Contig-U14571-1 |
Contig ID |
Contig-U14571-1 |
Contig update |
2002.12.18 |
Contig sequence |
|
Gap |
no gap |
Contig length |
470 |
Chromosome number (1..6, M) |
4 |
Chromosome length |
5430582 |
Start point |
5165778 |
End point |
5165338 |
Strand (PLUS/MINUS) |
MINUS |
Number of clones |
1 |
Number of EST |
1 |
Link to clone list |
U14571 |
List of clone(s) |
|
Translated Amino Acid sequence |
|
Translated Amino Acid sequence (All Frames) |
|
own update |
2004. 6.10 |
Homology vs CSM-cDNA |
|
dna update |
2008.12.25 |
Homology vs DNA |
Query= Contig-U14571-1 (Contig-U14571-1Q) /CSM_Contig/Contig-U14571-1Q.Seq.d (470 letters)
Database: ddbj_A 92,845,959 sequences; 95,242,211,685 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value N
(BJ393380) Dictyostelium discoideum cDNA clone:dds31j06, 5' ... 829 0.0 2 (AL162503) Human DNA sequence from clone RP11-420F12 on chro... 44 0.062 3 (AL844887) Zebrafish DNA sequence from clone DKEY-66C10. 42 0.068 6 (AC173260) Bos taurus clone CH240-126N8, WORKING DRAFT SEQUE... 50 0.071 1 (AC173010) Bos taurus clone CH240-203M13, WORKING DRAFT SEQU... 50 0.071 1 (CJ463730) Macaca fascicularis mRNA, clone: QnpA-12159, 5' e... 40 0.12 2 (AL160056) Human DNA sequence from clone RP11-239F3 on chrom... 38 0.17 2 (AC073463) Homo sapiens chromosome 1 clone RP11-112D11, WORK... 38 0.17 2 (AC199118) Zea mays chromosome 8 clone CH201-240G2; ZMMBBc02... 42 0.20 3 (AL031683) Human DNA sequence from clone RP5-881E24 on chrom... 46 0.26 4 (FG081512) UI-FF-IH0-aax-e-01-0-UI.r1 Ceratitis capitata adu... 48 0.28 1 (CP000102) Methanosphaera stadtmanae DSM 3091, complete genome. 36 0.29 14 (BX649294) Zebrafish DNA sequence from clone CH211-223C9 in ... 34 0.35 6 (CU693389) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 38 0.36 4 (BJ362969) Dictyostelium discoideum cDNA clone:ddc24j09, 5' ... 40 0.41 2 (EJ722801) 1092959462842 Global-Ocean-Sampling_GS-30-02-01-1... 32 0.44 3 (AC138048) Canis familiaris clone RP81-105O8, WORKING DRAFT ... 36 0.45 3 (AC117176) Dictyostelium discoideum chromosome 2 map 5018074... 34 0.45 8 (CJ446789) Macaca fascicularis mRNA, clone: QflA-12091, 5' e... 40 0.46 2 (CJ443626) Macaca fascicularis mRNA, clone: QccE-21190, 5' e... 38 0.48 2 (EJ709603) 1092956069432 Global-Ocean-Sampling_GS-30-02-01-1... 32 0.52 3 (CU861503) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 40 0.77 4 (AW101165) sd74h11.y1 Gm-c1008 Glycine max cDNA clone GENOME... 36 0.81 2 (BJ326591) Dictyostelium discoideum cDNA clone:dda17j04, 5' ... 38 1.1 2 (BX649552) Zebrafish DNA sequence from clone CH211-91I13 in ... 34 1.1 5 (AL691464) Human DNA sequence from clone RP4-644F6 on chromo... 46 1.1 1 (AL355818) Human DNA sequence from clone RP4-667C9 on chromo... 46 1.1 1 (CL128436) ISB1-94H11_T7.1 ISB1 Xenopus (Silurana) tropicali... 46 1.1 1 (CP001080) Sulfurihydrogenibium sp. YO3AOP1, complete genome. 46 1.1 1 (CR382401) Plasmodium falciparum chromosome 6, complete sequ... 34 1.2 9 (AC208429) Zea mays chromosome 1 clone CH201-261I14; ZMMBBc0... 