Contig-U14691-1
Contig ID Contig-U14691-1
Contig update 2002.12.18
Contig sequence
>Contig-U14691-1 (Contig-U14691-1Q) /CSM_Contig/Contig-U14691-1Q.Seq.d
AATAATAATAATAATAAATCAAAAACTGATGATACAACAAATTCTGCTAC
AACTACAACAACAACCACTACAACTACAACAACAACAACTACAACCAATT
CAACAACAACAACAACACAATTAAATAATGGTAAAAATTTAATTGGATTA
GTTTATAATGATAAAGATGAAGTTATTGCAGGTGAAAGAGATAAAATTAT
TGGATTATTTACAGATATTTCAAAAGTGACAGGTACACAATTTTTAGAGG
AATTTTTATTTACATATCATTATTATATGACATCAGTTGATTTATTAGAG
AATTTAAAGGGTAGATTTAATAATCCATTAATGGATCAAGCAGCACAATC
AATATCAATACTTGAAGAGAATCATGACAAAGTAAAGATTGAGCAGCTTT
CAACACATATTAGACTTCGTGTTATTAATGTAATAAAGAAATGGATTGAA
AATCATGGTTATGCATTCGCAACCGATATTAACCTGTATCAAATGTTGGT
GGACTTTATAGATGGTGATGTGATGTCGTTCAGTCAAAGATGGGGCCAAT
ATTTGAAAAAGGCAATCAATGATAGTGGCTGTCTATTACGATATATAGCT
GTCAATGTAAAAGAAGCATCCTCCAAACAATTGCGTGAAATCATCTCATT
GGATAATTTAGATGCAATCTCAAAATTAATGTCACAATCATTACAATTGA
AAGAACGTAAAAAAGGTTTAAAAGTTATTAAAAATTCATTCACAGGTAAT
GAAGCTGTAGAATGGTTAATTAATAAATTCAATTTAGATTCAAAAGATGA
AGCACTTGAAACTTTATCAAAAATGTTACAATCAAATTTAATTTTTCATC
ATTCAAAATCTGGTTCTTCATTTTCTCCATCCTCCTCCTCCTCCTCAACA
ACAACAACGACAACAACATCATCATCATCATCGAGTTCGAATACAACAAC
TGCAAATATGGCATCATCATCTTCTGCAACCGATAATAGCAGCAGTGGTG
GTGTTGTAACTTCTTCATCATCTTCTTCATCATCATCATCTTCTTCACCA
TCAAATGGAAATGGTACAACAGCTATAACGAGTACAAGTTTACCAAATTC
TATATCATCATCAAATTCAACATCAATTTTAACATCATTAGTTGTAAATA
GTAATAGTAGTGGAATTGCTAATGGTTCCTCAACTCCATCAATACCATCA
TCTGTAACATCACCTTTAACAAATTCAAAATCGACTTTAAATTCTACCCC
TTCATCATCATCAAATTCTTTTACTTTTAAAGATAAATCAACAAGTATCT
ATTATTTTATATTTGAAAATATTAATTTTCCAGAACCAATTGTACCAAAA
ACATTTTTTTCATCACCAAATTCAACATTTTCAATTACATTTTTAGATAT
TCATCCAGTTGAAATCGCTAGACAATTGACATTAATTGATTATGAGTTAT
TTAAAAAATTATCACCAACTGATTTCTATCATACAGCATGGAGTAAACCA
GATGCAAAAGAGAAAGTACCAAATTTAATCAATTTTATCAATAGATCCAA
TACCGTTAGTTATTGGGTTGCCACAGAGATTTTATCATCTTCAAATATAA
AACATCGTGTTTCAGTTTTAAAAAGATTCATCACTATCGCTGAAATCCTT
AGAAAATTTCATAATTGGAATACTCTCACTGGTATTTTAATGGGTTTAAA
TTTAGGTTCAATTCAACGTTTAAAGAAAACTTGGGAATCTATTGATAAGA
AACAATTGGATTCACTTCAAAATTTAATTAATCTAACAAGTGAACGTTTA
AATTATTCAAATTATCGTAAAGAAATGTCAACTCCAACTTATCCTTGTTT
ACCTTTTATGGCTGTATATTTAAAAGATTTATATTTTATTGAAGAAAATC
CTGATTATTTAGAAAATGGTTATATTAATTTTGAAAAAATGAAAATGATT
TCTAAAGTTTTAATTGAAATTAAAAGATATCAAACTGAACAATATTGGTT
AAAGAAAATAGATGCAATTGAAAATATATTGAAATCAGTTGTTTTAACTG
ATAAAGATTTATATAAAGCTTCACATATGATTGAACAACCTCAAAGAACA
ATGACTGTTGGTTCAAATTTAAAAGCTCAATCATTTTTAACAACAACAAC
AACAACTACCACTACAAATAATTTAAATAATAATAATAATAATAATAATC
CAAATAATAATAATAATAATAATAATAATAGCGCTAATAATAAATCTTCA
CCATCTCCATCACCCTCCTCCTCTCCAATTACTTCATCACCAATATCATC
ATTAACAATTAACAACAACAATACGATTTCATCAAATTTATCAGCTTCAA
CTGATAGTAGTATAAATACAAAAAAGAAATCTTCTTTCTTAATGTTTGGA
AAGAAATAATAAAAAAAAAAAAAA

Gap no gap
Contig length 2424
Chromosome number (1..6, M) 5
Chromosome length 5062330
Start point 3050541
End point 3052965
Strand (PLUS/MINUS) PLUS
Number of clones 2
Number of EST 3
Link to clone list U14691
List of clone(s)

est1=VHC309F,1,530
est2=SLH890E,310,2425
est3=VHC309Z,1704,2402
Translated Amino Acid sequence
NNNNNKSKTDDTTNSATTTTTTTTTTTTTTTTNSTTTTTQLNNGKNLIGLVYNDKDEVIA
GERDKIIGLFTDISKVTGTQFLEEFLFTYHYYMTSVDLLENLKGRFNNPLMDQAAQSISI
LEENHDKVKIEQLSTHIRLRVINVIKKWIENHGYAFATDINLYQMLVDFIDGDVMSFSQR
WGQYLKKAINDSGCLLRYIAVNVKEASSKQLREIISLDNLDAISKLMSQSLQLKERKKGL
KVIKNSFTGNEAVEWLINKFNLDSKDEALETLSKMLQSNLIFHHSKSGSSFSPSSSSSST
TTTTTTSSSSSSSNTTTANMASSSSATDNSSSGGVVTSSSSSSSSSSSSPSNGNGTTAIT
STSLPNSISSSNSTSILTSLVVNSNSSGIANGSSTPSIPSSVTSPLTNSKSTLNSTPSSS
SNSFTFKDKSTSIYYFIFENINFPEPIVPKTFFSSPNSTFSITFLDIHPVEIARQLTLID
YELFKKLSPTDFYHTAWSKPDAKEKVPNLINFINRSNTVSYWVATEILSSSNIKHRVSVL
KRFITIAEILRKFHNWNTLTGILMGLNLGSIQRLKKTWESIDKKQLDSLQNLINLTSERL
NYSNYRKEMSTPTYPCLPFMAVYLKDLYFIEENPDYLENGYINFEKMKMISKVLIEIKRY
QTEQYWLKKIDAIENILKSVVLTDKDLYKASHMIEQPQRTMTVGSNLKAQSFLTTTTTTT
TTNNLNNNNNNNNPNNNNNNNNNSANNKSSPSPSPSSSPITSSPISSLTINNNNTISSNL
SASTDSSINTKKKSSFLMFGKK**kkkk


Translated Amino Acid sequence (All Frames)
Frame A:
NNNNNKSKTDDTTNSATTTTTTTTTTTTTTTTNSTTTTTQLNNGKNLIGLVYNDKDEVIA
GERDKIIGLFTDISKVTGTQFLEEFLFTYHYYMTSVDLLENLKGRFNNPLMDQAAQSISI
LEENHDKVKIEQLSTHIRLRVINVIKKWIENHGYAFATDINLYQMLVDFIDGDVMSFSQR
WGQYLKKAINDSGCLLRYIAVNVKEASSKQLREIISLDNLDAISKLMSQSLQLKERKKGL
KVIKNSFTGNEAVEWLINKFNLDSKDEALETLSKMLQSNLIFHHSKSGSSFSPSSSSSST
TTTTTTSSSSSSSNTTTANMASSSSATDNSSSGGVVTSSSSSSSSSSSSPSNGNGTTAIT
STSLPNSISSSNSTSILTSLVVNSNSSGIANGSSTPSIPSSVTSPLTNSKSTLNSTPSSS
SNSFTFKDKSTSIYYFIFENINFPEPIVPKTFFSSPNSTFSITFLDIHPVEIARQLTLID
YELFKKLSPTDFYHTAWSKPDAKEKVPNLINFINRSNTVSYWVATEILSSSNIKHRVSVL
KRFITIAEILRKFHNWNTLTGILMGLNLGSIQRLKKTWESIDKKQLDSLQNLINLTSERL
NYSNYRKEMSTPTYPCLPFMAVYLKDLYFIEENPDYLENGYINFEKMKMISKVLIEIKRY
QTEQYWLKKIDAIENILKSVVLTDKDLYKASHMIEQPQRTMTVGSNLKAQSFLTTTTTTT
TTNNLNNNNNNNNPNNNNNNNNNSANNKSSPSPSPSSSPITSSPISSLTINNNNTISSNL
SASTDSSINTKKKSSFLMFGKK**kkkk


Frame B:
iiiiinqklmiqqillqlqqqplqlqqqqlqpiqqqqqhn*imvki*ld*fimikmkllq
vkeiklldylqifqk*qvhnf*rnfylhiiii*hqliy*ri*rvdliih*wikqhnqyqy
lkrimtk*rlssfqhildfvllm**rnglkimvmhsqpiltcikcwwtl*mvm*crsvkd
gani*krqsmivavyydi*lsm*kkhppnncvksshwii*mqsqn*chnhyn*knvkkv*
kllkihsqvmkl*ng*linsi*iqkmkhlklyqkcynqi*ffiiqnlvlhflhpppppqq
qqrqqhhhhhrvriqqlqiwhhhllqpiiaavvvl*llhhllhhhhllhhqmemvqql*r
vqvyqilyhhqiqhqf*hh*l*ivivvellmvpqlhqyhhl*hhl*qiqnrl*ilplhhh
qillllkinqqvsiilylkilifqnqlyqkhffhhqiqhfqlhf*ifiqlksldn*h*li
msylknyhqlisiiqhgvnqmqkrkyqi*silsidpiplviglpqrfyhlqi*nivfqf*
kdsslslkslenfiigilslvf*wv*i*vqfnv*rklgnllirnnwihfki*li*qvnv*
iiqiivkkcqlqlilvyllwlyi*kiyillkkilii*kmvililkk*k*flkf*lklkdi
klnnig*rk*mqlkiy*nqlf*likiyiklhi*lnnlkeq*llvqi*klnhf*qqqqqlp
lqii*iiiiiiiiqiiiiiiiiialiinlhhlhhppplqllhhqyhh*qltttirfhqiy
qlqlivv*iqkrnlls*clernnkkkk


Frame C:
*****ikn**ynkfcynynnnhynynnnnynqfnnnnntik*w*kfnwisl***r*sycr
*kr*nywiiyryfksdrytifrgifiyisllydis*firefkg*i**singssstinint
*res*qskd*aafnty*tscy*cnkemd*kswlcirnry*pvsnvgglyrw*cdvvqskm
gpifekgnq**wlsitiyscqckrsilqtia*nhlig*frcnlkinvtiitiert*krfk
sy*kfihr**scrmvn**iqfrfkr*st*nfiknvtikfnfssfkiwffifsilllllnn
nndnniiiiiefeynnckygiiifcnr**qqwwccnffiiffiiiifftikwkwynsyne
ykftkfyiiikfninfniisck****wnc*wflnsintiicnitfnkfkidfkfypfiii
kffyf*r*inkyllfyi*ky*fsrtnctkniffitkfnifnyifrysss*nr*tidin*l
*vi*kiitn*flsysme*trckrestkfnqfyq*iqyr*llgchrdfiifkyktscfsfk
kihhyr*np*kis*leyshwyfngfkfrfnstfkenlgiy**etigftskfn*snk*tfk
lfkls*rnvnsnlslftfygcifkrfify*rks*lfrkwly*f*knendf*sfn*n*kis
n*tilvkenrcn*kyieiscfn**rfi*sftyd*ttsknndcwfkfkssiifnnnnnnyh
yk*fk*******sk*********r***iftisitlllsnyfitniiinn*qqqydfikfi
sfn***ykykkeifflnvwkeiikkkk


own update 2004. 6.10
Homology vs CSM-cDNA
Query= Contig-U14691-1 (Contig-U14691-1Q)
/CSM_Contig/Contig-U14691-1Q.Seq.d
(2424 letters)

