Contig-U14684-1
Contig ID Contig-U14684-1
Contig update 2002.12.18
Contig sequence
>Contig-U14684-1 (Contig-U14684-1Q) /CSM_Contig/Contig-U14684-1Q.Seq.d
AAAAAAAAAAATCAAAAAAAATATTTAGGAATACCCATTTTATTTTAGGA
AATTTAGTTTGCATGATATTTCATTAAAATGGGATACAAAGAACAACAAA
ACCCAGATGCAGTGGATCGTTTGGATTTAGCATATAGGGATATCATTGAA
ATTAACCCACAAATTGTTGACAGATTTGGACCATATGTAAAAGAATTAGA
TTTATCAAATAATAATCTTGAAAAGGATTTAACAATATTAGAAGGATTTA
AAAGATTAACAACATTAGTTTTAGATAATAATAGAATAACACATCATATA
AAATTCCCATTATTAACACAATTACATACATTATGGATAAATAGTAATCA
AATTAGTAATCTTAGTGTATTTGTTGATAGAGTTTGTGAATCATTTCCAA
ATATTCGTACATTCTCAATGTTAAAGAATGAAGCATGTCCAAACTTTTTC
AATGGTCATTCATTGAGAGANTATAAAGATTATAGATTATATATTATNTC
AAGATTAAAATATGTACAGATATTAGATTCAACACCAGTAACACCAGAGG
AAAGAGTCGATGCAATTAAACTATATGGTAATTTCAATACTGTCAATCAA
TCACTTGCAAATTCAACACCAAAACCAACATTAGCACCAGCAGAAGTAGA
AATTGAGGATGATCCAAAAAAGAAAAGAGAAGAAAAATTAAAAAAAACTT
TACAAGAAAAAGAACAAAAGGAAAAAGAAAAACAAGAAAGAAGGGAAAGA
AGGCGTTTAAAAAGAGAGGGAAAAGAAGAAAGAACATTTAAAAAATTACA
AGAAAAACAAAAATTACAACAACAACAACAACTTGATACTGATTCAACTA
TTACAAACAAAGATGATTTCACTTCTGATGAAGAAGAAGATAATAGTAAT
AATAATAATAATAATAATAATTTAGCTACACCAGTCAAACCAACTACCAC
TAAAAATTCATTACCAATATTCTCAAGTGAACAATCACCAGCATCAACTA
TTTTACCACCAAATCCACAAAAACAATCAGCTTATGAATCTCATGATATC
GCAGATGATGAAGCATTCACCGCAGATTCTTCTGATCATTCAGATTTACC
ATTGTATAAAAATTCAACAACAAGTACTCCACCACCACCACCAAATACAT
TACTTTCACCCCAACCAAATAACATTCAACTTAAACCTCAAAATGAAGAT
GACGATGACGATGATGATGATGATGAAGAAGAGGAAGAGTCTGAAACTGA
AAGTTCAGATTGGTCATCAGAGTCCTTAGATAATGATGATGAAGAAGTTA
ACCAAATCAATTCCAAATTACCAACTAAAATGACTTTAAGAGATCAATAC
TATCAAGGTGATGATGATGACGATGATGATGAATCAGAGGAAGAATATAC
TCATTTTCCAGTTAGACCAATTAAAAAATAAAAAGAAAAACAAATAAAAA
TTATTTATATTAAAAA

Gap no gap
Contig length 1466
Chromosome number (1..6, M) -
Chromosome length -
Start point -
End point -
Strand (PLUS/MINUS) -
Number of clones 3
Number of EST 3
Link to clone list U14684
List of clone(s)

est1=SLC858E,1,1463
est2=VFD294Z,753,1351
est3=SLD495Z,883,1467
Translated Amino Acid sequence
kkknqkkylgipilf*ei*fa*YFIKMGYKEQQNPDAVDRLDLAYRDIIEINPQIVDRFG
PYVKELDLSNNNLEKDLTILEGFKRLTTLVLDNNRITHHIKFPLLTQLHTLWINSNQISN
LSVFVDRVCESFPNIRTFSMLKNEACPNFFNGHSLRXYKDYRLYIXSRLKYVQILDSTPV
TPEERVDAIKLYGNFNTVNQSLANSTPKPTLAPAEVEIEDDPKKKREEKLKKTLQEKEQK
EKEKQERRERRRLKREGKEERTFKKLQEKQKLQQQQQLDTDSTITNKDDFTSDEEEDNSN
NNNNNNNLATPVKPTTTKNSLPIFSSEQSPASTILPPNPQKQSAYESHDIADDEAFTADS
SDHSDLPLYKNSTTSTPPPPPNTLLSPQPNNIQLKPQNEDDDDDDDDDEEEEESETESSD
WSSESLDNDDEEVNQINSKLPTKMTLRDQYYQGDDDDDDDESEEEYTHFPVRPIKK*kek
qikiiyik


Translated Amino Acid sequence (All Frames)
Frame A:
kkknqkkylgipilf*ei*fa*YFIKMGYKEQQNPDAVDRLDLAYRDIIEINPQIVDRFG
PYVKELDLSNNNLEKDLTILEGFKRLTTLVLDNNRITHHIKFPLLTQLHTLWINSNQISN
LSVFVDRVCESFPNIRTFSMLKNEACPNFFNGHSLRXYKDYRLYIXSRLKYVQILDSTPV
TPEERVDAIKLYGNFNTVNQSLANSTPKPTLAPAEVEIEDDPKKKREEKLKKTLQEKEQK
EKEKQERRERRRLKREGKEERTFKKLQEKQKLQQQQQLDTDSTITNKDDFTSDEEEDNSN
NNNNNNNLATPVKPTTTKNSLPIFSSEQSPASTILPPNPQKQSAYESHDIADDEAFTADS
SDHSDLPLYKNSTTSTPPPPPNTLLSPQPNNIQLKPQNEDDDDDDDDDEEEEESETESSD
WSSESLDNDDEEVNQINSKLPTKMTLRDQYYQGDDDDDDDESEEEYTHFPVRPIKK*kek
qikiiyik


Frame B:
kkkikkni*eypfyfrkfslhdislkwdtknnktqmqwivwi*higislklthklltdld
hm*kn*iyqiiilkri*qy*kdlkd*qh*f*iiie*hii*nshy*hnyihyg*iviklvi
lvylliefvnhfqifvhsqc*rmkhvqtfsmvih*exikiidyilxqd*nmyry*iqhq*
hqrkesmqlnymvisilsinhlqiqhqnqh*hqqk*klrmiqkrkekkn*kklykkknkr
kkknkkegkegv*kerekkkehlknykknknynnnnnliliqllqtkmisllmkkkiivi
iiiiiii*lhqsnqlplkihyqysqvnnhqhqlfyhqihknnqlmnlmisqmmkhspqil
liiqiyhcikiqqqvlhhhhqihyfhpnqitfnlnlkmkmtmtmmmmmkkrkslklkvqi
ghqsp*immmkkltksipnyqlk*l*eintikvmmmtmmmnqrknilifqldqlknkkkn
k*klfilk


Frame C:
kkkskkifrnthfilgnlvcmifh*ngiqrttkprcsgsfgfsi*gyh*n*ptnc*qiwt
ickrirfik**s*kgfnnirri*kinnisfr***nntsykipiintityimdk**sn**s
*cic**sl*iiskysyilnvke*smsklfqwsfierx*rl*iiyyxkikictdirfntsn
trgksrcn*tiw*fqycqsitckfntktnistsrsrn*g*skkekrrkikknftrkrtkg
krktrkkgkkafkkrgkrrkni*kitrktkitttttt*y*fnyykqr*fhf**rrr****
******fsytsqtnyh*kfitnilk*titsinyfttkstktisl*is*yrr**sihrrff
*sfrftiv*kfnnkysttttkyitftptk*hst*tsk*r*r*r*****rrgrv*n*kfrl
virvlr****rs*pnqfqitn*ndfkrsilsr****r***irgriysfss*tn*kikrkt
nknyly*k


own update 2004. 6.10
Homology vs CSM-cDNA
Query= Contig-U14684-1 (Contig-U14684-1Q)
/CSM_Contig/Contig-U14684-1Q.Seq.d
(1466 letters)

Database: CSM
6905 sequences; 5,674,871 total letters


Score E
Sequences producing significant alignments: (bits) Value

Contig-U14684-1 (Contig-U14684-1Q) /CSM_Contig/Conti... 1265 0.0
Contig-U09050-1 (Contig-U09050-1Q) /CSM_Contig/Conti... 42 0.002
Contig-U12422-1 (Contig-U12422-1Q) /CSM_Contig/Conti... 40 0.007
Contig-U09541-1 (Contig-U09541-1Q) /CSM_Contig/Conti... 40 0.007
Contig-U04139-1 (Contig-U04139-1Q) /CSM_Contig/Conti... 40 0.007
Contig-U11349-1 (Contig-U11349-1Q) /CSM_Contig/Conti... 38 0.026
Contig-U11181-1 (Contig-U11181-1Q) /CSM_Contig/Conti... 38 0.026
Contig-U08943-1 (Contig-U08943-1Q) /CSM_Contig/Conti... 38 0.026
Contig-U04046-1 (Contig-U04046-1Q) /CSM_Contig/Conti... 38 0.026
Contig-U01736-1 (Contig-U01736-1Q) /CSM_Contig/Conti... 38 0.026

>Contig-U14684-1 (Contig-U14684-1Q) /CSM_Contig/Contig-U14684-1Q.Seq.d
Length = 1466

Score = 1265 bits (638), Expect = 0.0
Identities = 644/644 (100%)
Strand = Plus / Plus


Query: 22 tatttaggaatacccattttattttaggaaatttagtttgcatgatatttcattaaaatg 81
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 22 tatttaggaatacccattttattttaggaaatttagtttgcatgatatttcattaaaatg 81


Query: 82 ggatacaaagaacaacaaaacccagatgcagtggatcgtttggatttagcatatagggat 141
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 82 ggatacaaagaacaacaaaacccagatgcagtggatcgtttggatttagcatatagggat 141


