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Dicty_cDB
Contig List | Clone List | cDNA Library List
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NBDC - LSDB Archive
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Dicty_cDB
Contig List | Clone List | cDNA Library List
Atlas
Atlas | Atlas Image List
Contig-U02748-1
Contig ID Contig-U02748-1
Contig update 2001. 8.29
Contig sequence 
>Contig-U02748-1 (Contig-U02748-1Q) /CSM_Contig/Contig-U02748-1Q.Seq.d
GTAGTTTATCAAGTAGTGTTGGTAGTATTGGTTCAGGTGGTGGTGGTGGT
TCACCAAAATTATCTAGAAAACATAAATCAACAACAAATATTACAAATTA
TTTGACTACTAGTGGTGAGCAAAAATTATTTTCATCAAATGGCGACCCAA
CGATAAATCAATCATGTCCAACATCAATTACCAATACAAATTATAATGTT
AATAAAAAGACATCAAGACCACCATCACCTTCACCTTCACCATCTCCTTC
AAAAGAAAGGATTGTGGAAGTTCAACAAAATTTATTAAATATTCCTGATA
ATAAAATCGTCTCAATCAATAGAAAAAATAGTATTGAATCGAAATCAAGT
AGTATTTGTGCCACTTTAAATAGTAGTAAATTTATTGACGATGGTAATTC
AAAAAATTGTGAATCCTCTGATATTCTATCAACTTCTTCTTCAAATACAA
GTATAAGTAATAGTAGTAGTTTAAATAATAATAATGGTAGTACAAATAGT
ACTTCCACAAGTAATAGTTGTACTAGTGGTAGTGGTAGTGGTAGTGGTAG
Gap no gap
Contig length 550
Chromosome number (1..6, M) 2
Chromosome length 8467578
Start point 3683008
End point 3682458
Strand (PLUS/MINUS) MINUS
Number of clones 1
Number of EST 1
Link to clone list U02748
List of clone(s) 

est1=AFH837F,1,551
Translated Amino Acid sequence 
SLSSSVGSIGSGGGGGSPKLSRKHKSTTNITNYLTTSGEQKLFSSNGDPTINQSCPTSIT
NTNYNVNKKTSRPPSPSPSPSPSKERIVEVQQNLLNIPDNKIVSINRKNSIESKSSSICA
TLNSSKFIDDGNSKNCESSDILSTSSSNTSISNSSSLNNNNGSTNSTSTSNSCTSGSGSG
SG
Translated Amino Acid sequence (All Frames) 
Frame A:
vvyqvvlvvlvqvvvvvhqnyleninqqqilqii*llvvsknyfhqmatqr*inhvqhql
piqiimlikrhqdhhhlhlhhllqkkglwkfnkiy*ifliikssqsiekivlnrnqvvfv
pl*ivvnlltmviqkivnplifyqlllqiqv*vivvv*iiimvvqivlpqvivvlvvvvv
vvv


Frame B:
*fik*cw*ywfrwwwwftkii*kt*innkyyklfdy*w*akiifikwrpndksimsniny
qykl*c**kdikttitftftisfkrkdcgsstkfikys***nrlnq*kk*y*ieik*ylc
hfk***iy*rw*fkkl*il*ysinfffkykyk****fk***w*yk*yfhk**ly*w*w*w
*w*


Frame C:
SLSSSVGSIGSGGGGGSPKLSRKHKSTTNITNYLTTSGEQKLFSSNGDPTINQSCPTSIT
NTNYNVNKKTSRPPSPSPSPSPSKERIVEVQQNLLNIPDNKIVSINRKNSIESKSSSICA
TLNSSKFIDDGNSKNCESSDILSTSSSNTSISNSSSLNNNNGSTNSTSTSNSCTSGSGSG
SG
own update 2004. 6. 9
Homology vs CSM-cDNA 
Query= Contig-U02748-1 (Contig-U02748-1Q)
/CSM_Contig/Contig-U02748-1Q.Seq.d
         (550 letters)

Database: CSM
           6905 sequences; 5,674,871 total letters


                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

Contig-U02748-1 (Contig-U02748-1Q) /CSM_Contig/Conti...  1090  0.0
Contig-U11970-1 (Contig-U11970-1Q) /CSM_Contig/Conti...    54  2e-07
Contig-U08227-1 (Contig-U08227-1Q) /CSM_Contig/Conti...    54  2e-07
Contig-U14059-1 (Contig-U14059-1Q) /CSM_Contig/Conti...    50  3e-06
Contig-U12561-1 (Contig-U12561-1Q) /CSM_Contig/Conti...    50  3e-06
Contig-U10832-1 (Contig-U10832-1Q) /CSM_Contig/Conti...    50  3e-06
Contig-U05175-1 (Contig-U05175-1Q) /CSM_Contig/Conti...    50  3e-06
Contig-U12001-1 (Contig-U12001-1Q) /CSM_Contig/Conti...    48  1e-05
Contig-U11524-1 (Contig-U11524-1Q) /CSM_Contig/Conti...    48  1e-05
Contig-U09164-1 (Contig-U09164-1Q) /CSM_Contig/Conti...    48  1e-05

>Contig-U02748-1 (Contig-U02748-1Q) /CSM_Contig/Contig-U02748-1Q.Seq.d
          Length = 550

 Score = 1090 bits (550), Expect = 0.0
 Identities = 550/550 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   gtagtttatcaagtagtgttggtagtattggttcaggtggtggtggtggttcaccaaaat 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   gtagtttatcaagtagtgttggtagtattggttcaggtggtggtggtggttcaccaaaat 60

                                                                       
Query: 61  tatctagaaaacataaatcaacaacaaatattacaaattatttgactactagtggtgagc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  tatctagaaaacataaatcaacaacaaatattacaaattatttgactactagtggtgagc 120

                                                                       
Query: 121 aaaaattattttcatcaaatggcgacccaacgataaatcaatcatgtccaacatcaatta 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 aaaaattattttcatcaaatggcgacccaacgataaatcaatcatgtccaacatcaatta 180

                                                                       
Query: 181 ccaatacaaattataatgttaataaaaagacatcaagaccaccatcaccttcaccttcac 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ccaatacaaattataatgttaataaaaagacatcaagaccaccatcaccttcaccttcac 240

                                                                       
Query: 241 catctccttcaaaagaaaggattgtggaagttcaacaaaatttattaaatattcctgata 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 catctccttcaaaagaaaggattgtggaagttcaacaaaatttattaaatattcctgata 300

                                                                       
Query: 301 ataaaatcgtctcaatcaatagaaaaaatagtattgaatcgaaatcaagtagtatttgtg 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ataaaatcgtctcaatcaatagaaaaaatagtattgaatcgaaatcaagtagtatttgtg 360

                                                                       
Query: 361 ccactttaaatagtagtaaatttattgacgatggtaattcaaaaaattgtgaatcctctg 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ccactttaaatagtagtaaatttattgacgatggtaattcaaaaaattgtgaatcctctg 420

                                                                       
Query: 421 atattctatcaacttcttcttcaaatacaagtataagtaatagtagtagtttaaataata 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 atattctatcaacttcttcttcaaatacaagtataagtaatagtagtagtttaaataata 480

                                                                       
Query: 481 ataatggtagtacaaatagtacttccacaagtaatagttgtactagtggtagtggtagtg 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 ataatggtagtacaaatagtacttccacaagtaatagttgtactagtggtagtggtagtg 540

                     
Query: 541 gtagtggtag 550
           ||||||||||
Sbjct: 541 gtagtggtag 550


>Contig-U11970-1 (Contig-U11970-1Q) /CSM_Contig/Contig-U11970-1Q.Seq.d
          Length = 1141

 Score = 54.0 bits (27), Expect = 2e-07
 Identities = 27/27 (100%)
 Strand = Plus / Plus

                                      
Query: 524 tagtggtagtggtagtggtagtggtag 550
           |||||||||||||||||||||||||||
Sbjct: 521 tagtggtagtggtagtggtagtggtag 547


 Score = 48.1 bits (24), Expect = 1e-05
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 527 tggtagtggtagtggtagtggtag 550
           ||||||||||||||||||||||||
Sbjct: 518 tggtagtggtagtggtagtggtag 541


 Score = 48.1 bits (24), Expect = 1e-05
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 524 tagtggtagtggtagtggtagtgg 547
           ||||||||||||||||||||||||
Sbjct: 527 tagtggtagtggtagtggtagtgg 550


>Contig-U08227-1 (Contig-U08227-1Q) /CSM_Contig/Contig-U08227-1Q.Seq.d
          Length = 1211

 Score = 54.0 bits (27), Expect = 2e-07
 Identities = 27/27 (100%)
 Strand = Plus / Plus

                                      
Query: 524 tagtggtagtggtagtggtagtggtag 550
           |||||||||||||||||||||||||||
Sbjct: 797 tagtggtagtggtagtggtagtggtag 823


