Contig-U14714-1
Contig ID Contig-U14714-1
Contig update 2002.12.18
Contig sequence
>Contig-U14714-1 (Contig-U14714-1Q) /CSM_Contig/Contig-U14714-1Q.Seq.d
AAACTTTTTTTTCATTTAATTTCACTAAATTTACACAATAACTTTATTCT
ATAAATACAAAACTATTTTTTATTGTTTTCTTCTTTTTTTTTTTTATTAT
TATTTTTCAAAAGTTTTTTTTTTTTATACCAATTATACATTTTAATTTAT
TATATTATAAACAAAGTTACCATGACAGAATCAGAAACAACATCAAAAAG
TTAACAAAAGAGTTAAACCAGTACCTAAATCAACTAAAGCAGGTTTGATT
TTCCCAGTTGGTAGAATTCATAGAATGTTAAAGAATAAAGTACCATTAAA
GAGAGTATCAATTCTATCGTCAGTTTATTTAGCAGCAATTTTAGAGTATT
TAGCATCAGAGGTATTAGAATTAACCATCTCACAAGTTTCAATTCAATCT
AAAGAATATCACAATGTAAGAAGAATTTCACCACGTCATTTACTTTTAGC
AATTAAAACTGATGAAGAATTAGATAATTTAATTAGAGTTTCAACAACAA
TTGCTGGTGGTGGTGTCATCCCATACATTCATGAAGTTTTGAAAAAGGTT
GAACAAAAACCAACTCATCCACAACAAAAACAAACAATTAAATCAATTTA
AAAATTATAATAATAATAAAGAATAATTTTTAAAAAAAAAAAAAAAAAAA
AACAAAAAAAAAACAAAAAAAAAAAAAAAGTAAAAAAAGTAAAATTATTT
ATAAAAATAGATTTCAAA

Gap no gap
Contig length 718
Chromosome number (1..6, M) 4
Chromosome length 5430582
Start point 4899131
End point 4898409
Strand (PLUS/MINUS) MINUS
Number of clones 4
Number of EST 5
Link to clone list U14714
List of clone(s)

est1=VSD703F,1,170
est2=SSF313E,44,719
est3=VSD703Z,61,573
est4=SSD131Z,224,654
est5=VHJ628Z,232,549
Translated Amino Acid sequence
nfffi*fh*iytitlfykyktifycfllfffyyyfskvfffytnytf*fiil*tklp*QN
QKQHQKVNKRVKPVPKSTKAGLIFPVGRIHRMLKNKVPLKRVSILSSVYLAAILEYLASE
VLELTISQVSIQSKEYHNVRRISPRHLLLAIKTDEELDNLIRVSTTIAGGGVIPYIHEVL
KKVEQKPTHPQQKQTIKSI*kl****riifkkkkkkkqkknkkkkkvkkvklfikidfk


Translated Amino Acid sequence (All Frames)
Frame A:
klffhlislnlhnnfil*iqnyfllfssffflllffksffflyqlyiliyyiinkvtmte
settsks*qks*tst*in*srfdfpsw*ns*nvke*stikesinsivslfssnfrvfsir
girinhltsfnsi*risqckknfttsftfsn*n**rir*fn*sfnnncwwwchpihs*sf
ekg*tktnssttktnn*inlkiiiiiknnf*kkkkkktkkkqkkkkskkskiiyknrfq


Frame B:
nfffi*fh*iytitlfykyktifycfllfffyyyfskvfffytnytf*fiil*tklp*QN
QKQHQKVNKRVKPVPKSTKAGLIFPVGRIHRMLKNKVPLKRVSILSSVYLAAILEYLASE
VLELTISQVSIQSKEYHNVRRISPRHLLLAIKTDEELDNLIRVSTTIAGGGVIPYIHEVL
KKVEQKPTHPQQKQTIKSI*kl****riifkkkkkkkqkknkkkkkvkkvklfikidfk


Frame C:
tffsfnftkftq*lysintklffivffffffiiifqkffffipiihfnllyykqsyhdri
rnnikkltkelnqylnqlkqv*fsqlvefiec*rikyh*reyqfyrqfi*qqf*si*hqr
y*n*pshkfqfnlknitm*eefhhviyf*qlklmkn*ii*lefqqqllvvvsshtfmkf*
krlnknqlihnknkqlnqfknynnnke*flkkkkkknkkktkkkkk*kk*nyl*k*is


own update 2004. 6.10
Homology vs CSM-cDNA
Query= Contig-U14714-1 (Contig-U14714-1Q)
/CSM_Contig/Contig-U14714-1Q.Seq.d
(718 letters)

Database: CSM
6905 sequences; 5,674,871 total letters


Score E
Sequences producing significant alignments: (bits) Value

Contig-U14714-1 (Contig-U14714-1Q) /CSM_Contig/Conti... 823 0.0
Contig-U06416-1 (Contig-U06416-1Q) /CSM_Contig/Conti... 40 0.003
Contig-U01614-1 (Contig-U01614-1Q) /CSM_Contig/Conti... 38 0.013
Contig-U12715-1 (Contig-U12715-1Q) /CSM_Contig/Conti... 36 0.050
Contig-U06351-1 (Contig-U06351-1Q) /CSM_Contig/Conti... 36 0.050
Contig-U05011-1 (Contig-U05011-1Q) /CSM_Contig/Conti... 36 0.050
Contig-U14871-1 (Contig-U14871-1Q) /CSM_Contig/Conti... 34 0.20
Contig-U12992-1 (Contig-U12992-1Q) /CSM_Contig/Conti... 34 0.20
Contig-U12581-1 (Contig-U12581-1Q) /CSM_Contig/Conti... 34 0.20

>Contig-U14714-1 (Contig-U14714-1Q) /CSM_Contig/Contig-U14714-1Q.Seq.d
Length = 718

Score = 823 bits (415), Expect = 0.0
Identities = 415/415 (100%)
Strand = Plus / Plus


Query: 126 ataccaattatacattttaatttattatattataaacaaagttaccatgacagaatcaga 185
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 126 ataccaattatacattttaatttattatattataaacaaagttaccatgacagaatcaga 185


Query: 186 aacaacatcaaaaagttaacaaaagagttaaaccagtacctaaatcaactaaagcaggtt 245
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 186 aacaacatcaaaaagttaacaaaagagttaaaccagtacctaaatcaactaaagcaggtt 245


Query: 246 tgattttcccagttggtagaattcatagaatgttaaagaataaagtaccattaaagagag 305
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 246 tgattttcccagttggtagaattcatagaatgttaaagaataaagtaccattaaagagag 305


Query: 306 tatcaattctatcgtcagtttatttagcagcaattttagagtatttagcatcagaggtat 365
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 306 tatcaattctatcgtcagtttatttagcagcaattttagagtatttagcatcagaggtat 365


Query: 366 tagaattaaccatctcacaagtttcaattcaatctaaagaatatcacaatgtaagaagaa 425
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 366 tagaattaaccatctcacaagtttcaattcaatctaaagaatatcacaatgtaagaagaa 425


Query: 426 tttcaccacgtcatttacttttagcaattaaaactgatgaagaattagataatttaatta 485
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 426 tttcaccacgtcatttacttttagcaattaaaactgatgaagaattagataatttaatta 485


Query: 486 gagtttcaacaacaattgctggtggtggtgtcatcccatacattcatgaagtttt 540
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 486 gagtttcaacaacaattgctggtggtggtgtcatcccatacattcatgaagtttt 540


Score = 125 bits (63), Expect = 7e-29
Identities = 63/63 (100%)
Strand = Plus / Plus


Query: 13 catttaatttcactaaatttacacaataactttattctataaatacaaaactatttttta 72
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13 catttaatttcactaaatttacacaataactttattctataaatacaaaactatttttta 72


Query: 73 ttg 75
|||
Sbjct: 73 ttg 75


Score = 60.0 bits (30), Expect = 3e-09
Identities = 30/30 (100%)
Strand = Plus / Plus


Query: 689 gtaaaattatttataaaaatagatttcaaa 718
||||||||||||||||||||||||||||||
Sbjct: 689 gtaaaattatttataaaaatagatttcaaa 718


>Contig-U06416-1 (Contig-U06416-1Q) /CSM_Contig/Contig-U06416-1Q.Seq.d
Length = 574

Score = 40.1 bits (20), Expect = 0.003
Identities = 20/20 (100%)
Strand = Plus / Plus


Query: 483 ttagagtttcaacaacaatt 502
||||||||||||||||||||
Sbjct: 348 ttagagtttcaacaacaatt 367


>Contig-U01614-1 (Contig-U01614-1Q) /CSM_Contig/Contig-U01614-1Q.Seq.d
Length = 949

Score = 38.2 bits (19), Expect = 0.013
Identities = 19/19 (100%)
Strand = Plus / Plus


Query: 689 gtaaaattatttataaaaa 707
|||||||||||||||||||
Sbjct: 188 gtaaaattatttataaaaa 206


Database: CSM
Posted date: Jun 9, 2004 7:35 PM
Number of letters in database: 5,674,871
Number of sequences in database: 6905