Database: CSM
6905 sequences; 5,674,871 total letters


Score E
Sequences producing significant alignments: (bits) Value

Contig-U14691-1 (Contig-U14691-1Q) /CSM_Contig/Conti... 2109 0.0
Contig-U00886-1 (Contig-U00886-1Q) /CSM_Contig/Conti... 44 7e-04
Contig-U13225-1 (Contig-U13225-1Q) /CSM_Contig/Conti... 40 0.011
Contig-U11845-1 (Contig-U11845-1Q) /CSM_Contig/Conti... 40 0.011
Contig-U11203-1 (Contig-U11203-1Q) /CSM_Contig/Conti... 40 0.011
Contig-U06698-1 (Contig-U06698-1Q) /CSM_Contig/Conti... 40 0.011
Contig-U01321-1 (Contig-U01321-1Q) /CSM_Contig/Conti... 40 0.011
Contig-U12717-1 (Contig-U12717-1Q) /CSM_Contig/Conti... 38 0.044
Contig-U12500-1 (Contig-U12500-1Q) /CSM_Contig/Conti... 38 0.044
Contig-U12335-1 (Contig-U12335-1Q) /CSM_Contig/Conti... 38 0.044

>Contig-U14691-1 (Contig-U14691-1Q) /CSM_Contig/Contig-U14691-1Q.Seq.d
Length = 2424

Score = 2109 bits (1064), Expect = 0.0
Identities = 1078/1085 (99%)
Strand = Plus / Plus


Query: 1054 aatggaaatggtacaacagctataacgagtacaagtttaccaaattctatatcatcatca 1113
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1054 aatggaaatggtacaacagctataacgagtacaagtttaccaaattctatatcatcatca 1113


Query: 1114 aattcaacatcaattttaacatcattagttgtaaatagtaatagtagtggaattgctaat 1173
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1114 aattcaacatcaattttaacatcattagttgtaaatagtaatagtagtggaattgctaat 1173


Query: 1174 ggttcctcaactccatcaataccatcatctgtaacatcacctttaacaaattcaaaatcg 1233
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1174 ggttcctcaactccatcaataccatcatctgtaacatcacctttaacaaattcaaaatcg 1233


Query: 1234 actttaaattctaccccttcatcatcatcaaattcttttacttttaaagataaatcaaca 1293
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1234 actttaaattctaccccttcatcatcatcaaattcttttacttttaaagataaatcaaca 1293


Query: 1294 agtatctattattttatatttgaaaatattaattttccagaaccaattgtaccaaaaaca 1353
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1294 agtatctattattttatatttgaaaatattaattttccagaaccaattgtaccaaaaaca 1353


Query: 1354 nnnnnnncatcaccaaattcaacattttcaattacatttttagatattcatccagttgaa 1413
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1354 tttttttcatcaccaaattcaacattttcaattacatttttagatattcatccagttgaa 1413


Query: 1414 atcgctagacaattgacattaattgattatgagttatttaaaaaattatcaccaactgat 1473
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1414 atcgctagacaattgacattaattgattatgagttatttaaaaaattatcaccaactgat 1473


Query: 1474 ttctatcatacagcatggagtaaaccagatgcaaaagagaaagtaccaaatttaatcaat 1533
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1474 ttctatcatacagcatggagtaaaccagatgcaaaagagaaagtaccaaatttaatcaat 1533


Query: 1534 tttatcaatagatccaataccgttagttattgggttgccacagagattttatcatcttca 1593
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1534 tttatcaatagatccaataccgttagttattgggttgccacagagattttatcatcttca 1593


Query: 1594 aatataaaacatcgtgtttcagttttaaaaagattcatcactatcgctgaaatccttaga 1653
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1594 aatataaaacatcgtgtttcagttttaaaaagattcatcactatcgctgaaatccttaga 1653


Query: 1654 aaatttcataattggaatactctcactggtattttaatgggtttaaatttaggttcaatt 1713
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1654 aaatttcataattggaatactctcactggtattttaatgggtttaaatttaggttcaatt 1713


Query: 1714 caacgtttaaagaaaacttgggaatctattgataagaaacaattggattcacttcaaaat 1773
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1714 caacgtttaaagaaaacttgggaatctattgataagaaacaattggattcacttcaaaat 1773


Query: 1774 ttaattaatctaacaagtgaacgtttaaattattcaaattatcgtaaagaaatgtcaact 1833
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1774 ttaattaatctaacaagtgaacgtttaaattattcaaattatcgtaaagaaatgtcaact 1833


Query: 1834 ccaacttatccttgtttaccttttatggctgtatatttaaaagatttatattttattgaa 1893
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1834 ccaacttatccttgtttaccttttatggctgtatatttaaaagatttatattttattgaa 1893


Query: 1894 gaaaatcctgattatttagaaaatggttatattaattttgaaaaaatgaaaatgatttct 1953
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1894 gaaaatcctgattatttagaaaatggttatattaattttgaaaaaatgaaaatgatttct 1953


Query: 1954 aaagttttaattgaaattaaaagatatcaaactgaacaatattggttaaagaaaatagat 2013
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1954 aaagttttaattgaaattaaaagatatcaaactgaacaatattggttaaagaaaatagat 2013


Query: 2014 gcaattgaaaatatattgaaatcagttgttttaactgataaagatttatataaagcttca 2073
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2014 gcaattgaaaatatattgaaatcagttgttttaactgataaagatttatataaagcttca 2073


Query: 2074 catatgattgaacaacctcaaagaacaatgactgttggttcaaatttaaaagctcaatca 2133
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2074 catatgattgaacaacctcaaagaacaatgactgttggttcaaatttaaaagctcaatca 2133


Query: 2134 ttttt 2138
|||||
Sbjct: 2134 ttttt 2138


Score = 1495 bits (754), Expect = 0.0
Identities = 754/754 (100%)
Strand = Plus / Plus


Query: 121 ttaaataatggtaaaaatttaattggattagtttataatgataaagatgaagttattgca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ttaaataatggtaaaaatttaattggattagtttataatgataaagatgaagttattgca 180


Query: 181 ggtgaaagagataaaattattggattatttacagatatttcaaaagtgacaggtacacaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ggtgaaagagataaaattattggattatttacagatatttcaaaagtgacaggtacacaa 240


Query: 241 tttttagaggaatttttatttacatatcattattatatgacatcagttgatttattagag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tttttagaggaatttttatttacatatcattattatatgacatcagttgatttattagag 300


Query: 301 aatttaaagggtagatttaataatccattaatggatcaagcagcacaatcaatatcaata 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 aatttaaagggtagatttaataatccattaatggatcaagcagcacaatcaatatcaata 360


Query: 361 cttgaagagaatcatgacaaagtaaagattgagcagctttcaacacatattagacttcgt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 cttgaagagaatcatgacaaagtaaagattgagcagctttcaacacatattagacttcgt 420


Query: 421 gttattaatgtaataaagaaatggattgaaaatcatggttatgcattcgcaaccgatatt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 gttattaatgtaataaagaaatggattgaaaatcatggttatgcattcgcaaccgatatt 480


Query: 481 aacctgtatcaaatgttggtggactttatagatggtgatgtgatgtcgttcagtcaaaga 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 aacctgtatcaaatgttggtggactttatagatggtgatgtgatgtcgttcagtcaaaga 540


Query: 541 tggggccaatatttgaaaaaggcaatcaatgatagtggctgtctattacgatatatagct 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 tggggccaatatttgaaaaaggcaatcaatgatagtggctgtctattacgatatatagct 600


Query: 601 gtcaatgtaaaagaagcatcctccaaacaattgcgtgaaatcatctcattggataattta 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 gtcaatgtaaaagaagcatcctccaaacaattgcgtgaaatcatctcattggataattta 660


Query: 661 gatgcaatctcaaaattaatgtcacaatcattacaattgaaagaacgtaaaaaaggttta 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 gatgcaatctcaaaattaatgtcacaatcattacaattgaaagaacgtaaaaaaggttta 720


Query: 721 aaagttattaaaaattcattcacaggtaatgaagctgtagaatggttaattaataaattc 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 aaagttattaaaaattcattcacaggtaatgaagctgtagaatggttaattaataaattc 780


Query: 781 aatttagattcaaaagatgaagcacttgaaactttatcaaaaatgttacaatcaaattta 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 aatttagattcaaaagatgaagcacttgaaactttatcaaaaatgttacaatcaaattta 840


Query: 841 atttttcatcattcaaaatctggttcttcatttt 874
||||||||||||||||||||||||||||||||||
Sbjct: 841 atttttcatcattcaaaatctggttcttcatttt 874


Score = 327 bits (165), Expect = 3e-89
Identities = 165/165 (100%)
Strand = Plus / Plus


Query: 2246 cttcaccatctccatcaccctcctcctctccaattacttcatcaccaatatcatcattaa 2305
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2246 cttcaccatctccatcaccctcctcctctccaattacttcatcaccaatatcatcattaa 2305


Query: 2306 caattaacaacaacaatacgatttcatcaaatttatcagcttcaactgatagtagtataa 2365
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2306 caattaacaacaacaatacgatttcatcaaatttatcagcttcaactgatagtagtataa 2365


Query: 2366 atacaaaaaagaaatcttctttcttaatgtttggaaagaaataat 2410
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2366 atacaaaaaagaaatcttctttcttaatgtttggaaagaaataat 2410


Score = 178 bits (90), Expect = 2e-44
Identities = 90/90 (100%)
Strand = Plus / Plus


Query: 919 tcatcatcatcatcgagttcgaatacaacaactgcaaatatggcatcatcatcttctgca 978
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 919 tcatcatcatcatcgagttcgaatacaacaactgcaaatatggcatcatcatcttctgca 978


Query: 979 accgataatagcagcagtggtggtgttgta 1008
||||||||||||||||||||||||||||||
Sbjct: 979 accgataatagcagcagtggtggtgttgta 1008


>Contig-U00886-1 (Contig-U00886-1Q) /CSM_Contig/Contig-U00886-1Q.Seq.d
Length = 851

Score = 44.1 bits (22), Expect = 7e-04
Identities = 31/34 (91%)
Strand = Plus / Plus


Query: 126 taatggtaaaaatttaattggattagtttataat 159
|||||||| |||||| |||||||||||||||||
Sbjct: 145 taatggtagtaatttagttggattagtttataat 178


>Contig-U13225-1 (Contig-U13225-1Q) /CSM_Contig/Contig-U13225-1Q.Seq.d
Length = 554

Score = 40.1 bits (20), Expect = 0.011
Identities = 20/20 (100%)
Strand = Plus / Minus


Query: 2105 ctgttggttcaaatttaaaa 2124
||||||||||||||||||||
Sbjct: 193 ctgttggttcaaatttaaaa 174


Database: CSM
Posted date: Jun 9, 2004 7:35 PM
Number of letters in database: 5,674,871
Number of sequences in database: 6905

Lambda K H
1.37 0.711 1.31

Gapped
Lambda K H
1.37 0.711 1.31


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 57,198
Number of Sequences: 6905
Number of extensions: 57198
Number of successful extensions: 7522
Number of sequences better than 10.0: 253
length of query: 2424
length of database: 5,674,871
effective HSP length: 16
effective length of query: 2408
effective length of database: 5,564,391
effective search space: 13399053528
effective search space used: 13399053528
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 16 (32.2 bits)
dna update 2008.12.28
Homology vs DNA
Query= Contig-U14691-1 (Contig-U14691-1Q) /CSM_Contig/Contig-U14691-1Q.Seq.d
(2424 letters)