42 1.2 2 (CT485785) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 40 1.4 5 (CU862014) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 36 1.4 4 (CU467567) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 36 1.4 4 (AC181760) Strongylocentrotus purpuratus clone R3-1036I16, W... 32 1.5 8 (CJ452769) Macaca fascicularis mRNA, clone: QflA-18439, 5' e... 40 1.6 2 (CJ459430) Macaca fascicularis mRNA, clone: QmoA-11645, 5' e... 36 1.6 2 (CJ454187) Macaca fascicularis mRNA, clone: QflA-19918, 5' e... 40 1.7 2 (CJ461795) Macaca fascicularis mRNA, clone: QmoA-14778, 5' e... 38 1.7 2 (CJ461611) Macaca fascicularis mRNA, clone: QmoA-14567, 5' e... 34 1.7 2 (CJ489661) Macaca fascicularis mRNA, clone: QtsA-17422, 5' e... 38 1.7 2 (CT033812) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 32 1.9 6 (AC172144) Bos taurus clone CH240-306K22, WORKING DRAFT SEQU... 42 2.1 5 (BX571758) Zebrafish DNA sequence from clone CH211-34K1 in l... 34 2.1 6 (CT573296) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 34 2.2 2 (AC153067) Bos taurus clone CH240-13J2, *** SEQUENCING IN PR... 32 2.2 2 (AC226343) Zea mays chromosome 5 clone CH201-189P20; ZMMBBc0... 36 2.2 3 (AC223959) Bos taurus clone CH240-453I23, WORKING DRAFT SEQU... 32 2.2 2 (AL929338) Zebrafish DNA sequence from clone CH211-139G18 in... 34 2.2 2 (AL935046) Zebrafish DNA sequence from clone CH211-171K3. 34 2.2 2 (BX005321) Zebrafish DNA sequence from clone CH211-189E2 in ... 34 2.2 2 (AC114263) Dictyostelium discoideum chromosome 2 map 215673-... 32 2.3 7 (CU915388) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 34 2.5 6 (CU694752) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 44 2.5 4 (AP009321) Solanum lycopersicum genomic DNA, chromosome 8, c... 38 2.7 2 (AM442211) Vitis vinifera contig VV78X010838.4, whole genome... 44 2.7 2 (AC216656) Solanum lycopersicum chromosome 6 clone C06SLe001... 36 3.0 4 (AC174289) Medicago truncatula clone mth2-36f19, WORKING DRA... 36 3.3 4 (AC006798) Caenorhabditis elegans clone Y51F8, *** SEQUENCIN... 44 3.5 4 (BX470265) Zebrafish DNA sequence from clone CH211-87A14 in ... 34 3.5 7 (CI034579) Oryza sativa Japonica Group cDNA, clone: 009-M124... 40 3.6 2 (BI073855) kt35h07.y1 Strongyloides ratti L2 pAMP1 v1 Chiape... 38 3.6 2 (BI323081) kt61b09.y1 Strongyloides ratti L2 pAMP1 v1 Chiape... 38 3.7 2 (BJ362958) Dictyostelium discoideum cDNA clone:ddc24f09, 5' ... 36 3.7 2 (BI323265) kt69a06.y1 Strongyloides ratti L2 pAMP1 v1 Chiape... 38 3.8 2 (BI323420) kt71a12.y1 Strongyloides ratti L2 pAMP1 v1 Chiape... 38 3.8 2 (CI034625) Oryza sativa Japonica Group cDNA, clone: 009-M125... 40 3.8 2 (BE579095) kq22c05.y1 TBN95TM-SSR Strongyloides stercoralis ... 38 3.9 2 (CI018921) Oryza sativa Japonica Group cDNA, clone: 007-M047... 40 4.0 2 (BJ390582) Dictyostelium discoideum cDNA clone:dds22o24, 5' ... 40 4.0 2 (CR339043) Zebrafish DNA sequence from clone CH211-154I8 in ... 34 4.1 5 (AX356467) Sequence 101 from Patent WO0181622. 32 4.1 4 (AX346832) Sequence 1903 from Patent WO0200928. 32 4.1 4 (CI035103) Oryza sativa Japonica Group cDNA, clone: 009-M131... 40 4.3 2 (CI025196) Oryza sativa Japonica Group cDNA, clone: 009-M015... 40 4.3 2 (G07687) human STS SHGC-8899 clone pG-4663, sequence tagged ... 