C46F11.4 - Caenorhabditis el... 83 1e-14
AE016853_4945(AE016853|pid:none) Pseudomonas syringae pv. tomato... 83 1e-14
CP000075_458(CP000075|pid:none) Pseudomonas syringae pv. syringa... 83 1e-14
AM260522_1236(AM260522|pid:none) Helicobacter acinonychis str. S... 83 1e-14
CP000753_2779(CP000753|pid:none) Shewanella baltica OS185, compl... 83 1e-14
CP000269_1297(CP000269|pid:none) Janthinobacterium sp. Marseille... 83 1e-14
CR628337_2050(CR628337|pid:none) Legionella pneumophila str. Len... 83 1e-14
AB063484_1(AB063484|pid:none) Oryzias latipes olvas mRNA for VAS... 83 1e-14
EU559167_80(EU559167|pid:none) Candidatus Nitrospira defluvii Co... 83 1e-14
CP000462_2340(CP000462|pid:none) Aeromonas hydrophila subsp. hyd... 83 1e-14
CP000480_1873(CP000480|pid:none) Mycobacterium smegmatis str. MC... 83 1e-14
CP000671_352(CP000671|pid:none) Haemophilus influenzae PittEE, c... 83 1e-14
(A5E058) RecName: Full=Pre-mRNA-processing ATP-dependent RNA hel... 83 1e-14
CP000058_438(CP000058|pid:none) Pseudomonas syringae pv. phaseol... 83 1e-14
AE014299_3677(AE014299|pid:none) Shewanella oneidensis MR-1, com... 83 1e-14
CP000560_443(CP000560|pid:none) Bacillus amyloliquefaciens FZB42... 82 1e-14
CP001111_480(CP001111|pid:none) Stenotrophomonas maltophilia R55... 82 1e-14
DQ174775_1(DQ174775|pid:none) Monopterus albus vasa-like protein... 82 1e-14
CP000656_4648(CP000656|pid:none) Mycobacterium gilvum PYR-GCK, c... 82 1e-14
CP000644_2098(CP000644|pid:none) Aeromonas salmonicida subsp. sa... 82 1e-14
AF428313_1(AF428313|pid:none) Arabidopsis thaliana AT3g01540/F4P... 82 1e-14
CP000478_1438(CP000478|pid:none) Syntrophobacter fumaroxidans MP... 82 1e-14
CP000423_2419(CP000423|pid:none) Lactobacillus casei ATCC 334, c... 82 1e-14
AY062591_1(AY062591|pid:none) Arabidopsis thaliana RNA helicase,... 82 1e-14
(Q2HBE7) RecName: Full=ATP-dependent RNA helicase DED1; ... 82 1e-14
AK065849_1(AK065849|pid:none) Oryza sativa Japonica Group cDNA c... 82 1e-14
FM992690_630(FM992690|pid:none) Candida dubliniensis CD36 chromo... 82 1e-14
CP000817_4123(CP000817|pid:none) Lysinibacillus sphaericus C3-41... 82 1e-14
CP000302_3007(CP000302|pid:none) Shewanella denitrificans OS217,... 82 1e-14
(Q8H136) RecName: Full=DEAD-box ATP-dependent RNA helicase 14; ... 82 1e-14
CP000854_1334(CP000854|pid:none) Mycobacterium marinum M, comple... 82 1e-14
CP000252_3108(CP000252|pid:none) Syntrophus aciditrophicus SB, c... 82 1e-14
CP000159_43(CP000159|pid:none) Salinibacter ruber DSM 13855, com... 82 1e-14
AP008209_3131(AP008209|pid:none) Oryza sativa (japonica cultivar... 82 1e-14
AP008957_4094(AP008957|pid:none) Rhodococcus erythropolis PR4 DN... 82 1e-14
BT000795_1(BT000795|pid:none) Arabidopsis thaliana putative RNA ... 82 1e-14
CP000462_718(CP000462|pid:none) Aeromonas hydrophila subsp. hydr... 82 1e-14
CP001252_869(CP001252|pid:none) Shewanella baltica OS223, comple... 82 2e-14
CP000681_3087(CP000681|pid:none) Shewanella putrefaciens CN-32, ... 82 2e-14
CP000961_3492(CP000961|pid:none) Shewanella woodyi ATCC 51908, c... 82 2e-14
CP001072_242(CP001072|pid:none) Helicobacter pylori Shi470, comp... 82 2e-14
AP008229_2561(AP008229|pid:none) Xanthomonas oryzae pv. oryzae M... 82 2e-14
CP000884_2407(CP000884|pid:none) Delftia acidovorans SPH-1, comp... 82 2e-14
CP000390_1414(CP000390|pid:none) Mesorhizobium sp. BNC1, complet... 82 2e-14
AY809821_1(AY809821|pid:none) Schistosoma japonicum SJCHGC07150 ... 82 2e-14
CP001022_2890(CP001022|pid:none) Exiguobacterium sibiricum 255-1... 82 2e-14
CR954208_359(CR954208|pid:none) Ostreococcus tauri strain OTTH05... 82 2e-14
CP000563_3408(CP000563|pid:none) Shewanella baltica OS155, compl... 82 2e-14