Lambda K H
1.37 0.711 1.31

Gapped
Lambda K H
1.37 0.711 1.31


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 11,397
Number of Sequences: 6905
Number of extensions: 11397
Number of successful extensions: 1186
Number of sequences better than 10.0: 148
length of query: 718
length of database: 5,674,871
effective HSP length: 16
effective length of query: 702
effective length of database: 5,564,391
effective search space: 3906202482
effective search space used: 3906202482
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 15 (30.2 bits)
dna update 2008.12.29
Homology vs DNA
Query= Contig-U14714-1 (Contig-U14714-1Q) /CSM_Contig/Contig-U14714-1Q.Seq.d
(718 letters)

Database: ddbj_A
92,845,959 sequences; 95,242,211,685 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value N

(AU264429) Dictyostelium discoideum vegetative cDNA clone:VS... 684 0.0 2
(C92611) Dictyostelium discoideum slug cDNA, clone SSF313. 656 0.0 1
(C92133) Dictyostelium discoideum slug cDNA, clone SSD131. 591 e-164 1
(BJ442579) Dictyostelium discoideum cDNA clone:ddv50g08, 3' ... 432 e-144 2
(AU072885) Dictyostelium discoideum slug cDNA, clone SSF313. 161 5e-78 3
(AU264428) Dictyostelium discoideum vegetative cDNA clone:VS... 105 2e-18 1
(BW637982) Dugesia ryukyuensis mRNA, clone: Dr_sW_010_D02, 5... 58 4e-08 2
(BF298113) 060PbD12 Pb cDNA #17, Tommaso Pace, Marta Ponzi, ... 52 2e-06 3
(BF298182) 061PbD05 Pb cDNA #17, Tommaso Pace, Marta Ponzi, ... 52 2e-06 3
(BF298763) 021PbB05 Pb cDNA #20, Charles Yowell and Jane Car... 52 2e-06 3
(BM161402) EST563925 PyBS Plasmodium yoelii yoelii cDNA clon... 50 3e-06 3
(BM170310) EST572833 PyBS Plasmodium yoelii yoelii cDNA clon... 50 3e-06 3
(DC200666) Plasmodium berghei cDNA clone:LV013134, liver sta... 52 3e-06 3
(BM170256) EST572779 PyBS Plasmodium yoelii yoelii cDNA clon... 50 3e-06 3
(BB970610) Plasmodium berghei strain ANKA cDNA clone:OK00025... 52 3e-06 3
(BM166835) EST569358 PyBS Plasmodium yoelii yoelii cDNA clon... 50 3e-06 3
(BB980086) Plasmodium berghei strain ANKA cDNA clone:OK01024... 50 7e-06 3
(AC130630) Rattus norvegicus clone CH230-84K18, WORKING DRAF... 50 7e-06 6
(EL914365) INIT2_72_C03.g2_A006 G5 trophont cDNA (INIT2) Ich... 58 1e-05 2
(EL905230) G5To4_3_D11.g1_A006 G5 tomites: 3 to 8 kb fractio... 58 2e-05 2
(EG965409) AU_Ich_026A_B11 Whole organism normalized cDNA li... 58 2e-05 2
(BF295739) 027PbF11 Pb cDNA #17, Tommaso Pace, Marta Ponzi, ... 46 1e-04 3
(EB690446) NecGex_150A08 Ornamental tobacco (LxS8) Stage 6 F... 48 2e-04 2
(BB981494) Plasmodium berghei strain ANKA cDNA clone:OK01176... 44 3e-04 3
(EC744981) PSE00001401 rw_mgpallid Polysphondylium pallidum ... 40 5e-04 2
(EL914330) INIT2_72_C03.b1_A006 G5 trophont cDNA (INIT2) Ich... 58 5e-04 1
(AL034559) Plasmodium falciparum MAL3P7. 52 7e-04 6
(BI813979) PfESToaa20f04.y1 Plasmodium falciparum 3D7 asexua... 52 0.001 2
(BB974741) Plasmodium berghei strain ANKA cDNA clone:OK00455... 42 0.001 3
(X15548) Tetrahymena thermophilia hv1 gene for histone H2 va... 40 0.002 2
(FF566640) TTBA350TG Tetrahymena thermophila CU428 log phase... 40 0.002 2
(DY678994) TT1AX31TH Tetrahymena thermophila EST library str... 40 0.002 2
(FF566242) TTBA019TG Tetrahymena thermophila CU428 log phase... 40 0.002 2
(FF566583) TTBA305TG Tetrahymena thermophila CU428 log phase... 40 0.002 2
(EL737940) Osmo02075 F. cylindrus osmotic stress library Fra... 40 0.002 3
(CN599260) TTE00007887 Normalized large Tetrahymena thermoph... 40 0.002 2
(DY679591) TTDA084TG Tetrahymena thermophila EST library str... 40 0.002 2
(DY683989) TTEAQ91THB Tetrahymena thermophila EST library, c... 40 0.002 2
(CN599158) TTE00009907 Normalized large Tetrahymena thermoph... 40 0.002 2
(CN599152) TTE00008937 Normalized large Tetrahymena thermoph... 40 0.002 2
(FF566263) TTBA034TG Tetrahymena thermophila CU428 log phase... 40 0.002 2
(CN599104) TTE00008594 Normalized large Tetrahymena thermoph... 40 0.002 2
(CN599030) TTE00007861 Normalized large Tetrahymena thermoph... 40 0.002 2
(CN598987) TTE00010727 Normalized large Tetrahymena thermoph... 40 0.002 2
(CN598943) TTE00008033 Normalized large Tetrahymena thermoph... 40 0.002 2
(CN598852) TTE00012323 Normalized large Tetrahymena thermoph... 40 0.002 2
(CN598849) TTE00006587 Normalized large Tetrahymena thermoph... 40 0.002 2
(CN598838) TTE00008973 Normalized large Tetrahymena thermoph... 40 0.002 2
(CN598819) TTE00006785 Normalized large Tetrahymena thermoph... 40 0.002 2
(CN598814) TTE00010838 Normalized large Tetrahymena thermoph... 40 0.002 2
(CN598807) TTE00008220 Normalized large Tetrahymena thermoph... 40 0.002 2
(CN598727) TTE00006678 Normalized large Tetrahymena thermoph... 40 0.002 2
(CN598514) TTE00006789 Normalized large Tetrahymena thermoph... 40 0.002 2
(CN598448) TTE00007533 Normalized large Tetrahymena thermoph... 40 0.002 2
(CN598442) TTE00008601 Normalized large Tetrahymena thermoph... 40 0.002 2
(BM397091) 5009-0-28-G11.t.2 Chilcoat/Turkewitz cDNA (large ... 40 0.002 2
(CN598422) TTE00010783 Normalized large Tetrahymena thermoph... 40 0.002 2
(CN598421) TTE00009795 Normalized large Tetrahymena thermoph... 40 0.002 2
(CN598412) TTE00008259 Normalized large Tetrahymena thermoph... 40 0.002 2
(CN598392) TTE00015313 Normalized large Tetrahymena thermoph... 40 0.002 2
(CN598385) TTE00013287 Normalized large Tetrahymena thermoph... 40 0.002 2
(CN598342) TTE00006690 Normalized large Tetrahymena thermoph... 40 0.002 2
(CN598313) TTE00010351 Normalized large Tetrahymena thermoph... 40 0.002 2
(CN598151) TTE00010367 Normalized large Tetrahymena thermoph... 40 0.002 2
(CN598108) TTE00010384 Normalized large Tetrahymena thermoph... 40 0.002 2
(CN598053) TTE00010669 Normalized large Tetrahymena thermoph... 40 0.002 2
(CN597973) TTE00009289 Normalized large Tetrahymena thermoph... 40 0.002 2
(CN597799) TTE00010793 Normalized large Tetrahymena thermoph... 40 0.002 2
(CN597482) TTE00010110 Normalized large Tetrahymena thermoph... 40 0.002 2
(CN597437) TTE00007378 Normalized large Tetrahymena thermoph... 40 0.002 2
(CN597405) TTE00007631 Normalized large Tetrahymena thermoph... 40 0.002 2
(CN597334) TTE00011157 Normalized large Tetrahymena thermoph... 40 0.002 2
(CN597324) TTE00007094 Normalized large Tetrahymena thermoph... 40 0.002 2
(CN597322) TTE00006582 Normalized large Tetrahymena thermoph... 40 0.002 2
(CN597004) TTE00012787 Normalized large Tetrahymena thermoph... 40 0.002 2
(CN596756) TTE00014254 Normalized large Tetrahymena thermoph... 40 0.002 2
(CN596467) TTE00007517 Normalized large Tetrahymena thermoph... 40 0.002 2
(CN596219) TTE00014788 Normalized large Tetrahymena thermoph... 40 0.002 2
(CN596134) TTE00011631 Normalized large Tetrahymena thermoph... 40 0.002 2
(CN596061) TTE00007642 Normalized large Tetrahymena thermoph... 40 0.002 2
(CN596027) TTE00006464 Normalized large Tetrahymena thermoph... 40 0.002 2
(DY684336) TTEAU70THB Tetrahymena thermophila EST library, c... 40 0.002 2
(DY679592) TTDA084TGB Tetrahymena thermophila EST library st... 40 0.002 2
(FF566638) TTBA348TG Tetrahymena thermophila CU428 log phase... 40 0.002 2
(CN595878) TTE00009893 Normalized large Tetrahymena thermoph... 40 0.002 2
(CN595858) TTE00009953 Normalized large Tetrahymena thermoph... 40 0.002 2
(FF566494) TTBA231TG Tetrahymena thermophila CU428 log phase... 40 0.002 2
(CN595708) TTE00014931 Normalized large Tetrahymena thermoph... 40 0.002 2
(CN595393) TTE00006167 Normalized large Tetrahymena thermoph... 40 0.002 2
(CN595083) TTE00008550 Normalized large Tetrahymena thermoph... 40 0.002 2
(FF566274) TTBA044TG Tetrahymena thermophila CU428 log phase... 40 0.002 2
(CN594975) TTE00006949 Normalized large Tetrahymena thermoph... 40 0.002 2
(CN594950) TTE00007665 Normalized large Tetrahymena thermoph... 40 0.002 2
(CN594929) TTE00009496 Normalized large Tetrahymena thermoph... 40 0.002 2
(CN594911) TTE00006419 Normalized large Tetrahymena thermoph... 40 0.002 2
(CN594867) TTE00007373 Normalized large Tetrahymena thermoph... 40 0.002 2
(CN594830) TTE00013754 Normalized large Tetrahymena thermoph... 40 0.002 2
(CN594784) TTE00011659 Normalized large Tetrahymena thermoph... 40 0.002 2
(CN594700) TTE00009276 Normalized large Tetrahymena thermoph... 40 0.002 2
(CN594400) TTE00009600 Normalized large Tetrahymena thermoph... 40 0.002 2

