| Contig-U14701-1 |
| Contig ID |
Contig-U14701-1 |
| Contig update |
2002.12.18 |
| Contig sequence |
 |
| Gap |
no gap |
| Contig length |
1671 |
| Chromosome number (1..6, M) |
2 |
| Chromosome length |
8467578 |
| Start point |
984279 |
| End point |
985950 |
| Strand (PLUS/MINUS) |
PLUS |
| Number of clones |
4 |
| Number of EST |
5 |
| Link to clone list |
U14701 |
| List of clone(s) |
|
| Translated Amino Acid sequence |
|
| Translated Amino Acid sequence (All Frames) |
|
| own update |
2004. 6.10 |
| Homology vs CSM-cDNA |
|
| dna update |
2008.12.28 |
| Homology vs DNA |
Query= Contig-U14701-1 (Contig-U14701-1Q) /CSM_Contig/Contig-U14701-1Q.Seq.d
(1671 letters)
Database: ddbj_A
92,845,959 sequences; 95,242,211,685 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value N
(AC116925) Dictyostelium discoideum chromosome 2 map 4189423... 1697 0.0 3
(BJ413447) Dictyostelium discoideum cDNA clone:ddv15i16, 5' ... 1063 0.0 1
(AU076342) Dictyostelium discoideum slug cDNA, clone SSA619. 1035 0.0 3
(BJ429889) Dictyostelium discoideum cDNA clone:ddv5c07, 3' e... 1029 0.0 3
(BJ417265) Dictyostelium discoideum cDNA clone:ddv30e02, 5' ... 1003 0.0 1
(C83918) Dictyostelium discoideum slug cDNA, clone SSA619. 672 0.0 3
(BJ411652) Dictyostelium discoideum cDNA clone:ddv5c07, 5' e... 856 0.0 1
(AC116957) Dictyostelium discoideum chromosome 2 map 1685067... 38 3e-07 18
(AC116984) Dictyostelium discoideum chromosome 2 map 2567470... 38 1e-06 22
(AC116956) Dictyostelium discoideum chromosome 2 map 1418423... 42 8e-05 15
(AC116305) Dictyostelium discoideum chromosome 2 map 1005175... 36 1e-04 20
(CU469464) Candidatus Phytoplasma mali strain AT complete ch... 34 0.002 18
(AC117075) Dictyostelium discoideum chromosome 2 map 5201047... 36 0.003 16
(AP008934) Staphylococcus saprophyticus subsp. saprophyticus... 38 0.004 28
(CP000123) Mycoplasma capricolum subsp. capricolum ATCC 2734... 38 0.004 22
(AF063866) Melanoplus sanguinipes entomopoxvirus, complete g... 36 0.005 14
(AC116960) Dictyostelium discoideum chromosome 2 map complem... 32 0.009 14
(AC116551) Dictyostelium discoideum chromosome 2 map complem... 34 0.026 12
(AC117176) Dictyostelium discoideum chromosome 2 map 5018074... 32 0.032 13
(AE017243) Mycoplasma hyopneumoniae J, complete genome. 34 0.034 22
(AE017263) Mesoplasma florum L1 complete genome. 44 0.039 22
(AC116963) Dictyostelium discoideum chromosome 2 map 4657875... 32 0.054 16
(AC115680) Dictyostelium discoideum chromosome 2 map 4915084... 34 0.063 8
(CR392003) Zebrafish DNA sequence from clone DKEY-242N9 in l... 52 0.070 1
(AC146500) Danio rerio clone CH211-130P22, complete sequence. 52 0.070 1
(AZ192856) SP_1022_A2_F07_T7A Strongylocentrotus purpuratus,... 44 0.074 2
(AC116982) Dictyostelium discoideum chromosome 2 map 3622643... 36 0.076 13
(AC138449) Medicago truncatula clone mth2-14o23, complete se... 32 0.11 6
(AE002148) Ureaplasma parvum serovar 3 str. ATCC 700970 sect... 30 0.12 7
(CP000721) Clostridium beijerinckii NCIMB 8052, complete gen... 40 0.18 26
(CP000673) Clostridium kluyveri DSM 555, complete genome. 44 0.26 19
(AY159040) Dictyostelium discoideum LvsD (lvsD) gene, partia... 32 0.27 6
(AE017244) Mycoplasma hyopneumoniae 7448, complete genome. 34 0.30 22
(CP000361) Arcobacter butzleri RM4018, complete genome. 36 0.34 19
(FH196225) CHO_OF3054xk13r1.ab1 CHO_OF3 Nicotiana tabacum ge... 44 0.35 2
(AC116924) Dictyostelium discoideum chromosome 2 map 6357117... 32 0.37 10
(CP000727) Clostridium botulinum A str. Hall, complete genome. 36 0.61 21
(CU850000) A BAC library has been constructed from PN40024 g... 38 0.78 2
(AC117081) Dictyostelium discoideum chromosome 2 map 5862124... 34 0.78 11
(CP000102) Methanosphaera stadtmanae DSM 3091, complete genome. 34 0.79 21
(EX632204) 256335449 Pea aphid whole body normalized full le... 36 0.93 3
(CP001056) Clostridium botulinum B str. Eklund 17B, complete... 34 0.98 19
(AC087737) Homo sapiens chromosome 15 clone RP11-947O24 map ... 36 1.0 8
(CP000263) Buchnera aphidicola str. Cc (Cinara cedri), compl... 34 1.1 17
(AL133546) Human DNA sequence from clone RP1-29A6 on chromos... 48 1.1 1
