| Contig-U14806-1 |
| Contig ID |
Contig-U14806-1 |
| Contig update |
2002.12.18 |
| Contig sequence |
 |
| Gap |
no gap |
| Contig length |
731 |
| Chromosome number (1..6, M) |
2 |
| Chromosome length |
8467578 |
| Start point |
1234654 |
| End point |
1234856 |
| Strand (PLUS/MINUS) |
PLUS |
| Number of clones |
17 |
| Number of EST |
25 |
| Link to clone list |
U14806 |
| List of clone(s) |
|
| Translated Amino Acid sequence |
|
| Translated Amino Acid sequence (All Frames) |
|
| own update |
2004. 6.10 |
| Homology vs CSM-cDNA |
|
| dna update |
2009. 1. 1 |
| Homology vs DNA |
|
| protein update |
2009. 7.12 |
| Homology vs Protein |
Query= Contig-U14806-1 (Contig-U14806-1Q) /CSM_Contig/Contig-U14806-1Q.Seq.d
(731 letters)
Database: nrp_B
3,236,559 sequences; 1,051,180,864 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC116963_42(AC116963|pid:none) Dictyostelium discoideum chromoso... 87 7e-16
AC116920_20(AC116920|pid:none) Dictyostelium discoideum chromoso... 82 2e-14
AC116920_24(AC116920|pid:none) Dictyostelium discoideum chromoso... 80 7e-14
AC116920_25(AC116920|pid:none) Dictyostelium discoideum chromoso... 78 2e-13
AC116982_41(AC116982|pid:none) Dictyostelium discoideum chromoso... 72 1e-11
AC116960_61(AC116960|pid:none) Dictyostelium discoideum chromoso... 72 2e-11
AC116967_7(AC116967|pid:none) Dictyostelium discoideum chromosom... 65 3e-09
AC116967_8(AC116967|pid:none) Dictyostelium discoideum chromosom... 65 3e-09
AC117081_43(AC117081|pid:none) Dictyostelium discoideum chromoso... 64 5e-09
AC116984_28(AC116984|pid:none) Dictyostelium discoideum chromoso... 64 6e-09
AC117075_64(AC117075|pid:none) Dictyostelium discoideum chromoso... 62 2e-08
AC116956_34(AC116956|pid:none) Dictyostelium discoideum chromoso... 60 5e-08
AC117081_39(AC117081|pid:none) Dictyostelium discoideum chromoso... 59 1e-07
AC116100_9(AC116100|pid:none) Dictyostelium discoideum chromosom... 55 2e-06
AB010266_2(AB010266|pid:none) Mus musculus Creb-rp, Tnx, Cyp21 g... 50 6e-05
(Q9UMG7) RecName: Full=Tenascin-X; Short=TN-X; AltName:... 50 7e-05
AL049547_2(AL049547|pid:none) Human DNA sequence from clone RP1-... 50 7e-05
AL645922_24(AL645922|pid:none) Human DNA sequence from clone XXb... 50 7e-05
X71923_1(X71923|pid:none) H.sapiens XB gene for tenascin-X, exon... 50 7e-05
AL773560_5(AL773560|pid:none) Pig DNA sequence from clone PigI-5... 49 2e-04
AC117075_41(AC117075|pid:none) Dictyostelium discoideum chromoso... 47 6e-04
X08030_1(X08030|pid:none) Chicken mRNA fragment for tenascin (cT... 46 0.001
J03641_1(J03641|pid:none) Chicken cytotactin mRNA, partial cds, ... 46 0.001
EU596506_1(EU596506|pid:none) Rattus norvegicus tenascin C (Tnc)... 46 0.001
AC116957_104(AC116957|pid:none) Dictyostelium discoideum chromos... 45 0.002
(Q80YX1) RecName: Full=Tenascin; Short=TN; AltName: Ful... 45 0.003
AL732556_3(AL732556|pid:none) Mouse DNA sequence from clone RP24... 45 0.003
AL732556_1(AL732556|pid:none) Mouse DNA sequence from clone RP24... 45 0.003
BX004856_1(BX004856|pid:none) Zebrafish DNA sequence from clone ... 44 0.004
BC163556_1(BC163556|pid:none) Danio rerio tenascin C, mRNA (cDNA... 44 0.004
AB210038_1(AB210038|pid:none) Homo sapiens mRNA for TNC variant ... 44 0.004