 Score = 54.0 bits (27), Expect = 2e-07
 Identities = 27/27 (100%)
 Strand = Plus / Plus

                                      
Query: 524 tagtggtagtggtagtggtagtggtag 550
           |||||||||||||||||||||||||||
Sbjct: 779 tagtggtagtggtagtggtagtggtag 805


 Score = 54.0 bits (27), Expect = 2e-07
 Identities = 27/27 (100%)
 Strand = Plus / Plus

                                      
Query: 524 tagtggtagtggtagtggtagtggtag 550
           |||||||||||||||||||||||||||
Sbjct: 791 tagtggtagtggtagtggtagtggtag 817


 Score = 54.0 bits (27), Expect = 2e-07
 Identities = 27/27 (100%)
 Strand = Plus / Plus

                                      
Query: 524 tagtggtagtggtagtggtagtggtag 550
           |||||||||||||||||||||||||||
Sbjct: 785 tagtggtagtggtagtggtagtggtag 811


 Score = 50.1 bits (25), Expect = 3e-06
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                    
Query: 526 gtggtagtggtagtggtagtggtag 550
           |||||||||||||||||||||||||
Sbjct: 775 gtggtagtggtagtggtagtggtag 799


 Score = 50.1 bits (25), Expect = 3e-06
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                    
Query: 524 tagtggtagtggtagtggtagtggt 548
           |||||||||||||||||||||||||
Sbjct: 803 tagtggtagtggtagtggtagtggt 827


 Score = 30.2 bits (15), Expect = 2.4
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                          
Query: 527 tggtagtggtagtgg 541
           |||||||||||||||
Sbjct: 50  tggtagtggtagtgg 64


 Score = 30.2 bits (15), Expect = 2.4
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                          
Query: 533 tggtagtggtagtgg 547
           |||||||||||||||
Sbjct: 50  tggtagtggtagtgg 64


  Database: CSM
    Posted date:  Jun 9, 2004  7:35 PM
  Number of letters in database: 5,674,871
  Number of sequences in database:  6905
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 25,927
Number of Sequences: 6905
Number of extensions: 25927
Number of successful extensions: 4480
Number of sequences better than 10.0: 1145
length of query: 550
length of database: 5,674,871
effective HSP length: 16
effective length of query: 534
effective length of database: 5,564,391
effective search space: 2971384794
effective search space used: 2971384794
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 14 (28.2 bits)
dna update 2009. 5.21
Homology vs DNA 
Query= Contig-U02748-1 (Contig-U02748-1Q) /CSM_Contig/Contig-U02748-1Q.Seq.d
         (550 letters)

Database: ddbj_A
           102,105,510 sequences; 101,790,757,118 total letters

Searching..................................................done

                                                             Score    E
Sequences producing significant alignments:                  (bits) Value  N