44 4.4 1 (BV175857) sqnm84568 Human DNA (Sequenom) Homo sapiens STS g... 44 4.4 1 (AC195643) Pan troglodytes BAC clone CH251-328O14 from chrom... 44 4.4 1 (AC163758) Pan troglodytes BAC clone CH251-221N15 from chrom... 44 4.4 1 (AM486466) Vitis vinifera contig VV78X225292.2, whole genome... 44 4.4 1 (AM468578) Vitis vinifera, whole genome shotgun sequence, co... 44 4.4 1 (AM443787) Vitis vinifera contig VV78X115044.11, whole genom... 44 4.4 1 (AM432597) Vitis vinifera contig VV78X204232.4, whole genome... 44 4.4 1 (AC025721) Caenorhabditis elegans cosmid Y48G8AL, complete s... 44 4.4 1 (AY340073) Homo sapiens glutamate decarboxylase 2 (pancreati... 44 4.4 1 (AL513422) Homo sapiens chromosome 9 BAC RP11-527D15. 44 4.4 1 (AL137851) Human DNA sequence from clone RP11-6H18 on chromo... 44 4.4 1 (AL035603) Human DNA sequence from clone RP1-179E13 on chrom... 44 4.4 1 (AC007130) Homo sapiens BAC clone GS1-98E2 from 7, complete ... 44 4.4 1 (AC006158) Homo sapiens BAC clone RP11-441G8 from Y, complet... 44 4.4 1 (AC006156) Homo sapiens BAC clone RP11-344D2 from Y, complet... 44 4.4 1 (AC128330) Rattus norvegicus clone CH230-212F6, WORKING DRAF... 44 4.4 1 (AC120961) Rattus norvegicus clone CH230-11F17, *** SEQUENCI... 44 4.4 1 (AC096190) Rattus norvegicus clone CH230-53J4, *** SEQUENCIN... 44 4.4 1 (AC079260) Homo sapiens chromosome RPCI-11 clone RP11-580L6,... 44 4.4 1 (AC073187) Homo sapiens chromosome Y clone RP11-71C4, WORKIN... 44 4.4 1 (AC046193) Homo sapiens chromosome 2 clone RP11-169G13 map 2... 44 4.4 1 (CU467682) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 44 4.4 1 (CU462951) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 44 4.4 1 (AL591717) Human DNA sequence *** SEQUENCING IN PROGRESS ***... 44 4.4 1
>(BJ393380) Dictyostelium discoideum cDNA clone:dds31j06, 5' end, single read. Length = 461
Score = 829 bits (418), Expect(2) = 0.0 Identities = 418/418 (100%) Strand = Plus / Plus
Query: 44 gtttataataaacaacagttttgtatagatggatagtagatgtggagtttgtaaatatat 103 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44 gtttataataaacaacagttttgtatagatggatagtagatgtggagtttgtaaatatat 103
Query: 104 aataagtgattgtgaaagatatgtttcagataatactttttatcatgtgaaatgttttat 163 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104 aataagtgattgtgaaagatatgtttcagataatactttttatcatgtgaaatgttttat 163
Query: 164 atgtaaaatatgtaaatgtgaattaacaacttgttttagaggaaaagatggaagtttaat 223 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 164 atgtaaaatatgtaaatgtgaattaacaacttgttttagaggaaaagatggaagtttaat 223
Query: 224 gtgtggtgattgtgaaattaaattaaatgcaccaaaatgttttaaatgtcatttaccaat 283 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 224 gtgtggtgattgtgaaattaaattaaatgcaccaaaatgttttaaatgtcatttaccaat 283
Query: 284 tcaatcagtttcagttgtagcacgtaataaagaatttcataataattgttttacgtgtat 343 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 284 tcaatcagtttcagttgtagcacgtaataaagaatttcataataattgttttacgtgtat 343
Query: 344 ttcttgtaatgaaattataaagggtgggtttcaatattcagatgaacttttttattgttc 403 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 344 ttcttgtaatgaaattataaagggtgggtttcaatattcagatgaacttttttattgttc 403