Database: ddbj_A
92,845,959 sequences; 95,242,211,685 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value N

(AY254473) Dictyostelium discoideum nucleotide exchange fact... 1495 0.0 1
(AU062159) Dictyostelium discoideum slug cDNA, clone SLH890. 1118 0.0 1
(BJ437671) Dictyostelium discoideum cDNA clone:ddv35b03, 3' ... 323 0.0 4
(BJ419086) Dictyostelium discoideum cDNA clone:ddv35b03, 5' ... 765 0.0 2
(AU039493) Dictyostelium discoideum slug cDNA, clone SLH890. 327 1e-84 1
(AC117176) Dictyostelium discoideum chromosome 2 map 5018074... 38 5e-05 22
(CP000361) Arcobacter butzleri RM4018, complete genome. 36 1e-04 20
(AE017263) Mesoplasma florum L1 complete genome. 36 2e-04 24
(CP000721) Clostridium beijerinckii NCIMB 8052, complete gen... 48 5e-04 21
(AC117072) Dictyostelium discoideum chromosome 2 map 3879572... 38 0.001 17
(AC114263) Dictyostelium discoideum chromosome 2 map 215673-... 38 0.003 15
(CU469464) Candidatus Phytoplasma mali strain AT complete ch... 32 0.005 22
(BX293980) Mycoplasma mycoides subsp. mycoides SC str. PG1, ... 36 0.006 23
(AE014851) Plasmodium falciparum 3D7 chromosome 12, section ... 34 0.020 18
(AC116960) Dictyostelium discoideum chromosome 2 map complem... 34 0.022 18
(AC200551) Zea mays chromosome 10 clone CH201-469G18; ZMMBBc... 54 0.026 1
(AC199151) Zea mays chromosome 10 clone ZMMBBb-106E6; ZMMBBb... 54 0.026 1
(CC803846) ih19h09.g1 WGS-ZmaysU (DH10b or JM107MA2) Zea may... 54 0.026 1
(CC801810) ih19h09.b1 WGS-ZmaysU (DH10b or JM107MA2) Zea may... 54 0.026 1
(AC116330) Dictyostelium discoideum chromosome 2 map 3191214... 34 0.027 13
(AE015927) Clostridium tetani E88, complete genome. 40 0.033 19
(AC117076) Dictyostelium discoideum chromosome 2 map 3323568... 34 0.056 14
(CP000942) Ureaplasma parvum serovar 3 str. ATCC 27815, comp... 34 0.060 23
(AL844509) Plasmodium falciparum chromosome 13. 34 0.062 19
(AC116986) Dictyostelium discoideum chromosome 2 map 2234041... 36 0.064 20
(AB240166) Brachyplatys subaeneus mitochondrial gene for 16S... 34 0.077 3
(EW986758) EST_sras_evg_779179 srasevg mixed_tissue Sebastes... 38 0.079 2
(EW986759) EST_sras_evg_779563 srasevg mixed_tissue Sebastes... 38 0.079 2
(CP001078) Clostridium botulinum E3 str. Alaska E43, complet... 38 0.085 20
(AL111168) Campylobacter jejuni subsp. jejuni NCTC 11168 com... 40 0.099 19
(AM431380) Vitis vinifera contig VV78X072951.3, whole genome... 36 0.13 6
(AC116963) Dictyostelium discoideum chromosome 2 map 4657875... 34 0.14 19
(AC117075) Dictyostelium discoideum chromosome 2 map 5201047... 44 0.15 18
(CP000742) Methanococcus vannielii SB, complete genome. 32 0.17 22
(AL929354) Plasmodium falciparum strain 3D7, chromosome 5, s... 32 0.18 21
(AJ938182) Staphylococcus aureus RF122 complete genome. 36 0.22 25
(CP000102) Methanosphaera stadtmanae DSM 3091, complete genome. 38 0.24 22
(EI884657) CAH1-50B11TR CAA1Ba Cicer arietinum genomic clone... 48 0.26 2
(AC116305) Dictyostelium discoideum chromosome 2 map 1005175... 38 0.27 23
(AL929357) Plasmodium falciparum strain 3D7, chromosome 9; s... 34 0.27 23
(CU468277) M.truncatula DNA sequence *** SEQUENCING CANCELLE... 38 0.31 12
(CR759734) Zebrafish DNA sequence from clone CH211-140L7 in ... 44 0.31 9
(CP000768) Campylobacter jejuni subsp. doylei 269.97, comple... 34 0.33 18
(AC115604) Dictyostelium discoideum chromosome 2 map 4354771... 34 0.34 11
(AE017308) Mycoplasma mobile 163K complete genome. 32 0.35 21
(CP000678) Methanobrevibacter smithii ATCC 35061, complete g... 38 0.35 24
(AC138960) Homo sapiens chromosome 5 clone RP11-881J15, WORK... 36 0.36 10
(AC119749) Homo sapiens chromosome 1 clone RP11-444C12, comp... 50 0.40 1
(AL354988) Human DNA sequence *** SEQUENCING CANCELLED *** f... 50 0.40 1
(EC745654) PSE00002797 rw_mgpallid Polysphondylium pallidum ... 50 0.40 1
(CU024887) M.truncatula DNA sequence from clone MTH2-174G4 o... 38 0.40 9
(AP009278) Solanum lycopersicum genomic DNA, chromosome 8, c... 38 0.41 9
(CP000825) Prochlorococcus marinus str. MIT 9215, complete g... 36 0.49 19
(AY894835) Phytophthora infestans haplotype Ia mitochondrion... 38 0.51 8
(U17009) Phytophthora infestans mitochondrion, complete genome. 38 0.52 8
(AF063866) Melanoplus sanguinipes entomopoxvirus, complete g... 36 0.52 17
(AC005140) Plasmodium falciparum chromosome 12 clone 3D7, **... 34 0.58 17
(AX392733) Sequence 23 from Patent WO0212526. 46 0.62 9
(AR707080) Sequence 23 from patent US 6933145. 46 0.62 9
(CP000025) Campylobacter jejuni RM1221, complete genome. 40 0.64 22
(AY898628) Phytophthora infestans haplotype IIb mitochondrio... 38 0.67 8
(AY898627) Phytophthora infestans haplotype IIa mitochondrio... 38 0.67 8
(BG637747) LD02464.3prime LD Drosophila melanogaster embryo ... 38 0.68 4
(DQ832718) Phytophthora ramorum mitochondrion, complete genome. 34 0.73 7
(EU427470) Phytophthora ramorum strain CBS 101553 mitochondr... 34 0.75 7
(CP000253) Staphylococcus aureus subsp. aureus NCTC 8325, co... 32 0.76 24
(AC116984) Dictyostelium discoideum chromosome 2 map 2567470... 38 0.77 21
(AL035476) Plasmodium falciparum MAL4P3. 38 0.81 2
(EX752260) RR1CA06JQ RR1(CS) Raphanus raphanistrum subsp. ma... 40 0.88 2
(AV423275) Lotus japonicus cDNA clone:MWM024b12_r, 5' end. 34 0.95 3
(CP000255) Staphylococcus aureus subsp. aureus USA300_FPR375... 32 0.98 24
(CP000730) Staphylococcus aureus subsp. aureus USA300_TCH151... 32 0.98 24
(AC142143) Medicago truncatula chromosome 8 clone mth2-25c22... 32 0.99 12
(BX571856) Staphylococcus aureus subsp. aureus strain MRSA25... 36 1.0 23
(CO193578) EC36425.5prime Exelixis FlyTag ML01 pSport-Tag21 ... 34 1.0 4
(AC202352) Medicago truncatula clone mth2-45d6, WORKING DRAF... 38 1.0 6
(AC115682) Dictyostelium discoideum chromosome 2 map 4101105... 32 1.1 10
(BX957225) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 34 1.1 10
(EF533698) Glycine max clone BAC GM_WBb042I24, complete sequ... 38 1.1 10
(DY888163) CeleSEQ3633 Cunninghamella elegans pBluescript (E... 40 1.2 3
(AY160099) Dictyostelium discoideum nucleotide exchange fact... 40 1.2 4
(AF356600) Dictyostelium discoideum filament-interacting pro... 30 1.3 6
(AC004688) Plasmodium falciparum chromosome 12 clone 3D7, **... 36 1.3 15
(AC115598) Dictyostelium discoideum chromosome 2 map 581427-... 30 1.3 15
(AC115612) Dictyostelium discoideum chromosome 2 map 6245135... 34 1.3 11
(CP000814) Campylobacter jejuni subsp. jejuni 81116, complet... 34 1.3 21
(BW628784) Lotus japonicus cDNA, clone: LjFL2-021-BH02, 5' e... 34 1.4 3
(AC116956) Dictyostelium discoideum chromosome 2 map 1418423... 36 1.4 19
(CP000939) Clostridium botulinum B1 str. Okra, complete genome. 38 1.4 22
(AF290177) Candida albicans imidazole glycerol phosphate syn... 36 1.5 5
(CS602955) Sequence 1941 from Patent WO2007039234. 32 1.5 5
(CP000046) Staphylococcus aureus subsp. aureus COL, complete... 32 1.5 23
(CT025908) Zebrafish DNA sequence from clone CH211-163B1 in ... 48 1.6 1
(CR376782) Zebrafish DNA sequence from clone CH211-235O4 in ... 48 1.6 1
(BX548157) Zebrafish DNA sequence from clone CH211-201B11 in... 48 1.6 1
(BX323543) Zebrafish DNA sequence from clone DKEYP-67E1 in l... 48 1.6 1
(EF010980) Silencing vector p3UTR12850S, complete sequence. 48 1.6 1
(DQ995486) Overexpression vector pFC12850OE, complete sequence. 48 1.6 1
(AC142349) Pan troglodytes BAC clone RP43-9F6 from chromosom... 48 1.6 1
(EU124734) Solanum lycopersicum chromosome 3 clone C03HBa003... 48 1.6 1

>(AY254473) Dictyostelium discoideum nucleotide exchange factor RasGEF
Q (gefQ) gene, complete cds.
Length = 6610

Score = 1495 bits (754), Expect = 0.0
Identities = 754/754 (100%)
Strand = Plus / Plus


Query: 121 ttaaataatggtaaaaatttaattggattagtttataatgataaagatgaagttattgca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2080 ttaaataatggtaaaaatttaattggattagtttataatgataaagatgaagttattgca 2139


Query: 181 ggtgaaagagataaaattattggattatttacagatatttcaaaagtgacaggtacacaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2140 ggtgaaagagataaaattattggattatttacagatatttcaaaagtgacaggtacacaa 2199


Query: 241 tttttagaggaatttttatttacatatcattattatatgacatcagttgatttattagag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2200 tttttagaggaatttttatttacatatcattattatatgacatcagttgatttattagag 2259


Query: 301 aatttaaagggtagatttaataatccattaatggatcaagcagcacaatcaatatcaata 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2260 aatttaaagggtagatttaataatccattaatggatcaagcagcacaatcaatatcaata 2319


Query: 361 cttgaagagaatcatgacaaagtaaagattgagcagctttcaacacatattagacttcgt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2320 cttgaagagaatcatgacaaagtaaagattgagcagctttcaacacatattagacttcgt 2379


Query: 421 gttattaatgtaataaagaaatggattgaaaatcatggttatgcattcgcaaccgatatt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2380 gttattaatgtaataaagaaatggattgaaaatcatggttatgcattcgcaaccgatatt 2439


Query: 481 aacctgtatcaaatgttggtggactttatagatggtgatgtgatgtcgttcagtcaaaga 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2440 aacctgtatcaaatgttggtggactttatagatggtgatgtgatgtcgttcagtcaaaga 2499


Query: 541 tggggccaatatttgaaaaaggcaatcaatgatagtggctgtctattacgatatatagct 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2500 tggggccaatatttgaaaaaggcaatcaatgatagtggctgtctattacgatatatagct 2559


Query: 601 gtcaatgtaaaagaagcatcctccaaacaattgcgtgaaatcatctcattggataattta 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2560 gtcaatgtaaaagaagcatcctccaaacaattgcgtgaaatcatctcattggataattta 2619