(BJ326409) Dictyostelium discoideum cDNA clone:dda16j10, 5' ...   878   0.0    2
(AC116984) Dictyostelium discoideum chromosome 2 map 2567470...   878   0.0    2
(BX538353) Cryptosporidium parvum chromosome 6, complete seq...    54   1e-06  2
(DH502270) Monosiga ovata DNA, fosmid clone: MOF-071E23, gen...    56   4e-06  2
(EJ230854) 1092402591175 Global-Ocean-Sampling_GS-27-01-01-1...    62   2e-05  1
(EX844625) CBNC5488.rev CBNC Phycomyces blakesleeanus NRRL15...    62   2e-05  1
(AC168596) Strongylocentrotus purpuratus clone R3-3065C11, W...    56   3e-05  4
(DH475681) Monosiga ovata DNA, fosmid clone: MOF-024M24, gen...    54   4e-05  2
(AC117176) Dictyostelium discoideum chromosome 2 map 5018074...    44   5e-05  9
(DH481464) Monosiga ovata DNA, fosmid clone: MOF-035A21, gen...    54   6e-05  2
(DT752575) EST1186424 Aquilegia cDNA library Aquilegia formo...    54   6e-05  2
(DH489789) Monosiga ovata DNA, fosmid clone: MOF-049F02, gen...    50   6e-05  2
(DE846921) Macropus eugenii DNA, BAC clone: MEB1-008K11_R, 3...    56   7e-05  2
(AC181321) Strongylocentrotus purpuratus clone R3-115E19, WO...    58   2e-04  3
(FE756013) CAYF4751.b3 CAYF Petrolisthes cinctipes heart, wh...    52   2e-04  2
(FE755923) CAYF4703.b3 CAYF Petrolisthes cinctipes heart, wh...    52   2e-04  2
(FE755911) CAYF4695.b3 CAYF Petrolisthes cinctipes heart, wh...    52   2e-04  2
(BJ371374) Dictyostelium discoideum cDNA clone:ddc57b22, 5' ...    52   2e-04  2
(AU074886) Dictyostelium discoideum slug cDNA, clone SSM360.       52   2e-04  2
(AC116925) Dictyostelium discoideum chromosome 2 map 4189423...    42   2e-04  4
(AU072716) Dictyostelium discoideum slug cDNA, clone SSA586.       52   3e-04  2
(AU072417) Dictyostelium discoideum slug cDNA, clone SSE449.       52   3e-04  2
(AL935181) Zebrafish DNA sequence from clone CH211-162K9.          58   4e-04  1
(CU207379) Mouse DNA sequence from clone CH29-505C15 on chro...    58   4e-04  1
(CT010470) Mouse DNA sequence from clone RP23-313D12 on chro...    58   4e-04  1
(AL645783) Mouse DNA sequence from clone RP23-459H16 on chro...    58   4e-04  1
(AL590625) Mouse DNA sequence from clone RP23-467M8 on chrom...    58   4e-04  1
(AC167021) Mus musculus BAC clone RP23-152D8 from chromosome...    58   4e-04  1
(AC154355) Mus musculus BAC clone RP23-220N4 from 13, comple...    58   4e-04  1
(AY764183) Aplysia californica syntaxin mRNA, complete cds.        58   4e-04  1
(AC162362) Mus musculus chromosome 5 clone RP23-24M15 map 5,...    58   4e-04  1
(AC135039) Rattus norvegicus clone CH230-178I12, WORKING DRA...    58   4e-04  1
(AC129051) Rattus norvegicus clone CH230-89P7, *** SEQUENCIN...    58   4e-04  1
(AC128909) Rattus norvegicus clone CH230-321C12, WORKING DRA...    58   4e-04  1
(AC111403) Rattus norvegicus clone CH230-95P17, WORKING DRAF...    58   4e-04  1
(AC095424) Rattus norvegicus clone CH230-7A8, *** SEQUENCING...    58   4e-04  1
(AC201189) Strongylocentrotus purpuratus clone R3-15A6, WORK...    58   4e-04  1
(AC184882) Strongylocentrotus purpuratus clone R3-1015A21, W...    58   4e-04  1
(AC184237) Strongylocentrotus purpuratus clone R3-3061A4, WO...    58   4e-04  1
(AC180852) Strongylocentrotus purpuratus clone R3-3068H12, W...    58   4e-04  1
(AC180528) Strongylocentrotus purpuratus clone R3-3016G12, W...    58   4e-04  1
(AC179960) Strongylocentrotus purpuratus clone R3-20J22, WOR...    58   4e-04  1
(AC179911) Strongylocentrotus purpuratus clone R3-1003F14, W...    58   4e-04  1
(AC179790) Strongylocentrotus purpuratus clone R3-1015B13, W...    58   4e-04  1
(AC176867) Strongylocentrotus purpuratus clone R3-31D6, WORK...    58   4e-04  1
(AC176848) Strongylocentrotus purpuratus clone R3-1110H21, W...    58   4e-04  1
(AC176035) Strongylocentrotus purpuratus clone R3-18I5, WORK...    58   4e-04  1
(AC168612) Strongylocentrotus purpuratus clone R3-3046H17, W...    58   4e-04  1
(DH435083) Macropus eugenii DNA with T7 primer, fosmid clone...    58   4e-04  1
(DE236575) Trifolium pratense DNA, clone:RCG32054.                 58   4e-04  1
(DE236557) Trifolium pratense DNA, clone:RCG32019.                 58   4e-04  1
(BH094533) RPCI-24-357H22.TV RPCI-24 Mus musculus genomic cl...    54   5e-04  2
(DH495191) Monosiga ovata DNA, fosmid clone: MOF-059A03, gen...    50   5e-04  2
(DH475704) Monosiga ovata DNA, fosmid clone: MOF-024N13, gen...    54   6e-04  2
(EU094835) Humulus lupulus clone ACC2-E14-4 microsatellite s...    54   7e-04  2
(FH212517) CHO_OF3368xe19f1.ab1 CHO_OF3 Nicotiana tabacum ge...    50   8e-04  2
(DH478742) Monosiga ovata DNA, fosmid clone: MOF-030F09, gen...    54   8e-04  2
(AG518059) Mus musculus molossinus DNA, clone:MSMg01-424A18....    50   8e-04  2
(AC115684) Dictyostelium discoideum chromosome 2 map 3108975...    36   0.001  7
(AC161520) Mus musculus chromosome 7, clone RP24-282D19, com...    56   0.001  1
(AC156033) Mus musculus BAC clone RP23-377G8 from chromosome...    56   0.001  1
(AC136018) Mus musculus BAC clone RP24-125E6 from chromosome...    56   0.001  1
(AP007167) Aspergillus oryzae RIB40 genomic DNA, SC020.            56   0.001  1
(AM468626) Vitis vinifera contig VV78X207150.8, whole genome...    56   0.001  1
(AC156547) Mus musculus chromosome 15 clone RP24-74I19 map 1...    56   0.001  1
(AC184369) Strongylocentrotus purpuratus clone R3-1011G16, W...    56   0.001  1
(AC181787) Strongylocentrotus purpuratus clone R3-1030C18, W...    56   0.001  1
(AC181339) Strongylocentrotus purpuratus clone R3-4019F5, WO...    56   0.001  1
(AC179039) Strongylocentrotus purpuratus clone R3-4005B22, W...    56   0.001  1
(AC168542) Strongylocentrotus purpuratus clone R3-3091L20, W...    56   0.001  1
(EK191781) 1095460021551 Global-Ocean-Sampling_GS-31-01-01-1...    56   0.001  1
(CZ289679) cp65f01.r Candida parapsilosis Random Genomic Lib...    56   0.001  1
(CR242702) Reverse strand read from insert in 5'HPRT inserti...    56   0.001  1
(DC584664) Diospyros kaki cDNA, clone: KA017_B05, 5' end, ex...    56   0.001  1
(GH609690) G1297P564RC12.T0 C. parvum KSU-1 normalized sporo...    56   0.001  1
(GH608470) G1297P560RE18.T0 C. parvum KSU-1 normalized sporo...    56   0.001  1
(GH605636) G1297P554RK8.T0 C. parvum KSU-1 normalized sporoz...    56   0.001  1
(GH598107) G1297P534RI16.T0 C. parvum KSU-1 normalized sporo...    56   0.001  1
(GH595312) G1297P530RC7.T0 C. parvum KSU-1 normalized sporoz...    56   0.001  1
(GH593848) G1297P529FB7.T0 C. parvum KSU-1 normalized sporoz...    56   0.001  1
(GH592835) G1297P525RL5.T0 C. parvum KSU-1 normalized sporoz...    56   0.001  1
(GH588812) G1297P59RA22.T0 C. parvum KSU-1 normalized sporoz...    56   0.001  1
(AC172308) Strongylocentrotus purpuratus clone R3-14N10, WOR...    54   0.002  2
(AC110551) Mus musculus chromosome 7, clone RP23-245P16, com...    54   0.002  2
(AC177352) Strongylocentrotus purpuratus clone R3-49M12, WOR...    50   0.002  2
(AC181045) Strongylocentrotus purpuratus clone R3-3050I12, W...    54   0.002  2
(BJ405424) Dictyostelium discoideum cDNA clone:dds31j17, 3' ...    46   0.003  2
(EH743760) CNMS3450.b1_D24.ab1 CNM(LMS) spotted knapweed Cen...    50   0.003  2
(AC098951) Rattus norvegicus clone CH230-173E15, WORKING DRA...    54   0.003  2
(BJ403671) Dictyostelium discoideum cDNA clone:dds25k24, 3' ...    46   0.003  2
(DH488845) Monosiga ovata DNA, fosmid clone: MOF-047L10, gen...    50   0.004  2
(AC181523) Strongylocentrotus purpuratus clone R3-64O23, WOR...    54   0.004  3
(G65032) DH0564 Dictyostelium discoideum ( P.Dear ) Dictyost...    46   0.005  2
(DE222678) Trifolium pratense DNA, clone:RCG14187.                 46   0.005  2
(FE746659) CAYC3858.b1 CAYC Petrolisthes cinctipes heart, ne...    34   0.005  4
(CT025668) Mouse DNA sequence from clone RP24-370M11 on chro...    54   0.006  1
(CT025625) Mouse DNA sequence from clone RP23-449N15 on chro...    54   0.006  1
(AL929275) Mouse DNA sequence from clone RP23-65P13 on chrom...    54   0.006  1
(AL928659) Mouse DNA sequence from clone RP23-271B13 on chro...    54   0.006  1
(AJ403606) M.musculus DNA for GFAP-binding fragment GFAPD10.       54   0.006  1