Query: 404 aaaatgtgatattattaaacctcctcccctaccaccaccattaatatataaagcacca 461 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 404 aaaatgtgatattattaaacctcctcccctaccaccaccattaatatataaagcacca 461
Score = 40.1 bits (20), Expect(2) = 0.0 Identities = 20/20 (100%) Strand = Plus / Plus
Query: 1 cactgttggcctactggtat 20 |||||||||||||||||||| Sbjct: 1 cactgttggcctactggtat 20
Lambda K H 1.37 0.711 1.31
Matrix: blastn matrix:1 -3 Number of Sequences: 92845959 Number of Hits to DB: 634,207,087 Number of extensions: 41352094 Number of successful extensions: 3774426 Number of sequences better than 10.0: 211 Length of query: 470 Length of database: 95,242,211,685 Length adjustment: 23 Effective length of query: 447 Effective length of database: 93,106,754,628 Effective search space: 41618719318716 Effective search space used: 41618719318716 X1: 11 (21.8 bits) S2: 21 (42.1 bits)
|
protein update |
2009. 7.11 |
Homology vs Protein |
Query= Contig-U14571-1 (Contig-U14571-1Q) /CSM_Contig/Contig-U14571-1Q.Seq.d (470 letters)
Database: nrp_B 3,236,559 sequences; 1,051,180,864 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
(Q54L00) RecName: Full=Probable LIM domain-containing serine/thr... 145 3e-34 AC114263_25(AC114263|pid:none) Dictyostelium discoideum chromoso... 77 2e-13 (Q68EY3) RecName: Full=LIM/homeobox protein Lhx9; Short... 73 3e-12 U11701_1(U11701|pid:none) Human LIM-homeobox domain protein (hLH... 72 5e-12 BT075435_1(BT075435|pid:none) Osmerus mordax clone omor-rgc-510-... 71 1e-11 (P50458) RecName: Full=LIM/homeobox protein Lhx2; Short... 70 2e-11 AP009124_1(AP009124|pid:none) Sus scrofa genomic DNA, chromosome... 70 2e-11 AL929566_1(AL929566|pid:none) Zebrafish DNA sequence from clone ... 70 2e-11 (Q9Z0S2) RecName: Full=LIM/homeobox protein Lhx2; Short... 70 2e-11 BC162549_1(BC162549|pid:none) Danio rerio LIM homeobox 2, mRNA (... 70 2e-11 AL929566_2(AL929566|pid:none) Zebrafish DNA sequence from clone ... 70 2e-11 DQ146407_1(DQ146407|pid:none) Danio rerio lim homeobox transcrip... 70 2e-11 AB005882_1(AB005882|pid:none) Gallus gallus mRNA for LIM homeodo... 70 2e-11 AF124735_1(AF124735|pid:none) Homo sapiens LIM-homeodomain prote... 70 2e-11 BC127381_1(BC127381|pid:none) Danio rerio LIM homeobox 2, mRNA (... 70 2e-11 A47179(A47179)homeotic protein LH-2 - rat 70 3e-11 FJ438942_1(FJ438942|pid:none) Xenopus laevis LHX9 mRNA, complete... 70 3e-11 AY141037_1(AY141037|pid:none) Xenopus laevis LIM homeobox protei... 69 4e-11 AK027597_1(AK027597|pid:none) Homo sapiens cDNA FLJ14691 fis, cl... 69 7e-11 BT079181_1(BT079181|pid:none) Esox lucius clone eluc-evq-511-060... 69 7e-11 (Q90881) RecName: Full=LIM/homeobox protein Lhx9; Short... 68 9e-11 JC5658(JC5658) LIM domain-containing homeodomain LH-2B - chicken... 68 9e-11 BT056486_1(BT056486|pid:none) Salmo salar clone ssal-rgb2-624-31... 68 9e-11 AF113518_1(AF113518|pid:none) Mus musculus LIM homeobox protein ... 68 9e-11 BT049822_1(BT049822|pid:none) Salmo salar clone ssal-rgb2-509-14... 68 9e-11 AY113460_1(AY113460|pid:none) Drosophila melanogaster RE37250 fu... 68 1e-10 AF198250_1(AF198250|pid:none) Dictyostelium discoideum lim2 prot... 68 1e-10 AE014296_2988(AE014296|pid:none) Drosophila melanogaster chromos... 