AM295007_695(AM295007|pid:none) Streptococcus pyogenes Manfredo ... 82 2e-14
CP000769_3459(CP000769|pid:none) Anaeromyxobacter sp. Fw109-5, c... 82 2e-14
CU640366_940(CU640366|pid:none) Podospora anserina genomic DNA c... 82 2e-14
CP000116_1733(CP000116|pid:none) Thiobacillus denitrificans ATCC... 82 2e-14
BA000035_1257(BA000035|pid:none) Corynebacterium efficiens YS-31... 82 2e-14
CP000302_3296(CP000302|pid:none) Shewanella denitrificans OS217,... 82 2e-14
CP000316_2315(CP000316|pid:none) Polaromonas sp. JS666, complete... 82 2e-14
CR954207_169(CR954207|pid:none) Ostreococcus tauri strain OTTH05... 82 2e-14
CP000557_198(CP000557|pid:none) Geobacillus thermodenitrificans ... 82 2e-14
CP000803_1032(CP000803|pid:none) Francisella tularensis subsp. h... 82 2e-14
CP000241_251(CP000241|pid:none) Helicobacter pylori HPAG1, compl... 82 2e-14
CP000672_613(CP000672|pid:none) Haemophilus influenzae PittGG, c... 82 2e-14
AE001439_231(AE001439|pid:none) Helicobacter pylori J99, complet... 82 2e-14
CP001089_3483(CP001089|pid:none) Geobacter lovleyi SZ, complete ... 82 2e-14
CP001068_410(CP001068|pid:none) Ralstonia pickettii 12J chromoso... 82 2e-14
AB429237_1(AB429237|pid:none) Dicyema japonicum gene for DEAD bo... 82 2e-14
CP000302_1173(CP000302|pid:none) Shewanella denitrificans OS217,... 82 2e-14
CP000469_803(CP000469|pid:none) Shewanella sp. ANA-3, complete g... 82 2e-14
(Q7L014) RecName: Full=Probable ATP-dependent RNA helicase DDX46... 82 2e-14
CP000446_3118(CP000446|pid:none) Shewanella sp. MR-4, complete g... 82 2e-14
CP001191_2861(CP001191|pid:none) Rhizobium leguminosarum bv. tri... 82 2e-14
(Q6CKI1) RecName: Full=Pre-mRNA-processing ATP-dependent RNA hel... 82 2e-14
AB047384_1(AB047384|pid:none) Ephydatia fluviatilis mRNA for PL1... 82 2e-14
BX248345_91(BX248345|pid:none) Mycobacterium bovis subsp. bovis ... 82 2e-14
AB018344_1(AB018344|pid:none) Homo sapiens mRNA for KIAA0801 pro... 82 2e-14
(A3LQ55) RecName: Full=Pre-mRNA-processing ATP-dependent RNA hel... 82 2e-14
BC092240_1(BC092240|pid:none) Mus musculus DEAD (Asp-Glu-Ala-Asp... 82 2e-14
CP000821_1020(CP000821|pid:none) Shewanella sediminis HAW-EB3, c... 82 2e-14
AF106680_1(AF106680|pid:none) Homo sapiens RNA helicase mRNA, co... 82 2e-14
CP000588_361(CP000588|pid:none) Ostreococcus lucimarinus CCE9901... 82 2e-14
AM167904_3340(AM167904|pid:none) Bordetella avium 197N complete ... 82 2e-14
CP000934_1661(CP000934|pid:none) Cellvibrio japonicus Ueda107, c... 82 2e-14
(Q6BU54) RecName: Full=ATP-dependent RNA helicase DED1; ... 82 2e-14
(Q569Z5) RecName: Full=Probable ATP-dependent RNA helicase DDX46... 82 2e-14
CP000783_2484(CP000783|pid:none) Enterobacter sakazakii ATCC BAA... 82 2e-14
AK291788_1(AK291788|pid:none) Homo sapiens cDNA FLJ78679 complet... 82 2e-14
AP011115_6097(AP011115|pid:none) Rhodococcus opacus B4 DNA, comp... 82 2e-14
CP000851_3481(CP000851|pid:none) Shewanella pealeana ATCC 700345... 82 2e-14
BA000032_583(BA000032|pid:none) Vibrio parahaemolyticus RIMD 221... 81 3e-14
X03039_3(X03039|pid:none) Mouse mRNA for initiation factor eIF-4... 81 3e-14
CP001078_3157(CP001078|pid:none) Clostridium botulinum E3 str. A... 81 3e-14
FJ441603_1(FJ441603|pid:none) Halocynthia roretzi vasa mRNA, com... 81 3e-14
AK228819_1(AK228819|pid:none) Arabidopsis thaliana mRNA for DRH1... 81 3e-14
AK135752_1(AK135752|pid:none) Mus musculus in vitro fertilized e... 81 3e-14
X03039_2(X03039|pid:none) Mouse mRNA for initiation factor eIF-4... 81 3e-14
AM181176_5603(AM181176|pid:none) Pseudomonas fluorescens SBW25 c... 81 3e-14
CP000563_3406(CP000563|pid:none) Shewanella baltica OS155, compl... 81 3e-14
(Q4TVV3) RecName: Full=Probable ATP-dependent RNA helicase DDX46... 81 3e-14