(AC092924) Homo sapiens 3 BAC RP11-788A4 (Roswell Park Cance... 48 1.1 1
(AC135383) Rattus norvegicus clone CH230-267N1, WORKING DRAF... 48 1.1 1
(AC135039) Rattus norvegicus clone CH230-178I12, WORKING DRA... 48 1.1 1
(AC120975) Rattus norvegicus clone CH230-151I12, WORKING DRA... 48 1.1 1
(AC111403) Rattus norvegicus clone CH230-95P17, WORKING DRAF... 48 1.1 1
(AC067899) Homo sapiens chromosome 3 clone RP11-788A4 map 3,... 48 1.1 1
(AL928982) Human DNA sequence *** SEQUENCING CANCELLED *** f... 48 1.1 1
(AC231840) Homo sapiens chromosome X clone RP11-650J24, WORK... 48 1.1 1
(AC231757) Homo sapiens chromosome X clone RP11-809A2, WORKI... 48 1.1 1
(AC213884) Zea mays chromosome 6 clone CH201-237A9; ZMMBBc02... 48 1.1 1
(AC178547) Strongylocentrotus purpuratus clone R3-3027F07, W... 48 1.1 1
(AC176886) Strongylocentrotus purpuratus clone R3-31I6, WORK... 48 1.1 1
(AC176702) Strongylocentrotus purpuratus clone R3-3088N13, W... 48 1.1 1
(AC021662) Homo sapiens chromosome 3 clone RP11-310M7, WORKI... 48 1.1 1
(ET718778) CHO_OF115xj18r1.ab1 CHO_OF Nicotiana tabacum geno... 48 1.1 1
(ET692453) CHO_OF332xl01r1.ab1 CHO_OF Nicotiana tabacum geno... 48 1.1 1
(FE759710) CAYF7097.g3 CAYF Petrolisthes cinctipes heart, wh... 48 1.1 1
(FE759709) CAYF7097.b3 CAYF Petrolisthes cinctipes heart, wh... 48 1.1 1
(AC173371) Strongylocentrotus purpuratus clone R3-14D2, WORK... 42 1.1 7
(AC117076) Dictyostelium discoideum chromosome 2 map 3323568... 34 1.2 11
(AC018561) Homo sapiens clone RP11-1N8, WORKING DRAFT SEQUEN... 32 1.3 13
(BH157238) ENTRJ65TF Entamoeba histolytica Sheared DNA Entam... 34 1.4 3
(CP000939) Clostridium botulinum B1 str. Okra, complete genome. 36 1.4 22
(AZ530481) ENTBH03TR Entamoeba histolytica Sheared DNA Entam... 34 1.4 3
(BX640580) Zebrafish DNA sequence from clone CH211-278A6 in ... 36 1.5 6
(AL929352) Plasmodium falciparum strain 3D7, chromosome 5, s... 36 1.6 11
(AM574384) Paracentrotus lividus EST, clone MPMGp1173O10128Q... 32 1.7 3
(AC115598) Dictyostelium discoideum chromosome 2 map 581427-... 38 1.7 11
(EK510839) 1095515476997 Global-Ocean-Sampling_GS-32-01-01-1... 40 1.8 2
(AC116986) Dictyostelium discoideum chromosome 2 map 2234041... 32 1.8 13
(AY894835) Phytophthora infestans haplotype Ia mitochondrion... 32 2.1 7
(U17009) Phytophthora infestans mitochondrion, complete genome. 32 2.1 7
(CP000726) Clostridium botulinum A str. ATCC 19397, complete... 36 2.1 21
(AC180029) Strongylocentrotus purpuratus clone R3-23N1, WORK... 32 2.1 2
(CR450687) Zebrafish DNA sequence from clone CH211-204A13 in... 32 2.2 2
(AM412317) Clostridium botulinum A str. ATCC 3502 complete g... 38 2.2 21
(AM453715) Vitis vinifera contig VV78X210284.5, whole genome... 36 2.4 2
(DX545081) GH_MBb0080F01f GH_MBb Gossypium hirsutum genomic ... 34 2.8 2
(CU794435) A BAC library has been constructed from PN40024 g... 36 2.9 2
(EX650393) 256740449 Pea aphid whole body normalized full le... 36 2.9 2
(DX438321) BE1094_H05_R IASMA L1 HindIII BAC library Vitis v... 36 2.9 2
(CP000111) Prochlorococcus marinus str. MIT 9312, complete g... 36 3.1 21
(AM451938) Vitis vinifera, whole genome shotgun sequence, co... 36 3.1 4
(CR954187) Medicago truncatula chromosome 5 clone mth2-181i2... 40 3.5 8
(AM478160) Vitis vinifera, whole genome shotgun sequence, co... 40 3.6 5
(AC177761) Strongylocentrotus purpuratus clone R3-1005I17, W... 46 3.8 3
(DD119950) STAPHYLOCOCCUS AUREUS PROTEINS AND NUCLEIC ACIDS. 32 4.0 3
(CS708673) Sequence 1213 from Patent EP1829892. 32 4.0 3
(AX618250) Sequence 1213 from Patent WO02094868. 32 4.0 3
(AC146681) Medicago truncatula clone mth2-77o10, complete se... 32 4.0 11
(EC821998) SME00004118 esmbsro2 Sawyeria marylandensis cDNA,... 44 4.2 2
(CU571074) Zebrafish DNA sequence from clone CH73-21K16 in l... 46 4.3 1
(CU302319) Zebrafish DNA sequence from clone DKEY-108M3. 46 4.3 1
(BX088554) Zebrafish DNA sequence from clone DKEYP-4F12 in l... 46 4.3 1
(BX005434) Zebrafish DNA sequence from clone DKEY-106M21. 46 4.3 1
>(AC116925) Dictyostelium discoideum chromosome 2 map 4189423-4228998
strain AX4, complete sequence.