DQ096731_1(DQ096731|pid:none) Danio rerio tenascin-C (TNC) mRNA,... 44 0.004
(P78509) RecName: Full=Reelin; EC=3.4.21.-; Flags: Prec... 44 0.004
M24630_1(M24630|pid:none) Human hexabrachion mRNA, partial cds. 44 0.004
(P24821) RecName: Full=Tenascin; Short=TN; AltName: Ful... 44 0.004
X56160_1(X56160|pid:none) Human mRNA for tenascin. 44 0.004
BC151843_1(BC151843|pid:none) Homo sapiens tenascin C, mRNA (cDN... 44 0.004
(Q8I7T3) RecName: Full=Substrate-adhesion molecule; Flags: Precu... 44 0.004
AK304015_1(AK304015|pid:none) Homo sapiens cDNA FLJ60213 complet... 44 0.004
AY568568_1(AY568568|pid:none) Bos taurus reelin (RELN) mRNA, par... 44 0.005
AC117076_37(AC117076|pid:none) Dictyostelium discoideum chromoso... 44 0.005
BC129830_1(BC129830|pid:none) Homo sapiens tenascin R (restricti... 44 0.007
X98085_1(X98085|pid:none) H.sapiens mRNA for tenascin-R. 44 0.007
AK295823_1(AK295823|pid:none) Homo sapiens cDNA FLJ60578 complet... 44 0.007
(Q8BYI9) RecName: Full=Tenascin-R; Short=TN-R; AltName:... 44 0.007
(Q05546) RecName: Full=Tenascin-R; Short=TN-R; AltName:... 44 0.007
BC132392_1(BC132392|pid:none) Mus musculus tenascin R, mRNA (cDN... 44 0.007
Z94055_1(Z94055|pid:none) Human DNA sequence from clone RP1-24M1... 44 0.007
AY286489_1(AY286489|pid:none) Danio rerio tenascin-R mRNA, compl... 43 0.009
S58870(S58870;S71844;I49297)reelin precursor - mouse 43 0.012
(Q60841) RecName: Full=Reelin; EC=3.4.21.-; AltName: Fu... 43 0.012
AY650356_1(AY650356|pid:none) Macaca fascicularis reelin mRNA, p... 42 0.015
AB062680_1(AB062680|pid:none) Rattus norvegicus Reln mRNA for re... 42 0.015
AB072425_1(AB072425|pid:none) Oryzias latipes Reln mRNA for reel... 42 0.020
AJ506968_3(AJ506968|pid:none) Takifugu rubripes aif1, csnk2B, cy... 42 0.026
CP000592_153(CP000592|pid:none) Ostreococcus lucimarinus CCE9901... 42 0.026
CP001327_152(CP001327|pid:none) Micromonas sp. RCC299 chromosome... 41 0.044
AF090951_1(AF090951|pid:none) Lacerta viridis reelin (reln) mRNA... 40 0.057
AJ580920_1(AJ580920|pid:none) Mus musculus mRNA for tenascin-W p... 40 0.057
AM231718_1(AM231718|pid:none) Gallus gallus mRNA for tenascin-W ... 40 0.057
(Q80Z71) RecName: Full=Tenascin-N; Short=TN-N; Flags: P... 40 0.057
BC138335_1(BC138335|pid:none) Mus musculus tenascin N, mRNA (cDN... 40 0.057
BC071284_1(BC071284|pid:none) Danio rerio tenascin W, mRNA (cDNA... 40 0.075
AK067994_1(AK067994|pid:none) Oryza sativa Japonica Group cDNA c... 40 0.075
AF008227_1(AF008227|pid:none) Drosophila melanogaster odd Oz pro... 40 0.075
AE014296_3877(AE014296|pid:none) Drosophila melanogaster chromos... 40 0.075
A54148(A54148)odz protein - fruit fly (Drosophila sp.) 40 0.075
AE014296_3878(AE014296|pid:none) Drosophila melanogaster chromos... 40 0.075
AF427524_1(AF427524|pid:none) Danio rerio reelin (reln) mRNA, pa... 40 0.098
(Q9W6V6) RecName: Full=Teneurin-1; Short=Ten-1; AltName... 39 0.13
T34431(T34431) hypothetical protein K06A9.3 - Caenorhabditis ele... 39 0.13
BC155681_1(BC155681|pid:none) Xenopus tropicalis hypothetical pr... 39 0.13
AC117080_18(AC117080|pid:none) Dictyostelium discoideum chromoso... 39 0.13
EU854565_1(EU854565|pid:none) Danio rerio fibrillin 4 (fbn4) mRN... 39 0.17