(AC160969) Mus musculus BAC clone RP24-422L17 from chromosom...    54   0.006  1
(AC156279) Mus musculus 6 BAC RP24-244D20 (Roswell Park Canc...    54   0.006  1
(AC154842) Mus musculus BAC clone RP23-55C11 from chromosome...    54   0.006  1
(AC154720) Mus musculus BAC clone RP24-371C21 from chromosom...    54   0.006  1
(AC153993) Mus musculus 6 BAC RP24-568N16 (Roswell Park Canc...    54   0.006  1
(AC153839) Mus musculus 6 BAC RP23-93A21 (Roswell Park Cance...    54   0.006  1
(AC153838) Mus musculus 6 BAC RP23-82B24 (Roswell Park Cance...    54   0.006  1
(AC153512) Mus musculus 10 BAC RP23-18K14 (Roswell Park Canc...    54   0.006  1
(AC140337) Mus musculus BAC clone RP23-238H7 from 1, complet...    54   0.006  1
(AC132435) Mus musculus BAC clone RP23-223L12 from 10, compl...    54   0.006  1
(AC130716) Mus musculus BAC clone RP23-463B12 from 3, comple...    54   0.006  1
(AC125395) Mus musculus BAC clone RP23-213J1 from chromosome...    54   0.006  1
(AC122923) Mus musculus BAC clone RP23-36G5 from 10, complet...    54   0.006  1
(AC122837) Mus musculus BAC clone RP23-189N3 from 16, comple...    54   0.006  1
(AC118003) Mus musculus chromosome 5, clone RP23-146G20, com...    54   0.006  1
(AC117192) Mus musculus BAC clone RP23-77A18 from 2, complet...    54   0.006  1
(AC116815) Mus musculus chromosome 5, clone RP24-357H22, com...    54   0.006  1
(AC115742) Mus musculus chromosome 7, clone RP23-477E13, com...    54   0.006  1
(AC115020) Mus musculus chromosome 1, clone RP24-231D14, com...    54   0.006  1
(AC114593) Mus musculus chromosome 14, clone RP23-44B17, com...    54   0.006  1
(AC107850) Mus musculus chromosome 17, clone RP23-450G2, com...    54   0.006  1
(AC197452) MACACA MULATTA BAC clone CH250-359J10 from chromo...    54   0.006  1
(FM992695) Candida dubliniensis CD36 chromosome R, complete ...    54   0.006  1
(FM992691) Candida dubliniensis CD36 chromosome 4, complete ...    54   0.006  1
(CR382131) Yarrowia lipolytica strain CLIB122 chromosome E c...    54   0.006  1
(BX294013) Neurospora crassa DNA linkage group V Cosmid cont...    54   0.006  1
(AY362701) Pichia pastoris aspartic protease yapsin 1 (YPS1)...    54   0.006  1
(AP008218) Oryza sativa (japonica cultivar-group) genomic DN...    54   0.006  1
(AP008215) Oryza sativa (japonica cultivar-group) genomic DN...    54   0.006  1
(AP008211) Oryza sativa (japonica cultivar-group) genomic DN...    54   0.006  1
(AP007171) Aspergillus oryzae RIB40 genomic DNA, SC011.            54   0.006  1
(AP005872) Oryza sativa Japonica Group genomic DNA, chromoso...    54   0.006  1
(AM270285) Aspergillus niger contig An12c0290, complete genome.    54   0.006  1
(AL732376) Oryza sativa chromosome 12, . BAC OSJNBa0086B10 o...    54   0.006  1
(AC149079) Medicago truncatula chromosome 8 clone mth2-75i8,...    54   0.006  1
(AC098571) Oryza sativa Japonica Group chromosome 5 clone OJ...    54   0.006  1
(EA700756) Sequence 79635 from patent US 7365185.                  54   0.006  1
(EA687727) Sequence 66606 from patent US 7365185.                  54   0.006  1
(U43183) Trypanosoma vivax diagnostic antigen gene, partial ...    54   0.006  1
(L25129) Trypanosoma vivax (ILDat 1.2) species-specific anti...    54   0.006  1
(AY484460) Dictyostelium discoideum kinesin family member 3 ...    54   0.006  1
(AY392443) Dictyostelium discoideum possible endotoxin gene,...    54   0.006  1
(AY162212) Dictyostelium discoideum kinesin 1 gene, partial ...    54   0.006  1
(AF024654) Dictyostelium discoideum hybrid histidine kinase ...    54   0.006  1
(AC116957) Dictyostelium discoideum chromosome 2 map 1685067...    54   0.006  1
(AB197011) Haliotis discus hannai DNA, microsatellite Hdh61.       54   0.006  1
(AC157579) Mus musculus chromosome 1 clone RP23-14E16 map 1,...    54   0.006  1
(AC157150) Bos taurus clone CH240-67G17, WORKING DRAFT SEQUE...    54   0.006  1
(AC129398) Rattus norvegicus clone CH230-6C6, WORKING DRAFT ...    54   0.006  1
(AC128866) Rattus norvegicus clone CH230-108O23, *** SEQUENC...    54   0.006  1
(AC126652) Rattus norvegicus clone CH230-55K6, *** SEQUENCIN...    54   0.006  1
(AC125299) Rattus norvegicus clone CH230-502C11, WORKING DRA...    54   0.006  1
(AC119130) Rattus norvegicus clone CH230-414I23, *** SEQUENC...    54   0.006  1
(AC118410) Rattus norvegicus clone CH230-218N15, *** SEQUENC...    54   0.006  1
(AC114113) Rattus norvegicus clone CH230-186O3, WORKING DRAF...    54   0.006  1
(AC113811) Rattus norvegicus clone CH230-216D16, *** SEQUENC...    54   0.006  1
(AC112456) Rattus norvegicus clone CH230-110N23, *** SEQUENC...    54   0.006  1
(AC111350) Rattus norvegicus clone CH230-157E18, WORKING DRA...    54   0.006  1
(AC106181) Rattus norvegicus clone CH230-116O11, *** SEQUENC...    54   0.006  1
(AC103123) Rattus norvegicus clone CH230-226B23, WORKING DRA...    54   0.006  1
(AC100459) Mus musculus clone RP23-138O24, LOW-PASS SEQUENCE...    54   0.006  1
(AC097195) Rattus norvegicus clone CH230-190H11, *** SEQUENC...    54   0.006  1
(AP003645) Mus musculus genomic DNA, chromosome 16q clone:RP...    54   0.006  1
(AL513006) Oryza sativa chromosome 12 ***SEQUENCING IN PROGR...    54   0.006  1
(AC234603) Tupaia belangeri clone CH275-376N22, WORKING DRAF...    54   0.006  1
(AC215175) Zea mays chromosome 3 clone CH201-97G13; ZMMBBc00...    54   0.006  1
(AC214121) Zea mays chromosome 2 clone CH201-145O9; ZMMBBc01...    54   0.006  1
(AC205316) Zea mays chromosome 8 clone CH201-501O16; ZMMBBc0...    54   0.006  1
(AC202150) Zea mays chromosome 1 clone ZMMBBb-320G12; ZMMBBb...    54   0.006  1
(AC202109) Zea mays chromosome 8 clone ZMMBBb-313K3; ZMMBBb0...    54   0.006  1
(AC201183) Strongylocentrotus purpuratus clone R3-14O10, WOR...    54   0.006  1
(AC184236) Strongylocentrotus purpuratus clone R3-3057P13, W...    54   0.006  1
(AC184210) Strongylocentrotus purpuratus clone R3-25L6, WORK...    54   0.006  1
(AC181725) Strongylocentrotus purpuratus clone R3-1039D03, W...    54   0.006  1
(AC181364) Strongylocentrotus purpuratus clone R3-113H02, WO...    54   0.006  1
(AC181279) Strongylocentrotus purpuratus clone R3-4015J17, W...    54   0.006  1
(AC181102) Strongylocentrotus purpuratus clone R3-3047K03, W...    54   0.006  1
(AC181062) Strongylocentrotus purpuratus clone R3-3050B8, WO...    54   0.006  1
(AC181014) Strongylocentrotus purpuratus clone R3-3055G15, W...    54   0.006  1
(AC180923) Strongylocentrotus purpuratus clone R3-3063O14, W...    54   0.006  1
(AC180630) Strongylocentrotus purpuratus clone R3-3090I22, W...    54   0.006  1
(AC180587) Strongylocentrotus purpuratus clone R3-3094G12, W...    54   0.006  1
(AC180305) Strongylocentrotus purpuratus clone R3-3119N05, W...    54   0.006  1
(AC179758) Strongylocentrotus purpuratus clone R3-1017K12, W...    54   0.006  1
(AC179669) Strongylocentrotus purpuratus clone R3-1021P5, WO...    54   0.006  1
(AC179481) Strongylocentrotus purpuratus clone R3-63M7, WORK...    54   0.006  1
(AC179091) Strongylocentrotus purpuratus clone R3-4010A15, W...    54   0.006  1
(AC178824) Strongylocentrotus purpuratus clone R3-29G2, WORK...    54   0.006  1
(AC178238) Strongylocentrotus purpuratus clone R3-3086D15, W...    54   0.006  1
(AC178177) Strongylocentrotus purpuratus clone R3-1116N12, W...    54   0.006  1
(AC177776) Strongylocentrotus purpuratus clone R3-1002M2, WO...    54   0.006  1
(AC177726) Strongylocentrotus purpuratus clone R3-1008P4, WO...    54   0.006  1
(AC177654) Strongylocentrotus purpuratus clone R3-3057A5, WO...    54   0.006  1
(AC177346) Strongylocentrotus purpuratus clone R3-46P4, WORK...    54   0.006  1
(AC177333) Strongylocentrotus purpuratus clone R3-1032L15, W...    54   0.006  1
(AC177271) Strongylocentrotus purpuratus clone R3-43O10, WOR...    54   0.006  1
(AC177118) Strongylocentrotus purpuratus clone R3-4014D4, WO...    54   0.006  1
(AC177092) Strongylocentrotus purpuratus clone R3-4012F20, W...    54   0.006  1
(AC176851) Strongylocentrotus purpuratus clone R3-3120J18, W...    54   0.006  1
(AC176776) Strongylocentrotus purpuratus clone R3-3104K2, WO...    54   0.006  1