Length = 39575
Score = 1697 bits (856), Expect(3) = 0.0
Identities = 859/860 (99%)
Strand = Plus / Minus
Query: 656 ttatcaatgaaaacacaatggatatttatatcacaccttccaatgtcattggtggtaaac 715
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 29433 ttatcaatgaaaacacaatggatatttatatcacaccttccaatgtcattggtggtaaac 29374
Query: 716 caactgcatcatttaaatattctggtgaagataaatatttaccagttataatattagcaa 775
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 29373 caactgcatcatttaaatattctggtgaagataaatatttaccagttataatattagcaa 29314
Query: 776 ccaccaccaccacaagtaatagttcaacatcaacattaaactattcatttaaaatgtcaa 835
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 29313 ccaccaccaccacaagtaatagttcaacatcaacattaaactattcatttaaaatgtcaa 29254
Query: 836 gtcaatcaatttatattacaggtaattgtgatattaatggtggaattcaaattattacag 895
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 29253 gtcaatcaatttatattacaggtaattgtgatattaatggtggaattcaaattattacag 29194
Query: 896 taccaattttagatcctgagcaatactttttaacagtattctcagcattgttggaagatg 955
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 29193 taccaattttagatcctgagcaatactttttaacagtattctcagcattgttggaagatg 29134
Query: 956 gtggcgttgaaattagtcaaacagctattggtagttgtaattacactggtatggattata 1015
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 29133 gtggcgttgaaattagtcaaacagctattggtagttgtaattacactggtatggattata 29074
Query: 1016 aatcatttgaagtgatttcacccgaattatcagaaatgttaaattatacattattaacat 1075
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 29073 aatcatttgaagtgatttcacccgaattatcagaaatgttaaattatacattattaacat 29014
Query: 1076 caaataatttatatgctgaaacttttctcagacaaatgggcacttttaattcagcagctt 1135
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 29013 caaataatttatatgctgaaacttttctcagacaaatgggcacttttaattcagcagctt 28954
Query: 1136 ctgaatcaacaccaacttatcaagctggtttagaatatattcaacaaacattatcaattc 1195
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 28953 ctgaatcaacaccaacttatcaagctggtttagaatatattcaacaaacattatcaattc 28894
Query: 1196 caacatcattatatactcaagtggatggttctggtttaagtagaaataatttcattacac 1255
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 28893 caacatcattatatactcaagtggatggttctggtttaagtagaaataatttcattacac 28834
Query: 1256 caaaatcattaatagcagttattgaaaatgtttatacaaatgttggtgatccacaacatg 1315
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 28833 caaaatcattaataacagttattgaaaatgtttatacaaatgttggtgatccacaacatg 28774
Query: 1316 actatatctcatatttacccgttgcatcattatcaggtaccctatcgaaacgtttcatta 1375
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 28773 actatatctcatatttacccgttgcatcattatcaggtaccctatcgaaacgtttcatta 28714
Query: 1376 atacacccgccagtggtatagtccatgcaaaaactggttcaatgactggtgttaattctc 1435
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 28713 atacacccgccagtggtatagtccatgcaaaaactggttcaatgactggtgttaattctc 28654
Query: 1436 taactggtgtcattttaccaaatggtctttctgatgatcaacaaaattcaatattctttt 1495
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 28653 taactggtgtcattttaccaaatggtctttctgatgatcaacaaaattcaatattctttt 28594
Query: 1496 caataattgcaaataatagt 1515
||||||||||||||||||||
Sbjct: 28593 caataattgcaaataatagt 28574
Score = 1130 bits (570), Expect(3) = 0.0
Identities = 570/570 (100%)
Strand = Plus / Minus
Query: 85 ggtcaaataaaatttctttaaaagatagtgatagcggaagtaacggtaatcaagatattc 144
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 30003 ggtcaaataaaatttctttaaaagatagtgatagcggaagtaacggtaatcaagatattc 29944
Query: 145 aaattttaataaatgatattttaaataattgttcatcaagtgaaagtagttcatgctttg 204
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 29943 aaattttaataaatgatattttaaataattgttcatcaagtgaaagtagttcatgctttg 29884
Query: 205 gtacacaatggggtgttgtagcagatatttatacaccaagtaatggagaatttacaaata 264
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 29883 gtacacaatggggtgttgtagcagatatttatacaccaagtaatggagaatttacaaata 29824
Query: 265 ttttcagtttaaatgaattacaagcatttacaccagcaagtaatacaaaattatttacaa 324
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 29823 ttttcagtttaaatgaattacaagcatttacaccagcaagtaatacaaaattatttacaa 29764
Query: 325 caattagtattttctatacatttggtgaagatttcaaagtttttacaccattttttacag 384
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 29763 caattagtattttctatacatttggtgaagatttcaaagtttttacaccattttttacag 29704
Query: 385 ataaaccatttaatagtgttagtggtggtagtagtaatagtgaattagatttcatttgtg 444
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 29703 ataaaccatttaatagtgttagtggtggtagtagtaatagtgaattagatttcatttgtg 29644
Query: 445 tcaaaggtatgggtgatccatcaatgtcaattgataatttaattgaagcagcaaaattct 504
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 29643 tcaaaggtatgggtgatccatcaatgtcaattgataatttaattgaagcagcaaaattct 29584
Query: 505 tttcatcaaatccaacaatgaaaaaagttaataaattattattggatactagcttctata 564
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 29583 tttcatcaaatccaacaatgaaaaaagttaataaattattattggatactagcttctata 29524
Query: 565 atattggtaatggagttgatggtaatattccaagtgcttgggaatgggaagatttaactt 624
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 29523 atattggtaatggagttgatggtaatattccaagtgcttgggaatgggaagatttaactt 29464