Query: 142 atcattgaaattaacccacaaattgttgacagatttggaccatatgtaaaagaattagat 201
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 142 atcattgaaattaacccacaaattgttgacagatttggaccatatgtaaaagaattagat 201


Query: 202 ttatcaaataataatcttgaaaaggatttaacaatattagaaggatttaaaagattaaca 261
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 202 ttatcaaataataatcttgaaaaggatttaacaatattagaaggatttaaaagattaaca 261


Query: 262 acattagttttagataataatagaataacacatcatataaaattcccattattaacacaa 321
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 acattagttttagataataatagaataacacatcatataaaattcccattattaacacaa 321


Query: 322 ttacatacattatggataaatagtaatcaaattagtaatcttagtgtatttgttgataga 381
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 ttacatacattatggataaatagtaatcaaattagtaatcttagtgtatttgttgataga 381


Query: 382 gtttgtgaatcatttccaaatattcgtacattctcaatgttaaagaatgaagcatgtcca 441
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 gtttgtgaatcatttccaaatattcgtacattctcaatgttaaagaatgaagcatgtcca 441


Query: 442 aactttttcaatggtcattcattgagagantataaagattatagattatatattatntca 501
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 aactttttcaatggtcattcattgagagantataaagattatagattatatattatntca 501


Query: 502 agattaaaatatgtacagatattagattcaacaccagtaacaccagaggaaagagtcgat 561
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 502 agattaaaatatgtacagatattagattcaacaccagtaacaccagaggaaagagtcgat 561


Query: 562 gcaattaaactatatggtaatttcaatactgtcaatcaatcacttgcaaattcaacacca 621
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 562 gcaattaaactatatggtaatttcaatactgtcaatcaatcacttgcaaattcaacacca 621


Query: 622 aaaccaacattagcaccagcagaagtagaaattgaggatgatcc 665
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 622 aaaccaacattagcaccagcagaagtagaaattgaggatgatcc 665


Score = 535 bits (270), Expect = e-152
Identities = 270/270 (100%)
Strand = Plus / Plus


Query: 922 ttagctacaccagtcaaaccaactaccactaaaaattcattaccaatattctcaagtgaa 981
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 922 ttagctacaccagtcaaaccaactaccactaaaaattcattaccaatattctcaagtgaa 981


Query: 982 caatcaccagcatcaactattttaccaccaaatccacaaaaacaatcagcttatgaatct 1041
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 982 caatcaccagcatcaactattttaccaccaaatccacaaaaacaatcagcttatgaatct 1041


Query: 1042 catgatatcgcagatgatgaagcattcaccgcagattcttctgatcattcagatttacca 1101
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1042 catgatatcgcagatgatgaagcattcaccgcagattcttctgatcattcagatttacca 1101


Query: 1102 ttgtataaaaattcaacaacaagtactccaccaccaccaccaaatacattactttcaccc 1161
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1102 ttgtataaaaattcaacaacaagtactccaccaccaccaccaaatacattactttcaccc 1161


Query: 1162 caaccaaataacattcaacttaaacctcaa 1191
||||||||||||||||||||||||||||||
Sbjct: 1162 caaccaaataacattcaacttaaacctcaa 1191


Score = 262 bits (132), Expect = 1e-69
Identities = 132/132 (100%)
Strand = Plus / Plus


Query: 1227 agaagaggaagagtctgaaactgaaagttcagattggtcatcagagtccttagataatga 1286
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1227 agaagaggaagagtctgaaactgaaagttcagattggtcatcagagtccttagataatga 1286


Query: 1287 tgatgaagaagttaaccaaatcaattccaaattaccaactaaaatgactttaagagatca 1346
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1287 tgatgaagaagttaaccaaatcaattccaaattaccaactaaaatgactttaagagatca 1346


Query: 1347 atactatcaagg 1358
||||||||||||
Sbjct: 1347 atactatcaagg 1358


Score = 113 bits (57), Expect = 6e-25
Identities = 57/57 (100%)
Strand = Plus / Plus


Query: 833 ttgatactgattcaactattacaaacaaagatgatttcacttctgatgaagaagaag 889
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 833 ttgatactgattcaactattacaaacaaagatgatttcacttctgatgaagaagaag 889


Score = 73.8 bits (37), Expect = 5e-13
Identities = 37/37 (100%)
Strand = Plus / Plus


Query: 1383 atcagaggaagaatatactcattttccagttagacca 1419
|||||||||||||||||||||||||||||||||||||
Sbjct: 1383 atcagaggaagaatatactcattttccagttagacca 1419


Score = 30.2 bits (15), Expect = 6.4
Identities = 15/15 (100%)
Strand = Plus / Plus


Query: 1283 atgatgatgaagaag 1297
|||||||||||||||
Sbjct: 1217 atgatgatgaagaag 1231


>Contig-U09050-1 (Contig-U09050-1Q) /CSM_Contig/Contig-U09050-1Q.Seq.d
Length = 1367

Score = 42.1 bits (21), Expect = 0.002
Identities = 21/21 (100%)
Strand = Plus / Plus


Query: 1129 ccaccaccaccaccaaataca 1149
|||||||||||||||||||||
Sbjct: 500 ccaccaccaccaccaaataca 520


Score = 32.2 bits (16), Expect = 1.6
Identities = 16/16 (100%)
Strand = Plus / Plus


Query: 1128 tccaccaccaccacca 1143
||||||||||||||||
Sbjct: 496 tccaccaccaccacca 511


>Contig-U12422-1 (Contig-U12422-1Q) /CSM_Contig/Contig-U12422-1Q.Seq.d
Length = 1438

Score = 40.1 bits (20), Expect = 0.007
Identities = 23/24 (95%)
Strand = Plus / Plus


Query: 1120 acaagtactccaccaccaccacca 1143
|||| |||||||||||||||||||
Sbjct: 117 acaaatactccaccaccaccacca 140


Score = 34.2 bits (17), Expect = 0.41
Identities = 17/17 (100%)
Strand = Plus / Plus


Query: 1128 tccaccaccaccaccaa 1144
|||||||||||||||||
Sbjct: 323 tccaccaccaccaccaa 339


Score = 32.2 bits (16), Expect = 1.6
Identities = 16/16 (100%)
Strand = Plus / Plus


Query: 1128 tccaccaccaccacca 1143
||||||||||||||||
Sbjct: 251 tccaccaccaccacca 266


Database: CSM
Posted date: Jun 9, 2004 7:35 PM
Number of letters in database: 5,674,871
Number of sequences in database: 6905

Lambda K H
1.37 0.711 1.31

Gapped
Lambda K H
1.37 0.711 1.31


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 19,803
Number of Sequences: 6905
Number of extensions: 19803
Number of successful extensions: 2873
Number of sequences better than 10.0: 402
length of query: 1466
length of database: 5,674,871
effective HSP length: 16
effective length of query: 1450
effective length of database: 5,564,391
effective search space: 8068366950
effective search space used: 8068366950
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 15 (30.2 bits)
dna update 2008.12.28
Homology vs DNA
Query= Contig-U14684-1 (Contig-U14684-1Q) /CSM_Contig/Contig-U14684-1Q.Seq.d
(1466 letters)

Database: ddbj_A
92,845,959 sequences; 95,242,211,685 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value N

(AU061078) Dictyostelium discoideum slug cDNA, clone SLC858. 1209 0.0 1
(AU052541) Dictyostelium discoideum slug cDNA, clone SLD495. 529 0.0 3
(AU034426) Dictyostelium discoideum slug cDNA, clone SLC858. 505 0.0 3
(BJ430599) Dictyostelium discoideum cDNA clone:ddv7k24, 3' e... 379 0.0 4
(AC231095) Bos taurus clone CH240-491L21, WORKING DRAFT SEQU... 40 0.003 6
(AC116957) Dictyostelium discoideum chromosome 2 map 1685067... 40 0.019 13
(DU405596) 1098448375144 CHORI-243 Ovis aries genomic clone ... 44 0.35 2
(AB023045) Arabidopsis thaliana genomic DNA, chromosome 3, P... 48 0.95 1
(AC095035) Homo sapiens chromosome 1 clone RP11-159J16, comp... 48 0.95 1
(AC179469) Strongylocentrotus purpuratus clone R3-1036O13, W... 48 0.95 1
(ET773445) CHO_OF566xd12r1.ab1 CHO_OF Nicotiana tabacum geno... 48 0.95 1
(EJ000906) 1091120732239 Global-Ocean-Sampling_GS-26-01-01-1... 48 0.95 1
(EE144125) SiJWA07BDE2 Lausanne fire ant library Solenopsis ... 48 0.95 1
(EB679511) KG9B.107H11F.060120T7 KG9B Nicotiana tabacum cDNA... 48 0.95 1
(CN852183) Pi200-3 Pitch canker resistant slash pine challen... 42 2.2 2
(AC166954) Bos taurus clone CH240-188K18, WORKING DRAFT SEQU... 44 2.7 6
(AP006379) Lotus japonicus genomic DNA, chromosome 1, clone:... 42 3.5 4
(AC140941) Gallus gallus BAC clone TAM32-50C3 from chromosom... 46 3.8 1
(AC166830) Mus musculus BAC clone RP23-246O1 from chromosome... 46 3.8 1
(AC162912) Mus musculus BAC clone RP24-381G1 from chromosome... 46 3.8 1
(AC113246) Mus musculus chromosome 6, clone RP23-315E20, com... 46 3.8 1
(AC140039) Mus musculus chromosome 13 clone RP24-253M21 map ... 46 3.8 1
(AC196929) Gallus gallus chromosome UNKNOWN clone CH261-173D... 46 3.8 1
(FI012621) CHO_OF6913xb08f1.ab1 CHO_OF6 Nicotiana tabacum ge... 46 3.8 1
(FH605544) CHO_OF4926xj22r1.ab1 CHO_OF4 Nicotiana tabacum ge... 46 3.8 1
(EJ032497) 1095454053168 Global-Ocean-Sampling_GS-26-01-01-1... 46 3.8 1
(AC174375) Medicago truncatula chromosome 6 clone mth2-56h19... 42 6.7 3
(AC160984) Mus musculus BAC clone RP23-260C12 from chromosom... 38 6.8 3
(CU856175) H.numata DNA sequence from clone AEHN-46M23. 40 7.0 3
(AC117075) Dictyostelium discoideum chromosome 2 map 5201047... 34 7.5 13
(AC116305) Dictyostelium discoideum chromosome 2 map 1005175... 32 8.0 13
(EU081845) Lactococcus phage 1706, complete genome. 44 8.9 3
(AC225329) Solanum lycopersicum chromosome 9 clone C09SLe007... 38 8.9 5
(AC007767) Sequence of BAC F5D14 from Arabidopsis thaliana c... 34 9.1 7
(EJ485181) 1095403495468 Global-Ocean-Sampling_GS-28-01-01-1... 32 9.3 2
(AC176765) Strongylocentrotus purpuratus clone R3-3097O8, WO... 32 9.8 8