(AC176220) Strongylocentrotus purpuratus clone R3-3062G22, W...    54   0.006  1
(AC175949) Strongylocentrotus purpuratus clone R3-3038B20, W...    54   0.006  1
(AC173635) Strongylocentrotus purpuratus clone R3-3028I10, *...    54   0.006  1
(AC168648) Strongylocentrotus purpuratus clone R3-3017J8, WO...    54   0.006  1
(AC168547) Strongylocentrotus purpuratus clone R3-3091I15, W...    54   0.006  1
(AC168449) Strongylocentrotus purpuratus clone R3-38N3, WORK...    54   0.006  1
(AZ861188) 2M0167H01R Mouse 10kb plasmid UUGC1M library Mus ...    54   0.006  1
(AZ082714) RPCI-23-30L8.TV RPCI-23 Mus musculus genomic clon...    54   0.006  1
(AQ449579) 500002B05.x2 CpIOWAM13mp18gDNA1 Cryptosporidium p...    54   0.006  1
(FH458869) CHO_OF4929xm01r1.ab1 CHO_OF4 Nicotiana tabacum ge...    54   0.006  1
(FH348014) CHO_OF4264xc19f1.ab1 CHO_OF4 Nicotiana tabacum ge...    54   0.006  1
(FH141844) CHO_OF3711xc17r1.ab1 CHO_OF3 Nicotiana tabacum ge...    54   0.006  1
(ER280954) 1095595489514 Global-Ocean-Sampling_GS-33-01-01-1...    54   0.006  1
(ER197365) 1095522321067 Global-Ocean-Sampling_GS-33-01-01-1...    54   0.006  1
(ER098727) 1095521889033 Global-Ocean-Sampling_GS-33-01-01-1...    54   0.006  1
(EK749987) 1093017015792 Global-Ocean-Sampling_GS-33-01-01-1...    54   0.006  1
(EK646331) 1092351260866 Global-Ocean-Sampling_GS-33-01-01-1...    54   0.006  1
(EK495661) 1095505156535 Global-Ocean-Sampling_GS-32-01-01-1...    54   0.006  1
(EK480279) 1095469513030 Global-Ocean-Sampling_GS-32-01-01-1...    54   0.006  1
(EJ498147) 1095403590145 Global-Ocean-Sampling_GS-28-01-01-1...    54   0.006  1
(EJ338542) 1092963498076 Global-Ocean-Sampling_GS-28-01-01-1...    54   0.006  1
(EJ311527) 1095403004024 Global-Ocean-Sampling_GS-27-01-01-1...    54   0.006  1
(EJ232181) 1092404029361 Global-Ocean-Sampling_GS-27-01-01-1...    54   0.006  1
(DH495178) Monosiga ovata DNA, fosmid clone: MOF-058P17, gen...    54   0.006  1
(DH482896) Monosiga ovata DNA, fosmid clone: MOF-037J06, gen...    54   0.006  1
(DH480380) Monosiga ovata DNA, fosmid clone: MOF-033C06, gen...    54   0.006  1
(DH471948) Monosiga ovata DNA, fosmid clone: MOF-018G13, gen...    54   0.006  1
(DE237939) Trifolium pratense DNA, clone:RCG34153.                 54   0.006  1
(DE237740) Trifolium pratense DNA, clone:RCG33758.                 54   0.006  1
(CL953844) OsIRUA004221 Oryza sativa Express Library Oryza s...    54   0.006  1
(CG947644) MBENP12TR mth2 Medicago truncatula genomic clone ...    54   0.006  1
(BZ685299) PUBBC34TD ZM_0.6_1.0_KB Zea mays genomic clone ZM...    54   0.006  1
(BZ676952) PUBBH34TD ZM_0.6_1.0_KB Zea mays genomic clone ZM...    54   0.006  1
(BZ673615) PUBBB09TD ZM_0.6_1.0_KB Zea mays genomic clone ZM...    54   0.006  1
(BZ667212) PUBBG24TD ZM_0.6_1.0_KB Zea mays genomic clone ZM...    54   0.006  1
(EB250097) PEG003-C-032689-501 Normalized Pedal-Pleural Gang...    54   0.006  1
(DY984826) CLSS8111.b1_M11.ab1 CLS(LMS) lettuce sativa Lactu...    54   0.006  1
(DY662038) SC_CP_03_H11 SC_CP Senecio cambrensis cDNA 5', mR...    54   0.006  1
(DV450071) CV02003A2D08.f1 CV02-normalized library Manihot e...    54   0.006  1
(DT758984) EST1192833 Aquilegia cDNA library Aquilegia formo...    54   0.006  1
(DR945697) EST1137236 Aquilegia cDNA library Aquilegia formo...    54   0.006  1
(DR932385) EST1123924 Aquilegia cDNA library Aquilegia formo...    54   0.006  1
(DR915157) EST1106696 Aquilegia cDNA library Aquilegia formo...    54   0.006  1
(DC494472) Monosiga ovata cDNA, clone: MOC-064H05, 3'end.          54   0.006  1
(DC470632) Monosiga ovata cDNA, clone: MOC-030A19, 5'end.          54   0.006  1
(DC458363) Monosiga ovata cDNA, clone: MOC-012D14, 5'end.          54   0.006  1
(DB947958) Manihot esculenta mRNA, clone: CAS01_029_L02, 3'end.    54   0.006  1
(DB939913) Manihot esculenta mRNA, clone: CAS01_004_G06, 3'end.    54   0.006  1
(DB939122) Manihot esculenta mRNA, clone: CAS01_001_P01, 3'end.    54   0.006  1
(CX526709) s13dNF25G09AT072_513930 Aphid-Infected Shoots Med...    54   0.006  1
(CV105487) AGENCOURT_31544685 NIH_MGC_270 Rattus norvegicus ...    54   0.006  1
(CO563147) AGENCOURT_28623036 NIH_MGC_250 Rattus norvegicus ...    54   0.006  1
(CK643687) rni.08.D17.5 MBra685 cassava lambda zap Manihot e...    54   0.006  1
(CK076299) 78497rsicen_21525.y1 Oryza sativa cv. LYP9 bootin...    54   0.006  1
(CI997489) Marsupenaeus japonicus cDNA, clone:YAQ01A01NGRM00...    54   0.006  1
(CB612962) AMGNNUC:CR2-00020-H6-A Colon Rat 2 (10398) Rattus...    54   0.006  1
(CA922819) EST640537 MTUS Medicago truncatula cDNA clone MTU...    54   0.006  1
(C25565) Dictyostelium discoideum slug cDNA, clone SLA429.         54   0.006  1
(BQ592758) E012124-024-028-B06-SP6 MPIZ-ADIS-024-developing ...    54   0.006  1
(BQ592626) S013686-024-028-B06-SP6R MPIZ-ADIS-024-developing...    54   0.006  1
(BJ389085) Dictyostelium discoideum cDNA clone:dds17o11, 5' ...    54   0.006  1
(BJ388843) Dictyostelium discoideum cDNA clone:dds16o11, 5' ...    54   0.006  1
(BJ374789) Dictyostelium discoideum cDNA clone:ddc16e08, 3' ...    54   0.006  1
(BJ362519) Dictyostelium discoideum cDNA clone:ddc22p01, 5' ...    54   0.006  1
(GH610615) G1297P565FI1.T0 C. parvum KSU-1 normalized sporoz...    54   0.006  1
(GH608229) G1297P558FK17.T0 C. parvum KSU-1 normalized sporo...    54   0.006  1
(GH600048) G1297P536FF5.T0 C. parvum KSU-1 normalized sporoz...    54   0.006  1
(GH599757) G1297P537FF11.T0 C. parvum KSU-1 normalized sporo...    54   0.006  1
(GH595963) G1297P530FO17.T0 C. parvum KSU-1 normalized sporo...    54   0.006  1
(GE547908) CCHS6767.b1_M12.ab1 CCHS Espina Barnadesia spinos...    54   0.006  1
(GE547537) CCHS6412.b1_G20.ab1 CCHS Espina Barnadesia spinos...    54   0.006  1
(GE535388) CCHS21969.b1_A21.ab1 CCHS Espina Barnadesia spino...    54   0.006  1
(GD231321) G1045P399RD19.T1 Aplysia californica Pooled Norma...    54   0.006  1
(FL641488) TS05-B10 Reticulitermes flavipes symbiont library...    54   0.006  1
(FG806358) K085D10 Cassava root 210-day-old plants cDNA libr...    54   0.006  1
(FG805027) K093E07 Cassava root 210-day-old plants cDNA libr...    54   0.006  1
(FG147444) AGN_RPC005xg11f1.ab1 AGN_RPC Nicotiana tabacum cD...    54   0.006  1
(FF535090) CASRA18TR CASR Manihot esculenta cDNA 3', mRNA se...    54   0.006  1
(EX851945) CBNC9307.fwd CBNC Phycomyces blakesleeanus NRRL15...    54   0.006  1
(EX851453) CBNC9032.rev CBNC Phycomyces blakesleeanus NRRL15...    54   0.006  1
(EX851080) CBNC8829.rev CBNC Phycomyces blakesleeanus NRRL15...    54   0.006  1
(EX840347) CBNB8401.fwd CBNB Phycomyces blakesleeanus NRRL15...    54   0.006  1
(EX840346) CBNB8401.rev CBNB Phycomyces blakesleeanus NRRL15...    54   0.006  1
(EX819021) CBNA6367.rev CBNA Phycomyces blakesleeanus NRRL15...    54   0.006  1
(EX814997) CBNA4306.rev CBNA Phycomyces blakesleeanus NRRL15...    54   0.006  1
(EX814916) CBNA4267.rev CBNA Phycomyces blakesleeanus NRRL15...    54   0.006  1
(EX814067) CBNA3846.fwd CBNA Phycomyces blakesleeanus NRRL15...    54   0.006  1
(EX810543) CBNA1506.rev CBNA Phycomyces blakesleeanus NRRL15...    54   0.006  1
(EX546335) AIAC-aaa65g02.g1 Ancylostoma_caninum_EST_Male_pSM...    54   0.006  1
(EX539812) AIAC-aaa82e06.g1 Ancylostoma_caninum_EST_Male_pSM...    54   0.006  1
(EW743048) AIAC-aaa03f04.b1 Ancylostoma_caninum_EST_Male_pSM...    54   0.006  1
(CP000082) Psychrobacter arcticus 273-4, complete genome.          54   0.006  1
(CS374589) Sequence 692 from Patent WO2006034879.                  50   0.006  2
(AC184655) Strongylocentrotus purpuratus clone R3-1103F23, W...    42   0.007  3
(DH506192) Monosiga ovata DNA, fosmid clone: MOF-077M16, gen...    46   0.008  2
(DQ191761) Monosiga ovata Hoglet (hoglet) mRNA, complete cds.      46   0.008  2
(AC123513) Dictyostelium discoideum strain AX4 chromosome 2 ...    50   0.009  5
(BJ363857) Dictyostelium discoideum cDNA clone:ddc28h22, 5' ...    46   0.010  2
(AU062112) Dictyostelium discoideum slug cDNA, clone SLH642.       48   0.011  2
(FE789509) CCAG16727.g1 CCAG Petrolisthes cinctipes heart, g...    46   0.012  2