AK166439_1(AK166439|pid:none) Mus musculus mammary gland RCB-052... 81 3e-14
BC006380_1(BC006380|pid:none) Homo sapiens cDNA clone IMAGE:4099... 81 3e-14
(P60842) RecName: Full=Eukaryotic initiation factor 4A-I; ... 81 3e-14
BX548174_1267(BX548174|pid:none) Prochlorococcus marinus MED4 co... 81 3e-14
(P29562) RecName: Full=Eukaryotic initiation factor 4A-I; ... 81 3e-14
AY891106_1(AY891106|pid:none) Synthetic construct Homo sapiens c... 81 3e-14
AY891107_1(AY891107|pid:none) Synthetic construct Homo sapiens c... 81 3e-14
CP000094_5278(CP000094|pid:none) Pseudomonas fluorescens Pf0-1, ... 81 3e-14
AK169156_1(AK169156|pid:none) Mus musculus 17 days embryo stomac... 81 3e-14
CP000387_672(CP000387|pid:none) Streptococcus sanguinis SK36, co... 81 3e-14
CP000675_2175(CP000675|pid:none) Legionella pneumophila str. Cor... 81 3e-14
CP000753_851(CP000753|pid:none) Shewanella baltica OS185, comple... 81 3e-14
CP000454_3026(CP000454|pid:none) Arthrobacter sp. FB24, complete... 81 3e-14
(A5DZE6) RecName: Full=ATP-dependent RNA helicase DED1; ... 81 3e-14
CP000248_1287(CP000248|pid:none) Novosphingobium aromaticivorans... 81 3e-14
AK289453_1(AK289453|pid:none) Homo sapiens cDNA FLJ78614 complet... 81 3e-14
AK291971_1(AK291971|pid:none) Homo sapiens cDNA FLJ78244 complet... 81 3e-14
FM954973_316(FM954973|pid:none) Vibrio splendidus LGP32 chromoso... 81 3e-14
FB905427_1(FB905427|pid:none) Sequence 124700 from Patent WO2008... 81 3e-14
CP000931_3556(CP000931|pid:none) Shewanella halifaxensis HAW-EB4... 81 3e-14
AL163792_10(AL163792|pid:none) Arabidopsis thaliana DNA chromoso... 81 3e-14
AK152210_1(AK152210|pid:none) Mus musculus bone marrow macrophag... 81 3e-14
(P96614) RecName: Full=DEAD-box ATP-dependent RNA helicase cshA;... 81 4e-14
CP000076_5708(CP000076|pid:none) Pseudomonas fluorescens Pf-5, c... 81 4e-14
CP001616_598(CP001616|pid:none) Tolumonas auensis DSM 9187, comp... 81 4e-14
BA000004_2384(BA000004|pid:none) Bacillus halodurans C-125 DNA, ... 81 4e-14
CP000380_542(CP000380|pid:none) Burkholderia cenocepacia AU 1054... 81 4e-14
AB032467_1(AB032467|pid:none) Oreochromis niloticus mRNA for vas... 81 4e-14
CP001390_2718(CP001390|pid:none) Geobacter sp. FRC-32, complete ... 81 4e-14
CP001601_1025(CP001601|pid:none) Corynebacterium aurimucosum ATC... 81 4e-14
AE008692_1214(AE008692|pid:none) Zymomonas mobilis subsp. mobili... 81 4e-14
AY423380_1(AY423380|pid:none) Crassostrea gigas vasa-like protei... 81 4e-14
AE004092_1084(AE004092|pid:none) Streptococcus pyogenes M1 GAS, ... 81 4e-14
AE014074_1079(AE014074|pid:none) Streptococcus pyogenes MGAS315,... 81 4e-14
DQ452383_1(DQ452383|pid:none) Chlamys farreri vasa mRNA, complet... 81 4e-14
CU468135_2251(CU468135|pid:none) Erwinia tasmaniensis strain ET1... 81 4e-14
AB052858_1(AB052858|pid:none) Enterococcus faecium gene for auto... 81 4e-14
EU955721_1(EU955721|pid:none) Zea mays clone 1543332 nucleolar R... 81 4e-14
S53814(S53814) DEAD box protein - slime mold (Dictyostelium disc... 81 4e-14
AE014299_3921(AE014299|pid:none) Shewanella oneidensis MR-1, com... 81 4e-14
CP000685_4534(CP000685|pid:none) Flavobacterium johnsoniae UW101... 81 4e-14
CP000851_2993(CP000851|pid:none) Shewanella pealeana ATCC 700345... 81 4e-14
CP000431_5979(CP000431|pid:none) Rhodococcus jostii RHA1, comple... 81 4e-14
BA000016_1396(BA000016|pid:none) Clostridium perfringens str. 13... 81 4e-14
FP236842_2383(FP236842|pid:none) Erwinia pyrifoliae strain Ep1/9... 81 4e-14
CP000103_2635(CP000103|pid:none) Nitrosospira multiformis ATCC 2... 81 4e-14
AC115598_49(AC115598|pid:none) Dictyostelium discoideum chromoso... 81 4e-14
(Q75B50) RecName: Full=ATP-dependent RNA helicase DED1; ... 81 4e-14