Query: 661 gatgcaatctcaaaattaatgtcacaatcattacaattgaaagaacgtaaaaaaggttta 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2620 gatgcaatctcaaaattaatgtcacaatcattacaattgaaagaacgtaaaaaaggttta 2679


Query: 721 aaagttattaaaaattcattcacaggtaatgaagctgtagaatggttaattaataaattc 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2680 aaagttattaaaaattcattcacaggtaatgaagctgtagaatggttaattaataaattc 2739


Query: 781 aatttagattcaaaagatgaagcacttgaaactttatcaaaaatgttacaatcaaattta 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2740 aatttagattcaaaagatgaagcacttgaaactttatcaaaaatgttacaatcaaattta 2799


Query: 841 atttttcatcattcaaaatctggttcttcatttt 874
||||||||||||||||||||||||||||||||||
Sbjct: 2800 atttttcatcattcaaaatctggttcttcatttt 2833

Score = 1092 bits (551), Expect(2) = 0.0
Identities = 551/551 (100%)
Strand = Plus / Plus


Query: 1361 catcaccaaattcaacattttcaattacatttttagatattcatccagttgaaatcgcta 1420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3320 catcaccaaattcaacattttcaattacatttttagatattcatccagttgaaatcgcta 3379


Query: 1421 gacaattgacattaattgattatgagttatttaaaaaattatcaccaactgatttctatc 1480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3380 gacaattgacattaattgattatgagttatttaaaaaattatcaccaactgatttctatc 3439


Query: 1481 atacagcatggagtaaaccagatgcaaaagagaaagtaccaaatttaatcaattttatca 1540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3440 atacagcatggagtaaaccagatgcaaaagagaaagtaccaaatttaatcaattttatca 3499


Query: 1541 atagatccaataccgttagttattgggttgccacagagattttatcatcttcaaatataa 1600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3500 atagatccaataccgttagttattgggttgccacagagattttatcatcttcaaatataa 3559


Query: 1601 aacatcgtgtttcagttttaaaaagattcatcactatcgctgaaatccttagaaaatttc 1660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3560 aacatcgtgtttcagttttaaaaagattcatcactatcgctgaaatccttagaaaatttc 3619


Query: 1661 ataattggaatactctcactggtattttaatgggtttaaatttaggttcaattcaacgtt 1720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3620 ataattggaatactctcactggtattttaatgggtttaaatttaggttcaattcaacgtt 3679


Query: 1721 taaagaaaacttgggaatctattgataagaaacaattggattcacttcaaaatttaatta 1780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3680 taaagaaaacttgggaatctattgataagaaacaattggattcacttcaaaatttaatta 3739


Query: 1781 atctaacaagtgaacgtttaaattattcaaattatcgtaaagaaatgtcaactccaactt 1840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3740 atctaacaagtgaacgtttaaattattcaaattatcgtaaagaaatgtcaactccaactt 3799


Query: 1841 atccttgtttaccttttatggctgtatatttaaaagatttatattttattgaagaaaatc 1900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3800 atccttgtttaccttttatggctgtatatttaaaagatttatattttattgaagaaaatc 3859


Query: 1901 ctgattattta 1911
|||||||||||
Sbjct: 3860 ctgattattta 3870

Score = 595 bits (300), Expect(2) = 0.0
Identities = 300/300 (100%)
Strand = Plus / Plus


Query: 1054 aatggaaatggtacaacagctataacgagtacaagtttaccaaattctatatcatcatca 1113
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3013 aatggaaatggtacaacagctataacgagtacaagtttaccaaattctatatcatcatca 3072


Query: 1114 aattcaacatcaattttaacatcattagttgtaaatagtaatagtagtggaattgctaat 1173
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3073 aattcaacatcaattttaacatcattagttgtaaatagtaatagtagtggaattgctaat 3132


Query: 1174 ggttcctcaactccatcaataccatcatctgtaacatcacctttaacaaattcaaaatcg 1233
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3133 ggttcctcaactccatcaataccatcatctgtaacatcacctttaacaaattcaaaatcg 3192


Query: 1234 actttaaattctaccccttcatcatcatcaaattcttttacttttaaagataaatcaaca 1293
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3193 actttaaattctaccccttcatcatcatcaaattcttttacttttaaagataaatcaaca 3252


Query: 1294 agtatctattattttatatttgaaaatattaattttccagaaccaattgtaccaaaaaca 1353
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3253 agtatctattattttatatttgaaaatattaattttccagaaccaattgtaccaaaaaca 3312

Score = 327 bits (165), Expect(6) = 0.0
Identities = 165/165 (100%)
Strand = Plus / Plus


Query: 2246 cttcaccatctccatcaccctcctcctctccaattacttcatcaccaatatcatcattaa 2305
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4317 cttcaccatctccatcaccctcctcctctccaattacttcatcaccaatatcatcattaa 4376


Query: 2306 caattaacaacaacaatacgatttcatcaaatttatcagcttcaactgatagtagtataa 2365
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4377 caattaacaacaacaatacgatttcatcaaatttatcagcttcaactgatagtagtataa 4436


Query: 2366 atacaaaaaagaaatcttctttcttaatgtttggaaagaaataat 2410
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4437 atacaaaaaagaaatcttctttcttaatgtttggaaagaaataat 4481

Score = 323 bits (163), Expect(6) = 0.0
Identities = 163/163 (100%)
Strand = Plus / Plus


Query: 1976 gatatcaaactgaacaatattggttaaagaaaatagatgcaattgaaaatatattgaaat 2035
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4047 gatatcaaactgaacaatattggttaaagaaaatagatgcaattgaaaatatattgaaat 4106


Query: 2036 cagttgttttaactgataaagatttatataaagcttcacatatgattgaacaacctcaaa 2095
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4107 cagttgttttaactgataaagatttatataaagcttcacatatgattgaacaacctcaaa 4166


Query: 2096 gaacaatgactgttggttcaaatttaaaagctcaatcattttt 2138
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4167 gaacaatgactgttggttcaaatttaaaagctcaatcattttt 4209

Score = 153 bits (77), Expect(6) = 0.0
Identities = 77/77 (100%)
Strand = Plus / Plus


Query: 933 gagttcgaatacaacaactgcaaatatggcatcatcatcttctgcaaccgataatagcag 992
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2892 gagttcgaatacaacaactgcaaatatggcatcatcatcttctgcaaccgataatagcag 2951


Query: 993 cagtggtggtgttgtaa 1009
|||||||||||||||||
Sbjct: 2952 cagtggtggtgttgtaa 2968

Score = 28.2 bits (14), Expect(6) = 0.0
Identities = 14/14 (100%)
Strand = Plus / Plus


Query: 1250 cttcatcatcatca 1263
||||||||||||||
Sbjct: 2984 cttcatcatcatca 2997

Score = 28.2 bits (14), Expect(6) = 0.0
Identities = 17/18 (94%)
Strand = Plus / Plus


Query: 1361 catcaccaaattcaacat 1378
||||| ||||||||||||
Sbjct: 3065 catcatcaaattcaacat 3082

Score = 26.3 bits (13), Expect(6) = 0.0
Identities = 13/13 (100%)
Strand = Plus / Plus


Query: 20 caaaaactgatga 32
|||||||||||||
Sbjct: 1979 caaaaactgatga 1991

Lambda K H
1.37 0.711 1.31

Matrix: blastn matrix:1 -3
Number of Sequences: 92845959
Number of Hits to DB: 2,840,634,586
Number of extensions: 189144887
Number of successful extensions: 16199423
Number of sequences better than 10.0: 282
Length of query: 2424
Length of database: 95,242,211,685
Length adjustment: 25
Effective length of query: 2399
Effective length of database: 97,216,030,006
Effective search space: 233221255984394
Effective search space used: 233221255984394
X1: 11 (21.8 bits)
S2: 23 (46.1 bits)

protein update 2009. 7.12
Homology vs Protein
Query= Contig-U14691-1 (Contig-U14691-1Q) /CSM_Contig/Contig-U14691-1Q.Seq.d
(2424 letters)

Database: nrp_B
3,236,559 sequences; 1,051,180,864 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value