>(AU061078) Dictyostelium discoideum slug cDNA, clone SLC858.
Length = 637

Score = 1209 bits (610), Expect = 0.0
Identities = 614/616 (99%)
Strand = Plus / Plus


Query: 22 tatttaggaatacccattttattttaggaaatttagtttgcatgatatttcattaaaatg 81
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 22 tatttaggaatacccattttattttaggaaatttagtttgcatgatatttcattaaaatg 81


Query: 82 ggatacaaagaacaacaaaacccagatgcagtggatcgtttggatttagcatatagggat 141
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 82 ggatacaaagaacaacaaaacccagatgcagtggatcgtttggatttagcatatagggat 141


Query: 142 atcattgaaattaacccacaaattgttgacagatttggaccatatgtaaaagaattagat 201
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 142 atcattgaaattaacccacaaattgttgacagatttggaccatatgtaaaagaattagat 201


Query: 202 ttatcaaataataatcttgaaaaggatttaacaatattagaaggatttaaaagattaaca 261
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 202 ttatcaaataataatcttgaaaaggatttaacaatattagaaggatttaaaagattaaca 261


Query: 262 acattagttttagataataatagaataacacatcatataaaattcccattattaacacaa 321
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 acattagttttagataataatagaataacacatcatataaaattcccattattaacacaa 321


Query: 322 ttacatacattatggataaatagtaatcaaattagtaatcttagtgtatttgttgataga 381
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 ttacatacattatggataaatagtaatcaaattagtaatcttagtgtatttgttgataga 381


Query: 382 gtttgtgaatcatttccaaatattcgtacattctcaatgttaaagaatgaagcatgtcca 441
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 gtttgtgaatcatttccaaatattcgtacattctcaatgttaaagaatgaagcatgtcca 441


Query: 442 aactttttcaatggtcattcattgagagantataaagattatagattatatattatntca 501
||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||
Sbjct: 442 aactttttcaatggtcattcattgagagattataaagattatagattatatattatctca 501


Query: 502 agattaaaatatgtacagatattagattcaacaccagtaacaccagaggaaagagtcgat 561
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 502 agattaaaatatgtacagatattagattcaacaccagtaacaccagaggaaagagtcgat 561


Query: 562 gcaattaaactatatggtaatttcaatactgtcaatcaatcacttgcaaattcaacacca 621
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 562 gcaattaaactatatggtaatttcaatactgtcaatcaatcacttgcaaattcaacacca 621


Query: 622 aaaccaacattagcac 637
||||||||||||||||
Sbjct: 622 aaaccaacattagcac 637

Lambda K H
1.37 0.711 1.31

Matrix: blastn matrix:1 -3
Number of Sequences: 92845959
Number of Hits to DB: 1,379,918,966
Number of extensions: 87240595
Number of successful extensions: 8073386
Number of sequences better than 10.0: 37
Length of query: 1466
Length of database: 95,242,211,685
Length adjustment: 24
Effective length of query: 1442
Effective length of database: 97,308,875,965
Effective search space: 140319399141530
Effective search space used: 140319399141530
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)

protein update 2009. 7.12
Homology vs Protein
Query= Contig-U14684-1 (Contig-U14684-1Q) /CSM_Contig/Contig-U14684-1Q.Seq.d
(1466 letters)

Database: nrp_B
3,236,559 sequences; 1,051,180,864 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value