Query: 625 caacctatggttcaattccaacaccattaa 654
||||||||||||||||||||||||||||||
Sbjct: 29463 caacctatggttcaattccaacaccattaa 29434
Score = 151 bits (76), Expect(3) = 0.0
Identities = 76/76 (100%)
Strand = Plus / Minus
Query: 1517 cctgctcaaaatactgatataattgatataattgaccaaattgtaattttattaactaaa 1576
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 28573 cctgctcaaaatactgatataattgatataattgaccaaattgtaattttattaactaaa 28514
Query: 1577 tttattttatcatctt 1592
||||||||||||||||
Sbjct: 28513 tttattttatcatctt 28498
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Number of Sequences: 92845959
Number of Hits to DB: 2,031,461,236
Number of extensions: 129852416
Number of successful extensions: 11931590
Number of sequences better than 10.0: 214
Length of query: 1671
Length of database: 95,242,211,685
Length adjustment: 24
Effective length of query: 1647
Effective length of database: 97,308,875,965
Effective search space: 160267718714355
Effective search space used: 160267718714355
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)
|
| protein update |
2009. 7.12 |
| Homology vs Protein |
Query= Contig-U14701-1 (Contig-U14701-1Q) /CSM_Contig/Contig-U14701-1Q.Seq.d
(1671 letters)
Database: nrp_B
3,236,559 sequences; 1,051,180,864 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC116925_15(AC116925|pid:none) Dictyostelium discoideum chromoso... 508 0.0
AD2014(AD2014) hypothetical protein alr1666 [imported] - Nostoc ... 110 2e-34
CP000117_667(CP000117|pid:none) Anabaena variabilis ATCC 29413, ... 109 6e-33
CP001100_1068(CP001100|pid:none) Chloroherpeton thalassium ATCC ... 78 4e-20
CP000393_3643(CP000393|pid:none) Trichodesmium erythraeum IMS101... 98 8e-19
CP001229_557(CP001229|pid:none) Sulfurihydrogenibium azorense Az... 67 4e-17
CP001291_4226(CP001291|pid:none) Cyanothece sp. PCC 7424, comple... 90 3e-16
AP008955_3090(AP008955|pid:none) Brevibacillus brevis NBRC 10059... 86 3e-15
AP009552_4624(AP009552|pid:none) Microcystis aeruginosa NIES-843... 84 1e-14
CP000931_2040(CP000931|pid:none) Shewanella halifaxensis HAW-EB4... 68 2e-14
AP006627_2686(AP006627|pid:none) Bacillus clausii KSM-K16 DNA, c... 66 1e-13
AP009552_5323(AP009552|pid:none) Microcystis aeruginosa NIES-843... 81 1e-13
CP000951_802(CP000951|pid:none) Synechococcus sp. PCC 7002, comp... 79 6e-13
CP000100_1932(CP000100|pid:none) Synechococcus elongatus PCC 794... 78 1e-12
CP000806_2329(CP000806|pid:none) Cyanothece sp. ATCC 51142 circu... 76 3e-12
CP000806_1777(CP000806|pid:none) Cyanothece sp. ATCC 51142 circu... 76 4e-12
CP001287_842(CP001287|pid:none) Cyanothece sp. PCC 8801, complet... 75 5e-12
AM420293_5543(AM420293|pid:none) Saccharopolyspora erythraea NRR... 74 1e-11
(P39844) RecName: Full=D-alanyl-D-alanine carboxypeptidase dacC;... 59 5e-11
CR628336_2647(CR628336|pid:none) Legionella pneumophila str. Par... 72 6e-11
CR628337_2522(CR628337|pid:none) Legionella pneumophila str. Len... 72 6e-11
AE017354_2539(AE017354|pid:none) Legionella pneumophila subsp. p... 72 6e-11
CP001344_424(CP001344|pid:none) Cyanothece sp. PCC 7425, complet... 72 8e-11
CP000961_2302(CP000961|pid:none) Shewanella woodyi ATCC 51908, c... 59 1e-10
CP000769_3884(CP000769|pid:none) Anaeromyxobacter sp. Fw109-5, c... 70 2e-10
CT573071_1396(CT573071|pid:none) Kuenenia stuttgartiensis genome... 70 3e-10
(P39045) RecName: Full=D-alanyl-D-alanine carboxypeptidase; ... 69 4e-10
CP000937_1702(CP000937|pid:none) Francisella philomiragia subsp.... 69 7e-10
CP000139_1069(CP000139|pid:none) Bacteroides vulgatus ATCC 8482,... 68 9e-10
AJ749949_1039(AJ749949|pid:none) Francisella tularensis subsp. t... 68 9e-10
AY774661_1(AY774661|pid:none) Synthetic construct Francisella tu... 68 9e-10
CP000446_1924(CP000446|pid:none) Shewanella sp. MR-4, complete g... 67 2e-09
CP000915_727(CP000915|pid:none) Francisella tularensis subsp. me... 67 2e-09
CP000803_877(CP000803|pid:none) Francisella tularensis subsp. ho... 67 2e-09
BA000022_1527(BA000022|pid:none) Synechocystis sp. PCC 6803 DNA,... 67 3e-09
CP000509_431(CP000509|pid:none) Nocardioides sp. JS614, complete... 66 3e-09
CP000469_1971(CP000469|pid:none) Shewanella sp. ANA-3, complete ... 65 6e-09
CP000851_2073(CP000851|pid:none) Shewanella pealeana ATCC 700345... 65 6e-09
BX842655_38(BX842655|pid:none) Bdellovibrio bacteriovorus comple... 65 6e-09
CP000447_1903(CP000447|pid:none) Shewanella frigidimarina NCIMB ... 65 1e-08
BA000028_3145(BA000028|pid:none) Oceanobacillus iheyensis HTE831... 64 2e-08
CP001055_689(CP001055|pid:none) Elusimicrobium minutum Pei191, c... 64 2e-08
BA000039_1374(BA000039|pid:none) Thermosynechococcus elongatus B... 63 4e-08
FM211050_42(FM211050|pid:none) Photorhabdus asymbiotica subsp. a... 63 4e-08
AE017333_2029(AE017333|pid:none) Bacillus licheniformis DSM 13, ... 63 4e-08
CP000511_5300(CP000511|pid:none) Mycobacterium vanbaalenii PYR-1... 62 5e-08
AP009153_2461(AP009153|pid:none) Gemmatimonas aurantiaca T-27 DN... 62 6e-08