T21694(T21694)hypothetical protein F33C8.1 - Caenorhabditis eleg... 39 0.17
(Q19981) RecName: Full=Putative protein tag-53; Flags: Precursor... 39 0.17
AY334001_1(AY334001|pid:none) Anopheles gambiae isolate 4aRR__1 ... 39 0.17
A39321(A39321) mucin - rat (fragment) &M76740_1(M76740|pid:none) 39 0.17
AJ566620_1(AJ566620|pid:none) Paramecium tetraurelia macronuclea... 39 0.17
Z69790_3(Z69790|pid:none) Caenorhabditis elegans Cosmid F33C8, c... 39 0.17
BC140783_1(BC140783|pid:none) Homo sapiens odz, odd Oz/ten-m hom... 38 0.28
FN357292_136(FN357292|pid:none) Schistosoma mansoni genome seque... 38 0.28
AF100772_1(AF100772|pid:none) Homo sapiens tenascin-M1 (TNM1) mR... 38 0.28
BC144305_1(BC144305|pid:none) Homo sapiens cDNA clone MGC:177842... 38 0.28
BC144543_1(BC144543|pid:none) Homo sapiens odz, odd Oz/ten-m hom... 38 0.28
AB268588_38(AB268588|pid:none) Gallus gallus genes, MHC region, ... 38 0.28
Y18468_1(Y18468|pid:none) Suberites domuncula mRNA for integrin ... 38 0.28
(Q9WTS4) RecName: Full=Teneurin-1; Short=Ten-1; AltName... 38 0.28
T42635(T42635) tenascin Y precursor, variant 206.5K - chicken &... 38 0.28
AK127044_1(AK127044|pid:none) Homo sapiens cDNA FLJ45101 fis, cl... 38 0.28
AL049689_1(AL049689|pid:none) Novel human mRNA from chromosome 1... 38 0.28
(Q9UQP3) RecName: Full=Tenascin-N; Short=TN-N; Flags: P... 38 0.28
AK297459_1(AK297459|pid:none) Homo sapiens cDNA FLJ51503 complet... 38 0.37
AK017094_1(AK017094|pid:none) Mus musculus adult male testis cDN... 38 0.37
Z66566_5(Z66566|pid:none) Caenorhabditis elegans Cosmid T25C12, ... 38 0.37
BC095744_1(BC095744|pid:none) Danio rerio integrin, beta-like 1,... 38 0.37
D63520_1(D63520|pid:none) Mouse reeler mRNA, complete cds. 38 0.37
AF463419_1(AF463419|pid:none) Naegleria gruberi basal body prote... 38 0.37
AB287420_1(AB287420|pid:none) Achaearanea tepidariorum At-Delta ... 38 0.37
AK293863_1(AK293863|pid:none) Homo sapiens cDNA FLJ51504 complet... 38 0.37
AE014298_1834(AE014298|pid:none) Drosophila melanogaster chromos... 37 0.48
AF195418_1(AF195418|pid:none) Mus musculus ODZ3 (Odz3) mRNA, par... 37 0.48
X68794_1(X68794|pid:none) Drosophila melanogaster mRNA for type ... 37 0.48
BX571731_2(BX571731|pid:none) Zebrafish DNA sequence from clone ... 37 0.48
BC146617_1(BC146617|pid:none) Xenopus tropicalis odz, odd Oz/ten... 37 0.48
(Q9WTS6) RecName: Full=Teneurin-3; Short=Ten-3; AltName... 37 0.48
(Q9W7R4) RecName: Full=Teneurin-3; Short=Ten-3; AltName... 37 0.63
AB025413_1(AB025413|pid:none) Mus musculus mRNA for Ten-m4, comp... 37 0.63
(Q6N022) RecName: Full=Teneurin-4; Short=Ten-4; AltName... 37 0.63
CP001326_294(CP001326|pid:none) Micromonas sp. RCC299 chromosome... 37 0.63
(Q3UHK6) RecName: Full=Teneurin-4; Short=Ten-4; AltName... 37 0.63
CR388098_1(CR388098|pid:none) Zebrafish DNA sequence from clone ... 37 0.63
I51530(I51530) integrin beta-3 subunit - African clawed frog &L... 37 0.63
AK147329_1(AK147329|pid:none) Mus musculus cDNA, RIKEN full-leng... 37 0.63
BX324137_1(BX324137|pid:none) Zebrafish DNA sequence from clone ... 37 0.63
AE014134_513(AE014134|pid:none) Drosophila melanogaster chromoso... 37 0.83
BC168968_1(BC168968|pid:none) Rattus norvegicus N-acetylglucosam... 37 0.83