AY254473_1(AY254473|pid:none) Dictyostelium discoideum nucleotid... 565 e-159
AC116986_28(AC116986|pid:none) Dictyostelium discoideum chromoso... 183 2e-44
AY160105_1(AY160105|pid:none) Dictyostelium discoideum nucleotid... 182 4e-44
AC117082_5(AC117082|pid:none) Dictyostelium discoideum chromosom... 180 2e-43
AY160100_1(AY160100|pid:none) Dictyostelium discoideum nucleotid... 172 4e-41
AF474377_1(AF474377|pid:none) Dictyostelium discoideum Ras GTP e... 172 4e-41
AY160099_1(AY160099|pid:none) Dictyostelium discoideum nucleotid... 171 1e-40
AY160098_1(AY160098|pid:none) Dictyostelium discoideum nucleotid... 162 4e-38
U53884_1(U53884|pid:none) Dictyostelium discoideum aimless RasGE... 160 3e-37
AY160090_1(AY160090|pid:none) Dictyostelium discoideum nucleotid... 160 3e-37
AX027844_1(AX027844|pid:none) Sequence 1 from Patent WO0040718. 157 1e-36
AF094691_1(AF094691|pid:none) Mus musculus guanine nucleotide re... 157 2e-36
AK135070_1(AK135070|pid:none) Mus musculus adult male olfactory ... 157 2e-36
X59868_1(X59868|pid:none) M.musculus CDC25Mm mRNA for guanine nu... 157 2e-36
AM920436_178(AM920436|pid:none) Penicillium chrysogenum Wisconsi... 156 3e-36
A75965_1(A75965|pid:none) Sequence 1 from Patent WO9321314. 156 4e-36
AB385192_1(AB385192|pid:none) Synthetic construct DNA, clone: pF... 156 4e-36
BC091317_1(BC091317|pid:none) Rattus norvegicus RAS protein-spec... 155 7e-36
AC116987_20(AC116987|pid:none) Dictyostelium discoideum chromoso... 154 1e-35
CU633900_651(CU633900|pid:none) Podospora anserina genomic DNA c... 152 7e-35
AP007162_207(AP007162|pid:none) Aspergillus oryzae RIB40 genomic... 150 2e-34
AC115592_17(AC115592|pid:none) Dictyostelium discoideum chromoso... 150 2e-34
(P70392) RecName: Full=Ras-specific guanine nucleotide-releasing... 142 7e-32
AF023130_1(AF023130|pid:none) Homo sapiens Ras-GRF2 mRNA, partia... 142 7e-32
CQ834804_1(CQ834804|pid:none) Sequence 675 from Patent WO2004058... 142 7e-32
(O14827) RecName: Full=Ras-specific guanine nucleotide-releasing... 142 7e-32
(A2CEA7) RecName: Full=Ras-specific guanine nucleotide-releasing... 141 1e-31
(Q99JE4) RecName: Full=Ras-specific guanine nucleotide-releasing... 141 1e-31
CR858031_1(CR858031|pid:none) Pongo abelii mRNA; cDNA DKFZp459J1... 141 1e-31
AF109312_1(AF109312|pid:none) Mus musculus guanine nucleotide re... 140 2e-31
BT015294_1(BT015294|pid:none) Drosophila melanogaster GH01796 fu... 139 5e-31
(P26675) RecName: Full=Protein son of sevenless; &A41216(A41216... 139 5e-31
M83931_1(M83931|pid:none) Drosophila melanogaster son of sevenle... 139 5e-31
CP000502_107(CP000502|pid:none) Pichia stipitis CBS 6054 chromos... 137 1e-30
AY160093_1(AY160093|pid:none) Dictyostelium discoideum nucleotid... 137 2e-30
A75971_1(A75971|pid:none) Sequence 7 from Patent WO9321314. 137 2e-30
L20686_1(L20686|pid:none) Homo sapiens guanine nucleotide releas... 137 2e-30
AC115682_8(AC115682|pid:none) Dictyostelium discoideum chromosom... 136 3e-30
BC143367_1(BC143367|pid:none) Homo sapiens son of sevenless homo... 135 5e-30
AB209277_1(AB209277|pid:none) Homo sapiens mRNA for son of seven... 135 5e-30
AY160092_1(AY160092|pid:none) Dictyostelium discoideum nucleotid... 135 5e-30
A75969_1(A75969|pid:none) Sequence 5 from Patent WO9321314. 135 9e-30
S25714(S25714) son-of-sevenless-2 protein - mouse (fragment) &Z... 133 3e-29
(Q02384) RecName: Full=Son of sevenless homolog 2; Shor... 133 3e-29
AY160104_1(AY160104|pid:none) Dictyostelium discoideum nucleotid... 133 3e-29
FM992690_366(FM992690|pid:none) Candida dubliniensis CD36 chromo... 132 5e-29
CR382130_894(CR382130|pid:none) Yarrowia lipolytica strain CLIB1... 132 6e-29
(P43069) RecName: Full=Cell division control protein 25; &GN103... 132 6e-29
AF441482_1(AF441482|pid:none) Homo sapiens alternate SOS1 (SOS1)... 132 8e-29
AC019171_1(AC019171|pid:none) Homo sapiens BAC clone RP11-173C1 ... 132 8e-29
(Q07889) RecName: Full=Son of sevenless homolog 1; Shor... 132 8e-29
AB209140_1(AB209140|pid:none) Homo sapiens mRNA for son of seven... 132 8e-29
A37488(A37488)Ras guanine nucleotide exchange factor son-of-seve... 131 1e-28
BC131870_1(BC131870|pid:none) Danio rerio zgc:158274, mRNA (cDNA... 131 1e-28
S14177(S14177;S12942;PS0040)SCD25 protein (version 1) - yeast (S... 131 1e-28
GN110865_1(GN110865|pid:none) Sequence 15646 from Patent WO20090... 131 1e-28
(P14771) RecName: Full=Guanine nucleotide exchange factor SDC25; 131 1e-28
AY902349_1(AY902349|pid:none) Mus musculus strain CAST/EiJ son o... 131 1e-28
M26647_1(M26647|pid:none) Saccharomyces cerevisiae SDC25 gene, c... 131 1e-28
(Q62245) RecName: Full=Son of sevenless homolog 1; Shor... 131 1e-28
S25716(S25716;S21391) Ras guanine nucleotide exchange factor son... 131 1e-28
GN103733_1(GN103733|pid:none) Sequence 8514 from Patent WO200903... 131 1e-28
AK140310_1(AK140310|pid:none) Mus musculus adult male adrenal gl... 131 1e-28
(P04821) RecName: Full=Cell division control protein 25; &GN103... 131 1e-28
AF094679_1(AF094679|pid:none) Mus musculus Sos1 gene, exon and p... 131 1e-28
AL031966_1(AL031966|pid:none) S.pombe chromosome III cosmid c1442. 130 3e-28
AF275723_1(AF275723|pid:none) Dictyostelium discoideum Ras guani... 129 4e-28
AK143331_1(AK143331|pid:none) Mus musculus 2 days pregnant adult... 127 1e-27
BC025553_1(BC025553|pid:none) Mus musculus Rap guanine nucleotid... 127 1e-27
AL607091_5(AL607091|pid:none) Mouse DNA sequence from clone RP23... 127 1e-27
AL607091_4(AL607091|pid:none) Mouse DNA sequence from clone RP23... 127 1e-27
AL596127_16(AL596127|pid:none) Mouse DNA sequence from clone RP2... 127 1e-27
(P83900) RecName: Full=Rap guanine nucleotide exchange factor 5;... 127 2e-27
AF478567_1(AF478567|pid:none) Homo sapiens PDZ domain-containing... 126 3e-27
AK302640_1(AK302640|pid:none) Homo sapiens cDNA FLJ53249 complet... 126 3e-27
BC144627_1(BC144627|pid:none) Homo sapiens Rap guanine nucleotid... 126 3e-27
AF394782_1(AF394782|pid:none) Homo sapiens rap guanine nucleotid... 126 3e-27
AK122234_1(AK122234|pid:none) Mus musculus mRNA for mKIAA0277 pr... 125 6e-27
AK030016_1(AK030016|pid:none) Mus musculus adult male testis cDN... 125 6e-27
AK083591_1(AK083591|pid:none) Mus musculus 9 days embryo whole b... 125 6e-27
D87467_1(D87467|pid:none) Homo sapiens mRNA for KIAA0277 gene, p... 125 7e-27
AE013599_2480(AE013599|pid:none) Drosophila melanogaster chromos... 125 9e-27
AM920437_1749(AM920437|pid:none) Penicillium chrysogenum Wiscons... 124 1e-26
BC125684_1(BC125684|pid:none) Xenopus tropicalis Rap guanine nuc... 124 1e-26
BC124563_1(BC124563|pid:none) Xenopus tropicalis hypothetical pr... 124 2e-26
AE017353_159(AE017353|pid:none) Cryptococcus neoformans var. neo... 124 2e-26
AC074344_1(AC074344|pid:none) Homo sapiens BAC clone RP11-138A23... 123 4e-26
AK294459_1(AK294459|pid:none) Homo sapiens cDNA FLJ61094 partial... 123 4e-26
AK029995_1(AK029995|pid:none) Mus musculus adult male testis cDN... 123 4e-26
AB002311_1(AB002311|pid:none) Homo sapiens mRNA for KIAA0313 gen... 123 4e-26
FN357308_23(FN357308|pid:none) Schistosoma mansoni genome sequen... 122 6e-26
(Q9USU1) RecName: Full=Ras guanine nucleotide exchange factor ef... 120 2e-25
CU928180_398(CU928180|pid:none) Kluyveromyces thermotolerans str... 119 4e-25
AE016817_362(AE016817|pid:none) Ashbya gossypii (= Eremothecium ... 119 4e-25
AY149915_1(AY149915|pid:none) Ustilago maydis guanyl nucleotide ... 119 5e-25
AF251308_1(AF251308|pid:none) Caenorhabditis elegans guanine nuc... 118 9e-25
BC166138_1(BC166138|pid:none) Xenopus tropicalis Rap guanine nuc... 118 9e-25
AC006692_9(AC006692|pid:none) Caenorhabditis elegans cosmid T28F... 118 9e-25
AB385202_1(AB385202|pid:none) Synthetic construct DNA, clone: pF... 118 1e-24
AL160169_2(AL160169|pid:none) Human DNA sequence from clone RP11... 118 1e-24
AL160169_5(AL160169|pid:none) Human DNA sequence from clone RP11... 118 1e-24
BC041710_1(BC041710|pid:none) Homo sapiens Rap guanine nucleotid... 118 1e-24
AL160276_3(AL160276|pid:none) Human DNA sequence from clone RP11... 118 1e-24
(Q9NZ16) RecName: Full=Ras-specific guanine nucleotide-releasing... 118 1e-24
BC072656_1(BC072656|pid:none) Mus musculus Ral GEF with PH domai... 117 2e-24
AK147696_1(AK147696|pid:none) Mus musculus cDNA, RIKEN full-leng... 117 2e-24
JC7736(JC7736)C3G protein, long type - mouse 117 2e-24
BC129881_1(BC129881|pid:none) Mus musculus Rap guanine nucleotid... 117 2e-24
AK077034_1(AK077034|pid:none) Mus musculus adult male testis cDN... 117 2e-24
AK147468_1(AK147468|pid:none) Mus musculus adult male brain UNDE... 117 2e-24
BC032372_1(BC032372|pid:none) Homo sapiens Ral GEF with PH domai... 117 2e-24
EU362913_1(EU362913|pid:none) Drosophila melanogaster dizzy isof... 117 2e-24
AE014134_1119(AE014134|pid:none) Drosophila melanogaster chromos... 117 2e-24
AL845277_5(AL845277|pid:none) Mouse DNA sequence from clone RP23... 117 2e-24
EU362915_1(EU362915|pid:none) Drosophila melanogaster dizzy isof... 117 2e-24
AF312924_1(AF312924|pid:none) Mus musculus Ral-A exchange factor... 117 3e-24
(Q4R7W3) RecName: Full=Ras-specific guanine nucleotide-releasing... 117 3e-24
AK018622_1(AK018622|pid:none) Mus musculus adult male cecum cDNA... 117 3e-24
AK033549_1(AK033549|pid:none) Mus musculus adult male colon cDNA... 117 3e-24
AK299149_1(AK299149|pid:none) Homo sapiens cDNA FLJ61342 complet... 117 3e-24
AK029049_1(AK029049|pid:none) Mus musculus 10 days neonate skin ... 117 3e-24
(Q86X27) RecName: Full=Ras-specific guanine nucleotide-releasing... 117 3e-24
AK169368_1(AK169368|pid:none) Mus musculus 17 days pregnant adul... 117 3e-24
(Q9ERD6) RecName: Full=Ras-specific guanine nucleotide-releasing... 117 3e-24
BX004769_1(BX004769|pid:none) Zebrafish DNA sequence from clone ... 116 4e-24
AE014298_984(AE014298|pid:none) Drosophila melanogaster chromoso... 115 7e-24
AE014298_987(AE014298|pid:none) Drosophila melanogaster chromoso... 115 7e-24
AP007157_830(AP007157|pid:none) Aspergillus oryzae RIB40 genomic... 115 7e-24
AE014298_985(AE014298|pid:none) Drosophila melanogaster chromoso... 115 7e-24
AE014298_983(AE014298|pid:none) Drosophila melanogaster chromoso... 115 7e-24
BC118719_1(BC118719|pid:none) Xenopus tropicalis hypothetical pr... 115 7e-24
AF053358_1(AF053358|pid:none) Drosophila melanogaster guanine nu... 115 7e-24
(O77086) RecName: Full=Guanine nucleotide-releasing factor 2; Al... 115 7e-24
BT025818_1(BT025818|pid:none) Drosophila melanogaster IP03271 fu... 115 7e-24
AF170796_1(AF170796|pid:none) Caenorhabditis elegans RA-GEF (ra-... 115 1e-23
AF308449_1(AF308449|pid:none) Caenorhabditis elegans PXF isoform... 115 1e-23
AK001106_1(AK001106|pid:none) Homo sapiens cDNA FLJ10244 fis, cl... 114 1e-23
AK296340_1(AK296340|pid:none) Homo sapiens cDNA FLJ58368 complet... 114 1e-23
BC040183_1(BC040183|pid:none) Homo sapiens Rap guanine nucleotid... 114 1e-23
(Q5ZJK0) RecName: Full=Ras-specific guanine nucleotide-releasing... 114 1e-23
AK304278_1(AK304278|pid:none) Homo sapiens cDNA FLJ51189 complet... 114 1e-23
BC024004_1(BC024004|pid:none) Homo sapiens Rap guanine nucleotid... 114 1e-23
AK316014_1(AK316014|pid:none) Homo sapiens cDNA, FLJ78913 comple... 114 1e-23
AB075513_1(AB075513|pid:none) Homo sapiens neuroblastoma cDNA, c... 114 1e-23
(Q8WZA2) RecName: Full=Rap guanine nucleotide exchange factor 4;... 114 1e-23