CP000503_1960(CP000503|pid:none) Shewanella sp. W3-18-1, complet... 62 6e-08
CP000828_1761(CP000828|pid:none) Acaryochloris marina MBIC11017,... 62 8e-08
CP000472_2395(CP000472|pid:none) Shewanella piezotolerans WP3, c... 62 8e-08
AM942759_3377(AM942759|pid:none) Proteus mirabilis strain HI4320... 61 1e-07
CP000681_2019(CP000681|pid:none) Shewanella putrefaciens CN-32, ... 61 1e-07
CP001600_431(CP001600|pid:none) Edwardsiella ictaluri 93-146, co... 61 1e-07
CP000733_119(CP000733|pid:none) Coxiella burnetii Dugway 5J108-1... 61 1e-07
CP000890_1902(CP000890|pid:none) Coxiella burnetii RSA 331, comp... 61 1e-07
AE003849_1610(AE003849|pid:none) Xylella fastidiosa 9a5c, comple... 61 1e-07
CR378664_235(CR378664|pid:none) Photobacterium profundum SS9; se... 61 1e-07
CP000850_4567(CP000850|pid:none) Salinispora arenicola CNS-205, ... 60 2e-07
CP001601_2239(CP001601|pid:none) Corynebacterium aurimucosum ATC... 60 2e-07
CP000878_880(CP000878|pid:none) Prochlorococcus marinus str. MIT... 60 2e-07
CP000820_298(CP000820|pid:none) Frankia sp. EAN1pec, complete ge... 60 2e-07
CP000159_1050(CP000159|pid:none) Salinibacter ruber DSM 13855, c... 60 2e-07
CP000113_3047(CP000113|pid:none) Myxococcus xanthus DK 1622, com... 60 2e-07
BX950851_684(BX950851|pid:none) Erwinia carotovora subsp. atrose... 60 3e-07
AC0426(AC0426) serine-type D-Ala-D-Ala carboxypeptidase (EC 3.4.... 60 3e-07
CP001052_3206(CP001052|pid:none) Burkholderia phytofirmans PsJN ... 60 3e-07
AP009044_2653(AP009044|pid:none) Corynebacterium glutamicum R DN... 60 3e-07
AY259243_1(AY259243|pid:none) Yersinia pseudotuberculosis (type ... 60 3e-07
CP000653_3583(CP000653|pid:none) Enterobacter sp. 638, complete ... 59 4e-07
CP001020_183(CP001020|pid:none) Coxiella burnetii CbuK_Q154, com... 59 4e-07
CU458896_515(CU458896|pid:none) Mycobacterium abscessus chromoso... 59 4e-07
AL023093_20(AL023093|pid:none) Mycobacterium leprae cosmid B2548... 59 5e-07
CP000384_4760(CP000384|pid:none) Mycobacterium sp. MCS, complete... 59 5e-07
CP001252_2035(CP001252|pid:none) Shewanella baltica OS223, compl... 59 5e-07
CP000825_1004(CP000825|pid:none) Prochlorococcus marinus str. MI... 59 5e-07
CP000481_198(CP000481|pid:none) Acidothermus cellulolyticus 11B ... 59 7e-07
BA000031_2468(BA000031|pid:none) Vibrio parahaemolyticus RIMD 22... 58 1e-06
CR555306_1259(CR555306|pid:none) Azoarcus sp. EbN1 complete geno... 58 1e-06
CP000891_2374(CP000891|pid:none) Shewanella baltica OS195, compl... 58 1e-06
CP000270_3698(CP000270|pid:none) Burkholderia xenovorans LB400 c... 58 1e-06
CU928158_3060(CU928158|pid:none) Escherichia fergusonii ATCC 354... 57 2e-06
CP001102_907(CP001102|pid:none) Candidatus Amoebophilus asiaticu... 57 2e-06
BX927156_47(BX927156|pid:none) Corynebacterium glutamicum ATCC 1... 57 2e-06
BA000036_2699(BA000036|pid:none) Corynebacterium glutamicum ATCC... 57 2e-06
CP000284_378(CP000284|pid:none) Methylobacillus flagellatus KT, ... 57 2e-06
(P24228) RecName: Full=D-alanyl-D-alanine carboxypeptidase dacB;... 57 2e-06
FM180568_3461(FM180568|pid:none) Escherichia coli 0127:H6 E2348/... 57 2e-06
CP000576_975(CP000576|pid:none) Prochlorococcus marinus str. MIT... 57 2e-06
CP000247_3239(CP000247|pid:none) Escherichia coli 536, complete ... 57 2e-06
CP000822_4455(CP000822|pid:none) Citrobacter koseri ATCC BAA-895... 57 2e-06
CP001634_852(CP001634|pid:none) Kosmotoga olearia TBF 19.5.1, co... 57 2e-06
AE005174_4082(AE005174|pid:none) Escherichia coli O157:H7 EDL933... 57 2e-06
CR626927_24(CR626927|pid:none) Bacteroides fragilis NCTC 9343, c... 57 2e-06
CU651637_3070(CU651637|pid:none) Escherichia coli LF82 chromosom... 57 2e-06
CU928162_3747(CU928162|pid:none) Escherichia coli ED1a chromosom... 57 2e-06
CP000038_3106(CP000038|pid:none) Shigella sonnei Ss046, complete... 57 2e-06
AE005674_3224(AE005674|pid:none) Shigella flexneri 2a str. 301, ... 57 2e-06
AP009240_3466(AP009240|pid:none) Escherichia coli SE11 DNA, comp... 57 2e-06
BX842583_229(BX842583|pid:none) Mycobacterium tuberculosis H37Rv... 57 2e-06
CP000111_974(CP000111|pid:none) Prochlorococcus marinus str. MIT... 57 3e-06
CP000857_3259(CP000857|pid:none) Salmonella enterica subsp. ente... 57 3e-06
AM933172_3119(AM933172|pid:none) Salmonella enterica subsp. ente... 57 3e-06
AM286415_405(AM286415|pid:none) Yersinia enterocolitica subsp. e... 57 3e-06
AE017220_3238(AE017220|pid:none) Salmonella enterica subsp. ente... 57 3e-06
AC0903(AC0903) Penicillin-binding protein (D-alanyl-D-alanine ca... 57 3e-06
CP001138_3246(CP001138|pid:none) Salmonella enterica subsp. ente... 57 3e-06
CP000088_2896(CP000088|pid:none) Thermobifida fusca YX, complete... 57 3e-06
CP000435_1332(CP000435|pid:none) Synechococcus sp. CC9311, compl... 56 3e-06
CP000800_3488(CP000800|pid:none) Escherichia coli E24377A, compl... 56 3e-06
CP001100_919(CP001100|pid:none) Chloroherpeton thalassium ATCC 3... 56 5e-06
CP000551_973(CP000551|pid:none) Prochlorococcus marinus str. AS9... 56 5e-06
AP006725_4444(AP006725|pid:none) Klebsiella pneumoniae NTUH-K204... 56 5e-06