AY704216_1(AY704216|pid:none) Mus musculus reelin (Reln) mRNA, p... 37 0.83
BX537264_1(BX537264|pid:none) Zebrafish DNA sequence from clone ... 37 0.83
(Q9W6F8) RecName: Full=Wnt inhibitory factor 1; Short=W... 37 0.83
BC154909_1(BC154909|pid:none) Xenopus tropicalis WNT inhibitory ... 37 0.83
BC091959_1(BC091959|pid:none) Danio rerio wnt inhibitory factor ... 36 1.1
AY630342_1(AY630342|pid:none) Manduca sexta plasmatocyte-specifi... 36 1.1
AX133531_1(AX133531|pid:none) Sequence 1 from Patent WO0131011. 36 1.1
T21011(T21011)hypothetical protein F16B12.2 - Caenorhabditis ele... 36 1.1
Z81064_2(Z81064|pid:none) Caenorhabditis elegans Cosmid F16B12, ... 36 1.1
CP001325_100(CP001325|pid:none) Micromonas sp. RCC299 chromosome... 36 1.1
(Q9DER5) RecName: Full=Teneurin-2; Short=Ten-2; AltName... 36 1.4
BT003436_1(BT003436|pid:none) Drosophila melanogaster SD04095 fu... 36 1.4
(Q54JA4) RecName: Full=Integrin beta-like protein D; Flags: Prec... 36 1.4
AK304737_1(AK304737|pid:none) Homo sapiens cDNA FLJ61597 partial... 36 1.4
AL807754_1(AL807754|pid:none) Zebrafish DNA sequence from clone ... 36 1.4
CT033773_2(CT033773|pid:none) Mouse DNA sequence from clone RP23... 35 1.8
A38308(A38308;A35775;S12534;S11708) integrin beta-5 chain precur... 35 1.8
AK170219_1(AK170219|pid:none) Mus musculus NOD-derived CD11c +ve... 35 1.8
(P18084) RecName: Full=Integrin beta-5; Flags: Precursor; &BC00... 35 1.8
BC004048_1(BC004048|pid:none) Mus musculus Wnt inhibitory factor... 35 1.8
(Q9P273) RecName: Full=Teneurin-3; Short=Ten-3; AltName... 35 1.8
AY892655_1(AY892655|pid:none) Synthetic construct Homo sapiens c... 35 1.8
AK140251_1(AK140251|pid:none) Mus musculus adult male corpora qu... 35 1.8
BC139895_1(BC139895|pid:none) Danio rerio integrin, beta 5, mRNA... 35 1.8
AK315429_1(AK315429|pid:none) Homo sapiens cDNA, FLJ96485, highl... 35 1.8
AF468059_1(AF468059|pid:none) Bos taurus integrin beta 5 subunit... 35 1.8
DQ871216_1(DQ871216|pid:none) Bos taurus integrin beta 5 mRNA, c... 35 1.8
AX079975_1(AX079975|pid:none) Sequence 9 from Patent WO0105825. 35 1.8
JC2005(JC2005)integrin beta-5 chain - baboon 35 1.8
(Q27591) RecName: Full=Integrin beta-nu; Flags: Precursor; &AE0... 35 1.8
AK032158_1(AK032158|pid:none) Mus musculus adult male olfactory ... 35 1.8
AF135060_1(AF135060|pid:none) Rattus norvegicus fibrillin-2 mRNA... 35 1.8
AJ437480_3(AJ437480|pid:none) Paramecium tetraurelia partial npe... 35 1.8
(Q8BJ48) RecName: Full=N-acetylglucosamine-1-phosphodiester alph... 35 1.8
CP000587_387(CP000587|pid:none) Ostreococcus lucimarinus CCE9901... 35 1.8
AK155450_1(AK155450|pid:none) Mus musculus NOD-derived CD11c +ve... 35 1.8
AK047014_1(AK047014|pid:none) Mus musculus 10 days neonate cereb... 35 1.8
AF187073_1(AF187073|pid:none) Mus musculus N-acetylglucosamine-1... 35 1.8
(P26012) RecName: Full=Integrin beta-8; Flags: Precursor; &A410... 35 2.4
AK297744_1(AK297744|pid:none) Homo sapiens cDNA FLJ60311 complet... 35 2.4
BX323857_1(BX323857|pid:none) Mouse DNA sequence from clone RP23... 35 2.4
AF427525_1(AF427525|pid:none) Xenopus laevis reelin (reln) mRNA,... 35 2.4
BC085618_1(BC085618|pid:none) Mus musculus perlecan (heparan sul... 35 2.4