CS416351_1(CS416351|pid:none) Sequence 3 from Patent WO200609470... 114 2e-23
(B0UXH6) RecName: Full=Ras-specific guanine nucleotide-releasing... 114 2e-23
AY582133_1(AY582133|pid:none) Xenopus laevis Rap1 guanine-nucleo... 114 2e-23
BC146736_1(BC146736|pid:none) Danio rerio Ral GEF with PH domain... 114 2e-23
AC117080_21(AC117080|pid:none) Dictyostelium discoideum chromoso... 113 4e-23
AM270066_3(AM270066|pid:none) Aspergillus niger contig An04c0050... 113 4e-23
AY160103_1(AY160103|pid:none) Dictyostelium discoideum nucleotid... 113 4e-23
AK220281_1(AK220281|pid:none) Mus musculus mRNA for mKIAA4040 pr... 112 6e-23
(Q9EQZ6) RecName: Full=Rap guanine nucleotide exchange factor 4;... 112 6e-23
AB445011_1(AB445011|pid:none) Mus musculus cAMP-GEFII mRNA for c... 112 6e-23
AB037668_1(AB037668|pid:none) Mus musculus Epac2 mRNA for cAMP-G... 112 6e-23
AK173041_1(AK173041|pid:none) Mus musculus mRNA for mKIAA0846 pr... 112 6e-23
AB154824_1(AB154824|pid:none) Mus musculus mRNA for RasGRP3, com... 112 8e-23
BC119832_1(BC119832|pid:none) Bos taurus RAS guanyl releasing pr... 112 8e-23
(Q5R9B2) RecName: Full=Rap guanine nucleotide exchange factor-li... 112 8e-23
AK304160_1(AK304160|pid:none) Homo sapiens cDNA FLJ56384 complet... 111 1e-22
AJ720845_1(AJ720845|pid:none) Gallus gallus mRNA for hypothetica... 111 1e-22
AK036803_1(AK036803|pid:none) Mus musculus adult female vagina c... 111 1e-22
AB384012_1(AB384012|pid:none) Synthetic construct DNA, clone: pF... 110 2e-22
(Q8IV61) RecName: Full=Ras guanyl-releasing protein 3; AltName: ... 110 2e-22
AL590963_1(AL590963|pid:none) Mouse DNA sequence from clone RP23... 110 2e-22
BC080279_1(BC080279|pid:none) Mus musculus Rap guanine nucleotid... 110 2e-22
(Q9UHV5) RecName: Full=Rap guanine nucleotide exchange factor-li... 110 2e-22
AF117946_1(AF117946|pid:none) Homo sapiens Link guanine nucleoti... 110 2e-22
AK294642_1(AK294642|pid:none) Homo sapiens cDNA FLJ58529 complet... 110 2e-22
CR382124_382(CR382124|pid:none) Kluyveromyces lactis strain NRRL... 110 2e-22
AK292983_1(AK292983|pid:none) Homo sapiens cDNA FLJ77595 complet... 110 2e-22
(Q9Z1C7) RecName: Full=Rap guanine nucleotide exchange factor 4;... 109 4e-22
BC055185_1(BC055185|pid:none) Danio rerio Ral-A exchange factor ... 109 5e-22
AL929533_2(AL929533|pid:none) Zebrafish DNA sequence from clone ... 108 9e-22
AE013599_215(AE013599|pid:none) Drosophila melanogaster chromoso... 108 1e-21
(A4IFE4) RecName: Full=Ras-GEF domain-containing family member 1... 108 1e-21
AE013599_216(AE013599|pid:none) Drosophila melanogaster chromoso... 108 1e-21
BC055678_1(BC055678|pid:none) Danio rerio RasGEF domain family, ... 108 1e-21
(Q8JZL7) RecName: Full=Ras-GEF domain-containing family member 1... 107 2e-21
AL669999_10(AL669999|pid:none) Neurospora crassa DNA linkage gro... 107 2e-21
AX460077_1(AX460077|pid:none) Sequence 1 from Patent WO0218577. 107 2e-21
FN357914_21(FN357914|pid:none) Schistosoma mansoni genome sequen... 107 2e-21
(Q0VAM2) RecName: Full=Ras-GEF domain-containing family member 1... 107 3e-21
BC121004_1(BC121004|pid:none) Homo sapiens RasGEF domain family,... 107 3e-21
BC161641_1(BC161641|pid:none) Xenopus tropicalis hypothetical pr... 107 3e-21
AK295616_1(AK295616|pid:none) Homo sapiens cDNA FLJ61275 complet... 107 3e-21
AK303625_1(AK303625|pid:none) Homo sapiens cDNA FLJ50337 complet... 107 3e-21
(Q5RC04) RecName: Full=Ras-GEF domain-containing family member 1B; 107 3e-21
CR858478_1(CR858478|pid:none) Pongo abelii mRNA; cDNA DKFZp469N2... 107 3e-21
BC121003_1(BC121003|pid:none) Homo sapiens RasGEF domain family,... 107 3e-21
AL645913_2(AL645913|pid:none) Mouse DNA sequence from clone RP23... 106 3e-21
(Q9D300) RecName: Full=Ras-GEF domain-containing family member 1... 106 3e-21
(Q55EC7) RecName: Full=RasGEF domain-containing serine/threonine... 106 3e-21
AK093160_1(AK093160|pid:none) Homo sapiens cDNA FLJ35841 fis, cl... 106 5e-21
(Q28EC1) RecName: Full=Ras-GEF domain-containing family member 1... 106 5e-21
BC036802_1(BC036802|pid:none) Homo sapiens RasGEF domain family,... 106 5e-21
(Q8N431) RecName: Full=Ras-GEF domain-containing family member 1... 106 5e-21
AE017356_184(AE017356|pid:none) Cryptococcus neoformans var. neo... 106 5e-21
(Q95KH6) RecName: Full=Ras-GEF domain-containing family member 1... 105 6e-21
(Q6DBW1) RecName: Full=Ras-GEF domain-containing family member 1... 105 8e-21
AF321469_1(AF321469|pid:none) Yarrowia lipolytica Ras guanine-nu... 104 1e-20
AL845277_2(AL845277|pid:none) Mouse DNA sequence from clone RP23... 103 2e-20
CR380950_274(CR380950|pid:none) Candida glabrata strain CBS138 c... 103 4e-20
AE014296_3925(AE014296|pid:none) Drosophila melanogaster chromos... 102 7e-20
AK141524_1(AK141524|pid:none) Mus musculus adult male hippocampu... 101 1e-19
AF060819_1(AF060819|pid:none) Rattus norvegicus ras guanyl relea... 101 1e-19
(Q9R1K8) RecName: Full=RAS guanyl-releasing protein 1; AltName: ... 101 1e-19
AK034265_1(AK034265|pid:none) Mus musculus adult male diencephal... 101 1e-19
BC020311_1(BC020311|pid:none) Mus musculus Rap guanine nucleotid... 101 1e-19
AK142594_1(AK142594|pid:none) Mus musculus 10 days lactation, ad... 101 1e-19
CS416355_1(CS416355|pid:none) Sequence 7 from Patent WO2006094703. 100 3e-19
BC017728_1(BC017728|pid:none) Homo sapiens Rap guanine nucleotid... 100 3e-19
AK125545_1(AK125545|pid:none) Homo sapiens cDNA FLJ43557 fis, cl... 100 3e-19
EF636666_1(EF636666|pid:none) Canis lupus familiaris exchange pr... 100 3e-19
(O95398) RecName: Full=Rap guanine nucleotide exchange factor 3;... 100 3e-19
BC092404_1(BC092404|pid:none) Homo sapiens Rap guanine nucleotid... 100 3e-19
AK314091_1(AK314091|pid:none) Homo sapiens cDNA, FLJ94771, highl... 100 4e-19
(Q9UI94) RecName: Full=RAS guanyl-releasing protein 1; AltName: ... 100 4e-19
AF081193_1(AF081193|pid:none) Mus musculus calcium and DAG-regul... 100 4e-19
AY858556_1(AY858556|pid:none) Homo sapiens RAS guanyl releasing ... 100 4e-19
AY954625_1(AY954625|pid:none) Homo sapiens Ras guanyl releasing ... 100 4e-19
(P0C643) RecName: Full=RAS guanyl-releasing protein 2; AltName: ... 100 4e-19
AL845277_3(AL845277|pid:none) Mouse DNA sequence from clone RP23... 99 6e-19
(Q32N25) RecName: Full=RAS guanyl-releasing protein 2-A; &BC108... 99 6e-19
T21321(T21321)hypothetical protein F25B3.3 - Caenorhabditis eleg... 99 6e-19
AK129123_1(AK129123|pid:none) Mus musculus mRNA for mKIAA0351 pr... 99 6e-19
(Q6NTL4) RecName: Full=RAS guanyl-releasing protein 1; &BC06894... 99 7e-19
(A4IJ06) RecName: Full=RAS guanyl-releasing protein 1; &BC13622... 99 7e-19
(Q9QUG9) RecName: Full=RAS guanyl-releasing protein 2; AltName: ... 99 9e-19
BT010019_1(BT010019|pid:none) Drosophila melanogaster RE10624 fu... 99 9e-19
BC110306_1(BC110306|pid:none) Homo sapiens RAS guanyl releasing ... 98 2e-18
AK092882_1(AK092882|pid:none) Homo sapiens cDNA FLJ35563 fis, cl... 98 2e-18
AF043722_1(AF043722|pid:none) Homo sapiens guanine exchange fact... 98 2e-18
BT020843_1(BT020843|pid:none) Bos taurus RasGEF domain family, m... 97 2e-18
(A6N9I4) RecName: Full=RAS guanyl-releasing protein 2; AltName: ... 97 2e-18
(Q8R5I4) RecName: Full=RAS guanyl-releasing protein 4; &AF46526... 97 3e-18
AF081197_1(AF081197|pid:none) Homo sapiens calcium and DAG-regul... 97 3e-18
AY160095_1(AY160095|pid:none) Dictyostelium discoideum nucleotid... 97 3e-18
Z70752_2(Z70752|pid:none) Caenorhabditis elegans Cosmid F25B3, c... 97 3e-18
AF465264_1(AF465264|pid:none) Rattus norvegicus ras guanine nucl... 97 3e-18
AF081195_1(AF081195|pid:none) Homo sapiens calcium and DAG-regul... 97 3e-18
AM269957_6(AM269957|pid:none) Aspergillus niger contig An01c0100... 97 3e-18
AC024755_6(AC024755|pid:none) Caenorhabditis elegans cosmid Y34B... 97 3e-18
CR382131_1446(CR382131|pid:none) Yarrowia lipolytica strain CLIB... 96 6e-18
AK158756_1(AK158756|pid:none) Mus musculus visual cortex cDNA, R... 96 8e-18
BC138284_1(BC138284|pid:none) Mus musculus RasGEF domain family,... 96 8e-18
BC145232_1(BC145232|pid:none) Mus musculus RasGEF domain family,... 96 8e-18
BC074379_1(BC074379|pid:none) Xenopus laevis MGC84301 protein, m... 95 1e-17
AK095136_1(AK095136|pid:none) Homo sapiens cDNA FLJ37817 fis, cl... 95 1e-17
BT044818_1(BT044818|pid:none) Salmo salar clone ssal-rgf-504-236... 94 2e-17
AK165106_1(AK165106|pid:none) Mus musculus 2 days pregnant adult... 94 2e-17
FN357603_14(FN357603|pid:none) Schistosoma mansoni genome sequen... 94 2e-17
BC020532_1(BC020532|pid:none) Mus musculus Rap guanine nucleotid... 94 2e-17
AK162667_1(AK162667|pid:none) Mus musculus adult male bone cDNA,... 94 2e-17
(Q8BTM9) RecName: Full=RAS guanyl-releasing protein 4; &AK08928... 94 2e-17
(Q8VCC8) RecName: Full=Rap guanine nucleotide exchange factor 3;... 94 2e-17
AY040628_1(AY040628|pid:none) Mus musculus RAS guanyl releasing ... 94 2e-17
BC143530_1(BC143530|pid:none) Homo sapiens ral guanine nucleotid... 94 3e-17
BC022548_1(BC022548|pid:none) Homo sapiens RasGEF domain family,... 94 3e-17
AK074082_1(AK074082|pid:none) Homo sapiens mRNA for FLJ00153 pro... 94 3e-17
BC149035_1(BC149035|pid:none) Bos taurus ral guanine nucleotide ... 93 4e-17
(A0JM95) RecName: Full=Ras-GEF domain-containing family member 1... 92 1e-16
(Q1LZ97) RecName: Full=RAS guanyl-releasing protein 4; &BC11613... 92 1e-16
AK169430_1(AK169430|pid:none) Mus musculus 17 days pregnant adul... 91 2e-16
AF027169_1(AF027169|pid:none) Homo sapiens Ral guanine nucleotid... 91 3e-16
AB037729_1(AB037729|pid:none) Homo sapiens mRNA for KIAA1308 pro... 91 3e-16
AJ720654_1(AJ720654|pid:none) Gallus gallus mRNA for hypothetica... 91 3e-16
AK056462_1(AK056462|pid:none) Homo sapiens cDNA FLJ31900 fis, cl... 91 3e-16
AK074114_1(AK074114|pid:none) Homo sapiens mRNA for FLJ00185 pro... 91 3e-16
AK301470_1(AK301470|pid:none) Homo sapiens cDNA FLJ53221 complet... 91 3e-16
AK127524_1(AK127524|pid:none) Homo sapiens cDNA FLJ45617 fis, cl... 91 3e-16
AK293997_1(AK293997|pid:none) Homo sapiens cDNA FLJ55326 complet... 91 3e-16
AK295611_1(AK295611|pid:none) Homo sapiens cDNA FLJ50530 complet... 90 3e-16
BC155690_1(BC155690|pid:none) Xenopus tropicalis hypothetical pr... 90 3e-16
AK316526_1(AK316526|pid:none) Homo sapiens cDNA, FLJ79425 comple... 90 4e-16
BC040275_1(BC040275|pid:none) Homo sapiens Ras protein-specific ... 90 4e-16
AY048119_1(AY048119|pid:none) Homo sapiens RAS guanyl releasing ... 89 6e-16
AX556884_1(AX556884|pid:none) Sequence 1 from Patent WO0240656. 89 6e-16
FJ768681_1(FJ768681|pid:none) Homo sapiens RAS guanyl releasing ... 89 6e-16
AY048121_1(AY048121|pid:none) Homo sapiens RAS guanyl releasing ... 89 6e-16
AC024755_7(AC024755|pid:none) Caenorhabditis elegans cosmid Y34B... 89 6e-16
(Q8TDF6) RecName: Full=RAS guanyl-releasing protein 4; &AF44843... 89 6e-16
AF032126_1(AF032126|pid:none) Drosophila melanogaster ral guanin... 89 7e-16
AL590422_1(AL590422|pid:none) Human DNA sequence from clone RP11... 89 7e-16
AE014296_2462(AE014296|pid:none) Drosophila melanogaster chromos... 89 7e-16
AE014296_2459(AE014296|pid:none) Drosophila melanogaster chromos... 89 7e-16
AF186798_1(AF186798|pid:none) Homo sapiens RalGDS-like (RGL) gen... 89 7e-16
AK295179_1(AK295179|pid:none) Homo sapiens cDNA FLJ50518 complet... 89 7e-16
AF186798_2(AF186798|pid:none) Homo sapiens RalGDS-like (RGL) gen... 89 7e-16