(DC493279) Monosiga ovata cDNA, clone: MOC-062L10, 5'end.          46   0.012  2
(AC109205) Mus musculus chromosome 7, clone RP23-137A4, comp...    50   0.013  3
(AC116956) Dictyostelium discoideum chromosome 2 map 1418423...    48   0.015  8
(AC178173) Strongylocentrotus purpuratus clone R3-3082A20, W...    50   0.018  3
(FM992688) Candida dubliniensis CD36 chromosome 1, complete ...    48   0.019  8
(AC181125) Strongylocentrotus purpuratus clone R3-16I2, WORK...    50   0.019  2
(DE238170) Trifolium pratense DNA, clone:RCG34661.                 38   0.020  3
(AC177620) Strongylocentrotus purpuratus clone R3-1020P15, W...    52   0.022  2
(AC201355) Strongylocentrotus purpuratus clone R3-17B10, WOR...    52   0.022  3
(DE236563) Trifolium pratense DNA, clone:RCG32026.                 38   0.023  3
(CT033772) Mouse DNA sequence from clone RP23-144A16 on chro...    52   0.023  1
(FM992690) Candida dubliniensis CD36 chromosome 3, complete ...    52   0.023  1
(AM270365) Aspergillus niger contig An16c0130, complete genome.    52   0.023  1
(AC156619) Mus musculus chromosome 5 clone RP23-1J16 map 5, ...    52   0.023  1
(AC133222) Rattus norvegicus clone CH230-51P20, WORKING DRAF...    52   0.023  1
(AC127156) Rattus norvegicus clone CH230-7B10, *** SEQUENCIN...    52   0.023  1
(AC115510) Rattus norvegicus clone CH230-383C9, *** SEQUENCI...    52   0.023  1
(AC112086) Rattus norvegicus clone CH230-332D11, *** SEQUENC...    52   0.023  1
(AC097434) Rattus norvegicus clone CH230-205A20, WORKING DRA...    52   0.023  1
(AC094593) Rattus norvegicus clone CH230-4D11, *** SEQUENCIN...    52   0.023  1
(AC079476) Mus musculus clone RP23-140I12, WORKING DRAFT SEQ...    52   0.023  1
(AC201600) Strongylocentrotus purpuratus clone R3-50C18, WOR...    52   0.023  1
(AC201345) Strongylocentrotus purpuratus clone R3-16P15, WOR...    52   0.023  1
(AC181168) Strongylocentrotus purpuratus clone R3-16A17, WOR...    52   0.023  1
(AC181081) Strongylocentrotus purpuratus clone R3-3048G17, W...    52   0.023  1
(AC178964) Strongylocentrotus purpuratus clone R3-3121O21, W...    52   0.023  1
(AC176807) Strongylocentrotus purpuratus clone R3-3109G05, W...    52   0.023  1
(AC174135) Strongylocentrotus purpuratus clone R3-1004A20, W...    52   0.023  1
(AC016018) Mus musculus strain C57BL6/J clone RP23-33E5, WOR...    52   0.023  1
(AQ935615) CpG2561B CpIOWAgDNA1 Cryptosporidium parvum genom...    52   0.023  1
(EJ895086) 1093018463421 Global-Ocean-Sampling_GS-30-02-01-1...    52   0.023  1
(EJ824400) 1093017553441 Global-Ocean-Sampling_GS-30-02-01-1...    52   0.023  1
(AL397918) T7 end of clone AS0AA005H10 of library AS0AA from...    52   0.023  1
(AL327738) Tetraodon nigroviridis genome survey sequence SP6...    52   0.023  1
(CG388057) ZMMBBc0568D01f ZMMBBc Zea mays subsp. mays genomi...    52   0.023  1
(BX984535) Reverse strand read from insert in 5'HPRT inserti...    52   0.023  1
(BX957730) Reverse strand read from insert in 5'HPRT inserti...    52   0.023  1
(EB762892) LM6-3 LM Leptosphaeria maculans cDNA, mRNA sequence.    52   0.023  1
(DN572582) 92243685 Sea Urchin primary mesenchyme cell cDNA ...    52   0.023  1
(EW968114) LS_14_I16_T7 Headlice composite library with all ...    52   0.023  1
(AM453413) Vitis vinifera contig VV78X092502.11, whole genom...    46   0.025  2
(DH497522) Monosiga ovata DNA, fosmid clone: MOF-063B14, gen...    44   0.028  2
(AC156447) Volvox carteri clone JGIAOBO-33C7, complete seque...    50   0.030  2
(AC176994) Strongylocentrotus purpuratus clone R3-1103A15, W...    46   0.031  2
(AC201614) Strongylocentrotus purpuratus clone R3-63M22, WOR...    40   0.037  4
(CZ629447) OM__Ba0170A23.r OM__Ba Oryza minuta genomic clone...    44   0.037  2
(DH474263) Monosiga ovata DNA, fosmid clone: MOF-022H11, gen...    42   0.042  2
(CR165209) Forward strand read from insert in 5'HPRT inserti...    46   0.042  2
(CR049178) Forward strand read from insert in 5'HPRT inserti...    46   0.048  2
(DT750689) EST1184538 Aquilegia cDNA library Aquilegia formo...    42   0.049  2
(AM411451) Plasmodium falciparum var13.1, var13.2 and partia...    46   0.051  3
(AC117081) Dictyostelium discoideum chromosome 2 map 5862124...    38   0.053  6
(AC178739) Strongylocentrotus purpuratus clone R3-13L20, WOR...    34   0.056  2
(AC176329) Strongylocentrotus purpuratus clone R3-3012D18, W...    44   0.056  2
(AC168402) Strongylocentrotus purpuratus clone R3-4002I3, WO...    48   0.056  2
(AC174194) Strongylocentrotus purpuratus clone R3-16A6, WORK...    48   0.056  2
(AC157834) Strongylocentrotus purpuratus clone R3-4002I3, WO...    48   0.056  2
(FE792642) CCAG18867.b1 CCAG Petrolisthes cinctipes heart, g...    30   0.057  4
(AL669989) Neurospora crassa DNA linkage group II BAC clone ...    50   0.057  2
(BQ622552) fch1c.pk004.d13 Conidiobolus cornatus ARSEF 512 C...    34   0.061  3
(AB017910) Dictyostelium discoideum myoM gene, complete cds.       40   0.065  2
(AF396747) Ictalurus punctatus myostatin gene, complete cds.       46   0.065  2
(AF090533) Dictyostelium discoideum unconventional myosin he...    40   0.065  2
(FM992689) Candida dubliniensis CD36 chromosome 2, complete ...    46   0.068  12
(EA072603) Sequence 30 from patent US 7183079.                     46   0.069  2
(FM172073) Oryzias latipes EST, clone m006--G7_053.                48   0.073  2
(CC037692) 3591_1_89_1_E07.2EL_x_1 3591 - RescueMu Grid P Ze...    36   0.074  2
(AC175942) Strongylocentrotus purpuratus clone R3-17B22, WOR...    50   0.074  2
(AC181221) Strongylocentrotus purpuratus clone R3-4009C07, W...    50   0.074  3
(AP005292) Oryza sativa Japonica Group genomic DNA, chromoso...    36   0.076  7
(FG357414) RM_G_00090 Eriocheir sinensis hepatopancreas cDNA...    42   0.085  2
(DQ481664) Takifugu rubripes HoxAb gene cluster, complete se...    50   0.090  1
(CR394537) Zebrafish DNA sequence from clone CH211-119D19 in...    50   0.090  1
(BV004411) S208P6640RH3.T0 129S1/SvImJ Mus musculus STS geno...    50   0.090  1
(CT030231) Mouse DNA sequence from clone RP24-331M15 on chro...    50   0.090  1
(CT009711) Mouse DNA sequence from clone RP23-128L22 on chro...    50   0.090  1
(AL844177) Mouse DNA sequence from clone RP23-414O19 on chro...    50   0.090  1
(AL833806) Mouse DNA sequence from clone RP23-425H11 on chro...    50   0.090  1
(AL683845) Mouse DNA sequence from clone RP23-423B1 on chrom...    50   0.090  1
(AJ421479) Mus musculus X-inactivation center region; segmen...    50   0.090  1
(AF287263) Mus musculus ATP-binding cassette 1, sub-family A...    50   0.090  1
(AC154204) Mus musculus BAC clone RP24-393D5 from chromosome...    50   0.090  1
(AC130711) Mus musculus BAC clone RP23-22M24 from chromosome...    50   0.090  1
(AC121095) Mus musculus chromosome 14, clone RP24-324H17, co...    50   0.090  1
(AC107822) Mus musculus chromosome 7, clone RP23-182C11, com...    50   0.090  1
(AC102608) Mus musculus chromosome 3, clone RP23-402L6, comp...    50   0.090  1
(EU328294) Schiedea adamantis microsatellite SA31 sequence.        50   0.090  1
(EU094829) Humulus lupulus clone ACC3-I1-8 microsatellite se...    50   0.090  1
(AP008207) Oryza sativa (japonica cultivar-group) genomic DN...    50   0.090  1
(AP003241) Oryza sativa Japonica Group genomic DNA, chromoso...    50   0.090  1
(AM484291) Vitis vinifera contig VV78X242163.7, whole genome...    50   0.090  1
(AM446308) Vitis vinifera, whole genome shotgun sequence, co...    50   0.090  1
(AL669988) Neurospora crassa DNA linkage group II BAC contig...    50   0.090  1
(EA703412) Sequence 82291 from patent US 7365185.                  50   0.090  1
(AR553641) Sequence 8772 from patent US 6747137.                   50   0.090  1
(AR545847) Sequence 978 from patent US 6747137.                    50   0.090  1
(AM494964) Leishmania braziliensis chromosome 27.                  50   0.090  1
(AM494957) Leishmania braziliensis chromosome 20.                  50   0.090  1
(AC171131) Helobdella robusta clone CH306-1A2, complete sequ...    50   0.090  1
(AC171127) Helobdella robusta clone CH306-1A1, complete sequ...    50   0.090  1