68 1e-10 AY534647_1(AY534647|pid:none) Oryzias latipes lhx9 mRNA, partial... 68 1e-10 (Q1LWV4) RecName: Full=LIM/homeobox protein Lhx9; Short... 68 1e-10 AE014296_2989(AE014296|pid:none) Drosophila melanogaster chromos... 68 1e-10 DQ307067_1(DQ307067|pid:none) Homo sapiens bone marrow four and ... 68 1e-10 BC093258_1(BC093258|pid:none) Danio rerio LIM homeobox 9, mRNA (... 68 1e-10 AE014296_2981(AE014296|pid:none) Drosophila melanogaster chromos... 68 1e-10 BC128722_1(BC128722|pid:none) Rattus norvegicus cDNA clone MGC:1... 67 2e-10 AL590115_6(AL590115|pid:none) Human DNA sequence from clone RP11... 67 2e-10 (A2I8Z7) RecName: Full=LIM/homeobox protein Lhx9; Short... 67 2e-10 AJ243851_1(AJ243851|pid:none) Mus musculus mRNA for putative LIM... 67 2e-10 Z81068_16(Z81068|pid:none) Caenorhabditis elegans Cosmid F25H5, ... 67 2e-10 AJ243852_2(AJ243852|pid:none) Mus musculus Lhx9 gene, partial ex... 67 2e-10 AL590115_3(AL590115|pid:none) Human DNA sequence from clone RP11... 67 2e-10 Z81068_15(Z81068|pid:none) Caenorhabditis elegans Cosmid F25H5, ... 67 2e-10 AF527619_1(AF527619|pid:none) Rattus norvegicus LIM-homeodomain ... 67 2e-10 AJ243852_1(AJ243852|pid:none) Mus musculus Lhx9 gene, partial ex... 67 2e-10 (Q9NQ69) RecName: Full=LIM/homeobox protein Lhx9; Short... 67 2e-10 AJ277915_1(AJ277915|pid:none) Homo sapiens partial mRNA for LIM-... 67 2e-10 AE014296_2990(AE014296|pid:none) Drosophila melanogaster chromos... 67 3e-10 (A0JNI8) RecName: Full=LIM/homeobox protein Lhx9; Short... 66 3e-10 BT021834_1(BT021834|pid:none) Bos taurus LIM homeobox 9 (LHX9), ... 66 3e-10 FN317368_1(FN317368|pid:none) Schistosoma japonicum isolate Anhu... 66 4e-10 AJ275967_2(AJ275967|pid:none) Sus scrofa fhl1C gene for four and... 66 4e-10 AJ275967_1(AJ275967|pid:none) Sus scrofa fhl1C gene for four and... 66 4e-10 AK094511_1(AK094511|pid:none) Homo sapiens cDNA FLJ37192 fis, cl... 66 4e-10 EU436753_1(EU436753|pid:none) Schistosoma mansoni LIMPETin mRNA,... 65 6e-10 JG0164(JG0164)LIM protein, FHL4 - mouse 65 6e-10 (P53666) RecName: Full=LIM domain kinase 2; Short=LIMK-... 65 6e-10 AB188255_1(AB188255|pid:none) Danio rerio lhx2 mRNA for LIM home... 65 6e-10 (Q55DS4) RecName: Full=LIM domain-containing protein G; 65 1e-09 (P97447) RecName: Full=Four and a half LIM domains protein 1; ... 64 1e-09 AB269883_1(AB269883|pid:none) Rana rugosa Lhx9 beta mRNA for LIM... 64 1e-09 AL671998_1(AL671998|pid:none) Mouse DNA sequence from clone RP23... 64 1e-09 AL671998_5(AL671998|pid:none) Mouse DNA sequence from clone RP23... 64 1e-09 AL671998_6(AL671998|pid:none) Mouse DNA sequence from clone RP23... 64 1e-09 (A2PZF9) RecName: Full=LIM/homeobox protein Lhx9; Short... 64 1e-09 AB269884_1(AB269884|pid:none) Rana rugosa Lhx9 gamma mRNA for LI... 64 1e-09 FN357384_18(FN357384|pid:none) Schistosoma mansoni genome sequen... 64 1e-09 AL671998_2(AL671998|pid:none) Mouse DNA sequence from clone RP23... 64 1e-09 AL671998_3(AL671998|pid:none) Mouse DNA sequence from clone RP23... 64 1e-09 AF053486_1(AF053486|pid:none) Mus musculus LIM-protein FHL4 (Fhl... 64 2e-09 BC061782_1(BC061782|pid:none) Rattus norvegicus four and a half ... 