AK298571_1(AK298571|pid:none) Homo sapiens cDNA FLJ59733 complet... 35 2.4
AK095875_1(AK095875|pid:none) Homo sapiens cDNA FLJ38556 fis, cl... 35 2.4
(Q9W7R3) RecName: Full=Teneurin-4; Short=Ten-4; AltName... 35 2.4
AX133821_1(AX133821|pid:none) Sequence 7 from Patent WO0119856. 35 2.4
(Q05793) RecName: Full=Basement membrane-specific heparan sulfat... 35 2.4
(Q5M9B3) RecName: Full=Integrin beta-like protein 1; Flags: Prec... 35 2.4
(P26013) RecName: Full=Integrin beta-8; Flags: Precursor; &B410... 35 2.4
X98852_1(X98852|pid:none) P.leniusculus mRNA for integrin beta s... 35 2.4
AK295044_1(AK295044|pid:none) Homo sapiens cDNA FLJ60530 complet... 35 2.4
(Q54JA3) RecName: Full=Integrin beta-like protein E; Flags: Prec... 35 2.4
BT011693_1(BT011693|pid:none) Arabidopsis thaliana At3g57630 gen... 35 2.4
DQ022377_1(DQ022377|pid:none) Danio rerio beta 4 integrin mRNA, ... 35 2.4
M31039_1(M31039|pid:none) Mus musculus complement receptor 3 bet... 35 2.4
BC046744_1(BC046744|pid:none) Xenopus laevis Integrin beta-like ... 35 2.4
AC115598_37(AC115598|pid:none) Dictyostelium discoideum chromoso... 35 3.1
AE014134_308(AE014134|pid:none) Drosophila melanogaster chromoso... 35 3.1
(Q9Y5W5) RecName: Full=Wnt inhibitory factor 1; Short=W... 35 3.1
DQ917572_1(DQ917572|pid:none) Parhyale hawaiensis notch protein ... 35 3.1
U00046_2(U00046|pid:none) Caenorhabditis elegans cosmid R13F6, c... 35 3.1
AB154832_1(AB154832|pid:none) Halocynthia roretzi HrITGB2 mRNA f... 35 3.1
(Q9QYP2) RecName: Full=Cadherin EGF LAG seven-pass G-type recept... 35 3.1
EF619494_1(EF619494|pid:none) Cervus elaphus notch-related Wnt i... 35 3.1
FN357711_14(FN357711|pid:none) Schistosoma mansoni genome sequen... 35 3.1
AB206835_1(AB206835|pid:none) Caenorhabditis elegans ten-1 mRNA ... 35 3.1
AE014134_309(AE014134|pid:none) Drosophila melanogaster chromoso... 35 3.1
(Q6IN38) RecName: Full=Wnt inhibitory factor 1; Short=W... 35 3.1
T16743(T16743)hypothetical protein R13F6.4 - Caenorhabditis eleg... 35 3.1
A59180(A59180) Wnt inhibitory factor-1 - human &AF122922_1(AF12... 35 3.1
U00046_1(U00046|pid:none) Caenorhabditis elegans cosmid R13F6, c... 35 3.1
AK301818_1(AK301818|pid:none) Homo sapiens cDNA FLJ54458 complet... 35 3.1
BC018037_1(BC018037|pid:none) Homo sapiens WNT inhibitory factor... 35 3.1
EU273942_1(EU273942|pid:none) Amphimedon queenslandica notch mRN... 35 3.1
AF005357_1(AF005357|pid:none) Ophlitaspongia tenuis integrin sub... 34 4.1
A49175(A49175;PH1570;S32113) Motch B protein - mouse (fragment) ... 34 4.1
AK155137_1(AK155137|pid:none) Mus musculus NOD-derived CD11c +ve... 34 4.1
AM442061_1(AM442061|pid:none) Vitis vinifera contig VV78X087658.... 34 4.1
(Q9W6F9) RecName: Full=Wnt inhibitory factor 1; Short=W... 34 4.1
AF315556_1(AF315556|pid:none) Caenorhabditis remanei notch-like ... 34 4.1
BC172642_1(BC172642|pid:none) Synthetic construct Mus musculus c... 34 4.1
AK176188_1(AK176188|pid:none) Arabidopsis thaliana mRNA for majo... 34 4.1
AF491524_1(AF491524|pid:none) Caenorhabditis remanei strain EM46... 34 4.1
BC134676_1(BC134676|pid:none) Bos taurus integrin, beta 7, mRNA ... 34 4.1
AF193046_1(AF193046|pid:none) Homo sapiens PP187 mRNA, complete ... 34 4.1