>(AU264429) Dictyostelium discoideum vegetative cDNA clone:VSD703,
3' end single read.
Length = 512

Score = 684 bits (345), Expect(2) = 0.0
Identities = 345/345 (100%)
Strand = Plus / Plus


Query: 195 aaaaagttaacaaaagagttaaaccagtacctaaatcaactaaagcaggtttgattttcc 254
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 135 aaaaagttaacaaaagagttaaaccagtacctaaatcaactaaagcaggtttgattttcc 194


Query: 255 cagttggtagaattcatagaatgttaaagaataaagtaccattaaagagagtatcaattc 314
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 195 cagttggtagaattcatagaatgttaaagaataaagtaccattaaagagagtatcaattc 254


Query: 315 tatcgtcagtttatttagcagcaattttagagtatttagcatcagaggtattagaattaa 374
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 255 tatcgtcagtttatttagcagcaattttagagtatttagcatcagaggtattagaattaa 314


Query: 375 ccatctcacaagtttcaattcaatctaaagaatatcacaatgtaagaagaatttcaccac 434
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 315 ccatctcacaagtttcaattcaatctaaagaatatcacaatgtaagaagaatttcaccac 374


Query: 435 gtcatttacttttagcaattaaaactgatgaagaattagataatttaattagagtttcaa 494
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 375 gtcatttacttttagcaattaaaactgatgaagaattagataatttaattagagtttcaa 434


Query: 495 caacaattgctggtggtggtgtcatcccatacattcatgaagttt 539
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 435 caacaattgctggtggtggtgtcatcccatacattcatgaagttt 479

Score = 147 bits (74), Expect(2) = 0.0
Identities = 74/74 (100%)
Strand = Plus / Plus


Query: 126 ataccaattatacattttaatttattatattataaacaaagttaccatgacagaatcaga 185
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 64 ataccaattatacattttaatttattatattataaacaaagttaccatgacagaatcaga 123


Query: 186 aacaacatcaaaaa 199
||||||||||||||
Sbjct: 124 aacaacatcaaaaa 137

Lambda K H
1.37 0.711 1.31

Matrix: blastn matrix:1 -3
Number of Sequences: 92845959
Number of Hits to DB: 619,892,572
Number of extensions: 40634243
Number of successful extensions: 3377042
Number of sequences better than 10.0: 3760
Length of query: 718
Length of database: 95,242,211,685
Length adjustment: 24
Effective length of query: 694
Effective length of database: 97,308,875,965
Effective search space: 67532359919710
Effective search space used: 67532359919710
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)

protein update 2009. 7.12
Homology vs Protein
Query= Contig-U14714-1 (Contig-U14714-1Q) /CSM_Contig/Contig-U14714-1Q.Seq.d
(718 letters)

Database: nrp_B
3,236,559 sequences; 1,051,180,864 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value