AM747720_2827(AM747720|pid:none) Burkholderia cenocepacia J2315 ... 56 5e-06
CP001616_2651(CP001616|pid:none) Tolumonas auensis DSM 9187, com... 55 6e-06
CP000302_1765(CP000302|pid:none) Shewanella denitrificans OS217,... 55 6e-06
CP000826_477(CP000826|pid:none) Serratia proteamaculans 568, com... 55 6e-06
AM490803_1(AM490803|pid:none) Haemophilus influenzae dacB gene f... 55 8e-06
AM490809_1(AM490809|pid:none) Haemophilus influenzae dacB gene f... 55 8e-06
CP000958_2627(CP000958|pid:none) Burkholderia cenocepacia MC0-3 ... 55 8e-06
AM490804_1(AM490804|pid:none) Haemophilus influenzae dacB gene f... 55 8e-06
AM490807_1(AM490807|pid:none) Haemophilus influenzae dacB gene f... 55 8e-06
AB035864_1(AB035864|pid:none) Haemophilus influenzae dacB gene f... 55 8e-06
CP000325_3457(CP000325|pid:none) Mycobacterium ulcerans Agy99, c... 55 8e-06
CP000479_506(CP000479|pid:none) Mycobacterium avium 104, complet... 55 1e-05
AJ576102_48(AJ576102|pid:none) Bacillus amyloliquefaciens partia... 55 1e-05
CP000771_1270(CP000771|pid:none) Fervidobacterium nodosum Rt17-B... 54 1e-05
CP000474_126(CP000474|pid:none) Arthrobacter aurescens TC1, comp... 54 1e-05
CP000753_2236(CP000753|pid:none) Shewanella baltica OS185, compl... 54 1e-05
CP000151_2761(CP000151|pid:none) Burkholderia sp. 383 chromosome... 54 1e-05
CP000854_5060(CP000854|pid:none) Mycobacterium marinum M, comple... 54 2e-05
CP000304_2331(CP000304|pid:none) Pseudomonas stutzeri A1501, com... 54 2e-05
CP001281_794(CP001281|pid:none) Thauera sp. MZ1T, complete genome. 53 3e-05
CP000249_4262(CP000249|pid:none) Frankia sp. CcI3, complete geno... 53 4e-05
CP000614_2697(CP000614|pid:none) Burkholderia vietnamiensis G4 c... 52 5e-05
CP000746_1433(CP000746|pid:none) Actinobacillus succinogenes 130... 52 5e-05
CP000510_3109(CP000510|pid:none) Psychromonas ingrahamii 37, com... 52 5e-05
CP000951_516(CP000951|pid:none) Synechococcus sp. PCC 7002, comp... 52 6e-05
BA000037_2721(BA000037|pid:none) Vibrio vulnificus YJ016 DNA, ch... 52 6e-05
BA000035_2541(BA000035|pid:none) Corynebacterium efficiens YS-31... 52 8e-05
CP000438_1970(CP000438|pid:none) Pseudomonas aeruginosa UCBPP-PA... 52 8e-05
CP000454_147(CP000454|pid:none) Arthrobacter sp. FB24, complete ... 52 8e-05
CP000089_421(CP000089|pid:none) Dechloromonas aromatica RCB, com... 52 8e-05
BX548174_1012(BX548174|pid:none) Prochlorococcus marinus MED4 co... 51 1e-04
AE016827_960(AE016827|pid:none) Mannheimia succiniciproducens MB... 51 1e-04
CP000507_1737(CP000507|pid:none) Shewanella amazonensis SB2B, co... 51 1e-04
CP000572_844(CP000572|pid:none) Burkholderia pseudomallei 1106a ... 50 2e-04
CP000570_840(CP000570|pid:none) Burkholderia pseudomallei 668 ch... 50 2e-04
CP000526_593(CP000526|pid:none) Burkholderia mallei SAVP1 chromo... 50 2e-04
BX571965_814(BX571965|pid:none) Burkholderia pseudomallei strain... 50 2e-04
CU207366_2720(CU207366|pid:none) Gramella forsetii KT0803 comple... 50 2e-04
CP000124_998(CP000124|pid:none) Burkholderia pseudomallei 1710b ... 50 2e-04
CP000744_2068(CP000744|pid:none) Pseudomonas aeruginosa PA7, com... 50 2e-04
AM167904_845(AM167904|pid:none) Bordetella avium 197N complete g... 50 2e-04
CP000750_524(CP000750|pid:none) Kineococcus radiotolerans SRS302... 50 3e-04
AP009385_2527(AP009385|pid:none) Burkholderia multivorans ATCC 1... 50 3e-04
CP000383_1342(CP000383|pid:none) Cytophaga hutchinsonii ATCC 334... 49 4e-04
CP000789_3293(CP000789|pid:none) Vibrio harveyi ATCC BAA-1116 ch... 49 4e-04
BX569692_196(BX569692|pid:none) Synechococcus sp. WH8102 complet... 49 4e-04
CP000316_4538(CP000316|pid:none) Polaromonas sp. JS666, complete... 49 6e-04
CP001132_1588(CP001132|pid:none) Acidithiobacillus ferrooxidans ... 49 6e-04
CP000097_1101(CP000097|pid:none) Synechococcus sp. CC9902, compl... 49 6e-04
BX640426_176(BX640426|pid:none) Bordetella parapertussis strain ... 49 6e-04
BX640414_51(BX640414|pid:none) Bordetella pertussis strain Toham... 49 6e-04
CP000554_1488(CP000554|pid:none) Prochlorococcus marinus str. MI... 49 6e-04
AP009152_1932(AP009152|pid:none) Kocuria rhizophila DC2201 DNA, ... 49 7e-04
CT978603_1194(CT978603|pid:none) Synechococcus sp. RCC307 genomi... 48 0.001
AM902716_3657(AM902716|pid:none) Bordetella petrii strain DSM 12... 48 0.001
CP000075_2110(CP000075|pid:none) Pseudomonas syringae pv. syring... 48 0.001
CP000513_119(CP000513|pid:none) Dichelobacter nodosus VCS1703A, ... 48 0.001
CP000094_1789(CP000094|pid:none) Pseudomonas fluorescens Pf0-1, ... 47 0.002
AL157959_598(AL157959|pid:none) Neisseria meningitidis serogroup... 47 0.002
CP001050_151(CP001050|pid:none) Neisseria gonorrhoeae NCCP11945,... 47 0.002
CP000381_406(CP000381|pid:none) Neisseria meningitidis 053442, c... 47 0.002
FM178379_587(FM178379|pid:none) Aliivibrio salmonicida LFI1238 c... 47 0.002
CU207211_588(CU207211|pid:none) Herminiimonas arsenicoxydans chr... 47 0.002
CP000859_2219(CP000859|pid:none) Desulfococcus oleovorans Hxd3, ... 47 0.003