CP000595_187(CP000595|pid:none) Ostreococcus lucimarinus CCE9901... 34 4.1
AY810920_1(AY810920|pid:none) Schistosoma japonicum SJCHGC06221 ... 34 4.1
CR954212_161(CR954212|pid:none) Ostreococcus tauri strain OTTH05... 34 4.1
AE014298_1598(AE014298|pid:none) Drosophila melanogaster chromos... 34 4.1
BC143738_1(BC143738|pid:none) Homo sapiens integrin, beta 4, mRN... 34 5.4
Y11128_1(Y11128|pid:none) D.melanogaster mRNA for C901 protein. 34 5.4
(P16144) RecName: Full=Integrin beta-4; AltName: Full=GP150; Alt... 34 5.4
A36429(S12380;S08465;A36429;S06963;B33534)integrin beta-4 chain ... 34 5.4
AM463622_2(AM463622|pid:none) Vitis vinifera contig VV78X244153.... 34 5.4
AF011375_1(AF011375|pid:none) Homo sapiens integrin variant beta... 34 5.4
BT072095_1(BT072095|pid:none) Salmo salar clone ssal-rgf-511-120... 34 5.4
AY845260_1(AY845260|pid:none) Mytilus edulis clone 2 foot protei... 34 5.4
BC118139_1(BC118139|pid:none) Bos taurus WNT inhibitory factor 1... 34 5.4
Z81110_2(Z81110|pid:none) Caenorhabditis elegans Cosmid T01D3, c... 34 5.4
BC126411_1(BC126411|pid:none) Homo sapiens integrin, beta 4, mRN... 34 5.4
CP001323_444(CP001323|pid:none) Micromonas sp. RCC299 chromosome... 34 5.4
AK304792_1(AK304792|pid:none) Homo sapiens cDNA FLJ60224 complet... 34 5.4
U66541_2(U66541|pid:none) Human beta4-integrin (ITGB4) and alter... 34 5.4
BC118916_1(BC118916|pid:none) Homo sapiens integrin, beta 4, mRN... 34 5.4
AC096673_18(AC096673|pid:none) Trypanosoma brucei chromosome 3 c... 34 5.4
AY581198_1(AY581198|pid:none) Bos taurus integrin beta 5 (ITGB5)... 34 5.4
(Q9QYP0) RecName: Full=Multiple epidermal growth factor-like dom... 34 5.4
AB173680_1(AB173680|pid:none) Macaca fascicularis brain cDNA clo... 34 5.4
AB259320_1(AB259320|pid:none) Felis catus SELL mRNA for selectin... 34 5.4
(P13508) RecName: Full=Protein glp-1; Flags: Precursor; &A32901... 34 5.4
T22945(T22945;T24295)hypothetical protein T01D3.1 - Caenorhabdit... 34 5.4
X52186_1(X52186|pid:none) Human mRNA for integrin beta-4 subunit. 34 5.4
X53587_1(X53587|pid:none) Human mRNA for integrin beta 4. 34 5.4
BC109238_1(BC109238|pid:none) Homo sapiens integrin, beta 4, mRN... 34 5.4
AF531101_1(AF531101|pid:none) Bos taurus attractin mRNA, complet... 33 7.0
(Q9WU60) RecName: Full=Attractin; AltName: Full=Protein mahogany... 33 7.0
AF218910_1(AF218910|pid:none) Homo sapiens attractin precursor (... 33 7.0
M64549_1(M64549|pid:none) Mouse lymphocyte homing receptor (MEL-... 33 7.0
M33753_1(M33753|pid:none) D.melanogaster crumbs protein mRNA, co... 33 7.0
AF106861_1(AF106861|pid:none) Homo sapiens attractin-2 (ATRN) mR... 33 7.0
AB353767_1(AB353767|pid:none) Mus musculus Sell mRNA for L-selec... 33 7.0
(P68827) RecName: Full=N-acetylglucosamine-1-phosphodiester alph... 33 7.0
A26547(A26547;A32532;S65439) platelet glycoprotein IIIa beta cha... 33 7.0
AB013074_1(AB013074|pid:none) Cyprinus carpio mRNA for integrin ... 33 7.0
A60798(A60798;A36085;D32528;C32528;A36268)platelet glycoprotein ... 33 7.0
U03272_1(U03272|pid:none) Human fibrillin-2 mRNA, complete cds. 33 7.0
AY074792_1(AY074792|pid:none) Strongylocentrotus purpuratus delt... 33 7.0
AL109805_2(AL109805|pid:none) Human DNA sequence from clone RP4-... 33 7.0