X06725_1(X06725|pid:none) Tetrahymena macronucleus mRNA for hist... 110 3e-23
FB854219_1(FB854219|pid:none) Sequence 73492 from Patent WO20080... 108 2e-22
AK340227_1(AK340227|pid:none) Acyrthosiphon pisum ACYPI005340 mR... 107 3e-22
CR954202_17(CR954202|pid:none) Ostreococcus tauri strain OTTH059... 105 1e-21
(P70094) RecName: Full=Histone H2A.Z-like; Short=H2A.Zl... 105 1e-21
(P08991) RecName: Full=Histone H2A.V; AltName: Full=H2A.F/Z; Fla... 105 1e-21
FB854185_1(FB854185|pid:none) Sequence 73458 from Patent WO20080... 105 1e-21
FB854195_1(FB854195|pid:none) Sequence 73468 from Patent WO20080... 105 1e-21
BT081892_1(BT081892|pid:none) Rana catesbeiana clone rcat-evr-53... 105 2e-21
(P08985) RecName: Full=Histone H2A.v; AltName: Full=H2A.F/Z; ... 105 2e-21
(Q8S857) RecName: Full=Probable histone H2A variant 2; &AC01678... 105 2e-21
CR940348_344(CR940348|pid:none) Theileria annulata strain Ankara... 105 2e-21
FB854207_1(FB854207|pid:none) Sequence 73480 from Patent WO20080... 104 2e-21
AF502246_1(AF502246|pid:none) Toxoplasma gondii histone H2AZ mRN... 104 2e-21
FB854223_1(FB854223|pid:none) Sequence 73496 from Patent WO20080... 104 2e-21
(Q9C944) RecName: Full=Probable histone H2A variant 3; AltName: ... 104 3e-21
EF144724_1(EF144724|pid:none) Populus trichocarpa clone WS01117_... 104 3e-21
BT041750_1(BT041750|pid:none) Zea mays full-length cDNA clone ZM... 103 4e-21
(Q84MP7) RecName: Full=Probable histone H2A variant 3; &AC09255... 103 4e-21
AM294366_1(AM294366|pid:none) Drosophila melanogaster CG5499 gen... 103 5e-21
AM294368_1(AM294368|pid:none) Drosophila melanogaster CG5499 gen... 103 5e-21
EU551646_1(EU551646|pid:none) Dermacentor variabilis isolate DvM... 103 7e-21
AK151509_1(AK151509|pid:none) Mus musculus bone marrow macrophag... 102 9e-21
(P0C0S4) RecName: Full=Histone H2A.Z; Short=H2A/z; &(P... 102 9e-21
FB854173_1(FB854173|pid:none) Sequence 73446 from Patent WO20080... 102 9e-21
AB273625_1(AB273625|pid:none) Bombyx mori h2a.z mRNA for histone... 102 9e-21
BT049809_1(BT049809|pid:none) Salmo salar clone ssal-eve-569-315... 102 9e-21
BT046336_1(BT046336|pid:none) Salmo salar clone ssal-eve-528-367... 102 1e-20
BT079136_1(BT079136|pid:none) Esox lucius clone eluc-evq-516-128... 102 1e-20
AM294371_1(AM294371|pid:none) Drosophila melanogaster CG5499 gen... 102 1e-20
BC049523_1(BC049523|pid:none) Danio rerio H2A histone family, me... 102 1e-20
AB209001_1(AB209001|pid:none) Homo sapiens mRNA for H2A histone ... 102 1e-20
AK168110_1(AK168110|pid:none) Mus musculus CRL-1722 L5178Y-R cDN... 102 1e-20
(P02272) RecName: Full=Histone H2A.V; AltName: Full=H2A.F/Z; &(... 102 1e-20
AF483074_1(AF483074|pid:none) Boltenia villosa histone 2A Z vari... 102 2e-20
(Q27511) RecName: Full=Histone H2A.V; AltName: Full=H2A.F/Z; &T... 101 2e-20
EU953384_1(EU953384|pid:none) Zea mays clone 1405202 histone H2A... 101 2e-20
(O62695) RecName: Full=Histone H2A.V; AltName: Full=H2A.F/Z; 100 3e-20
BT076176_1(BT076176|pid:none) Caligus rogercresseyi clone crog-e... 100 4e-20
(Q9SII0) RecName: Full=Probable histone H2A variant 2; AltName: ... 100 4e-20
EF087885_1(EF087885|pid:none) Picea sitchensis clone WS02915_O17... 100 8e-20
AF193345_1(AF193345|pid:none) Oryza sativa H2A protein mRNA, com... 100 8e-20
EF086143_1(EF086143|pid:none) Picea sitchensis clone WS0291_L11 ... 99 1e-19
FN357371_10(FN357371|pid:none) Schistosoma mansoni genome sequen... 99 1e-19
EU934376_1(EU934376|pid:none) TSA: Anopheles darlingi AD-280 H2A... 99 1e-19
(Q5K8Y2) RecName: Full=Histone H2A.Z; &AE017352_43(AE017352|pid... 99 1e-19
AY814205_1(AY814205|pid:none) Schistosoma japonicum SJCHGC05820 ... 99 1e-19
(Q1E5N1) RecName: Full=Histone H2A; 99 2e-19
AF030235_1(AF030235|pid:none) Oryctolagus cuniculus histone H2A.... 99 2e-19
AM450609_1(AM450609|pid:none) Vitis vinifera contig VV78X048548.... 99 2e-19
BT057209_1(BT057209|pid:none) Salmo salar clone ssal-sjb-011-283... 98 3e-19
AX969707_1(AX969707|pid:none) Sequence 510 from Patent EP1104808. 97 5e-19
(A2XZN0) RecName: Full=Probable histone H2A.6; &(Q75L11) RecNam... 96 8e-19
(A5DXC6) RecName: Full=Histone H2A.Z; 96 8e-19
FB854205_1(FB854205|pid:none) Sequence 73478 from Patent WO20080... 96 1e-18
AB195235_1(AB195235|pid:none) Paramecium caudatum macronuclear H... 96 1e-18
FB854189_1(FB854189|pid:none) Sequence 73462 from Patent WO20080... 96 1e-18
(A5DXS8) RecName: Full=Histone H2A.2; 96 1e-18
(P02274) RecName: Full=Histone H2A.2; 96 1e-18
FN392322_150(FN392322|pid:none) Pichia pastoris GS115 chromosome... 95 2e-18
EF083708_1(EF083708|pid:none) Picea sitchensis clone WS0297_G17 ... 95 2e-18
EF087613_1(EF087613|pid:none) Picea sitchensis clone WS02730_I03... 95 2e-18
AB480880_1(AB480880|pid:none) Bombyx mori H2A-L2 mRNA for histon... 95 2e-18
(Q875B8) RecName: Full=Histone H2A; &BX088700_6(BX088700|pid:no... 95 2e-18
(A1CJ10) RecName: Full=Histone H2A; &(A1D8G8) RecName: Fu &(Q2U... 95 2e-18
(Q0U1A1) RecName: Full=Histone H2A; 94 3e-18
(A5DQL2) RecName: Full=Histone H2A.Z; 94 3e-18
AM425594_1(AM425594|pid:none) Vitis vinifera contig VV78X168773.... 94 4e-18
HSTE91(A02600)histone H2A.1 - Tetrahymena pyriformis 94 4e-18
(A3GHC1) RecName: Full=Histone H2A.Z; 94 4e-18
(P02275) RecName: Full=Histone H2A.1; AltName: Full=wcH2A-9; &D... 94 4e-18
FB854237_1(FB854237|pid:none) Sequence 73510 from Patent WO20080... 94 4e-18
HSWT91(A02602)histone H2A.1 - wheat 94 4e-18
(Q9M531) RecName: Full=Histone H2A; &AF242311_1(AF242311|pid:no... 94 4e-18
(Q6FM31) RecName: Full=Histone H2A.2; &CR380957_486(CR380957|pi... 94 4e-18
(Q6BQE9) RecName: Full=Histone H2A.Z; &CR382137_242(CR382137|pi... 94 4e-18
AB001052_1(AB001052|pid:none) Bombyx mori mRNA for histone H2A-l... 94 5e-18
BC115314_1(BC115314|pid:none) Danio rerio zgc:136891, mRNA (cDNA... 94 5e-18
(Q9LZ46) RecName: Full=Probable histone H2A.4; AltName: Full=HTA... 94 5e-18
CU928167_444(CU928167|pid:none) Kluyveromyces thermotolerans str... 94 5e-18
FB854135_1(FB854135|pid:none) Sequence 73408 from Patent WO20080... 94 5e-18
(Q75CC6) RecName: Full=Histone H2A.Z; &AE016816_189(AE016816|pi... 94 5e-18
BT049204_1(BT049204|pid:none) Salmo salar clone ssal-evd-521-072... 93 7e-18
FM992690_308(FM992690|pid:none) Candida dubliniensis CD36 chromo... 93 7e-18
CU928171_698(CU928171|pid:none) Kluyveromyces thermotolerans str... 93 7e-18
(Q1DTG2) RecName: Full=Histone H2A.Z; 93 7e-18
AJ238321_2(AJ238321|pid:none) Asellus aquaticus 5S rRNA gene, hi... 93 7e-18
(Q6PV61) RecName: Full=Histone H2A; 93 7e-18
EF086604_1(EF086604|pid:none) Picea sitchensis clone WS02748_K18... 93 7e-18
AK017022_1(AK017022|pid:none) Mus musculus adult male testis cDN... 93 7e-18
DQ418455_3(DQ418455|pid:none) Chlamys farreri core histone gene ... 93 7e-18
(P02276) RecName: Full=Histone H2A.2.1; &HSWT2A(S00623;A02603) 93 7e-18
(Q4HTT1) RecName: Full=Histone H2A; 93 9e-18
EU952344_1(EU952344|pid:none) Zea mays clone 1278117 histone H2A... 93 9e-18
(P08844) RecName: Full=Histone H2A; &A27332(A27332) &AM920435_8... 93 9e-18
BT071574_1(BT071574|pid:none) Picea sitchensis clone WS02925_A17... 93 9e-18
AB249650_2(AB249650|pid:none) Drosophila takahashii H4, H2A, H2B... 93 9e-18
(Q5AUJ1) RecName: Full=Histone H2A.Z; 93 9e-18
DQ370422_1(DQ370422|pid:none) Gateway adapted binary vector pCGT... 93 9e-18
(A1C5F1) RecName: Full=Histone H2A.Z; 93 9e-18
(Q5AEE1) RecName: Full=Histone H2A.Z; 93 9e-18
AC144617_1(AC144617|pid:none) Medicago truncatula clone mth2-7m9... 93 9e-18
(Q2UJ80) RecName: Full=Histone H2A.Z; &AP007155_1145(AP007155|p... 93 9e-18
(A1D0C1) RecName: Full=Histone H2A.Z; &(Q4WE68) RecName: Fu 93 9e-18
(A2R702) RecName: Full=Histone H2A.Z; &AM270359_2(AM270359|pid:... 93 9e-18
(P84051) RecName: Full=Histone H2A; &(P84052) RecName: Fu &(P84... 93 9e-18
DQ370421_2(DQ370421|pid:none) Gateway adapted binary vector pFYT... 93 9e-18
FB854259_1(FB854259|pid:none) Sequence 73532 from Patent WO20080... 93 9e-18
(P0C952) RecName: Full=Histone H2A; &(P0C953) RecName: Fu &AM27... 93 9e-18
AM920436_1454(AM920436|pid:none) Penicillium chrysogenum Wiscons... 93 9e-18
(O74268) RecName: Full=Histone H2A; 93 9e-18
(Q09FM9) RecName: Full=Histone H2A.Z; &DQ923591_1(DQ923591|pid:... 93 9e-18
BT040640_1(BT040640|pid:none) Zea mays full-length cDNA clone ZM... 93 9e-18
(Q8X132) RecName: Full=Histone H2A; &AY062171_1(AY062171|pid:no... 93 9e-18