AE004439_716(AE004439|pid:none) Pasteurella multocida subsp. mul... 47 0.003
CP000103_2347(CP000103|pid:none) Nitrosospira multiformis ATCC 2... 47 0.003
CP000058_1988(CP000058|pid:none) Pseudomonas syringae pv. phaseo... 47 0.003
AE017261_15(AE017261|pid:none) Picrophilus torridus DSM 9790, co... 45 0.006
CP000110_1339(CP000110|pid:none) Synechococcus sp. CC9605, compl... 45 0.006
CT573326_3489(CT573326|pid:none) Pseudomonas entomophila str. L4... 45 0.006
AP009380_896(AP009380|pid:none) Porphyromonas gingivalis ATCC 33... 45 0.006
CP001139_458(CP001139|pid:none) Vibrio fischeri MJ11 chromosome ... 45 0.006
AE015924_1218(AE015924|pid:none) Porphyromonas gingivalis W83, c... 45 0.006
CP000949_1616(CP000949|pid:none) Pseudomonas putida W619, comple... 45 0.008
AL939126_126(AL939126|pid:none) Streptomyces coelicolor A3(2) co... 45 0.008
EF531339_150(EF531339|pid:none) Candidatus Chloracidobacterium t... 45 0.008
CP000552_966(CP000552|pid:none) Prochlorococcus marinus str. MIT... 45 0.010
CP000539_3789(CP000539|pid:none) Acidovorax sp. JS42, complete g... 44 0.014
CP001392_3228(CP001392|pid:none) Diaphorobacter sp. TPSY, comple... 44 0.014
AM286690_1965(AM286690|pid:none) Alcanivorax borkumensis SK2, co... 44 0.018
CR522870_2814(CR522870|pid:none) Desulfotalea psychrophila LSv54... 44 0.018
CP000910_3179(CP000910|pid:none) Renibacterium salmoninarum ATCC... 44 0.018
CP000815_130(CP000815|pid:none) Paulinella chromatophora chromat... 44 0.023
CP001515_474(CP001515|pid:none) Bifidobacterium animalis subsp. ... 44 0.023
CP000926_1599(CP000926|pid:none) Pseudomonas putida GB-1, comple... 43 0.030
CP000269_600(CP000269|pid:none) Janthinobacterium sp. Marseille,... 43 0.030
CP001287_1746(CP001287|pid:none) Cyanothece sp. PCC 8801, comple... 43 0.039
CP000140_3267(CP000140|pid:none) Parabacteroides distasonis ATCC... 42 0.051
CP000514_2167(CP000514|pid:none) Marinobacter aquaeolei VT8, com... 42 0.051
CP000879_1706(CP000879|pid:none) Petrotoga mobilis SJ95, complet... 42 0.067
AM746676_7256(AM746676|pid:none) Sorangium cellulosum 'So ce 56'... 42 0.067
CP000090_564(CP000090|pid:none) Ralstonia eutropha JMP134 chromo... 41 0.11
AE016825_1125(AE016825|pid:none) Chromobacterium violaceum ATCC ... 41 0.11
CP000713_547(CP000713|pid:none) Psychrobacter sp. PRwf-1, comple... 41 0.11
AM942444_1704(AM942444|pid:none) Corynebacterium urealyticum DSM... 41 0.11
AE015451_2078(AE015451|pid:none) Pseudomonas putida KT2440 compl... 41 0.15
CP000712_3588(CP000712|pid:none) Pseudomonas putida F1, complete... 41 0.15
CU914168_627(CU914168|pid:none) Ralstonia solanacearum strain IP... 41 0.15
CP000352_508(CP000352|pid:none) Ralstonia metallidurans CH34, co... 41 0.15
AM711867_2087(AM711867|pid:none) Clavibacter michiganensis subsp... 41 0.15
AM260479_572(AM260479|pid:none) Ralstonia eutropha H16 chromosom... 40 0.20
CU633749_525(CU633749|pid:none) Cupriavidus taiwanensis str. LMG... 40 0.26
CP001068_488(CP001068|pid:none) Ralstonia pickettii 12J chromoso... 40 0.26
CP000109_794(CP000109|pid:none) Thiomicrospira crunogena XCL-2, ... 40 0.33
CR628336_1429(CR628336|pid:none) Legionella pneumophila str. Par... 40 0.33
CP000806_943(CP000806|pid:none) Cyanothece sp. ATCC 51142 circul... 39 0.44
CP001628_109(CP001628|pid:none) Micrococcus luteus NCTC 2665, co... 39 0.57
CP001013_368(CP001013|pid:none) Leptothrix cholodnii SP-6, compl... 39 0.74
CP001037_1355(CP001037|pid:none) Nostoc punctiforme PCC 73102, c... 38 0.97
CP000393_1542(CP000393|pid:none) Trichodesmium erythraeum IMS101... 38 0.97
AE017354_1444(AE017354|pid:none) Legionella pneumophila subsp. p... 37 1.7
CP001037_2308(CP001037|pid:none) Nostoc punctiforme PCC 73102, c... 37 2.2
CP000478_2693(CP000478|pid:none) Syntrophobacter fumaroxidans MP... 37 2.2
CP000239_32(CP000239|pid:none) Synechococcus sp. JA-3-3Ab, compl... 37 2.8
CP001176_757(CP001176|pid:none) Bacillus cereus B4264, complete ... 36 3.7
CP000553_993(CP000553|pid:none) Prochlorococcus marinus str. NAT... 36 3.7
CP001037_4412(CP001037|pid:none) Nostoc punctiforme PCC 73102, c... 36 3.7
CP000095_947(CP000095|pid:none) Prochlorococcus marinus str. NAT... 36 3.7
T23739(T23739)hypothetical protein M106.2 - Caenorhabditis elegans 36 4.8
Z46935_3(Z46935|pid:none) Caenorhabditis elegans Cosmid M106, co... 36 4.8
DQ517526_204(DQ517526|pid:none) Escherichia coli APEC O1 plasmid... 36 4.8
AF1813(AF1813) hypothetical protein alr0054 [imported] - Nostoc ... 36 4.8
AM286415_3812(AM286415|pid:none) Yersinia enterocolitica subsp. ... 36 4.8
CP001186_729(CP001186|pid:none) Bacillus cereus G9842, complete ... 36 4.8
CP000562_2084(CP000562|pid:none) Methanoculleus marisnigri JR1, ... 35 6.3
CP000117_2643(CP000117|pid:none) Anabaena variabilis ATCC 29413,... 35 6.3
CP000555_300(CP000555|pid:none) Methylibium petroleiphilum PM1, ... 35 6.3
(A4TGU2) RecName: Full=3-dehydroquinate synthase; EC=4.... 35 8.2
>AC116925_15(AC116925|pid:none) Dictyostelium discoideum chromosome 2
map 4189423-4228998 strain AX4, complete sequence.