BT049021_1(BT049021|pid:none) Salmo salar clone ssal-rgb2-571-16... 130 2e-28
DQ440298_1(DQ440298|pid:none) Aedes aegypti clone AET-3769 U2-as... 97 2e-18
(Q9D9B4) RecName: Full=Leucine-rich repeat-containing protein C1... 92 6e-17
AK153491_1(AK153491|pid:none) Mus musculus bone marrow macrophag... 88 9e-16
BC095822_1(BC095822|pid:none) Danio rerio c10orf11 homolog (H. s... 84 1e-14
AK012226_1(AK012226|pid:none) Mus musculus 11 days embryo whole ... 77 2e-12
BT081445_1(BT081445|pid:none) Rana catesbeiana clone rcat-evr-53... 74 1e-11
AE014297_2363(AE014297|pid:none) Drosophila melanogaster chromos... 73 3e-11
DQ207862_1(DQ207862|pid:none) Solanum tuberosum clone 081D11 unk... 66 4e-09
AE014297_4204(AE014297|pid:none) Drosophila melanogaster chromos... 65 6e-09
(A6NJI9) RecName: Full=Leucine-rich repeat-containing protein EN... 51 9e-05
FJ025009_2(FJ025009|pid:none) Listeria monocytogenes strain NRRL... 49 5e-04
FJ024980_2(FJ024980|pid:none) Listeria monocytogenes strain NRRL... 47 0.002
CP000448_1327(CP000448|pid:none) Syntrophomonas wolfei subsp. wo... 46 0.003
FJ024999_2(FJ024999|pid:none) Listeria monocytogenes strain NRRL... 46 0.004
CU928180_161(CU928180|pid:none) Kluyveromyces thermotolerans str... 45 0.005
FJ024968_2(FJ024968|pid:none) Listeria monocytogenes strain NRRL... 45 0.005
DQ302516_1(DQ302516|pid:none) Listeria monocytogenes strain FSLF... 45 0.005
AC147499_5(AC147499|pid:none) Medicago truncatula clone mth2-22h... 45 0.005
DQ844377_2(DQ844377|pid:none) Listeria monocytogenes strain NRRL... 45 0.007
AF121040_1(AF121040|pid:none) Listeria monocytogenes strain 122 ... 45 0.007
FJ024992_2(FJ024992|pid:none) Listeria monocytogenes strain NRRL... 45 0.007
AK049695_1(AK049695|pid:none) Mus musculus 12 days embryo spinal... 45 0.007
DQ843899_1(DQ843899|pid:none) Listeria monocytogenes strain NRRL... 45 0.007
DQ302493_1(DQ302493|pid:none) Listeria monocytogenes strain FSLF... 45 0.007
DQ347788_1(DQ347788|pid:none) Listeria monocytogenes strain FSLF... 45 0.007
DQ844406_2(DQ844406|pid:none) Listeria monocytogenes strain NRRL... 45 0.007
FJ025004_2(FJ025004|pid:none) Listeria monocytogenes strain NRRL... 45 0.007
FJ024997_2(FJ024997|pid:none) Listeria monocytogenes strain NRRL... 45 0.007
FJ025002_2(FJ025002|pid:none) Listeria monocytogenes strain NRRL... 45 0.007
FJ024978_2(FJ024978|pid:none) Listeria monocytogenes strain NRRL... 45 0.007
FJ025012_2(FJ025012|pid:none) Listeria monocytogenes strain NRRL... 45 0.007
FJ024967_2(FJ024967|pid:none) Listeria monocytogenes strain NRRL... 45 0.007
FJ024976_2(FJ024976|pid:none) Listeria monocytogenes strain NRRL... 45 0.007
DQ844403_2(DQ844403|pid:none) Listeria monocytogenes strain NRRL... 45 0.007
DQ843886_1(DQ843886|pid:none) Listeria monocytogenes strain NRRL... 45 0.007
FJ025005_2(FJ025005|pid:none) Listeria monocytogenes strain NRRL... 45 0.007
FJ025008_2(FJ025008|pid:none) Listeria monocytogenes strain NRRL... 45 0.007
FJ024973_2(FJ024973|pid:none) Listeria monocytogenes strain NRRL... 45 0.007
FJ024977_2(FJ024977|pid:none) Listeria monocytogenes strain NRRL... 45 0.007
AF121041_1(AF121041|pid:none) Listeria monocytogenes strain 123 ... 45 0.007
FJ024984_2(FJ024984|pid:none) Listeria monocytogenes strain NRRL... 45 0.007
FJ024966_2(FJ024966|pid:none) Listeria monocytogenes strain NRRL... 45 0.007
FJ025007_2(FJ025007|pid:none) Listeria monocytogenes strain NRRL... 45 0.007
(Q9D5E4) RecName: Full=Leucine-rich repeat-containing protein 48... 45 0.007
FJ024991_2(FJ024991|pid:none) Listeria monocytogenes strain NRRL... 45 0.007
AJ004824_1(AJ004824|pid:none) Salmo salar mRNA for U2 snRNP-spec... 45 0.009
AJ004823_1(AJ004823|pid:none) Salmo salar gene for U2 snRNP-spec... 45 0.009
DQ347784_1(DQ347784|pid:none) Listeria monocytogenes strain FSLR... 45 0.009
CP001175_2165(CP001175|pid:none) Listeria monocytogenes HCC23, c... 45 0.009
DQ132797_1(DQ132797|pid:none) Listeria monocytogenes strain H4 I... 45 0.009
AL844509_681(AL844509|pid:none) Plasmodium falciparum 3D7 chromo... 45 0.009
U25451_1(U25451|pid:none) Listeria monocytogenes F4233 internali... 45 0.009
FJ025003_2(FJ025003|pid:none) Listeria monocytogenes strain NRRL... 45 0.009
FJ025011_2(FJ025011|pid:none) Listeria monocytogenes strain NRRL... 45 0.009
DQ347780_1(DQ347780|pid:none) Listeria monocytogenes strain FSLJ... 45 0.009
BT081328_1(BT081328|pid:none) Caligus clemensi clone ccle-evs-50... 45 0.009
DQ151186_1(DQ151186|pid:none) Petromyzon marinus clone B.H8 vari... 45 0.009
DQ302514_1(DQ302514|pid:none) Listeria monocytogenes strain FSLN... 44 0.011
AL596090_9(AL596090|pid:none) Mouse DNA sequence from clone RP23... 44 0.011
AK228123_1(AK228123|pid:none) Arabidopsis thaliana mRNA for hypo... 44 0.011
FN357426_21(FN357426|pid:none) Schistosoma mansoni genome sequen... 44 0.011
(Q5RBD9) RecName: Full=Tubulin-specific chaperone E; AltName: Fu... 44 0.011
FJ024990_2(FJ024990|pid:none) Listeria monocytogenes strain NRRL... 44 0.015
GN103037_1(GN103037|pid:none) Sequence 7818 from Patent WO200903... 44 0.015
FJ024975_2(FJ024975|pid:none) Listeria monocytogenes strain NRRL... 44 0.015
FJ024970_2(FJ024970|pid:none) Listeria monocytogenes strain NRRL... 44 0.015
AM502242_69(AM502242|pid:none) Leishmania infantum chromosome 24. 44 0.020
EU408877_1(EU408877|pid:none) Listeria monocytogenes isolate VIM... 44 0.020
M67471_3(M67471|pid:none) Listeria monocytogenes internalin (inl... 44 0.020
AJ720043_1(AJ720043|pid:none) Gallus gallus mRNA for hypothetica... 44 0.020
DQ302502_1(DQ302502|pid:none) Listeria monocytogenes strain FSLN... 44 0.020
AM494961_104(AM494961|pid:none) Leishmania braziliensis chromoso... 44 0.020
AF121025_1(AF121025|pid:none) Listeria monocytogenes strain 83 i... 44 0.020
EF056196_1(EF056196|pid:none) Listeria monocytogenes strain VIMV... 44 0.020
DQ843878_1(DQ843878|pid:none) Listeria monocytogenes strain NRRL... 44 0.020
DQ302486_1(DQ302486|pid:none) Listeria monocytogenes strain FSLF... 44 0.020
DQ302504_1(DQ302504|pid:none) Listeria monocytogenes strain FSLN... 44 0.020
AF121032_1(AF121032|pid:none) Listeria monocytogenes strain 524 ... 44 0.020
AF121024_1(AF121024|pid:none) Listeria monocytogenes strain 77 i... 44 0.020
(P25147) RecName: Full=Internalin B; Flags: Precursor; &AC1129(... 44 0.020
(A0JM56) RecName: Full=Leucine-rich repeat-containing protein 9; 44 0.020
DQ347768_1(DQ347768|pid:none) Listeria monocytogenes strain FSLF... 44 0.020
DQ843881_1(DQ843881|pid:none) Listeria monocytogenes strain NRRL... 43 0.025
DQ302483_1(DQ302483|pid:none) Listeria monocytogenes strain FSLE... 43 0.025
AM433292_1(AM433292|pid:none) Vitis vinifera contig VV78X005567.... 43 0.025
AE013599_2241(AE013599|pid:none) Drosophila melanogaster chromos... 43 0.033
EF056203_1(EF056203|pid:none) Listeria monocytogenes strain VIMV... 43 0.033
EU408883_1(EU408883|pid:none) Listeria monocytogenes isolate VIM... 43 0.033
EU408868_1(EU408868|pid:none) Listeria monocytogenes isolate VIM... 43 0.033
U56961_4(U56961|pid:none) Caenorhabditis elegans cosmid T19D7, c... 43 0.033
(P24014) RecName: Full=Protein slit; Short=dSlit; Conta... 43 0.033
EU408885_1(EU408885|pid:none) Listeria monocytogenes isolate VIM... 43 0.033
EU408886_1(EU408886|pid:none) Listeria monocytogenes isolate VIM... 43 0.033
EF056206_1(EF056206|pid:none) Listeria monocytogenes strain VIMV... 43 0.033
(Q54XI9) RecName: Full=Probable inactive serine/threonine-protei... 43 0.033
AJ004808_1(AJ004808|pid:none) Listeria ivanovii i-inlB, i-inlJ, ... 42 0.043
AE014296_805(AE014296|pid:none) Drosophila melanogaster chromoso... 42 0.043
CP000581_140(CP000581|pid:none) Ostreococcus lucimarinus CCE9901... 42 0.043
AE014296_804(AE014296|pid:none) Drosophila melanogaster chromoso... 42 0.043
CP001332_134(CP001332|pid:none) Micromonas sp. RCC299 chromosome... 42 0.043
BC155656_1(BC155656|pid:none) Danio rerio leucine rich repeat ne... 42 0.057
DQ844356_2(DQ844356|pid:none) Listeria monocytogenes strain NRRL... 42 0.057
DQ302484_1(DQ302484|pid:none) Listeria monocytogenes strain FSLF... 42 0.057
DQ843854_1(DQ843854|pid:none) Listeria monocytogenes strain NRRL... 42 0.057
FJ024988_1(FJ024988|pid:none) Listeria monocytogenes strain NRRL... 42 0.057
DQ844358_2(DQ844358|pid:none) Listeria monocytogenes strain NRRL... 42 0.057
DQ843885_1(DQ843885|pid:none) Listeria monocytogenes strain NRRL... 42 0.057
DQ302487_1(DQ302487|pid:none) Listeria monocytogenes strain FSLF... 42 0.057
DQ302496_1(DQ302496|pid:none) Listeria monocytogenes strain FSLF... 42 0.057
DQ844404_2(DQ844404|pid:none) Listeria monocytogenes strain NRRL... 42 0.057
CP000589_130(CP000589|pid:none) Ostreococcus lucimarinus CCE9901... 42 0.057
DQ843851_1(DQ843851|pid:none) Listeria monocytogenes strain NRRL... 42 0.057
DQ302488_1(DQ302488|pid:none) Listeria monocytogenes strain FSLF... 42 0.057
DQ844399_2(DQ844399|pid:none) Listeria monocytogenes strain NRRL... 42 0.057
DQ844359_2(DQ844359|pid:none) Listeria monocytogenes strain NRRL... 42 0.057
DQ844362_2(DQ844362|pid:none) Listeria monocytogenes strain NRRL... 42 0.057
DQ844366_2(DQ844366|pid:none) Listeria monocytogenes strain NRRL... 42 0.057
DQ844349_2(DQ844349|pid:none) Listeria monocytogenes strain NRRL... 42 0.057
DQ844376_2(DQ844376|pid:none) Listeria monocytogenes strain NRRL... 42 0.057
DQ302512_1(DQ302512|pid:none) Listeria monocytogenes strain FSLS... 42 0.057
DQ302480_1(DQ302480|pid:none) Listeria monocytogenes strain FSLE... 42 0.057
DQ843884_1(DQ843884|pid:none) Listeria monocytogenes strain NRRL... 42 0.057