(O04848) RecName: Full=Probable histone H2AXa; AltName: Full=HTA... 92 1e-17
EU959558_1(EU959558|pid:none) Zea mays clone 218580 histone H2A ... 92 1e-17
EF677589_1(EF677589|pid:none) Picea sitchensis clone WS02771_F05... 92 1e-17
BC129542_1(BC129542|pid:none) Xenopus laevis hypothetical protei... 92 1e-17
AB032543_1(AB032543|pid:none) Nicotiana tabacum A34 mRNA for H2A... 92 1e-17
AE014134_3599(AE014134|pid:none) Drosophila melanogaster chromos... 92 1e-17
(A2Y5G8) RecName: Full=Probable histone H2A.4; &(Q6L500) RecNam... 92 1e-17
(P35063) RecName: Full=Histone H2AX; &AJ306722_1(AJ306722|pid:n... 92 1e-17
(P40281) RecName: Full=Histone H2A.2; &FB854149_1(FB854149|pid:... 92 2e-17
AK078464_1(AK078464|pid:none) Mus musculus 12 days embryo male w... 92 2e-17
CU928175_295(CU928175|pid:none) Zygosaccharomyces rouxii strain ... 92 2e-17
EU853699_1(EU853699|pid:none) Philodina roseola histone H2A vari... 92 2e-17
M18455_1(M18455|pid:none) Saccharomyces cerevisiae adenylate kin... 92 2e-17
FB854253_1(FB854253|pid:none) Sequence 73526 from Patent WO20080... 92 2e-17
EU142255_1(EU142255|pid:none) Artemia franciscana histone H2A mR... 92 2e-17
FB854165_1(FB854165|pid:none) Sequence 73438 from Patent WO20080... 92 2e-17
BC089240_1(BC089240|pid:none) Xenopus tropicalis H2A histone fam... 92 2e-17
FN315474_1(FN315474|pid:none) Schistosoma japonicum isolate Anhu... 92 2e-17
EU957929_1(EU957929|pid:none) Zea mays clone 1633885 histone H2A... 92 2e-17
CU928173_408(CU928173|pid:none) Zygosaccharomyces rouxii strain ... 92 2e-17
BT037288_1(BT037288|pid:none) Zea mays full-length cDNA clone ZM... 92 2e-17
BT078019_1(BT078019|pid:none) Lepeophtheirus salmonis Pacific fo... 92 2e-17
BT077570_1(BT077570|pid:none) Lepeophtheirus salmonis Pacific fo... 92 2e-17
(A5DWF1) RecName: Full=Histone H2A.1; 92 2e-17
AM774338_2(AM774338|pid:none) Reporter vector pYH2A. 92 2e-17
(Q6C341) RecName: Full=Histone H2A.Z; &CR382132_118(CR382132|pi... 92 2e-17
AF058444_1(AF058444|pid:none) Gallus gallus truncated histone ma... 92 2e-17
(Q9P0M6) RecName: Full=Core histone macro-H2A.2; Short=... 92 2e-17
EU966276_1(EU966276|pid:none) Zea mays clone 293053 histone H2A ... 92 2e-17
(Q6CUC8) RecName: Full=Histone H2A.Z; &CR382123_252(CR382123|pi... 92 2e-17
FB854249_1(FB854249|pid:none) Sequence 73522 from Patent WO20080... 92 2e-17
AK020744_1(AK020744|pid:none) Mus musculus adult male spinal cor... 92 2e-17
(P02277) RecName: Full=Histone H2A.2.2; 92 2e-17
BC116136_1(BC116136|pid:none) Bos taurus H2A histone family, mem... 92 2e-17
EF087791_1(EF087791|pid:none) Picea sitchensis clone WS02750_P03... 92 2e-17
EU215423_1(EU215423|pid:none) Anthonomus grandis histone H2A, hi... 92 2e-17
BT085490_1(BT085490|pid:none) Zea mays full-length cDNA clone ZM... 92 2e-17
FB854235_1(FB854235|pid:none) Sequence 73508 from Patent WO20080... 92 2e-17
(Q2HU68) RecName: Full=Probable histone H2A.1; &AC149210_3(AC14... 92 2e-17
BT038313_1(BT038313|pid:none) Zea mays full-length cDNA clone ZM... 91 3e-17
(Q9LHQ5) RecName: Full=Probable histone H2A.2; AltName: Full=HTA... 91 3e-17
(Q757L4) RecName: Full=Histone H2A.2; &AE016818_344(AE016818|pi... 91 3e-17
EF677259_1(EF677259|pid:none) Picea sitchensis clone WS02764_F11... 91 3e-17
I80811(I80811)histone H2A.1 - rat 91 3e-17
BC006955_1(BC006955|pid:none) Mus musculus H2A histone family, m... 91 3e-17
BT002503_1(BT002503|pid:none) Arabidopsis thaliana Unknown prote... 91 3e-17
(A2WQG7) RecName: Full=Probable histone H2A.5; &(Q94E96) RecNam... 91 3e-17
AF054174_1(AF054174|pid:none) Homo sapiens histone macroH2A1.2 m... 91 3e-17
EU952971_1(EU952971|pid:none) Zea mays clone 1372232 histone H2A... 91 3e-17
AF044286_1(AF044286|pid:none) Homo sapiens histone macroH2A1.1 m... 91 3e-17
AF041483_1(AF041483|pid:none) Homo sapiens histone macroH2A1.2 m... 91 3e-17
(Q4IMD1) RecName: Full=Histone H2A.Z; 91 3e-17
U84114_1(U84114|pid:none) Psammechinus miliaris cleavage stage h... 91 3e-17
AK023409_1(AK023409|pid:none) Homo sapiens cDNA FLJ13347 fis, cl... 91 3e-17
AK039274_1(AK039274|pid:none) Mus musculus adult male spinal cor... 91 3e-17
EF147777_1(EF147777|pid:none) Populus trichocarpa clone WS0124_P... 91 3e-17
(Q02874) RecName: Full=Core histone macro-H2A.1; Short=... 91 3e-17
M99065_1(M99065|pid:none) Rattus norvegicus histone H2A.1 mRNA, ... 91 3e-17
AC155882_23(AC155882|pid:none) Medicago truncatula chromosome 7 ... 91 4e-17
(Q43214) RecName: Full=Protein H2A.6; AltName: Full=wcH2A-3; &D... 91 4e-17
T20119(T20119) hypothetical protein C50F4.13 - Caenorhabditis el... 91 4e-17
(Q873G4) RecName: Full=Histone H2A.Z; &BX284748_11(BX284748|pid... 91 4e-17
BC150451_1(BC150451|pid:none) Danio rerio guanine nucleotide bin... 91 4e-17
AM454914_5(AM454914|pid:none) Vitis vinifera contig VV78X268030.... 91 4e-17
(Q3ZBX9) RecName: Full=Histone H2A.J; Short=H2a/j; &(Q... 91 4e-17
BC076893_1(BC076893|pid:none) Xenopus tropicalis H2A histone, mR... 91 4e-17
(Q0UG93) RecName: Full=Histone H2A.Z; 91 4e-17
(P25469) RecName: Full=Histone H2A.1; AltName: Full=LeH2A-1; &J... 91 4e-17
FB854169_1(FB854169|pid:none) Sequence 73442 from Patent WO20080... 91 4e-17
BT077498_1(BT077498|pid:none) Lepeophtheirus salmonis Pacific fo... 91 4e-17
(P09588) RecName: Full=Histone H2A; &AC024696_5(AC024696|pid:no... 91 4e-17
AJ270227_1(AJ270227|pid:none) Entodinium caudatum partial mRNA f... 91 4e-17
CP001328_413(CP001328|pid:none) Micromonas sp. RCC299 chromosome... 91 4e-17
AJ006959_1(AJ006959|pid:none) Botrytis fuckeliana H2A.1 gene. 91 5e-17
(A3LXE7) RecName: Full=Histone H2A.2; &CP000500_276(CP000500|pi... 91 5e-17
(Q12692) RecName: Full=Histone H2A.Z; &AY558000_1(AY558000|pid:... 91 5e-17
AY631392_1(AY631392|pid:none) Toxoplasma gondii histone H2AX gen... 91 5e-17
EU977115_1(EU977115|pid:none) Zea mays clone 999273 histone H2A ... 91 5e-17
CR848416_1(CR848416|pid:none) Xenopus tropicalis finished cDNA, ... 91 5e-17
(P16866) RecName: Full=Histone H2A-IV; &JQ0796(JQ0796) &M31922_... 91 5e-17
(Q07135) RecName: Full=Histone H2A, orphon; &S40435(S40435;S326... 91 5e-17
HSOO2(A02595)histone H2A - common cuttlefish 91 5e-17
CU633898_55(CU633898|pid:none) Podospora anserina genomic DNA ch... 91 5e-17
FB854217_1(FB854217|pid:none) Sequence 73490 from Patent WO20080... 91 5e-17
BT049993_1(BT049993|pid:none) Salmo salar clone ssal-tc-017-027 ... 91 5e-17
(O81826) RecName: Full=Probable histone H2A.3; AltName: Full=HTA... 91 5e-17
CR954208_187(CR954208|pid:none) Ostreococcus tauri strain OTTH05... 91 5e-17
(Q96QV6) RecName: Full=Histone H2A type 1-A; AltName: Full=H2A/r... 90 6e-17
(P04912) RecName: Full=Histone H2A.2; &AY693115_1(AY693115|pid:... 90 6e-17
(P16865) RecName: Full=Histone H2A-III; &JQ0794(JQ0794) &M31921... 90 6e-17
(Q59VP2) RecName: Full=Histone H2A.2; &FM992688_388(FM992688|pi... 90 6e-17
EF081579_1(EF081579|pid:none) Picea sitchensis clone WS02716_G21... 90 6e-17
(Q6WV67) RecName: Full=Histone H2A; &AY267758_1(AY267758|pid:no... 90 6e-17
FB854177_1(FB854177|pid:none) Sequence 73450 from Patent WO20080... 90 6e-17
AY389592_1(AY389592|pid:none) Hyacinthus orientalis histone H2A ... 90 6e-17
(Q6BRG3) RecName: Full=Histone H2A.2; &CR382136_721(CR382136|pi... 90 6e-17
EF084773_1(EF084773|pid:none) Picea sitchensis clone WS02812_A17... 90 6e-17
HSSF2(A02596)histone H2A - starfish (Asterias rubens) 90 8e-17
(A3LZZ0) RecName: Full=Histone H2A.1; &CP000502_101(CP000502|pi... 90 8e-17
FN317391_1(FN317391|pid:none) Schistosoma japonicum isolate Anhu... 90 8e-17
BC073272_1(BC073272|pid:none) Xenopus laevis MGC80637 protein, m... 90 8e-17
FN357712_11(FN357712|pid:none) Schistosoma mansoni genome sequen... 90 8e-17
AL606464_5(AL606464|pid:none) Mouse DNA sequence from clone RP23... 90 8e-17
S59590(S59590) histone H2A (clone CH-IV) - Chlamydomonas reinhar... 90 8e-17
(P50567) RecName: Full=Histone H2A; &L41841_4(L41841|pid:none) ... 90 8e-17
FM992690_368(FM992690|pid:none) Candida dubliniensis CD36 chromo... 90 8e-17
FN357295_62(FN357295|pid:none) Schistosoma mansoni genome sequen... 90 8e-17
(Q9C681) RecName: Full=Probable histone H2A.1; AltName: Full=HTA... 90 8e-17
(Q59SU5) RecName: Full=Histone H2A.1; 90 8e-17
FB854171_1(FB854171|pid:none) Sequence 73444 from Patent WO20080... 90 8e-17
CR380951_92(CR380951|pid:none) Candida glabrata strain CBS138 ch... 90 8e-17
AC154391_20(AC154391|pid:none) Medicago truncatula chromosome 7 ... 90 8e-17