FN357468_8(FN357468|pid:none) Schistosoma mansoni genome sequenc... 33 7.0
U95204_1(U95204|pid:none) Homo sapiens platelet membrane glycopr... 33 7.0
(P10040) RecName: Full=Protein crumbs; AltName: Full=95F; Flags:... 33 7.0
BT070410_1(BT070410|pid:none) Picea sitchensis clone WS02727_L02... 33 7.0
BC152016_1(BC152016|pid:none) Danio rerio cDNA clone IMAGE:81055... 33 7.0
AB038388_1(AB038388|pid:none) Rattus norvegicus Atrn mRNA for at... 33 7.0
AK300424_1(AK300424|pid:none) Homo sapiens cDNA FLJ58126 complet... 33 7.0
A54105(A54105;S17063;S31101)fibrillin-2 precursor - human 33 7.0
(Q3UV74) RecName: Full=Integrin beta-2-like protein; AltName: Fu... 33 7.0
AE014134_2979(AE014134|pid:none) Drosophila melanogaster chromos... 33 7.0
(Q9VJB6) RecName: Full=Putative neural-cadherin 2; AltName: Full... 33 7.0
EU867790_1(EU867790|pid:none) Camelus bactrianus integrin subuni... 33 7.0
I77349(I77349;F56793) platelet glycoprotein IIIa precursor - hum... 33 7.0
BC139487_1(BC139487|pid:none) Danio rerio slit (Drosophila) homo... 33 7.0
AB062913_1(AB062913|pid:none) Mesocricetus auratus Atrn mRNA for... 33 7.0
(Q9NTQ3) RecName: Full=Attractin; AltName: Full=Mahogany homolog... 33 7.0
BC141054_1(BC141054|pid:none) Mus musculus attractin, mRNA (cDNA... 33 7.0
(P18337) RecName: Full=L-selectin; AltName: Full=Lymph node homi... 33 7.0
AL833771_1(AL833771|pid:none) Mouse DNA sequence from clone RP23... 33 7.0
(Q61555) RecName: Full=Fibrillin-2; Flags: Precursor; &A57278(A... 33 7.0
AF218915_1(AF218915|pid:none) Homo sapiens attractin precursor (... 33 7.0
B36268(B36268;A33907)platelet glycoprotein IIIa-II - human (frag... 33 7.0
AY999064_1(AY999064|pid:none) Equus caballus platelet glycoprote... 33 7.0
AL607108_2(AL607108|pid:none) Mouse DNA sequence from clone RP23... 33 9.1
AL645912_4(AL645912|pid:none) Mouse DNA sequence from clone RP23... 33 9.1
(Q64632) RecName: Full=Integrin beta-4; AltName: Full=GP150; Alt... 33 9.1
AB052948_1(AB052948|pid:none) Homo sapiens mRNA for SREC-3, comp... 33 9.1
(Q7TN16) RecName: Full=Hedgehog-interacting protein; Sh... 33 9.1
(Q9WTS5) RecName: Full=Teneurin-2; Short=Ten-2; AltName... 33 9.1
AK291810_1(AK291810|pid:none) Homo sapiens cDNA FLJ78719 complet... 33 9.1
BC141361_1(BC141361|pid:none) Mus musculus odd Oz/ten-m homolog ... 33 9.1
BC163207_1(BC163207|pid:none) Danio rerio integrin beta 3b, mRNA... 33 9.1
AF491521_1(AF491521|pid:none) Caenorhabditis remanei strain CR10... 33 9.1
DQ178646_1(DQ178646|pid:none) Danio rerio integrin beta 3.1 (itg... 33 9.1
AK172116_1(AK172116|pid:none) Mus musculus activated spleen cDNA... 33 9.1
AK074051_1(AK074051|pid:none) Homo sapiens mRNA for FLJ00122 pro... 33 9.1
AJ295695_1(AJ295695|pid:none) Homo sapiens mRNA for stabilin-2 (... 33 9.1
AE014134_1453(AE014134|pid:none) Drosophila melanogaster chromos... 33 9.1
CS319972_1(CS319972|pid:none) Sequence 5 from Patent WO200605935... 33 9.1
DQ440587_1(DQ440587|pid:none) Danio rerio truncated integrin bet... 33 9.1
AL607108_4(AL607108|pid:none) Mouse DNA sequence from clone RP23... 33 9.1
JN0786(JN0786)integrin beta-4 chain precursor - mouse 33 9.1
AB038782_1(AB038782|pid:none) Homo sapiens MUC3A gene for intest... 33 9.1