DQ843856_1(DQ843856|pid:none) Listeria monocytogenes strain NRRL... 42 0.057
AF497155_1(AF497155|pid:none) Listeria monocytogenes strain FSLJ... 42 0.074
AB276429_1(AB276429|pid:none) Listeria monocytogenes inlA for in... 42 0.074
DQ843823_1(DQ843823|pid:none) Listeria monocytogenes strain NRRL... 42 0.074
FJ617527_1(FJ617527|pid:none) Listeria monocytogenes strain CSUF... 42 0.074
AY436594_1(AY436594|pid:none) Listeria monocytogenes isolate F69... 42 0.074
DQ347766_1(DQ347766|pid:none) Listeria monocytogenes strain FSLF... 42 0.074
AF497163_1(AF497163|pid:none) Listeria monocytogenes strain FSLj... 42 0.074
AB276406_1(AB276406|pid:none) Listeria monocytogenes inlA for in... 42 0.074
AY228472_1(AY228472|pid:none) Listeria monocytogenes strain F621... 42 0.074
FJ024968_1(FJ024968|pid:none) Listeria monocytogenes strain NRRL... 42 0.074
EF558942_1(EF558942|pid:none) Listeria monocytogenes isolate R9 ... 42 0.074
EF445918_1(EF445918|pid:none) Listeria monocytogenes clone n4290... 42 0.074
(Q723K6) RecName: Full=Internalin-A; Flags: Precursor; &AE01726... 42 0.074
EF558940_1(EF558940|pid:none) Listeria monocytogenes isolate R7 ... 42 0.074
DQ844405_1(DQ844405|pid:none) Listeria monocytogenes strain NRRL... 42 0.074
(Q4R6X9) RecName: Full=Leucine-rich repeat-containing protein 48... 42 0.074
AB276381_1(AB276381|pid:none) Listeria monocytogenes inlA for in... 42 0.074
FJ024986_1(FJ024986|pid:none) Listeria monocytogenes strain NRRL... 42 0.074
DQ843801_1(DQ843801|pid:none) Listeria monocytogenes strain NRRL... 42 0.074
DQ347771_1(DQ347771|pid:none) Listeria monocytogenes strain FSLJ... 42 0.074
EF558935_1(EF558935|pid:none) Listeria monocytogenes isolate R2 ... 42 0.074
AE014185_317(AE014185|pid:none) Plasmodium falciparum 3D7 chromo... 42 0.074
FM178788_1(FM178788|pid:none) Listeria monocytogenes inlA gene f... 42 0.074
FJ024991_1(FJ024991|pid:none) Listeria monocytogenes strain NRRL... 42 0.074
AY898265_1(AY898265|pid:none) Plasmodium falciparum leucine-rich... 42 0.074
AF497166_1(AF497166|pid:none) Listeria monocytogenes strain FSLW... 42 0.074
FJ025003_1(FJ025003|pid:none) Listeria monocytogenes strain NRRL... 42 0.074
EF445913_1(EF445913|pid:none) Listeria monocytogenes clone f2637... 42 0.074
FJ024979_1(FJ024979|pid:none) Listeria monocytogenes strain NRRL... 42 0.074
U25445_1(U25445|pid:none) Listeria monocytogenes F2365 internali... 42 0.074
DQ844359_1(DQ844359|pid:none) Listeria monocytogenes strain NRRL... 42 0.074
AB276428_1(AB276428|pid:none) Listeria monocytogenes inlA for in... 42 0.074
AF497164_1(AF497164|pid:none) Listeria monocytogenes strain FSLC... 42 0.074
DQ844350_1(DQ844350|pid:none) Listeria monocytogenes strain NRRL... 42 0.074
EF445928_1(EF445928|pid:none) Listeria monocytogenes clone f2663... 42 0.074
EF445930_1(EF445930|pid:none) Listeria monocytogenes clone s4295... 42 0.074
FJ617534_1(FJ617534|pid:none) Listeria monocytogenes strain CSUF... 42 0.074
DQ844351_1(DQ844351|pid:none) Listeria monocytogenes strain NRRL... 42 0.074
FJ024993_1(FJ024993|pid:none) Listeria monocytogenes strain NRRL... 42 0.074
DQ844404_1(DQ844404|pid:none) Listeria monocytogenes strain NRRL... 42 0.074
FJ024980_1(FJ024980|pid:none) Listeria monocytogenes strain NRRL... 42 0.074
EF445938_1(EF445938|pid:none) Listeria monocytogenes clone f2695... 42 0.074
DQ843792_1(DQ843792|pid:none) Listeria monocytogenes strain NRRL... 42 0.074
FJ025012_1(FJ025012|pid:none) Listeria monocytogenes strain NRRL... 42 0.074
DQ347777_1(DQ347777|pid:none) Listeria monocytogenes strain FSLR... 42 0.074
DQ843822_1(DQ843822|pid:none) Listeria monocytogenes strain NRRL... 42 0.074
FJ024971_1(FJ024971|pid:none) Listeria monocytogenes strain NRRL... 42 0.074
(P25146) RecName: Full=Internalin-A; Flags: Precursor; &AB1129(... 42 0.074
FJ024998_1(FJ024998|pid:none) Listeria monocytogenes strain NRRL... 42 0.074
DQ844375_1(DQ844375|pid:none) Listeria monocytogenes strain NRRL... 42 0.074
AY436593_1(AY436593|pid:none) Listeria monocytogenes isolate J01... 42 0.074
EF445931_1(EF445931|pid:none) Listeria monocytogenes clone s4304... 42 0.074
GN103035_1(GN103035|pid:none) Sequence 7816 from Patent WO200903... 42 0.074
DQ347776_1(DQ347776|pid:none) Listeria monocytogenes strain FSLR... 42 0.074
FJ025000_1(FJ025000|pid:none) Listeria monocytogenes strain NRRL... 42 0.074
DQ347769_1(DQ347769|pid:none) Listeria monocytogenes strain FSLF... 42 0.074
BT043499_1(BT043499|pid:none) Salmo salar clone HM4_0280 protein... 42 0.074
FJ024994_1(FJ024994|pid:none) Listeria monocytogenes strain NRRL... 42 0.074
DQ844403_1(DQ844403|pid:none) Listeria monocytogenes strain NRRL... 42 0.074
DQ844407_1(DQ844407|pid:none) Listeria monocytogenes strain NRRL... 42 0.074
EF445917_1(EF445917|pid:none) Listeria monocytogenes clone e1123... 42 0.074
AK340639_1(AK340639|pid:none) Acyrthosiphon pisum ACYPI000509 mR... 42 0.074
FJ024976_1(FJ024976|pid:none) Listeria monocytogenes strain NRRL... 42 0.074
DQ347775_1(DQ347775|pid:none) Listeria monocytogenes strain FSLM... 42 0.074
AB276379_1(AB276379|pid:none) Listeria monocytogenes inlA for in... 42 0.074
DQ132795_1(DQ132795|pid:none) Listeria monocytogenes strain 1040... 42 0.074
FJ024983_1(FJ024983|pid:none) Listeria monocytogenes strain NRRL... 42 0.074
DQ843837_1(DQ843837|pid:none) Listeria monocytogenes strain NRRL... 42 0.074
DQ844376_1(DQ844376|pid:none) Listeria monocytogenes strain NRRL... 42 0.074
FJ024969_1(FJ024969|pid:none) Listeria monocytogenes strain NRRL... 42 0.074
EF445906_1(EF445906|pid:none) Listeria monocytogenes clone f2666... 42 0.074
DQ843819_1(DQ843819|pid:none) Listeria monocytogenes strain NRRL... 42 0.074
FJ495194_1(FJ495194|pid:none) Listeria monocytogenes strain 4140... 42 0.074
EF445901_1(EF445901|pid:none) Listeria monocytogenes clone e1125... 42 0.074
FM179779_1(FM179779|pid:none) Listeria monocytogenes inlA gene f... 42 0.074
CP001287_507(CP001287|pid:none) Cyanothece sp. PCC 8801, complet... 42 0.074
BC103420_1(BC103420|pid:none) Bos taurus leucine rich repeat con... 42 0.074
EF445920_1(EF445920|pid:none) Listeria monocytogenes clone n4293... 42 0.074
FJ024966_1(FJ024966|pid:none) Listeria monocytogenes strain NRRL... 42 0.074
DQ843789_1(DQ843789|pid:none) Listeria monocytogenes strain NRRL... 42 0.074
FJ024965_1(FJ024965|pid:none) Listeria monocytogenes strain NRRL... 42 0.074
DQ844401_1(DQ844401|pid:none) Listeria monocytogenes strain NRRL... 42 0.074
(Q5XI54) RecName: Full=Leucine-rich repeat-containing protein 48... 42 0.074
DQ844408_1(DQ844408|pid:none) Listeria monocytogenes strain NRRL... 42 0.074
DQ844349_1(DQ844349|pid:none) Listeria monocytogenes strain NRRL... 42 0.074
FJ025010_1(FJ025010|pid:none) Listeria monocytogenes strain NRRL... 42 0.074
EF409978_1(EF409978|pid:none) Listeria monocytogenes strain LI05... 42 0.074
DQ347774_1(DQ347774|pid:none) Listeria monocytogenes strain FSLJ... 41 0.097
DQ844366_1(DQ844366|pid:none) Listeria monocytogenes strain NRRL... 41 0.097
DQ843791_1(DQ843791|pid:none) Listeria monocytogenes strain NRRL... 41 0.097
EF056172_1(EF056172|pid:none) Listeria monocytogenes strain VIMH... 41 0.097
EU408871_1(EU408871|pid:none) Listeria monocytogenes isolate VIM... 41 0.097
AB276421_1(AB276421|pid:none) Listeria monocytogenes inlA for in... 41 0.097
DQ302597_1(DQ302597|pid:none) Listeria monocytogenes strain FSLE... 41 0.13
DQ302626_1(DQ302626|pid:none) Listeria monocytogenes strain FSLS... 41 0.13
AF126540_1(AF126540|pid:none) Drosophila melanogaster slit prote... 41 0.13
A36665(A36665;A31640;S13523) slit protein 1 precursor - fruit fl... 41 0.13
CP000001_1202(CP000001|pid:none) Bacillus cereus E33L, complete ... 41 0.13
U77368_2(U77368|pid:none) Listeria monocytogenes internalin (inl... 41 0.13
CP001357_1154(CP001357|pid:none) Brachyspira hyodysenteriae WA1,... 40 0.17
EF056175_1(EF056175|pid:none) Listeria monocytogenes strain VIMV... 40 0.17
DQ302625_1(DQ302625|pid:none) Listeria monocytogenes strain FSLS... 40 0.17
AJ888460_1(AJ888460|pid:none) Listeria ivanovii i-inlF gene, i-i... 40 0.17
DQ449831_1(DQ449831|pid:none) Listeria monocytogenes isolate e11... 40 0.17
EU126152_1(EU126152|pid:none) Danio rerio leucine-rich repeats a... 40 0.17
Y14181_1(Y14181|pid:none) Listeria ivanovii i-inlF gene. 40 0.17
AB168408_1(AB168408|pid:none) Macaca fascicularis testis cDNA cl... 40 0.17
FM242711_328(FM242711|pid:none) Listeria monocytogenes Clip81459... 40 0.17
DQ302610_1(DQ302610|pid:none) Listeria monocytogenes strain FSLF... 40 0.22
(Q723X5) RecName: Full=Internalin-I; Flags: Precursor; &AE01726... 40 0.22
AE014187_303(AE014187|pid:none) Plasmodium falciparum 3D7 chromo... 40 0.22
(Q7ZV84) RecName: Full=Leucine-rich repeat-containing protein 50; 40 0.22
BC045963_1(BC045963|pid:none) Danio rerio leucine rich repeat co... 40 0.22
CP000407_1569(CP000407|pid:none) Streptococcus suis 05ZYH33, com... 40 0.28
BC013777_1(BC013777|pid:none) Mus musculus small nuclear ribonuc... 40 0.28
EU408789_1(EU408789|pid:none) Listeria monocytogenes isolate VIM... 40 0.28
BC146154_1(BC146154|pid:none) Bos taurus small nuclear ribonucle... 40 0.28
AF230356_1(AF230356|pid:none) Mus musculus U2 small nuclear ribo... 40 0.28
AF497167_1(AF497167|pid:none) Listeria monocytogenes strain FSLX... 40 0.28
(Q8NEP3) RecName: Full=Leucine-rich repeat-containing protein 50; 40 0.28
CP000382_566(CP000382|pid:none) Clostridium novyi NT, complete g... 40 0.28
CP000408_1584(CP000408|pid:none) Streptococcus suis 98HAH33, com... 40 0.28
AL833328_1(AL833328|pid:none) Homo sapiens mRNA; cDNA DKFZp686E1... 40 0.28