(AC117070) Dictyostelium discoideum chromosome 2 map 2097701...    50   0.090  1
(AC116305) Dictyostelium discoideum chromosome 2 map 1005175...    50   0.090  1
(AC115683) Dictyostelium discoideum chromosome 2 map complem...    50   0.090  1
(AC150001) Strongylocentrotus purpuratus clone R3-60F6, WORK...    50   0.090  1
(AC137335) Rattus norvegicus clone CH230-unknown, *** SEQUEN...    50   0.090  1
(AC137159) Rattus norvegicus clone CH230-unknown, *** SEQUEN...    50   0.090  1
(AC132520) Rattus norvegicus clone CH230-42D1, *** SEQUENCIN...    50   0.090  1
(AC132496) Rattus norvegicus clone CH230-374P21, *** SEQUENC...    50   0.090  1
(AC129041) Rattus norvegicus clone CH230-106J6, *** SEQUENCI...    50   0.090  1
(AC126063) Rattus norvegicus clone CH230-11C10, *** SEQUENCI...    50   0.090  1
(AC120790) Mus musculus clone RP23-459J7, LOW-PASS SEQUENCE ...    50   0.090  1
(AC119818) Mus musculus clone RP23-104A22, *** SEQUENCING IN...    50   0.090  1
(AC113111) Mus musculus clone RP23-329J1, WORKING DRAFT SEQU...    50   0.090  1
(AC111324) Rattus norvegicus clone CH230-241B12, WORKING DRA...    50   0.090  1
(AC110633) Rattus norvegicus clone CH230-262J17, *** SEQUENC...    50   0.090  1
(AC107525) Rattus norvegicus clone CH230-123I24, *** SEQUENC...    50   0.090  1
(AC103230) Rattus norvegicus clone CH230-226D16, *** SEQUENC...    50   0.090  1
(AC097207) Rattus norvegicus clone CH230-42K23, *** SEQUENCI...    50   0.090  1
(DQ273271) Asparagus officinalis clone B4-L7-94, *** SEQUENC...    50   0.090  1
(CU694605) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f...    50   0.090  1
(AC091323) Mus musculus chromosome 17 clone RP23-333E5 map 1...    50   0.090  1
(AC234386) Monodelphis domestica clone VMRC18-55A20, WORKING...    50   0.090  1
(AC206753) Zea mays chromosome 2 clone ZMMBBb-566G2; ZMMBBb0...    50   0.090  1
(AC201609) Strongylocentrotus purpuratus clone R3-5N23, WORK...    50   0.090  1
(AC181799) Strongylocentrotus purpuratus clone R3-1027M19, W...    50   0.090  1
(AC181638) Strongylocentrotus purpuratus clone R3-1103M24, W...    50   0.090  1
(AC181624) Strongylocentrotus purpuratus clone R3-1105J9, WO...    50   0.090  1
(AC181517) Strongylocentrotus purpuratus clone R3-1111B8, WO...    50   0.090  1
(AC181424) Strongylocentrotus purpuratus clone R3-50F13, WOR...    50   0.090  1
(AC181241) Strongylocentrotus purpuratus clone R3-4010K23, W...    50   0.090  1
(AC179981) Strongylocentrotus purpuratus clone R3-18H5, WORK...    50   0.090  1
(AC179811) Strongylocentrotus purpuratus clone R3-1013K2, WO...    50   0.090  1
(AC179606) Strongylocentrotus purpuratus clone R3-1028P05, W...    50   0.090  1
(AC179360) Strongylocentrotus purpuratus clone R3-59G20, WOR...    50   0.090  1
(AC179357) Strongylocentrotus purpuratus clone R3-59F5, WORK...    50   0.090  1
(AC179107) Strongylocentrotus purpuratus clone R3-4011E22, W...    50   0.090  1
(AC178708) Strongylocentrotus purpuratus clone R3-12J4, WORK...    50   0.090  1
(AC178631) Strongylocentrotus purpuratus clone R3-3013K12, W...    50   0.090  1
(AC178592) Strongylocentrotus purpuratus clone R3-113N07, WO...    50   0.090  1
(AC178390) Strongylocentrotus purpuratus clone R3-3107O18, W...    50   0.090  1
(AC178285) Strongylocentrotus purpuratus clone R3-3094B04, W...    50   0.090  1
(AC178223) Strongylocentrotus purpuratus clone R3-3085M04, W...    50   0.090  1
(AC177698) Strongylocentrotus purpuratus clone R3-1011O24, W...    50   0.090  1
(AC177383) Strongylocentrotus purpuratus clone R3-1031L21, W...    50   0.090  1
(AC177304) Strongylocentrotus purpuratus clone R3-1033E17, W...    50   0.090  1
(AC177032) Strongylocentrotus purpuratus clone R3-38D6, WORK...    50   0.090  1
(AC176866) Strongylocentrotus purpuratus clone R3-31B19, WOR...    50   0.090  1
(AC176653) Strongylocentrotus purpuratus clone R3-3080P17, W...    50   0.090  1
(AC176559) Strongylocentrotus purpuratus clone R3-3076H3, WO...    50   0.090  1
(AC176229) Strongylocentrotus purpuratus clone R3-3063A10, W...    50   0.090  1
(AC176213) Strongylocentrotus purpuratus clone R3-3063M10, W...    50   0.090  1
(AC175951) Strongylocentrotus purpuratus clone R3-17D17, WOR...    50   0.090  1
(AC174882) Strongylocentrotus purpuratus clone R3-1113G17, W...    50   0.090  1
(AC174734) Strongylocentrotus purpuratus clone R3-1115F23, W...    50   0.090  1
(AC168595) Strongylocentrotus purpuratus clone R3-3056E4, WO...    50   0.090  1
(AC166000) Callithrix jacchus clone CH259-210B18, WORKING DR...    50   0.090  1
(AK275998) Gryllus bimaculatus mRNA, GBcontig22859.                50   0.090  1
(AZ127274) OSJNBb0084H14r CUGI Rice BAC Library (EcoRI) Oryz...    50   0.090  1
(EK933369) 1093018288720 Global-Ocean-Sampling_GS-33-01-01-1...    50   0.090  1
(EK598898) 1092344271396 Global-Ocean-Sampling_GS-33-01-01-1...    50   0.090  1
(EK512161) 1095515483397 Global-Ocean-Sampling_GS-32-01-01-1...    50   0.090  1
(AQ003585) CpG0269B CpIOWAgDNA1 Cryptosporidium parvum genom...    50   0.090  1
(DX992928) CHORI103-15E5.TJ CHORI103 Schistosoma mansoni gen...    50   0.090  1
(DX871512) ZMMBLf0001F18.f ZMMBLf Zea mays genomic clone ZMM...    50   0.090  1
(DU626987) OO__Ba0133J24.f OO__Ba Oryza officinalis genomic ...    50   0.090  1
(DH504528) Monosiga ovata DNA, fosmid clone: MOF-075A17, gen...    50   0.090  1
(DH496954) Monosiga ovata DNA, fosmid clone: MOF-062A15, gen...    50   0.090  1
(DH496723) Monosiga ovata DNA, fosmid clone: MOF-061J24, gen...    50   0.090  1
(DH490983) Monosiga ovata DNA, fosmid clone: MOF-051F21, gen...    50   0.090  1
(DH487787) Monosiga ovata DNA, fosmid clone: MOF-045N10, gen...    50   0.090  1
(DH484117) Monosiga ovata DNA, fosmid clone: MOF-039K12, gen...    50   0.090  1
(DH463453) Monosiga ovata DNA, fosmid clone: MOF-003H03, gen...    50   0.090  1
(DE242597) Trifolium pratense DNA, clone:RCG48763.                 50   0.090  1
(DE238033) Trifolium pratense DNA, clone:RCG34372.                 50   0.090  1
(DE237805) Trifolium pratense DNA, clone:RCG33885.                 50   0.090  1
(DE237560) Trifolium pratense DNA, clone:RCG33488.                 50   0.090  1
(DE229453) Trifolium pratense DNA, clone:RCG22583.                 50   0.090  1
(CW428459) fsbb001f141c17k0 Sorghum methylation filtered lib...    50   0.090  1
(CW379116) fsbb001f058d12f0 Sorghum methylation filtered lib...    50   0.090  1
(CG745168) P038-1-A06.za Ppa EcoRI BAC Library Pristionchus ...    50   0.090  1
(CE306120) tigr-gss-dog-17000360539244 Dog Library Canis lup...    50   0.090  1
(B88570) CpG0129B CpIOWAgDNA1 Cryptosporidium parvum genomic...    50   0.090  1
(BX545613) Leishmania braziliensis GSS, clone LBAF052E07.          50   0.090  1
(BX544602) Leishmania braziliensis GSS, clone LBAF068E12.          50   0.090  1
(BX544347) Leishmania braziliensis GSS, clone LBAF070G03.          50   0.090  1
(EC853303) HDE00001292 Hyperamoeba dachnaya Non-normalized (...    50   0.090  1
(DY663649) SC_CP_07_E09 SC_CP Senecio cambrensis cDNA 5', mR...    50   0.090  1
(DC494471) Monosiga ovata cDNA, clone: MOC-064H05, 5'end.          50   0.090  1
(AU073063) Dictyostelium discoideum slug cDNA, clone SSF855.       50   0.090  1
(AU061406) Dictyostelium discoideum slug cDNA, clone SLE128.       50   0.090  1
(AU052991) Dictyostelium discoideum slug cDNA, clone SLF463.       50   0.090  1
(AU034579) Dictyostelium discoideum slug cDNA, clone SLC513.       50   0.090  1
(CX301439) C08009G02SK PhyRootSr1 Citrus aurantium cDNA clon...    50   0.090  1
(AM388898) Brassica oleracea var. alboglabra EST, clone  AAF...    50   0.090  1
(C23751) Dictyostelium discoideum gamete cDNA, clone FC-AE17.      50   0.090  1
(BM169307) EST571830 PyBS Plasmodium yoelii yoelii cDNA clon...    50   0.090  1
(BM166319) EST568842 PyBS Plasmodium yoelii yoelii cDNA clon...    50   0.090  1
(BM164357) EST566880 PyBS Plasmodium yoelii yoelii cDNA clon...    50   0.090  1
(BM162778) EST565290 PyBS Plasmodium yoelii yoelii cDNA clon...    50   0.090  1
(BJ431126) Dictyostelium discoideum cDNA clone:ddv9o23, 3' e...    50   0.090  1