DQ440590_1(DQ440590|pid:none) Danio rerio clone IMAGE:7001749 be... 33 9.1
BC053012_1(BC053012|pid:none) Mus musculus Hedgehog-interacting ... 33 9.1
AF116865_1(AF116865|pid:none) Mus musculus hedgehog-interacting ... 33 9.1
AF491525_1(AF491525|pid:none) Caenorhabditis remanei strain PB20... 33 9.1
AF491520_1(AF491520|pid:none) Caenorhabditis remanei strain PB20... 33 9.1
AL133021_1(AL133021|pid:none) Homo sapiens mRNA; cDNA DKFZp434E0... 33 9.1
AJ245710_1(AJ245710|pid:none) Mus musculus partial mRNA for tene... 33 9.1
AY680441_1(AY680441|pid:none) Macaca mulatta clone ds2_d18_t7_03... 33 9.1
AF086609_1(AF086609|pid:none) Rattus norvegicus neurestin gamma ... 33 9.1
AB052958_1(AB052958|pid:none) Homo sapiens mRNA for FELE-2, comp... 33 9.1
AF086610_1(AF086610|pid:none) Rattus norvegicus neurestin delta ... 33 9.1
(Q8WWQ8) RecName: Full=Stabilin-2; AltName: Full=Fasciclin, EGF-... 33 9.1
AF491523_1(AF491523|pid:none) Caenorhabditis remanei strain CR21... 33 9.1
DQ440589_1(DQ440589|pid:none) Danio rerio truncated integrin bet... 33 9.1
AK161754_1(AK161754|pid:none) Mus musculus adult male thymus cDN... 33 9.1
>AC116963_42(AC116963|pid:none) Dictyostelium discoideum chromosome 2
map 4657875-4914984 strain AX4, complete sequence.
Length = 1501
Score = 86.7 bits (213), Expect = 7e-16
Identities = 44/122 (36%), Positives = 67/122 (54%), Gaps = 3/122 (2%)
Frame = +1
Query: 205 DCSTKKIQVYSIFPSYTDGGEVIFYGWFT-ANSPISILIGSQTCTPTLVTTDQIKCNIGA 381
+C+T + SI P T GG+V YGWF+ + +++ IG C + T + I C + A
Sbjct: 1089 NCTTPIHYLSSIDPCTTSGGQVTIYGWFSNQHINLTVTIGGVECVDPIETENTIICELPA 1148
Query: 382 GNGVKDISITQAGYTWFSPNSYEYVIRPTTPANCPTNCSNRGYC--GAGRCVCDFGYWGD 555
G+G KD++ITQ G ++ N ++Y+ +T CP +CSN G C G C C Y G
Sbjct: 1149 GSGTKDVNITQNGSSFIGKNKFQYI---STVFKCPKDCSNHGKCDTSIGVCTCSSDYSGF 1205
Query: 556 NC 561
+C
Sbjct: 1206 DC 1207
Score = 33.1 bits (74), Expect = 9.1
Identities = 30/104 (28%), Positives = 42/104 (40%), Gaps = 10/104 (9%)
Frame = +1
Query: 280 GWFTANSPISILIGSQTCTPTLVTTD--QIKCNIG--AGNGVKDISITQAGYTWFSPNSY 447
GW T N I TC V +D I C + +G+G D ++ Q +S+
Sbjct: 890 GWGTCNYQTGIC----TCDANRVGSDCSGISCPVSDCSGHGYCDTTVGQCN----CDSSH 941
Query: 448 EYVIRPTTPANCPTN----CSNRGYCG--AGRCVCDFGYWGDNC 561
+ +CPT+ CS G C G C CD G G +C
Sbjct: 942 QGAGCEMDLVSCPTSNKAICSGWGTCNNQTGSCTCDIGRVGADC 985
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3236559
Number of Hits to DB: 831,643,938
Number of extensions: 16043048
Number of successful extensions: 42866
Number of sequences better than 10.0: 304
Number of HSP's gapped: 42570
Number of HSP's successfully gapped: 743
Length of query: 243
Length of database: 1,051,180,864
Length adjustment: 125
Effective length of query: 118
Effective length of database: 646,610,989
Effective search space: 76300096702
Effective search space used: 76300096702
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 31 (16.5 bits)
|
| PSORT |
|
| VS (DIR, S) |
13 |
| VH (FL, L) |
4 |
| VF (FL, S) |
0 |
| AH (FL, L) |
0 |
| AF (FL, S) |
0 |
| SL (DIR, L) |
0 |
| SS (DIR, S) |
0 |
| SH (FL, L) |
0 |
| SF (FL, S) |
0 |
| CH (FL, L) |
0 |
| CF (FL, S) |
0 |
| FCL (DIR, L) |
0 |
| FC (DIR, S) |
0 |
| FC-IC (SUB) |
0 |