Length = 522
Score = 508 bits (1307), Expect(3) = 0.0
Identities = 261/287 (90%), Positives = 262/287 (91%)
Frame = +1
Query: 655 VINENTMDIYITPSNVIGGKPTASFKYSGEDKYLPVIILAXXXXXXXXXXXXLNYSFKMS 834
+INENTMDIYITPSNVIGGKPTASFKYSGEDKYLPVIILA LNYSFKMS
Sbjct: 211 IINENTMDIYITPSNVIGGKPTASFKYSGEDKYLPVIILATTTTTSNSSTSTLNYSFKMS 270
Query: 835 SQSIYITGNCDINGGIQIITVPILDPEQYFLTVFSALLEDGGVEISQTAIGSCNYTGMDY 1014
SQSIYITGNCDINGGIQIITVPILDPEQYFLTVFSALLEDGGVEISQTAIGSCNYTGMDY
Sbjct: 271 SQSIYITGNCDINGGIQIITVPILDPEQYFLTVFSALLEDGGVEISQTAIGSCNYTGMDY 330
Query: 1015 KSFEVISPELSEMXXXXXXXXXXXXAETFLRQMGTFNSAASESTPTYQAGLEYIQQTLSI 1194
KSFEVISPELSEM AETFLRQMGTFNSAASESTPTYQAGLEYIQQTLSI
Sbjct: 331 KSFEVISPELSEMLNYTLLTSNNLYAETFLRQMGTFNSAASESTPTYQAGLEYIQQTLSI 390
Query: 1195 PTSLYTQVDGSGLSRNNFITPKSLIAVIENVYTNVGDPQHDYISYLPVASLSGTLSKRFI 1374
PTSLYTQVDGSGLSRNNFITPKSLI VIENVYTNVGDPQHDYISYLPVASLSGTLSKRFI
Sbjct: 391 PTSLYTQVDGSGLSRNNFITPKSLITVIENVYTNVGDPQHDYISYLPVASLSGTLSKRFI 450
Query: 1375 NTPASGIVHAKTGSMTGVNSLTGVILPNGLSDDQQNSIFFSIIANNS 1515
NTPASGIVHAKTGSMTGVNSLTGVILPNGLSDDQQNSIFFSIIANNS
Sbjct: 451 NTPASGIVHAKTGSMTGVNSLTGVILPNGLSDDQQNSIFFSIIANNS 497
Score = 347 bits (891), Expect(3) = 0.0
Identities = 174/210 (82%), Positives = 174/210 (82%)
Frame = +3
Query: 24 MKNYKXXXXXXXXXXXXXXXRSNKISLKDSDSGSNGXXXXXXXXXXXXXXCXXXXXXXCF 203
MKNYK RSNKISLKDSDSGSNG C CF
Sbjct: 1 MKNYKIITLLLIISILFNIIRSNKISLKDSDSGSNGNQDIQILINDILNNCSSSESSSCF 60
Query: 204 GTQWGVVADIYTPSNGEFTNIFSLNELQAFTPASNTKLFTTISIFYTFGEDFKVFTPFFT 383
GTQWGVVADIYTPSNGEFTNIFSLNELQAFTPASNTKLFTTISIFYTFGEDFKVFTPFFT
Sbjct: 61 GTQWGVVADIYTPSNGEFTNIFSLNELQAFTPASNTKLFTTISIFYTFGEDFKVFTPFFT 120
Query: 384 DKPFNSVSGGSSNSELDFICVKGMGDPSMSIDNLIEAAKFFSSNPTMKKVNKLLLDTSFY 563
DKPFNSVSGGSSNSELDFICVKGMGDPSMSIDNLIEAAKFFSSNPTMKKVNKLLLDTSFY
Sbjct: 121 DKPFNSVSGGSSNSELDFICVKGMGDPSMSIDNLIEAAKFFSSNPTMKKVNKLLLDTSFY 180
Query: 564 NIGNGVDGNIPSAWEWEDLTSTYGSIPTPL 653
NIGNGVDGNIPSAWEWEDLTSTYGSIPTPL
Sbjct: 181 NIGNGVDGNIPSAWEWEDLTSTYGSIPTPL 210
Score = 26.2 bits (56), Expect(3) = 0.0
Identities = 14/25 (56%), Positives = 14/25 (56%)
Frame = +2
Query: 1517 PAQNTXXXXXXXXXXXLLTKFILSS 1591
PAQNT LLTKFILSS
Sbjct: 498 PAQNTDIIDIIDQIVILLTKFILSS 522
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3236559
Number of Hits to DB: 2,207,715,983
Number of extensions: 42122179
Number of successful extensions: 108542
Number of sequences better than 10.0: 240
Number of HSP's gapped: 108198
Number of HSP's successfully gapped: 350
Length of query: 557
Length of database: 1,051,180,864
Length adjustment: 134
Effective length of query: 423
Effective length of database: 617,481,958
Effective search space: 261194868234
Effective search space used: 261194868234
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)
|
| PSORT |
|
| VS (DIR, S) |
0 |
| VH (FL, L) |
0 |
| VF (FL, S) |
3 |
| AH (FL, L) |
0 |
| AF (FL, S) |
0 |
| SL (DIR, L) |
0 |
| SS (DIR, S) |
1 |
| SH (FL, L) |
0 |
| SF (FL, S) |
0 |
| CH (FL, L) |
0 |
| CF (FL, S) |
0 |
| FCL (DIR, L) |
0 |
| FC (DIR, S) |
0 |
| FC-IC (SUB) |
0 |