EU583475_1(EU583475|pid:none) Ovis aries SNPRA1 mRNA, complete c... 40 0.28
FJ024984_1(FJ024984|pid:none) Listeria monocytogenes strain NRRL... 40 0.28
(P57784) RecName: Full=U2 small nuclear ribonucleoprotein A'; ... 40 0.28
AE017194_1437(AE017194|pid:none) Bacillus cereus ATCC 10987, com... 39 0.37
CP001283_1330(CP001283|pid:none) Bacillus cereus AH820, complete... 39 0.37
AM392530_1(AM392530|pid:none) Synthetic construct Homo sapiens c... 39 0.37
AK291717_1(AK291717|pid:none) Homo sapiens cDNA FLJ77567 complet... 39 0.37
EU408831_1(EU408831|pid:none) Listeria monocytogenes isolate VIM... 39 0.37
EF094731_1(EF094731|pid:none) Petromyzon marinus isolate PmVLRA.... 39 0.37
EU408810_1(EU408810|pid:none) Listeria monocytogenes isolate VIM... 39 0.37
AK241152_1(AK241152|pid:none) Oryza sativa Japonica Group cDNA, ... 39 0.37
AE017355_1195(AE017355|pid:none) Bacillus thuringiensis serovar ... 39 0.37
CP000485_1123(CP000485|pid:none) Bacillus thuringiensis str. Al ... 39 0.37
AB040930_1(AB040930|pid:none) Homo sapiens mRNA for KIAA1497 pro... 39 0.37
EU408808_1(EU408808|pid:none) Listeria monocytogenes isolate VIM... 39 0.37
EU408804_1(EU408804|pid:none) Listeria monocytogenes isolate VIM... 39 0.37
AK223070_1(AK223070|pid:none) Homo sapiens mRNA for small nuclea... 39 0.37
CP001215_3147(CP001215|pid:none) Bacillus anthracis str. CDC 684... 39 0.37
AE001437_3227(AE001437|pid:none) Clostridium acetobutylicum ATCC... 39 0.37
AE1515(AE1515) internalin like protein (LPXTG motif) [imported] ... 39 0.37
AE016879_1236(AE016879|pid:none) Bacillus anthracis str. Ames, c... 39 0.37
AK223110_1(AK223110|pid:none) Homo sapiens mRNA for small nuclea... 39 0.37
EU408851_1(EU408851|pid:none) Listeria monocytogenes isolate VIM... 39 0.37
CP001177_1330(CP001177|pid:none) Bacillus cereus AH187, complete... 39 0.37
(Q6AYH9) RecName: Full=Leucine-rich repeat-containing protein 50... 39 0.37
DQ347812_1(DQ347812|pid:none) Listeria monocytogenes strain FSLF... 39 0.48
AY937243_1(AY937243|pid:none) Apis mellifera Toll-like receptor ... 39 0.48
AM431505_2(AM431505|pid:none) Vitis vinifera contig VV78X064503.... 39 0.48
AE015927_407(AE015927|pid:none) Clostridium tetani E88, complete... 39 0.48
DQ347813_1(DQ347813|pid:none) Listeria monocytogenes strain FSLJ... 39 0.48
DQ868125_1(DQ868125|pid:none) Drosophila affinis Toll-7 (Toll-7)... 39 0.63
T15864(T15864)hypothetical protein C56E6.6 - Caenorhabditis eleg... 39 0.63
AK128037_1(AK128037|pid:none) Homo sapiens cDNA FLJ46156 fis, cl... 39 0.63
AE1479(AE1479) probable cell surface protein (LPXTG motif) [impo... 39 0.63
CP000260_1179(CP000260|pid:none) Streptococcus pyogenes MGAS1027... 39 0.63
AB014462_1(AB014462|pid:none) Xenopus laevis XNLRR-1 mRNA, compl... 39 0.63
DQ868132_1(DQ868132|pid:none) Drosophila miranda strain MA28 chr... 39 0.63
CP000903_464(CP000903|pid:none) Bacillus weihenstephanensis KBAB... 39 0.63
DQ067619_1(DQ067619|pid:none) Fusarium proliferatum adenylate cy... 39 0.63
(Q6ZRR7) RecName: Full=Leucine-rich repeat-containing protein 9; 39 0.63
BC125720_1(BC125720|pid:none) Xenopus tropicalis hypothetical pr... 39 0.63
(A0N0X6) RecName: Full=Leucine-rich repeat neuronal protein 1; A... 39 0.63
DQ868133_1(DQ868133|pid:none) Drosophila miranda strain MA32 chr... 39 0.63
DQ868128_1(DQ868128|pid:none) Drosophila miranda strain 0101.4 c... 39 0.63
DQ868126_1(DQ868126|pid:none) Drosophila pseudoobscura chromosom... 39 0.63
AK101441_1(AK101441|pid:none) Oryza sativa Japonica Group cDNA c... 39 0.63
CP000261_1171(CP000261|pid:none) Streptococcus pyogenes MGAS2096... 38 0.82
DQ302632_1(DQ302632|pid:none) Listeria monocytogenes strain FSLS... 38 0.82
EU836300_1(EU836300|pid:none) Peromyscus aztecus hylocetes isola... 38 0.82
CP000259_1152(CP000259|pid:none) Streptococcus pyogenes MGAS9429... 38 0.82
BT021726_1(BT021726|pid:none) Bos taurus hypothetical protein FL... 38 0.82
CP000829_1320(CP000829|pid:none) Streptococcus pyogenes NZ131, c... 38 0.82
(Q6DIQ3) RecName: Full=Protein phosphatase 1 regulatory subunit ... 38 0.82
AE017262_370(AE017262|pid:none) Listeria monocytogenes str. 4b F... 38 0.82
AE009949_1132(AE009949|pid:none) Streptococcus pyogenes MGAS8232... 38 0.82
CP000259_1533(CP000259|pid:none) Streptococcus pyogenes MGAS9429... 38 0.82
FM242711_350(FM242711|pid:none) Listeria monocytogenes Clip81459... 38 0.82
BC118442_1(BC118442|pid:none) Bos taurus leucine rich repeat con... 38 0.82
EF409980_1(EF409980|pid:none) Listeria monocytogenes strain LI05... 38 0.82
BX470240_1(BX470240|pid:none) Zebrafish DNA sequence from clone ... 38 0.82
AE014074_1035(AE014074|pid:none) Streptococcus pyogenes MGAS315,... 38 0.82
AE004092_1043(AE004092|pid:none) Streptococcus pyogenes M1 GAS, ... 38 0.82
DQ302561_1(DQ302561|pid:none) Listeria monocytogenes strain FSLE... 38 0.82
CP000003_1522(CP000003|pid:none) Streptococcus pyogenes MGAS1039... 38 0.82
CP000056_1515(CP000056|pid:none) Streptococcus pyogenes MGAS6180... 38 0.82
(Q32Q07) RecName: Full=Leucine-rich repeat neuronal protein 1; A... 38 0.82
AK226790_1(AK226790|pid:none) Arabidopsis thaliana mRNA for prot... 38 1.1
CU928181_279(CU928181|pid:none) Zygosaccharomyces rouxii strain ... 38 1.1
AK047468_1(AK047468|pid:none) Mus musculus 10 days neonate cereb... 38 1.1
AF381545_1(AF381545|pid:none) Homo sapiens membrane glycoprotein... 38 1.1
BC071561_1(BC071561|pid:none) Homo sapiens leucine-rich repeats ... 38 1.1
FM992690_665(FM992690|pid:none) Candida dubliniensis CD36 chromo... 38 1.1
BT045924_1(BT045924|pid:none) Salmo salar clone ssal-rgf-536-316... 38 1.1
CP001037_4503(CP001037|pid:none) Nostoc punctiforme PCC 73102, c... 38 1.1
BC140907_1(BC140907|pid:none) Homo sapiens leucine-rich repeats ... 38 1.1
EU836298_1(EU836298|pid:none) Peromyscus maniculatus bairdii iso... 38 1.1
AB050468_1(AB050468|pid:none) Homo sapiens mRNA for membrane gly... 38 1.1
AC006300_12(AC006300|pid:none) Arabidopsis thaliana chromosome 2... 38 1.1
BT076497_1(BT076497|pid:none) Caligus rogercresseyi clone crog-e... 38 1.1
AJ004825_1(AJ004825|pid:none) Salmo salar mRNA for U2 snRNP-spec... 38 1.1
(B6D5P3) RecName: Full=Leucine-rich repeat-containing protein 50... 38 1.1
AY730707_1(AY730707|pid:none) Homo sapiens leucine-rich repeat p... 38 1.1
AM502242_16(AM502242|pid:none) Leishmania infantum chromosome 24. 38 1.1
(B6D5P1) RecName: Full=Leucine-rich repeat-containing protein 50... 38 1.1
(O74473) RecName: Full=Septation initiation network scaffold pro... 38 1.1
DQ347817_1(DQ347817|pid:none) Listeria monocytogenes strain FSLR... 38 1.1
AL935261_71(AL935261|pid:none) Lactobacillus plantarum strain WC... 38 1.1
AK164849_1(AK164849|pid:none) Mus musculus 15 days embryo head c... 38 1.1
(Q96JA1) RecName: Full=Leucine-rich repeats and immunoglobulin-l... 38 1.1
DQ302581_1(DQ302581|pid:none) Listeria monocytogenes strain FSLN... 37 1.4
DQ302563_1(DQ302563|pid:none) Listeria monocytogenes strain FSLF... 37 1.4
AJ012385_2(AJ012385|pid:none) Listeria monocytogenes inlF, inlD ... 37 1.4
DQ138914_1(DQ138914|pid:none) Drosophila melanogaster strain Ral... 37 1.4
EU707134_1(EU707134|pid:none) Drosophila melanogaster isolate ML... 37 1.4
AL845366_2(AL845366|pid:none) Zebrafish DNA sequence from clone ... 37 1.4
DQ302560_1(DQ302560|pid:none) Listeria monocytogenes strain FSLE... 37 1.4
DQ302624_1(DQ302624|pid:none) Listeria monocytogenes strain FSLS... 37 1.4
AE015927_406(AE015927|pid:none) Clostridium tetani E88, complete... 37 1.4
DQ302565_1(DQ302565|pid:none) Listeria monocytogenes strain FSLF... 37 1.4
DQ302587_1(DQ302587|pid:none) Listeria monocytogenes strain FSLS... 37 1.4
AE017194_606(AE017194|pid:none) Bacillus cereus ATCC 10987, comp... 37 1.4
AM412317_3113(AM412317|pid:none) Clostridium botulinum A str. AT... 37 1.4
(Q5FVI3) RecName: Full=Leucine-rich repeat-containing protein 57... 37 1.4
CP001083_1873(CP001083|pid:none) Clostridium botulinum Ba4 str. ... 37 1.4
DQ302586_1(DQ302586|pid:none) Listeria monocytogenes strain FSLS... 37 1.4
AH1107(AH1107) internalin H [imported] - Listeria monocytogenes ... 37 1.4
DQ138919_1(DQ138919|pid:none) Drosophila erecta voucher stock #1... 37 1.4
DQ302559_1(DQ302559|pid:none) Listeria monocytogenes strain FSLE... 37 1.4
DQ138917_1(DQ138917|pid:none) Drosophila yakuba strain Tai18 CG8... 37 1.4
DQ302584_1(DQ302584|pid:none) Listeria monocytogenes strain FSLS... 37 1.4
DQ138916_1(DQ138916|pid:none) Drosophila simulans strain Ky-b CG... 37 1.4
DQ302477_1(DQ302477|pid:none) Listeria monocytogenes strain FSLF... 37 1.4
U77368_1(U77368|pid:none) Listeria monocytogenes internalin (inl... 37 1.4
DQ017481_1(DQ017481|pid:none) Plasmodium falciparum leucine-rich... 37 1.4
DQ302573_1(DQ302573|pid:none) Listeria monocytogenes strain FSLF... 37 1.4
AM263198_759(AM263198|pid:none) Listeria welshimeri serovar 6b s... 37 1.8
EF512462_1(EF512462|pid:none) Gallus gallus leucine-rich repeat ... 37 1.8
AL772299_9(AL772299|pid:none) Mouse DNA sequence from clone RP23... 37 1.8
AE016877_462(AE016877|pid:none) Bacillus cereus ATCC 14579, comp... 37 1.8
AK003037_1(AK003037|pid:none) Mus musculus adult male brain cDNA... 37 1.8
AK134971_1(AK134971|pid:none) Mus musculus adult male olfactory ... 37 1.8
DQ138918_1(DQ138918|pid:none) Drosophila yakuba strain T33 CG859... 37 1.8
CU928168_655(CU928168|pid:none) Kluyveromyces thermotolerans str... 37 1.8
CP001323_723(CP001323|pid:none) Micromonas sp. RCC299 chromosome... 37 1.8
DQ347803_1(DQ347803|pid:none) Listeria monocytogenes strain FSLF... 37 1.8
CP000393_2252(CP000393|pid:none) Trichodesmium erythraeum IMS101... 37 1.8