>(BJ326409) Dictyostelium discoideum cDNA clone:dda16j10, 5' end,
           single read.
          Length = 551

 Score =  878 bits (443), Expect(2) = 0.0
 Identities = 443/443 (100%)
 Strand = Plus / Plus


Query: 1   gtagtttatcaagtagtgttggtagtattggttcaggtggtggtggtggttcaccaaaat 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   gtagtttatcaagtagtgttggtagtattggttcaggtggtggtggtggttcaccaaaat 60


Query: 61  tatctagaaaacataaatcaacaacaaatattacaaattatttgactactagtggtgagc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  tatctagaaaacataaatcaacaacaaatattacaaattatttgactactagtggtgagc 120


Query: 121 aaaaattattttcatcaaatggcgacccaacgataaatcaatcatgtccaacatcaatta 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 aaaaattattttcatcaaatggcgacccaacgataaatcaatcatgtccaacatcaatta 180


Query: 181 ccaatacaaattataatgttaataaaaagacatcaagaccaccatcaccttcaccttcac 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ccaatacaaattataatgttaataaaaagacatcaagaccaccatcaccttcaccttcac 240


Query: 241 catctccttcaaaagaaaggattgtggaagttcaacaaaatttattaaatattcctgata 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 catctccttcaaaagaaaggattgtggaagttcaacaaaatttattaaatattcctgata 300


Query: 301 ataaaatcgtctcaatcaatagaaaaaatagtattgaatcgaaatcaagtagtatttgtg 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ataaaatcgtctcaatcaatagaaaaaatagtattgaatcgaaatcaagtagtatttgtg 360


Query: 361 ccactttaaatagtagtaaatttattgacgatggtaattcaaaaaattgtgaatcctctg 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ccactttaaatagtagtaaatttattgacgatggtaattcaaaaaattgtgaatcctctg 420


Query: 421 atattctatcaacttcttcttca 443
           |||||||||||||||||||||||
Sbjct: 421 atattctatcaacttcttcttca 443

 Score = 97.6 bits (49), Expect(2) = 0.0
 Identities = 49/49 (100%)
 Strand = Plus / Plus


Query: 502 cttccacaagtaatagttgtactagtggtagtggtagtggtagtggtag 550
           |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 502 cttccacaagtaatagttgtactagtggtagtggtagtggtagtggtag 550

 Score = 44.1 bits (22), Expect = 5.5
 Identities = 22/22 (100%)
 Strand = Plus / Plus


Query: 524 tagtggtagtggtagtggtagt 545
           ||||||||||||||||||||||
Sbjct: 530 tagtggtagtggtagtggtagt 551

Lambda     K      H
    1.37    0.711     1.31

Matrix: blastn matrix:1 -3
Number of Sequences: 102105510
Number of Hits to DB: 724,136,169
Number of extensions: 48900953
Number of successful extensions: 5480880
Number of sequences better than 10.0: 1766
Length of query: 550
Length of database: 101,790,757,118
Length adjustment: 23
Effective length of query: 527
Effective length of database: 99,442,330,388
Effective search space: 52406108114476
Effective search space used: 52406108114476
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)
protein update 2009. 7.21
Homology vs Protein 
Query= Contig-U02748-1 (Contig-U02748-1Q) /CSM_Contig/Contig-U02748-1Q.Seq.d
         (550 letters)

Database: nrp_B
           3,236,559 sequences; 1,051,180,864 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC116984_26(AC116984|pid:none) Dictyostelium discoideum chromoso...   211   1e-53
AC115584_20(AC115584|pid:none) Dictyostelium discoideum chromoso...    32   8.2
AY220914_1(AY220914|pid:none) Dictyostelium discoideum ComB (com...    32   8.2

>AC116984_26(AC116984|pid:none) Dictyostelium discoideum chromosome
           2 map 2567470-3108875 strain AX4, complete sequence.
          Length = 1565

 Score =  211 bits (537), Expect = 1e-53
 Identities = 107/120 (89%), Positives = 107/120 (89%)
 Frame = +3

Query: 54  PKLSRKHKSTTNITNYLTTSGEQKLFSSNGDPTINQSCPTSITNTNYNVNKKTXXXXXXX 233
           PKLSRKHKSTTNITNYLTTSGEQKLFSSNGDPTINQSCPTSITNTNYNVNKKT
Sbjct: 485 PKLSRKHKSTTNITNYLTTSGEQKLFSSNGDPTINQSCPTSITNTNYNVNKKTSRPPSPS 544

Query: 234 XXXXXXKERIVEVQQNLLNIPDNKIVSINRKNSIESKSSSICATLNSSKFIDDGNSKNCE 413
                 KERIVEVQQNLLNIPDNKIVSINRKNSIESKSSSICATLNSSKFIDDGNSKNCE
Sbjct: 545 PSPSPSKERIVEVQQNLLNIPDNKIVSINRKNSIESKSSSICATLNSSKFIDDGNSKNCE 604

Lambda     K      H
   0.318    0.134    0.401

Gapped
Lambda     K      H
   0.267   0.0410    0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3236559
Number of Hits to DB: 462,439,987
Number of extensions: 5733147
Number of successful extensions: 11749
Number of sequences better than 10.0: 3
Number of HSP's gapped: 11740
Number of HSP's successfully gapped: 3
Length of query: 183
Length of database: 1,051,180,864
Length adjustment: 121
Effective length of query: 62
Effective length of database: 659,557,225
Effective search space: 40892547950
Effective search space used: 40892547950
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 30 (16.2 bits)
PSORT 

 psg: 0.88  gvh: 0.49  alm: 0.56  top: 0.77  tms: 0.00  mit: 0.31  mip: 0.05
 nuc: 0.02  erl: 0.00  erm: 0.00  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 1.00 

	 36.0 %: mitochondrial
	 24.0 %: cytoplasmic
	 16.0 %: nuclear
	 12.0 %: cytoskeletal
	  8.0 %: plasma membrane
	  4.0 %: endoplasmic reticulum

>> prediction for Contig-U02748-1 is mit
VS (DIR, S) 0
VH (FL, L) 0
VF (FL, S) 0
AH (FL, L) 0
AF (FL, S) 1
SL (DIR, L) 0
SS (DIR, S) 0
SH (FL, L) 0
SF (FL, S) 0
CH (FL, L) 0
CF (FL, S) 0
FCL (DIR, L) 0
FC (DIR, S) 0
FC-IC (SUB) 0