(Q6BKW8) RecName: Full=Histone H2A.1; &CR382138_802(CR382138|pi... 90 8e-17
FB854183_1(FB854183|pid:none) Sequence 73456 from Patent WO20080... 89 1e-16
HSHUA5(B26318)histone H2A.5 - human 89 1e-16
BT039245_1(BT039245|pid:none) Zea mays full-length cDNA clone ZM... 89 1e-16
AF007904_2(AF007904|pid:none) Chaetopterus variopedatus histone ... 89 1e-16
AJ494854_1(AJ494854|pid:none) Oikopleura dioica partial mRNA for... 89 1e-16
(A2YVE5) RecName: Full=Probable histone H2A.3; &(Q84NJ4) RecNam... 89 1e-16
BT036844_1(BT036844|pid:none) Zea mays full-length cDNA clone ZM... 89 1e-16
EU959150_1(EU959150|pid:none) Zea mays clone 210993 histone H2A ... 89 1e-16
EU957905_1(EU957905|pid:none) Zea mays clone 1632076 histone H2A... 89 1e-16
(Q64598) RecName: Full=Histone H2A type 1-F; &HSRT2A(S26186;A02... 89 1e-16
BC077427_1(BC077427|pid:none) Xenopus laevis MGC82198 protein, m... 89 1e-16
(Q4R3X5) RecName: Full=Histone H2A.J; Short=H2a/j; &AB... 89 1e-16
(A5DBG4) RecName: Full=Histone H2A.1; 89 1e-16
EU853691_1(EU853691|pid:none) Adineta vaga histone H2A variant H... 89 1e-16
(P40280) RecName: Full=Histone H2A; &FB854159_1(FB854159|pid:no... 89 1e-16
BC098891_1(BC098891|pid:none) Danio rerio zgc:114037, mRNA (cDNA... 89 1e-16
AM478606_2(AM478606|pid:none) Vitis vinifera contig VV78X018792.... 89 1e-16
AF013803_1(AF013803|pid:none) Pinus taeda H2A homolog (lp15) gen... 89 1e-16
BC169194_1(BC169194|pid:none) Danio rerio cDNA clone MGC:195633 ... 89 1e-16
HSTR21(A92959;A92139;A92107;A02592;A23220)histone H2A, gonadal -... 89 1e-16
CR762147_1(CR762147|pid:none) Xenopus tropicalis finished cDNA, ... 89 1e-16
BC134206_1(BC134206|pid:none) Danio rerio zgc:163047, mRNA (cDNA... 89 1e-16
(P06897) RecName: Full=Histone H2A type 1; &BC106331_1(BC106331... 89 1e-16
FN392320_452(FN392320|pid:none) Pichia pastoris GS115 chromosome... 89 1e-16
FB854163_1(FB854163|pid:none) Sequence 73436 from Patent WO20080... 89 1e-16
AM480050_2(AM480050|pid:none) Vitis vinifera contig VV78X068988.... 89 1e-16
(P40282) RecName: Full=Histone H2A; &A45564(A45564) &AL844505_1... 89 1e-16
(A9UMV8) RecName: Full=Histone H2A.J; Short=H2a/j; &(Q... 89 1e-16
FB854193_1(FB854193|pid:none) Sequence 73466 from Patent WO20080... 89 1e-16
AF255740_2(AF255740|pid:none) Bufo bufo gagarizans histone H1 (H... 89 1e-16
(P02264) RecName: Full=Histone H2A; &X01064_1(X01064|pid:none) 89 1e-16
BC158988_1(BC158988|pid:none) Xenopus tropicalis hypothetical pr... 89 1e-16
BC074601_1(BC074601|pid:none) Xenopus tropicalis MGC69325 protei... 89 1e-16
AM910993_316(AM910993|pid:none) Plasmodium knowlesi strain H chr... 89 1e-16
(P0C170) RecName: Full=Histone H2A type 1-E; 89 2e-16
X00089_1(X00089|pid:none) Human histone H2a gene. 89 2e-16
AY389710_1(AY389710|pid:none) Hyacinthus orientalis histone H2A ... 89 2e-16
BT045470_1(BT045470|pid:none) Salmo salar clone ssal-rgf-522-151... 89 2e-16
AY849374_1(AY849374|pid:none) Emiliania huxleyi histone H2A mRNA... 89 2e-16
AY894000_1(AY894000|pid:none) Synthetic construct Homo sapiens c... 89 2e-16
CQ868376_1(CQ868376|pid:none) Sequence 1 from Patent WO2004074466. 89 2e-16
AM494966_181(AM494966|pid:none) Leishmania braziliensis chromoso... 89 2e-16
HSUR9P(A37574;A02593)histone H2A, gonadal - sea urchin (Parechin... 89 2e-16
BT057050_1(BT057050|pid:none) Salmo salar clone ssal-eve-541-247... 89 2e-16
(P0C169) RecName: Full=Histone H2A type 1-C; &(Q93077) RecName:... 89 2e-16
BC072354_1(BC072354|pid:none) Xenopus laevis hypothetical protei... 89 2e-16
AK001765_1(AK001765|pid:none) Homo sapiens cDNA FLJ10903 fis, cl... 89 2e-16
(Q8IUE6) RecName: Full=Histone H2A type 2-B; &AL591493_16(AL591... 89 2e-16
(Q00728) RecName: Full=Histone H2A type 4; AltName: Full=Histone... 88 2e-16
S45110(S45110) histone H2A - mouse &Z30940_1(Z30940|pid:none) 88 2e-16
AJ494852_1(AJ494852|pid:none) Oikopleura dioica partial H2A.4 ge... 88 2e-16
(P13912) RecName: Full=Histone H2A; &I50457(I50457) &X14730_1(X... 88 2e-16
(A1A4R1) RecName: Full=Histone H2A type 2-C; &(Q16777) RecName:... 88 2e-16
BC125248_1(BC125248|pid:none) Mus musculus histone cluster 1, H2... 88 2e-16
JH0303(JH0303) histone H2A.1 - mouse &M33988_1(M33988|pid:none) 88 2e-16
(Q9HGX4) RecName: Full=Histone H2A; &AJ293758_1(AJ293758|pid:no... 88 2e-16
(P35062) RecName: Full=Histone H2A-III; &D11054_1(D11054|pid:no... 88 2e-16
EU969849_1(EU969849|pid:none) Zea mays clone 336477 unknown mRNA. 88 2e-16
CP000592_101(CP000592|pid:none) Ostreococcus lucimarinus CCE9901... 88 2e-16
(Q8CGP5) RecName: Full=Histone H2A type 1-F; &AY158916_1(AY1589... 88 2e-16
(P02263) RecName: Full=Histone H2A-IV; &D11055_1(D11055|pid:non... 88 2e-16
(P16104) RecName: Full=Histone H2A.x; Short=H2a/x; &AB... 88 2e-16
EU999570_1(EU999570|pid:none) Pinus sylvestris isolate Spain_26 ... 88 2e-16
FN357686_6(FN357686|pid:none) Schistosoma mansoni genome sequenc... 88 3e-16
AC159408_33(AC159408|pid:none) Trypanosoma brucei chromosome 7 c... 88 3e-16
(A2YMC5) RecName: Full=Probable histone H2A.1; &(Q6ZL43) RecNam... 88 3e-16
BT042424_1(BT042424|pid:none) Zea mays full-length cDNA clone ZM... 88 3e-16
AY087924_1(AY087924|pid:none) Arabidopsis thaliana clone 39667 m... 88 3e-16
(Q64522) RecName: Full=Histone H2A type 2-B; AltName: Full=H2a-6... 88 3e-16
(P09589) RecName: Full=Histone H2A, sperm; Flags: Fragment; &HS... 87 4e-16
EU853690_1(EU853690|pid:none) Adineta vaga histone H2A variant H... 87 4e-16
EU853696_1(EU853696|pid:none) Philodina roseola histone H2A vari... 87 4e-16
EU853695_1(EU853695|pid:none) Philodina roseola histone H2A vari... 87 4e-16
EU853698_1(EU853698|pid:none) Philodina roseola histone H2A vari... 87 4e-16
(Q6GM86) RecName: Full=Histone H2A.x; Short=H2a/x; &BC... 87 4e-16
CP000595_84(CP000595|pid:none) Ostreococcus lucimarinus CCE9901 ... 87 4e-16
AL954191_2(AL954191|pid:none) Zebrafish DNA sequence from clone ... 87 5e-16
AM494969_126(AM494969|pid:none) Leishmania braziliensis chromoso... 87 5e-16
(P07793) RecName: Full=Late histone H2A.2.2; &M14141_1(M14141|p... 87 5e-16
(P69141) RecName: Full=Histone H2A, embryonic; &(P69142) RecNam... 87 5e-16
M11085_1(M11085|pid:none) Sea urchin (P.miliaris) late histone H... 87 5e-16
AK312127_1(AK312127|pid:none) Homo sapiens cDNA, FLJ92409, highl... 87 5e-16
(P13630) RecName: Full=Histone H2A; &HSURH2(A90776;A02598) &J01... 87 5e-16
(P04736) RecName: Full=Late histone H2A.2.1; &A25077(A25077) &M... 87 5e-16
EU958801_1(EU958801|pid:none) Zea mays clone 207926 histone H2A ... 87 5e-16
(P04735) RecName: Full=Late histone H2A.1; &M11084_1(M11084|pid... 87 5e-16
CP001160_318(CP001160|pid:none) Thalassiosira pseudonana CCMP133... 87 7e-16
BC155015_1(BC155015|pid:none) Xenopus tropicalis hypothetical pr... 86 9e-16
CU651580_3(CU651580|pid:none) Zebrafish DNA sequence from clone ... 86 9e-16
BT038738_1(BT038738|pid:none) Zea mays full-length cDNA clone ZM... 86 9e-16
(A2ZK26) RecName: Full=Probable histone H2A.8; 86 9e-16
AK312124_1(AK312124|pid:none) Homo sapiens cDNA, FLJ92406, highl... 86 1e-15
CR457079_1(CR457079|pid:none) Homo sapiens full open reading fra... 86 1e-15
Y09951_1(Y09951|pid:none) A.gambiae H2A gene, partial. 86 1e-15
AC093921_10(AC093921|pid:none) Oryza sativa (japonica cultivar-g... 86 1e-15
EU652315_9(EU652315|pid:none) Adineta vaga speckle-type POZ prot... 86 1e-15
BC074176_1(BC074176|pid:none) Xenopus laevis MGC81997 protein, m... 86 1e-15
AK023973_1(AK023973|pid:none) Homo sapiens cDNA FLJ13911 fis, cl... 86 1e-15
AJ494849_1(AJ494849|pid:none) Oikopleura dioica H2A.3 gene for h... 86 1e-15
AY760064_1(AY760064|pid:none) Muntiacus muntjak vaginalis H2A hi... 86 1e-15
EU652317_13(EU652317|pid:none) Philodina roseola GTP binding pro... 86 1e-15
BC160488_1(BC160488|pid:none) Xenopus tropicalis HIST1H2AH prote... 85 2e-15
AM494958_115(AM494958|pid:none) Leishmania braziliensis chromoso... 85 2e-15
BC088824_1(BC088824|pid:none) Xenopus laevis variant histone H2A... 85 3e-15
HSXLA2(I24510)histone H2A.2 - African clawed frog 84 3e-15
(P35066) RecName: Full=Histone H2A; &AC104504_6(AC104504|pid:no... 84 3e-15
AX885421_1(AX885421|pid:none) Sequence 1284 from Patent EP1033401. 84 4e-15
AC104504_7(AC104504|pid:none) Trypanosoma cruzi strain CL Brener... 84 4e-15
(P40279) RecName: Full=Histone H2A; &S46501(S46501) &X73147_1(X... 84 4e-15
EU961237_1(EU961237|pid:none) Zea mays clone 233739 histone H2A ... 83 1e-14