AK012637_1(AK012637|pid:none) Mus musculus 10, 11 days embryo wh... 37 1.8
(Q9D1G5) RecName: Full=Leucine-rich repeat-containing protein 57... 37 1.8
CP000885_1793(CP000885|pid:none) Clostridium phytofermentans ISD... 37 1.8
AE001437_3221(AE001437|pid:none) Clostridium acetobutylicum ATCC... 37 2.4
AY091081_1(AY091081|pid:none) Arabidopsis thaliana putative leuc... 37 2.4
AC002334_21(AC002334|pid:none) Arabidopsis thaliana chromosome 2... 37 2.4
AB027844_1(AB027844|pid:none) Schizosaccharomyces pombe gene for... 37 2.4
EF081372_1(EF081372|pid:none) Triticum aestivum FORL2 mRNA, comp... 37 2.4
DQ347801_1(DQ347801|pid:none) Listeria monocytogenes strain FSLJ... 37 2.4
CP001283_541(CP001283|pid:none) Bacillus cereus AH820, complete ... 37 2.4
AM981304_1(AM981304|pid:none) Ovis aries mRNA for Toll-like rece... 37 2.4
BC139541_1(BC139541|pid:none) Danio rerio vasorin like, mRNA (cD... 37 2.4
FJ708675_1(FJ708675|pid:none) Arabidopsis thaliana leucine-rich ... 37 2.4
AM910993_8(AM910993|pid:none) Plasmodium knowlesi strain H chrom... 37 2.4
AB1497(AB1497) internalin protein, probable peptidoglycan bound ... 36 3.1
AL669839_1(AL669839|pid:none) Mouse DNA sequence from clone RP23... 36 3.1
CP000031_3347(CP000031|pid:none) Ruegeria pomeroyi DSS-3, comple... 36 3.1
FM242711_413(FM242711|pid:none) Listeria monocytogenes Clip81459... 36 3.1
BC167810_1(BC167810|pid:none) Synthetic construct Homo sapiens c... 36 3.1
EF409977_1(EF409977|pid:none) Prunus persica polygalacturonase i... 36 3.1
(Q9Y4C4) RecName: Full=Malignant fibrous histiocytoma-amplified ... 36 3.1
AM451552_1(AM451552|pid:none) Vitis vinifera contig VV78X141848.... 36 3.1
AM778955_126(AM778955|pid:none) Microcystis aeruginosa PCC 7806 ... 36 3.1
FM242711_275(FM242711|pid:none) Listeria monocytogenes Clip81459... 36 3.1
(Q9WVB4) RecName: Full=Slit homolog 3 protein; Short=Sl... 36 3.1
EU117213_1(EU117213|pid:none) Fragaria x ananassa polygalacturon... 36 3.1
T23841(T23841) hypothetical protein M88.6b - Caenorhabditis eleg... 36 3.1
AC140031_16(AC140031|pid:none) Medicago truncatula clone mth2-24... 36 3.1
(O88280) RecName: Full=Slit homolog 3 protein; Short=Sl... 36 3.1
BC150780_1(BC150780|pid:none) Mus musculus slit homolog 3 (Droso... 36 3.1
DQ302601_1(DQ302601|pid:none) Listeria monocytogenes strain FSLF... 36 3.1
AY965606_1(AY965606|pid:none) Eptatretus stoutii clone Es3mVLRB.... 36 3.1
EF094719_1(EF094719|pid:none) Petromyzon marinus isolate PmVLRA.... 36 3.1
Z79598_2(Z79598|pid:none) Caenorhabditis elegans Cosmid C44H4, c... 36 3.1
T23836(T23836) hypothetical protein M88.6a - Caenorhabditis eleg... 36 3.1
CP001186_465(CP001186|pid:none) Bacillus cereus G9842, complete ... 36 3.1
CU468799_1(CU468799|pid:none) Danio rerio cDNA, clone cssl:d0413. 36 3.1
DQ302622_1(DQ302622|pid:none) Listeria monocytogenes strain FSLN... 36 3.1
AY349696_1(AY349696|pid:none) Drosophila simulans strain Sim5 18... 36 4.1
FN376191_2(FN376191|pid:none) Schistosoma mansoni genome sequenc... 36 4.1
(Q54Y32) RecName: Full=MAP kinase phosphatase with leucine-rich ... 36 4.1
EF471283_1(EF471283|pid:none) Oncorhynchus mykiss neuronal leuci... 36 4.1
DQ138942_1(DQ138942|pid:none) Drosophila yakuba strain T33 CG889... 36 4.1
AE014296_806(AE014296|pid:none) Drosophila melanogaster chromoso... 36 4.1
(Q6BT60) RecName: Full=U2 small nuclear ribonucleoprotein A'; ... 36 4.1
AK132349_1(AK132349|pid:none) Mus musculus 15 days embryo head c... 36 4.1
CU468795_1(CU468795|pid:none) Danio rerio cDNA, clone cssl:d0381. 36 4.1
AY903226_1(AY903226|pid:none) Prunus americana polygalacturonase... 36 4.1
(Q3V1N1) RecName: Full=Malignant fibrous histiocytoma-amplified ... 36 4.1
DQ138943_1(DQ138943|pid:none) Drosophila erecta voucher stock #1... 36 4.1
EF678730_1(EF678730|pid:none) Picea sitchensis clone WS0297_D22 ... 36 4.1
AE013599_3151(AE013599|pid:none) Drosophila melanogaster chromos... 36 4.1
AB019228_2(AB019228|pid:none) Arabidopsis thaliana genomic DNA, ... 36 4.1
BC170476_1(BC170476|pid:none) Xenopus laevis slit homolog 2 (Dro... 36 4.1
AY738489_1(AY738489|pid:none) Gemmata sp. Wa1-1 GTP-binding prot... 36 4.1
AY964751_1(AY964751|pid:none) Eptatretus burgeri clone Eb7VLRA.4... 36 4.1
AM494961_50(AM494961|pid:none) Leishmania braziliensis chromosom... 36 4.1
EF094746_1(EF094746|pid:none) Petromyzon marinus isolate PmVLRA.... 36 4.1
L23171_1(L23171|pid:none) Drosophila melanogaster wheeler mRNA, ... 36 4.1
DQ138941_1(DQ138941|pid:none) Drosophila yakuba strain Tai18 CG8... 36 4.1
(Q3UM45) RecName: Full=Protein phosphatase 1 regulatory subunit ... 36 4.1
AK171731_1(AK171731|pid:none) Mus musculus activated spleen cDNA... 36 4.1
AY046070_1(AY046070|pid:none) Xenopus laevis Slit mRNA, complete... 36 4.1
(Q6DHL5) RecName: Full=Leucine-rich repeat-containing protein 57... 36 4.1
EF094766_1(EF094766|pid:none) Petromyzon marinus isolate PmVLRA.... 36 4.1
DQ138940_1(DQ138940|pid:none) Drosophila simulans strain Ky-b CG... 36 4.1
CP001175_2334(CP001175|pid:none) Listeria monocytogenes HCC23, c... 36 4.1
AY964744_1(AY964744|pid:none) Eptatretus burgeri clone Eb7VLRA.3... 35 5.3
DQ121376_15(DQ121376|pid:none) Uncultured bacterium clone YC01G1... 35 5.3
AM293330_1(AM293330|pid:none) Manduca sexta mRNA for leureptin (... 35 5.3
DQ437870_1(DQ437870|pid:none) Toxoplasma gondii leucine-rich rep... 35 5.3
AY964904_1(AY964904|pid:none) Eptatretus stoutii clone Es5VLRA.B... 35 5.3
DQ347818_1(DQ347818|pid:none) Listeria monocytogenes strain FSLJ... 35 5.3
CR940353_258(CR940353|pid:none) Theileria annulata strain Ankara... 35 5.3
AY964747_1(AY964747|pid:none) Eptatretus burgeri clone Eb7VLRA.3... 35 5.3
CP001248_27(CP001248|pid:none) Borrelia afzelii ACA-1 plasmid cp... 35 5.3
AY964752_1(AY964752|pid:none) Eptatretus burgeri clone Eb7VLRA.4... 35 5.3
AB070579_1(AB070579|pid:none) Bombyx mori Bm18w gene for 18 whee... 35 5.3
AB275676_1(AB275676|pid:none) Lethenteron japonicum jVLR gene fo... 35 5.3
EU006644_1(EU006644|pid:none) Bos taurus x Bos indicus isolate 2... 35 5.3
EU006649_1(EU006649|pid:none) Bos indicus isolate 86X Toll-like ... 35 5.3
AM920436_1105(AM920436|pid:none) Penicillium chrysogenum Wiscons... 35 5.3
CP000903_1223(CP000903|pid:none) Bacillus weihenstephanensis KBA... 35 5.3
DQ020574_1(DQ020574|pid:none) Solanum torvum verticillium wilt d... 35 5.3
AF413062_1(AF413062|pid:none) Manduca sexta leureptin mRNA, comp... 35 5.3
EU006648_1(EU006648|pid:none) Bos taurus isolate 80U Toll-like r... 35 5.3
FN357369_80(FN357369|pid:none) Schistosoma mansoni genome sequen... 35 6.9
EU746470_1(EU746470|pid:none) Bos taurus isolate 74 toll-like re... 35 6.9
AM910987_279(AM910987|pid:none) Plasmodium knowlesi strain H chr... 35 6.9
AP009046_78(AP009046|pid:none) Hyphantria cunea nucleopolyhedrov... 35 6.9
AB120627_1(AB120627|pid:none) Populus nigra PnLRK1 mRNA for leuc... 35 6.9
DQ302680_1(DQ302680|pid:none) Listeria monocytogenes strain FSLN... 35 6.9
EU408881_1(EU408881|pid:none) Listeria monocytogenes isolate VIM... 35 6.9
AM473958_2(AM473958|pid:none) Vitis vinifera contig VV78X180524.... 35 6.9
DQ302673_1(DQ302673|pid:none) Listeria monocytogenes strain FSLE... 35 6.9
CR940347_994(CR940347|pid:none) Theileria annulata strain Ankara... 35 6.9
EF094790_1(EF094790|pid:none) Petromyzon marinus isolate PmVLRA.... 35 6.9
DQ302682_1(DQ302682|pid:none) Listeria monocytogenes strain FSLS... 35 6.9
AE016877_1204(AE016877|pid:none) Bacillus cereus ATCC 14579, com... 35 6.9
AM425879_2(AM425879|pid:none) Vitis vinifera contig VV78X020791.... 35 6.9
DQ302681_1(DQ302681|pid:none) Listeria monocytogenes strain FSLS... 35 6.9
DQ302691_1(DQ302691|pid:none) Listeria monocytogenes strain FSLF... 35 6.9
EU746474_1(EU746474|pid:none) Bos indicus isolate 86 toll-like r... 35 6.9
CP001083_2070(CP001083|pid:none) Clostridium botulinum Ba4 str. ... 35 6.9
S76155_1(S76155|pid:none) tlr=Toll-like receptor [Drosophila mel... 35 6.9
DQ302674_1(DQ302674|pid:none) Listeria monocytogenes strain FSLF... 35 6.9
AJ618974_1(AJ618974|pid:none) Bos taurus mRNA for toll-like rece... 35 6.9
EU746472_1(EU746472|pid:none) Bos indicus x Bos taurus isolate 8... 35 6.9
AM910994_541(AM910994|pid:none) Plasmodium knowlesi strain H chr... 35 6.9
DQ302678_1(DQ302678|pid:none) Listeria monocytogenes strain FSLF... 35 6.9
DQ302683_1(DQ302683|pid:none) Listeria monocytogenes strain FSLS... 35 6.9
U77367_1(U77367|pid:none) Listeria monocytogenes internalin (inl... 35 6.9
AB1126(AB1126) internalin, peptidoglycan bound protein (LPxTG mo... 35 6.9
DQ302684_1(DQ302684|pid:none) Listeria monocytogenes strain FSLS... 35 6.9
(O55226) RecName: Full=Chondroadherin; AltName: Full=Cartilage l... 35 9.1
DQ302566_1(DQ302566|pid:none) Listeria monocytogenes strain FSLF... 35 9.1
CP000962_1769(CP000962|pid:none) Clostridium botulinum A3 str. L... 35 9.1
AJ012386_1(AJ012386|pid:none) Listeria monocytogenes inlG gene, ... 35 9.1
CP001102_101(CP001102|pid:none) Candidatus Amoebophilus asiaticu... 35 9.1
DQ529276_1(DQ529276|pid:none) Ictalurus punctatus toll-like rece... 35 9.1
EF409979_1(EF409979|pid:none) Listeria monocytogenes strain LI05... 35 9.1
CP000939_1706(CP000939|pid:none) Clostridium botulinum B1 str. O... 35 9.1
CP001037_5526(CP001037|pid:none) Nostoc punctiforme PCC 73102, c... 35 9.1
CT005269_317(CT005269|pid:none) Leishmania major strain Friedlin... 35 9.1
CR954209_147(CR954209|pid:none) Ostreococcus tauri strain OTTH05... 35 9.1
AY965563_1(AY965563|pid:none) Eptatretus stoutii clone Es6VLRB.B... 35 9.1
BC167614_1(BC167614|pid:none) Xenopus tropicalis hypothetical pr... 35 9.1