>(Q54CD6) RecName: Full=Probable ATP-dependent RNA helicase ddx5;
EC=3.6.1.-; AltName: Full=DEAD box protein 5;
Length = 697

Score = 270 bits (689), Expect = 5e-71
Identities = 138/138 (100%), Positives = 138/138 (100%)
Frame = +2

Query: 347 KTSVIYGGISKNLQIEQLEKEKPQILISTPGRLIEMIENGHVDLSSVTMLVLDEADKMLS 526
KTSVIYGGISKNLQIEQLEKEKPQILISTPGRLIEMIENGHVDLSSVTMLVLDEADKMLS
Sbjct: 321 KTSVIYGGISKNLQIEQLEKEKPQILISTPGRLIEMIENGHVDLSSVTMLVLDEADKMLS 380

Query: 527 KGLIPQLKQIRGQIRPDSQNILFSATFPDSLKEVSKDWIKDPSIRLRIGSSELPKLNHIQ 706
KGLIPQLKQIRGQIRPDSQNILFSATFPDSLKEVSKDWIKDPSIRLRIGSSELPKLNHIQ
Sbjct: 381 KGLIPQLKQIRGQIRPDSQNILFSATFPDSLKEVSKDWIKDPSIRLRIGSSELPKLNHIQ 440

Query: 707 QDAQLIAHHKKPRALIKL 760
QDAQLIAHHKKPRALIKL
Sbjct: 441 QDAQLIAHHKKPRALIKL 458

Lambda K H
0.318 0.134 0.401

Gapped
Lambda K H
0.267 0.0410 0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3236559
Number of Hits to DB: 1,112,948,841
Number of extensions: 19896751
Number of successful extensions: 49619
Number of sequences better than 10.0: 3201
Number of HSP's gapped: 48395
Number of HSP's successfully gapped: 3203
Length of query: 254
Length of database: 1,051,180,864
Length adjustment: 126
Effective length of query: 128
Effective length of database: 643,374,430
Effective search space: 82351927040
Effective search space used: 82351927040
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 31 (16.5 bits)

PSORT

psg: 0.88 gvh: 0.51 alm: 0.46 top: 0.43 tms: 0.00 mit: 0.36 mip: 0.02
nuc: 0.03 erl: 0.00 erm: 0.40 pox: 0.00 px2: 0.00 vac: 0.00 rnp: 0.00
act: 0.00 caa: 0.00 yqr: 0.00 tyr: 0.00 leu: 0.00 gpi: 0.00 myr: 0.00
dna: 0.12 rib: 0.00 bac: 0.00 m1a: 0.00 m1b: 0.00 m2 : 0.00 mNt: 0.00
m3a: 0.00 m3b: 0.00 m_ : 1.00

32.0 %: nuclear
28.0 %: cytoplasmic
16.0 %: mitochondrial
8.0 %: cytoskeletal
8.0 %: vacuolar
4.0 %: peroxisomal
4.0 %: endoplasmic reticulum

>> prediction for Contig-U14874-1 is nuc

VS (DIR, S) 0
VH (FL, L) 1
VF (FL, S) 0
AH (FL, L) 0
AF (FL, S) 0
SL (DIR, L) 0
SS (DIR, S) 0
SH (FL, L) 0
SF (FL, S) 0
CH (FL, L) 0
CF (FL, S) 0
FCL (DIR, L) 0
FC (DIR, S) 0
FC-IC (SUB) 0