CU638743_770(CU638743|pid:none) Podospora anserina genomic DNA c... 89 1e-15
AK159754_1(AK159754|pid:none) Mus musculus osteoclast-like cell ... 88 1e-15
AK149644_1(AK149644|pid:none) Mus musculus bone marrow macrophag... 88 1e-15
AL772249_10(AL772249|pid:none) Mouse DNA sequence from clone RP2... 88 1e-15
AK141959_1(AK141959|pid:none) Mus musculus 12 days embryo spinal... 88 1e-15
AK144218_1(AK144218|pid:none) Mus musculus CRL-2116 JC cDNA, RIK... 88 2e-15
(Q3UYI5) RecName: Full=Ral guanine nucleotide dissociation stimu... 87 2e-15
BC005037_1(BC005037|pid:none) Homo sapiens ral guanine nucleotid... 87 3e-15
(O15211) RecName: Full=Ral guanine nucleotide dissociation stimu... 87 3e-15
(Q75BH9) RecName: Full=Guanine nucleotide exchange factor LTE1; ... 86 8e-15
D21354_1(D21354|pid:none) Saccharomyces cerevisiae gene for puta... 86 8e-15
CP000499_444(CP000499|pid:none) Pichia stipitis CBS 6054 chromos... 86 8e-15
(P07866) RecName: Full=Guanine nucleotide exchange factor LTE1; ... 86 8e-15
AB208848_1(AB208848|pid:none) Homo sapiens mRNA for Ras activato... 85 1e-14
(Q03385) RecName: Full=Ral guanine nucleotide dissociation stimu... 85 1e-14
CR382137_925(CR382137|pid:none) Debaryomyces hansenii strain CBS... 85 1e-14
(Q03386) RecName: Full=Ral guanine nucleotide dissociation stimu... 84 2e-14
BX640472_3(BX640472|pid:none) Zebrafish DNA sequence from clone ... 84 2e-14
AY810144_1(AY810144|pid:none) Schistosoma japonicum SJCHGC07188 ... 84 2e-14
U58746_7(U58746|pid:none) Caenorhabditis elegans cosmid R05G6, c... 84 3e-14
T29361(T29361)hypothetical protein R05G6.10 - Caenorhabditis ele... 84 3e-14
AE017341_238(AE017341|pid:none) Cryptococcus neoformans var. neo... 83 4e-14
(Q8MVR1) RecName: Full=Cyclic GMP-binding protein C; EC... 83 5e-14
FM992695_606(FM992695|pid:none) Candida dubliniensis CD36 chromo... 82 1e-13
AK299029_1(AK299029|pid:none) Homo sapiens cDNA FLJ56134 complet... 82 1e-13
BX284747_19(BX284747|pid:none) Neurospora crassa DNA linkage gro... 81 2e-13
FM992689_618(FM992689|pid:none) Candida dubliniensis CD36 chromo... 80 3e-13
CR382138_57(CR382138|pid:none) Debaryomyces hansenii strain CBS7... 80 3e-13
U82163_1(U82163|pid:none) Oryctolagus cuniculus oncogene rsc mRN... 80 3e-13
AK304293_1(AK304293|pid:none) Homo sapiens cDNA FLJ52394 complet... 80 5e-13
CR382123_145(CR382123|pid:none) Kluyveromyces lactis strain NRRL... 80 5e-13
(Q6FT12) RecName: Full=Guanine nucleotide exchange factor LTE1; ... 80 5e-13
AF053308_1(AF053308|pid:none) Drosophila affinis putative guanin... 80 5e-13
CU928168_88(CU928168|pid:none) Kluyveromyces thermotolerans stra... 80 5e-13
AM989988_10(AM989988|pid:none) Zygosaccharomyces rouxii strain C... 80 5e-13
U42834_3(U42834|pid:none) Caenorhabditis elegans cosmid F28B4, c... 79 1e-12
CR861270_1(CR861270|pid:none) Pongo abelii mRNA; cDNA DKFZp459K0... 78 2e-12
AE016819_863(AE016819|pid:none) Ashbya gossypii (= Eremothecium ... 77 3e-12
BC057759_1(BC057759|pid:none) Homo sapiens RasGEF domain family,... 77 3e-12
CU638744_132(CU638744|pid:none) Podospora anserina genomic DNA c... 77 4e-12
AP007151_629(AP007151|pid:none) Aspergillus oryzae RIB40 genomic... 76 5e-12
CR380948_48(CR380948|pid:none) Candida glabrata strain CBS138 ch... 76 7e-12
AM920433_156(AM920433|pid:none) Penicillium chrysogenum Wisconsi... 76 7e-12
AK096811_1(AK096811|pid:none) Homo sapiens cDNA FLJ39492 fis, cl... 74 2e-11
BC047924_1(BC047924|pid:none) Homo sapiens kinase non-catalytic ... 74 3e-11
AC093747_1(AC093747|pid:none) Homo sapiens BAC clone RP11-29L8 f... 72 1e-10
BX571854_2(BX571854|pid:none) Zebrafish DNA sequence from clone ... 71 2e-10
U68142_1(U68142|pid:none) Human RalGDS-like 2 (RGL2) mRNA, parti... 71 2e-10
AF202722_1(AF202722|pid:none) Danio rerio ras-associated protein... 70 4e-10
AK028308_1(AK028308|pid:none) Mus musculus adult male brain cDNA... 69 8e-10
DQ246664_3(DQ246664|pid:none) Oncorhynchus mykiss SYPG1 (SYPG1),... 67 3e-09
AK147672_1(AK147672|pid:none) Mus musculus cDNA, RIKEN full-leng... 67 3e-09
AK147693_1(AK147693|pid:none) Mus musculus adult male brain UNDE... 67 3e-09
(Q8BXJ3) RecName: Full=Protein very KIND; AltName: Full=Kinase n... 67 3e-09
AK147335_1(AK147335|pid:none) Mus musculus cDNA, RIKEN full-leng... 67 3e-09
AJ580324_1(AJ580324|pid:none) Mus musculus mRNA for Very KIND pr... 67 3e-09
BC150787_1(BC150787|pid:none) Mus musculus kinase non-catalytic ... 67 3e-09
FJ768679_1(FJ768679|pid:none) Homo sapiens RAS guanyl releasing ... 65 9e-09
FN357907_3(FN357907|pid:none) Schistosoma mansoni genome sequenc... 64 2e-08
Z50740_3(Z50740|pid:none) Caenorhabditis elegans Cosmid F31B12, ... 64 3e-08
Z50740_4(Z50740|pid:none) Caenorhabditis elegans Cosmid F31B12, ... 64 3e-08
T21581(T21581)hypothetical protein F31B12.1 - Caenorhabditis ele... 64 3e-08
Z50740_6(Z50740|pid:none) Caenorhabditis elegans Cosmid F31B12, ... 64 3e-08
Z50740_1(Z50740|pid:none) Caenorhabditis elegans Cosmid F31B12, ... 64 3e-08
AF044576_1(AF044576|pid:none) Caenorhabditis elegans phospholipa... 64 3e-08
BX908798_1363(BX908798|pid:none) Parachlamydia-related symbiont ... 64 3e-08
FJ768677_1(FJ768677|pid:none) Homo sapiens RAS guanyl releasing ... 62 8e-08
CR749239_1(CR749239|pid:none) Homo sapiens mRNA; cDNA DKFZp781H1... 61 2e-07
FJ768678_1(FJ768678|pid:none) Homo sapiens RAS guanyl releasing ... 61 2e-07
M68938_1(M68938|pid:none) Yeast (BUD5) gene, complete cds. 59 1e-06
X56909_5(X56909|pid:none) S.cerevisiae 8.2 kb segment left of MAT. 59 1e-06
(P25300) RecName: Full=Bud site selection protein 5; &X59720_11... 58 1e-06
X63853_1(X63853|pid:none) S.cerevisiae MAT locus genes BUD5, mat... 58 1e-06
EU919685_1(EU919685|pid:none) Danio rerio phospholipase C epsilo... 57 2e-06
BC139712_1(BC139712|pid:none) Danio rerio similar to Ral guanine... 57 3e-06
(Q8IZJ4) RecName: Full=Ral-GDS-related protein; Short=h... 55 1e-05
(Q8K4S1) RecName: Full=1-phosphatidylinositol-4,5-bisphosphate p... 55 2e-05
(Q99P84) RecName: Full=1-phosphatidylinositol-4,5-bisphosphate p... 55 2e-05
FN357537_13(FN357537|pid:none) Schistosoma mansoni genome sequen... 52 1e-04
AB040949_1(AB040949|pid:none) Homo sapiens mRNA for KIAA1516 pro... 51 2e-04
AF170071_1(AF170071|pid:none) Homo sapiens phospholipase C epsil... 51 2e-04
AF190642_1(AF190642|pid:none) Homo sapiens phosphoinositide-spec... 51 2e-04
AL139118_1(AL139118|pid:none) Human DNA sequence from clone RP11... 51 2e-04
AL139118_2(AL139118|pid:none) Human DNA sequence from clone RP11... 51 2e-04
(Q9UHV3) RecName: Full=1-phosphatidylinositol-4,5-bisphosphate p... 51 2e-04
BC101109_1(BC101109|pid:none) Homo sapiens ral guanine nucleotid... 50 5e-04
AK131340_1(AK131340|pid:none) Homo sapiens cDNA FLJ16354 fis, cl... 49 9e-04
BC101108_1(BC101108|pid:none) Homo sapiens ral guanine nucleotid... 49 0.001
BC101110_1(BC101110|pid:none) Homo sapiens ral guanine nucleotid... 49 0.001
AL160276_4(AL160276|pid:none) Human DNA sequence from clone RP11... 47 0.002
AK302825_1(AK302825|pid:none) Homo sapiens cDNA FLJ56976 complet... 46 0.007
AB010891_1(AB010891|pid:none) Halocynthia roretzi HrSH2 mRNA, co... 46 0.007
AE014134_591(AE014134|pid:none) Drosophila melanogaster chromoso... 45 0.012
AX275027_1(AX275027|pid:none) Sequence 1 from Patent WO0175121. 45 0.016
AF295775_1(AF295775|pid:none) Homo sapiens ral guanine nucleotid... 44 0.036
AK097292_1(AK097292|pid:none) Homo sapiens cDNA FLJ39973 fis, cl... 43 0.047
AK301205_1(AK301205|pid:none) Homo sapiens cDNA FLJ50071 complet... 42 0.11
BC124609_1(BC124609|pid:none) Danio rerio DEP domain containing ... 42 0.14
(Q6FK84) RecName: Full=Vacuolar membrane-associated protein IML1... 42 0.14
H64121(H64121) type II site-specific deoxyribonuclease (EC 3.1.2... 42 0.14
AC016795_21(AC016795|pid:none) Arabidopsis thaliana chromosome I... 41 0.18
AE014298_1667(AE014298|pid:none) Drosophila melanogaster chromos... 41 0.23
U02491_1(U02491|pid:none) Drosophila melanogaster dishevelled pr... 41 0.23
FN357484_25(FN357484|pid:none) Schistosoma mansoni genome sequen... 40 0.40
AP008971_124(AP008971|pid:none) Finegoldia magna ATCC 29328 DNA,... 40 0.40
CU928174_368(CU928174|pid:none) Zygosaccharomyces rouxii strain ... 40 0.52
CP001080_1052(CP001080|pid:none) Sulfurihydrogenibium sp. YO3AOP... 38 1.5
AY686639_4(AY686639|pid:none) Pseudomonas putida strain KL33 phe... 38 2.0
X80765_4(X80765|pid:none) P.putida genes for phenolhydroxylase. 38 2.0
(P47170) RecName: Full=Vacuolar membrane-associated protein IML1... 38 2.0
BC014426_1(BC014426|pid:none) Homo sapiens ral guanine nucleotid... 37 2.6
AF143848_1(AF143848|pid:none) Gallus gallus pleckstrin mRNA, com... 37 2.6
AE016819_818(AE016819|pid:none) Ashbya gossypii (= Eremothecium ... 37 2.6
CP001176_2047(CP001176|pid:none) Bacillus cereus B4264, complete... 37 3.4
CP000721_4036(CP000721|pid:none) Clostridium beijerinckii NCIMB ... 37 3.4
AY458638_2(AY458638|pid:none) Uncultured marine bacterium 441 cl... 37 3.4
AE016877_2019(AE016877|pid:none) Bacillus cereus ATCC 14579, com... 37 3.4
BA000045_1537(BA000045|pid:none) Gloeobacter violaceus PCC 7421 ... 37 3.4
(Q5AW24) RecName: Full=Vacuolar membrane-associated protein iml1; 37 3.4
EU681965_1(EU681965|pid:none) Mus musculus strain MRL/MpJ Depdc6... 37 3.4
BT072585_1(BT072585|pid:none) Salmo salar clone ssal-rgf-531-222... 37 4.4
AB016859_1(AB016859|pid:none) Pseudomonas putida gene for phenol... 37 4.4
EU681963_1(EU681963|pid:none) Mus musculus strain MRL/MpJ Depdc6... 37 4.4
AB016857_1(AB016857|pid:none) Pseudomonas putida gene for phenol... 37 4.4
EU681962_1(EU681962|pid:none) Mus musculus strain BALB/cJ Depdc6... 37 4.4
(Q570Y9) RecName: Full=DEP domain-containing protein 6; &BC1566... 37 4.4
AK315175_1(AK315175|pid:none) Homo sapiens cDNA, FLJ96152, highl... 37 4.4
BC157940_1(BC157940|pid:none) Mus musculus phosphatidylinositol-... 37 4.4
AB016854_1(AB016854|pid:none) Pseudomonas putida gene for phenol... 37 4.4
AK145208_1(AK145208|pid:none) Mus musculus mammary gland RCB-052... 37 4.4
(Q69ZK0) RecName: Full=Phosphatidylinositol 3,4,5-trisphosphate-... 37 4.4
AL591884_1(AL591884|pid:none) Mouse DNA sequence from clone RP23... 37 4.4
(Q8TB45) RecName: Full=DEP domain-containing protein 6; &BC0247... 37 4.4
(P19732) RecName: Full=Phenol hydroxylase P3 protein; E... 37 4.4
(Q75DV2) RecName: Full=Vacuolar membrane-associated protein IML1... 36 5.8
AK017939_1(AK017939|pid:none) Mus musculus adult male thymus cDN... 36 5.8
(Q1XD95) RecName: Full=Uncharacterized sensor-like histidine kin... 36 5.8
BC063738_1(BC063738|pid:none) Xenopus laevis hypothetical protei... 36 7.5
CR450767_1(CR450767|pid:none) Zebrafish DNA sequence from clone ... 36 7.5
AJ535615_1(AJ535615|pid:none) Human immunodeficiency virus type ... 35 9.8
BC156402_1(BC156402|pid:none) Synthetic construct Homo sapiens c... 35 9.8
U21322_5(U21322|pid:none) Caenorhabditis elegans cosmid K10D2, c... 35 9.8
(P51392) RecName: Full=Uncharacterized sensor-like histidine kin... 35 9.8
(Q21341) RecName: Full=Protein let-99; AltName: Full=Lethal prot... 35 9.8
AK067986_1(AK067986|pid:none) Oryza sativa Japonica Group cDNA c... 35 9.8
CU638743_255(CU638743|pid:none) Podospora anserina genomic DNA c... 35 9.8
AB037836_1(AB037836|pid:none) Homo sapiens mRNA for KIAA1415 pro... 35 9.8
AJ320261_1(AJ320261|pid:none) Homo sapiens mRNA for P-Rex1 prote... 35 9.8