Y10371_1(Y10371|pid:none) T.cruzi mRNA for histone H2A, partial. 83 1e-14
AY223124_1(AY223124|pid:none) Schistosoma japonicum clone ZZD142... 82 1e-14
AJ494851_1(AJ494851|pid:none) Oikopleura dioica partial H2A.2 ge... 82 2e-14
AF315729_1(AF315729|pid:none) Carassius auratus histone H2A mRNA... 82 2e-14
AF315728_1(AF315728|pid:none) Carassius auratus gibelio histone ... 80 5e-14
AY223125_1(AY223125|pid:none) Schistosoma japonicum clone ZZD142... 80 6e-14
AM424762_1(AM424762|pid:none) Vitis vinifera contig VV78X141012.... 80 6e-14
(Q9T0H7) RecName: Full=Putative histone H2A.8; AltName: Full=H2A... 80 6e-14
FN357361_13(FN357361|pid:none) Schistosoma mansoni genome sequen... 80 6e-14
EU957906_1(EU957906|pid:none) Zea mays clone 1632149 histone H2A... 79 1e-13
U87597_1(U87597|pid:none) Crithidia fasciculata histone H2A (H2A... 79 1e-13
CT005260_114(CT005260|pid:none) Leishmania major strain Friedlin... 79 2e-13
AM502248_444(AM502248|pid:none) Leishmania infantum chromosome 3... 78 2e-13
AF336275_1(AF336275|pid:none) Leishmania infantum histone H2A (H... 78 3e-13
AK169003_1(AK169003|pid:none) Mus musculus 13 days embryo liver ... 77 5e-13
AJ419627_3(AJ419627|pid:none) Leishmania infantum H2A4 gene, H2A... 77 5e-13
(P27891) RecName: Full=Histone H2A.1; &AJ419627_1(AJ419627|pid:... 77 5e-13
(P27892) RecName: Full=Histone H2A.2; &S22391(S22391;S16861) &X... 76 9e-13
AJ419627_2(AJ419627|pid:none) Leishmania infantum H2A4 gene, H2A... 76 1e-12
(P09590) RecName: Full=Histone H2A-beta, sperm; Flags: Fragment;... 76 1e-12
AY821908_1(AY821908|pid:none) Gossypium hirsutum putative histon... 75 2e-12
AJ419626_1(AJ419626|pid:none) Leishmania infantum H2A1-2 gene fo... 75 2e-12
AK151462_1(AK151462|pid:none) Mus musculus bone marrow macrophag... 75 3e-12
AJ419625_1(AJ419625|pid:none) Leishmania infantum H2A1-1 gene, H... 75 3e-12
AJ419625_2(AJ419625|pid:none) Leishmania infantum H2A1-1 gene, H... 75 3e-12
AY198411_3(AY198411|pid:none) Leishmania mexicana paraflagellar ... 75 3e-12
AK303301_1(AK303301|pid:none) Homo sapiens cDNA FLJ52230 complet... 74 3e-12
AC155882_24(AC155882|pid:none) Medicago truncatula chromosome 7 ... 72 2e-11
S19241(I50649;S19241) histone H2A (clone CH1-10) - chicken (frag... 71 3e-11
CR954216_105(CR954216|pid:none) Ostreococcus tauri strain OTTH05... 69 1e-10
EU958597_1(EU958597|pid:none) Zea mays clone 1704636 histone H2A... 67 4e-10
EU546151_1(EU546151|pid:none) Cryptotermes cynocephalus female n... 66 1e-09
AB154525_1(AB154525|pid:none) Cucumis melo 6A06 mRNA for hypothe... 66 1e-09
(Q9LD75) RecName: Full=Histone H2A.2; AltName: Full=GH2A; &AB00... 65 2e-09
DQ173494_1(DQ173494|pid:none) Cyprinus carpio H2A histone family... 64 4e-09
AF139873_1(AF139873|pid:none) Giardia intestinalis histone H2A g... 64 6e-09
BC132811_1(BC132811|pid:none) Homo sapiens cDNA clone MGC:164442... 62 2e-08
EU958653_1(EU958653|pid:none) Zea mays clone 1708108 histone H2A... 59 1e-07
EU973812_1(EU973812|pid:none) Zea mays clone 417869 unknown mRNA. 59 2e-07
CU651580_4(CU651580|pid:none) Zebrafish DNA sequence from clone ... 57 6e-07
BC055199_1(BC055199|pid:none) Danio rerio zgc:63676, mRNA (cDNA ... 57 6e-07
BC151734_1(BC151734|pid:none) Bos taurus histone H2A.l (H2A/l), ... 57 7e-07
FN357319_10(FN357319|pid:none) Schistosoma mansoni genome sequen... 55 2e-06
M32467_1(M32467|pid:none) D.virilis histone (H2A) gene homologue... 54 4e-06
BX322550_3(BX322550|pid:none) Zebrafish DNA sequence from clone ... 54 6e-06
X07762_1(X07762|pid:none) Chicken DNA for pCH22.0B histone H2A/H... 52 2e-05
EU966722_1(EU966722|pid:none) Zea mays clone 296709 unknown mRNA. 52 2e-05
BT041601_1(BT041601|pid:none) Zea mays full-length cDNA clone ZM... 52 2e-05
BT036181_1(BT036181|pid:none) Zea mays full-length cDNA clone ZM... 52 2e-05
EU965198_1(EU965198|pid:none) Zea mays clone 284438 hypothetical... 52 2e-05
EU969598_1(EU969598|pid:none) Zea mays clone 332962 unknown mRNA. 52 2e-05
AK006586_1(AK006586|pid:none) Mus musculus adult male testis cDN... 51 3e-05
AK296014_1(AK296014|pid:none) Homo sapiens cDNA FLJ55076 complet... 51 3e-05
BC108245_1(BC108245|pid:none) Bos taurus testis-specific histone... 51 4e-05
FN357914_19(FN357914|pid:none) Schistosoma mansoni genome sequen... 50 5e-05
EU971464_1(EU971464|pid:none) Zea mays clone 365444 unknown mRNA. 50 9e-05
EU546162_1(EU546162|pid:none) Cryptotermes secundus female neote... 49 2e-04
X13894_1(X13894|pid:none) Chicken histone H2A.F gene. 49 2e-04
EU728805_1(EU728805|pid:none) Chromera velia isolate RM12 histon... 49 2e-04
DQ066891_1(DQ066891|pid:none) Bos taurus histone H2a mRNA, parti... 49 2e-04
EU315689_1(EU315689|pid:none) Mus musculus H2al2y protein mRNA, ... 47 5e-04
X14215_6(X14215|pid:none) Drosophila histone gene cluster, L for... 47 6e-04
EU958618_1(EU958618|pid:none) Zea mays clone 1705995 unknown mRNA. 46 0.001
(P0C5Z0) RecName: Full=Histone H2A-Bbd type 2/3; AltName: Full=H... 46 0.001
AC144503_17(AC144503|pid:none) Medicago truncatula clone mth2-13... 45 0.003
I37466(I37466) histone H2A - human (fragment) &X57985_1(X57985|... 44 0.007
L17501_1(L17501|pid:none) Mirounga leonina histone H2AF gene, ex... 43 0.011
(Q1LVW0) RecName: Full=Ankyrin repeat and BTB/POZ domain-contain... 42 0.015
(P82897) RecName: Full=Histone H2A; Flags: Fragment; 42 0.025
AX885780_1(AX885780|pid:none) Sequence 1643 from Patent EP1033401. 40 0.072
AC157373_11(AC157373|pid:none) Medicago truncatula chromosome 7 ... 40 0.072
BC049545_1(BC049545|pid:none) Mus musculus predicted gene, OTTMU... 39 0.16
AP004651_26(AP004651|pid:none) Oryza sativa Japonica Group genom... 39 0.21
AL672060_7(AL672060|pid:none) Mouse DNA sequence from clone RP23... 39 0.21
BX294183_3(BX294183|pid:none) Mouse DNA sequence from clone RP24... 39 0.21
AL671118_1(AL671118|pid:none) Mouse DNA sequence from clone RP23... 39 0.21
DQ311186_1(DQ311186|pid:none) Bombyx mori hydroxyacyl-coenzyme A... 38 0.27
AK005922_1(AK005922|pid:none) Mus musculus adult male testis cDN... 38 0.27
AP008212_767(AP008212|pid:none) Oryza sativa (japonica cultivar-... 38 0.36
DQ848898_1(DQ848898|pid:none) Scophthalmus maximus clone kaa133 ... 37 0.47
BC131870_1(BC131870|pid:none) Danio rerio zgc:158274, mRNA (cDNA... 37 0.61
AL833795_1(AL833795|pid:none) Mouse DNA sequence from clone RP23... 37 0.80
CP000680_360(CP000680|pid:none) Pseudomonas mendocina ymp, compl... 35 2.3
FN320987_1(FN320987|pid:none) Schistosoma japonicum isolate Anhu... 35 3.0
BC143367_1(BC143367|pid:none) Homo sapiens son of sevenless homo... 35 3.0
S25714(S25714) son-of-sevenless-2 protein - mouse (fragment) &Z... 35 3.0
AB209277_1(AB209277|pid:none) Homo sapiens mRNA for son of seven... 35 3.0
AM939959_1(AM939959|pid:none) Triticum turgidum subsp. durum par... 35 3.0
D83014_1(D83014|pid:none) Rattus norvegicus Sos1 mRNA for son of... 35 3.0
AM269996_125(AM269996|pid:none) Aspergillus niger contig An02c00... 35 3.0
(Q02384) RecName: Full=Son of sevenless homolog 2; Shor... 35 3.0
CP000438_5515(CP000438|pid:none) Pseudomonas aeruginosa UCBPP-PA... 34 4.0
AF216837_2(AF216837|pid:none) Drosophila virilis clone p3.6-33 h... 34 4.0
AF441482_1(AF441482|pid:none) Homo sapiens alternate SOS1 (SOS1)... 34 4.0
AY658883_1(AY658883|pid:none) Synthetic construct Peudomonas aer... 34 4.0
AC019171_1(AC019171|pid:none) Homo sapiens BAC clone RP11-173C1 ... 34 4.0
(Q07889) RecName: Full=Son of sevenless homolog 1; Shor... 34 4.0
A37488(A37488)Ras guanine nucleotide exchange factor son-of-seve... 34 4.0
BT015294_1(BT015294|pid:none) Drosophila melanogaster GH01796 fu... 34 5.2
(P26675) RecName: Full=Protein son of sevenless; &A41216(A41216... 34 5.2
(P0C7A6) RecName: Full=Ankyrin repeat and BTB/POZ domain-contain... 34 5.2
CP000744_5863(CP000744|pid:none) Pseudomonas aeruginosa PA7, com... 34 5.2
M83931_1(M83931|pid:none) Drosophila melanogaster son of sevenle... 34 5.2
(Q62245) RecName: Full=Son of sevenless homolog 1; Shor... 33 6.8
S25716(S25716;S21391) Ras guanine nucleotide exchange factor son... 33 6.8
AK140310_1(AK140310|pid:none) Mus musculus adult male adrenal gl... 33 6.8
AF233591_1(AF233591|pid:none) Mus musculus son-of-sevenless 1 (S... 33 6.8
CP001037_1204(CP001037|pid:none) Nostoc punctiforme PCC 73102, c... 33 8.8
BC146824_1(BC146824|pid:none) Homo sapiens BTB (POZ) domain cont... 33 8.8
(A6QL63) RecName: Full=Ankyrin repeat and BTB/POZ domain-contain... 33 8.8