>BT049021_1(BT049021|pid:none) Salmo salar clone ssal-rgb2-571-162
C10orf11 homolog putative mRNA, complete cds.
Length = 196

Score = 130 bits (326), Expect = 2e-28
Identities = 65/152 (42%), Positives = 97/152 (63%)
Frame = +1

Query: 121 LDLAYRDIIEINPQIVDRFGPYVKELDLSNNNLEKDLTILEGFKRLTTLVLDNNRITHHI 300
L AY+ ++EI +++ ++ LDLS N LE+ +L ++L+TL+LD N + H+
Sbjct: 28 LSFAYQGLLEIPYEVILAQQHTLEVLDLSYNLLEESPALLGELEQLSTLILDCNSYSSHV 87

Query: 301 KFPLLTQLHTLWINSNQISNLSVFVDRVCESFPNIRTFSMLKNEACPNFFNGHSLRXYKD 480
KFP + + T+WIN N+ISNL +FV+ + FPNI+ SM+ NEA P++FNG SL Y D
Sbjct: 88 KFPYMPSVTTVWINKNKISNLPIFVEEIRSKFPNIKILSMMNNEAAPSYFNGGSLPQYID 147

Query: 481 YRLYIXSRLKYVQILDSTPVTPEERVDAIKLY 576
YR Y+ S++ + ILD T V +ER A K Y
Sbjct: 148 YRQYVISQIPSLTILDDTEVLGKERAQAEKTY 179

Lambda K H
0.318 0.134 0.401

Gapped
Lambda K H
0.267 0.0410 0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3236559
Number of Hits to DB: 1,535,451,893
Number of extensions: 26013691
Number of successful extensions: 75066
Number of sequences better than 10.0: 511
Number of HSP's gapped: 74563
Number of HSP's successfully gapped: 720
Length of query: 488
Length of database: 1,051,180,864
Length adjustment: 133
Effective length of query: 355
Effective length of database: 620,718,517
Effective search space: 220355073535
Effective search space used: 220355073535
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)

PSORT

psg: 0.47 gvh: 0.29 alm: 0.52 top: 0.53 tms: 0.00 mit: 0.21 mip: 0.00
nuc: 0.13 erl: 0.00 erm: 0.20 pox: 0.00 px2: 0.00 vac: 0.00 rnp: 0.00
act: 0.00 caa: 0.00 yqr: 0.00 tyr: 0.00 leu: 0.00 gpi: 0.00 myr: 0.00
dna: 0.00 rib: 0.00 bac: 0.00 m1a: 0.00 m1b: 0.00 m2 : 0.00 mNt: 0.00
m3a: 0.00 m3b: 0.00 m_ : 1.00

44.0 %: cytoplasmic
40.0 %: nuclear
12.0 %: mitochondrial
4.0 %: cytoskeletal

>> prediction for Contig-U14684-1 is cyt

VS (DIR, S) 0
VH (FL, L) 0
VF (FL, S) 1
AH (FL, L) 0
AF (FL, S) 0
SL (DIR, L) 2
SS (DIR, S) 0
SH (FL, L) 0
SF (FL, S) 0
CH (FL, L) 0
CF (FL, S) 0
FCL (DIR, L) 0
FC (DIR, S) 0
FC-IC (SUB) 0