>AY254473_1(AY254473|pid:none) Dictyostelium discoideum nucleotide
exchange factor RasGEF Q (gefQ) gene, complete cds.
Length = 1298

Score = 565 bits (1456), Expect = e-159
Identities = 280/280 (100%), Positives = 280/280 (100%)
Frame = +1

Query: 1297 IYYFIFENINFPEPIVPKTFFSSPNSTFSITFLDIHPVEIARQLTLIDYELFKKLSPTDF 1476
IYYFIFENINFPEPIVPKTFFSSPNSTFSITFLDIHPVEIARQLTLIDYELFKKLSPTDF
Sbjct: 929 IYYFIFENINFPEPIVPKTFFSSPNSTFSITFLDIHPVEIARQLTLIDYELFKKLSPTDF 988

Query: 1477 YHTAWSKPDAKEKVPNLINFINRSNTVSYWVATEILSSSNIKHRVSVLKRFITIAEILRK 1656
YHTAWSKPDAKEKVPNLINFINRSNTVSYWVATEILSSSNIKHRVSVLKRFITIAEILRK
Sbjct: 989 YHTAWSKPDAKEKVPNLINFINRSNTVSYWVATEILSSSNIKHRVSVLKRFITIAEILRK 1048

Query: 1657 FHNWNTLTGILMGLNLGSIQRLKKTWESIDKKQLDSLQNLINLTSERLNYSNYRKEMSTP 1836
FHNWNTLTGILMGLNLGSIQRLKKTWESIDKKQLDSLQNLINLTSERLNYSNYRKEMSTP
Sbjct: 1049 FHNWNTLTGILMGLNLGSIQRLKKTWESIDKKQLDSLQNLINLTSERLNYSNYRKEMSTP 1108

Query: 1837 TYPCLPFMAVYLKDLYFIEENPDYLENGYINFEKMKMISKVLIEIKRYQTEQYWLKKIDA 2016
TYPCLPFMAVYLKDLYFIEENPDYLENGYINFEKMKMISKVLIEIKRYQTEQYWLKKIDA
Sbjct: 1109 TYPCLPFMAVYLKDLYFIEENPDYLENGYINFEKMKMISKVLIEIKRYQTEQYWLKKIDA 1168

Query: 2017 IENILKSVVLTDKDLYKASHMIEQPQRTMTVGSNLKAQSF 2136
IENILKSVVLTDKDLYKASHMIEQPQRTMTVGSNLKAQSF
Sbjct: 1169 IENILKSVVLTDKDLYKASHMIEQPQRTMTVGSNLKAQSF 1208

Score = 484 bits (1246), Expect = e-135
Identities = 245/245 (100%), Positives = 245/245 (100%)
Frame = +1

Query: 118 QLNNGKNLIGLVYNDKDEVIAGERDKIIGLFTDISKVTGTQFLEEFLFTYHYYMTSVDLL 297
QLNNGKNLIGLVYNDKDEVIAGERDKIIGLFTDISKVTGTQFLEEFLFTYHYYMTSVDLL
Sbjct: 536 QLNNGKNLIGLVYNDKDEVIAGERDKIIGLFTDISKVTGTQFLEEFLFTYHYYMTSVDLL 595

Query: 298 ENLKGRFNNPLMDQAAQSISILEENHDKVKIEQLSTHIRLRVINVIKKWIENHGYAFATD 477
ENLKGRFNNPLMDQAAQSISILEENHDKVKIEQLSTHIRLRVINVIKKWIENHGYAFATD
Sbjct: 596 ENLKGRFNNPLMDQAAQSISILEENHDKVKIEQLSTHIRLRVINVIKKWIENHGYAFATD 655

Query: 478 INLYQMLVDFIDGDVMSFSQRWGQYLKKAINDSGCLLRYIAVNVKEASSKQLREIISLDN 657
INLYQMLVDFIDGDVMSFSQRWGQYLKKAINDSGCLLRYIAVNVKEASSKQLREIISLDN
Sbjct: 656 INLYQMLVDFIDGDVMSFSQRWGQYLKKAINDSGCLLRYIAVNVKEASSKQLREIISLDN 715

Query: 658 LDAISKLMSQSLQLKERKKGLKVIKNSFTGNEAVEWLINKFNLDSKDEALETLSKMLQSN 837
LDAISKLMSQSLQLKERKKGLKVIKNSFTGNEAVEWLINKFNLDSKDEALETLSKMLQSN
Sbjct: 716 LDAISKLMSQSLQLKERKKGLKVIKNSFTGNEAVEWLINKFNLDSKDEALETLSKMLQSN 775

Query: 838 LIFHH 852
LIFHH
Sbjct: 776 LIFHH 780

Lambda K H
0.318 0.134 0.401

Gapped
Lambda K H
0.267 0.0410 0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3236559
Number of Hits to DB: 2,542,191,023
Number of extensions: 43558987
Number of successful extensions: 129476
Number of sequences better than 10.0: 439
Number of HSP's gapped: 128922
Number of HSP's successfully gapped: 486
Length of query: 808
Length of database: 1,051,180,864
Length adjustment: 137
Effective length of query: 671
Effective length of database: 607,772,281
Effective search space: 407815200551
Effective search space used: 407815200551
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)

PSORT

psg: 0.86 gvh: 0.30 alm: 0.44 top: 0.33 tms: 0.00 mit: 0.18 mip: 0.00
nuc: 0.00 erl: 0.00 erm: 0.20 pox: 0.00 px2: 0.50 vac: 0.00 rnp: 0.00
act: 0.00 caa: 0.00 yqr: 0.00 tyr: 0.00 leu: 0.00 gpi: 0.00 myr: 0.00
dna: 0.00 rib: 0.00 bac: 0.00 m1a: 0.00 m1b: 0.00 m2 : 0.00 mNt: 0.00
m3a: 0.00 m3b: 0.00 m_ : 1.00

48.0 %: nuclear
32.0 %: cytoplasmic
12.0 %: mitochondrial
4.0 %: cytoskeletal
4.0 %: endoplasmic reticulum

>> prediction for Contig-U14691-1 is nuc

VS (DIR, S) 0
VH (FL, L) 1
VF (FL, S) 0
AH (FL, L) 0
AF (FL, S) 0
SL (DIR, L) 1
SS (DIR, S) 0
SH (FL, L) 0
SF (FL, S) 0
CH (FL, L) 0
CF (FL, S) 0
FCL (DIR, L) 0
FC (DIR, S) 0
FC-IC (SUB) 0