>X06725_1(X06725|pid:none) Tetrahymena macronucleus mRNA for histone
H2A variant hv1.
Length = 138

Score = 110 bits (276), Expect = 3e-23
Identities = 67/109 (61%), Positives = 80/109 (73%), Gaps = 1/109 (0%)
Frame = +2

Query: 218 PVPKSTKAGLIFPVGRIHRMLKNKVPLK-RVSILSSVYLAAILEYLASEVLELTISQVSI 394
P +S KAGL FPVGRIHR LK +V K RV ++VY AAILEYL +EVLEL +
Sbjct: 19 PQSRSYKAGLQFPVGRIHRFLKGRVSAKNRVGATAAVYAAAILEYLTAEVLELAGNA--- 75

Query: 395 QSKEYHNVRRISPRHLLLAIKTDEELDNLIRVSTTIAGGGVIPYIHEVL 541
SK++ VRRI+PRHLLLAI+ DEELD LI+ TIAGGGVIP+IH+ L
Sbjct: 76 -SKDF-KVRRITPRHLLLAIRGDEELDILIK--ATIAGGGVIPHIHKAL 120

Lambda K H
0.318 0.134 0.401

Gapped
Lambda K H
0.267 0.0410 0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3236559
Number of Hits to DB: 609,429,439
Number of extensions: 7572606
Number of successful extensions: 23886
Number of sequences better than 10.0: 447
Number of HSP's gapped: 23122
Number of HSP's successfully gapped: 447
Length of query: 239
Length of database: 1,051,180,864
Length adjustment: 125
Effective length of query: 114
Effective length of database: 646,610,989
Effective search space: 73713652746
Effective search space used: 73713652746
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 31 (16.5 bits)

PSORT

psg: 0.50 gvh: 0.49 alm: 0.33 top: 0.53 tms: 0.00 mit: 0.45 mip: 0.08
nuc: 0.00 erl: 0.00 erm: 0.20 pox: 0.00 px2: 0.00 vac: 0.00 rnp: 0.00
act: 0.00 caa: 0.00 yqr: 0.00 tyr: 0.00 leu: 0.00 gpi: 0.00 myr: 0.00
dna: 0.12 rib: 0.00 bac: 0.00 m1a: 0.00 m1b: 0.00 m2 : 0.00 mNt: 0.00
m3a: 0.00 m3b: 0.00 m_ : 1.00

48.0 %: mitochondrial
32.0 %: cytoplasmic
12.0 %: nuclear
4.0 %: plasma membrane
4.0 %: peroxisomal

>> prediction for Contig-U14714-1 is mit

VS (DIR, S) 1
VH (FL, L) 1
VF (FL, S) 0
AH (FL, L) 0
AF (FL, S) 0
SL (DIR, L) 0
SS (DIR, S) 2
SH (FL, L) 0
SF (FL, S) 0
CH (FL, L) 0
CF (FL, S) 0
FCL (DIR, L) 0
FC (DIR, S) 0
FC-IC (SUB) 0