64 2e-09 BC061148_1(BC061148|pid:none) Mus musculus four and a half LIM d... 64 2e-09 AB269886_1(AB269886|pid:none) Rana rugosa Lhx9 epsilon mRNA for ... 64 2e-09 AB269885_1(AB269885|pid:none) Rana rugosa Lhx9 delta mRNA for LI... 64 2e-09 AK005848_1(AK005848|pid:none) Mus musculus adult male testis cDN... 64 2e-09 EF384219_1(EF384219|pid:none) Platynereis dumerilii Lhx2 mRNA, c... 64 2e-09 BT074680_1(BT074680|pid:none) Osmerus mordax clone omor-rgc-503-... 63 3e-09 CR857378_1(CR857378|pid:none) Pongo abelii mRNA; cDNA DKFZp468P2... 63 3e-09 AY809875_1(AY809875|pid:none) Schistosoma japonicum SJCHGC04856 ... 63 3e-09 AY892978_1(AY892978|pid:none) Synthetic construct Homo sapiens c... 63 3e-09 AF220153_1(AF220153|pid:none) Homo sapiens four and a half LIM d... 63 4e-09 (Q9Y630) RecName: Full=Four and a half LIM domains protein 1; ... 63 4e-09 G01507(G01507) LIM domain transcription factor LIM-1 - human &U... 63 4e-09 (O54785) RecName: Full=LIM domain kinase 2; Short=LIMK-... 63 4e-09 AL078638_8(AL078638|pid:none) Human DNA sequence from clone RP11... 63 4e-09 JC5813(JC5813)LIM motif-containing protein kinase (EC 2.7.1.-) 2... 63 4e-09 AK301642_1(AK301642|pid:none) Homo sapiens cDNA FLJ55259 complet... 63 4e-09 AL078638_6(AL078638|pid:none) Human DNA sequence from clone RP11... 63 4e-09 AK122708_1(AK122708|pid:none) Homo sapiens cDNA FLJ16189 fis, cl... 63 4e-09 AB005140_1(AB005140|pid:none) Mus musculus limk2 gene for LIMK2,... 63 4e-09 AL078638_9(AL078638|pid:none) Human DNA sequence from clone RP11... 63 4e-09 AL929186_6(AL929186|pid:none) Mouse DNA sequence from clone RP23... 62 5e-09 BC036085_1(BC036085|pid:none) Homo sapiens four and a half LIM d... 62 5e-09 AC012360_1(AC012360|pid:none) Homo sapiens BAC clone RP11-332H14... 62 5e-09 BT078286_1(BT078286|pid:none) Lepeophtheirus salmonis Pacific fo... 62 5e-09 AK141086_1(AK141086|pid:none) Mus musculus 0 day neonate cerebel... 62 6e-09 (P53411) RecName: Full=LIM/homeobox protein Lhx1; Short... 62 6e-09 AY650378_1(AY650378|pid:none) Macaca fascicularis LIM homeobox p... 62 6e-09 BC020470_1(BC020470|pid:none) Homo sapiens LIM homeobox 1, mRNA ... 62 6e-09 BC159222_1(BC159222|pid:none) Danio rerio four and a half LIM do... 62 6e-09 (P63006) RecName: Full=LIM/homeobox protein Lhx1; Short... 62 6e-09 AK298253_1(AK298253|pid:none) Homo sapiens cDNA FLJ58086 complet... 62 6e-09 (P48742) RecName: Full=LIM/homeobox protein Lhx1; Short... 62 6e-09 BT082154_1(BT082154|pid:none) Anoplopoma fimbria clone afim-evh-... 62 6e-09 DQ225183_1(DQ225183|pid:none) Sparus aurata four and a half LIM ... 62 8e-09 (P29674) RecName: Full=LIM/homeobox protein Lhx1; Short... 62 8e-09 JC7686(JC7686)activator of cAMP-responsive element modulator, te... 62 8e-09 AF013242_1(AF013242|pid:none) Xenopus laevis homeobox protein Li... 62 8e-09 (Q55GV9) RecName: Full=Calponin homology and LIM domain-containi... 61 1e-08 (Q4R7A4) RecName: Full=Four and a half LIM domains protein 5; ... 61 1e-08 DQ268534_1(DQ268534|pid:none) Heterodera glycines UNC-97-like pr... 61 1e-08 BT056943_1(BT056943|pid:none) Salmo salar clone ssal-rgb2-609-36... 61 1e-08 BC079524_1(BC079524|pid:none) Danio rerio zgc:92375, mRNA (cDNA ... 61 1e-08 (Q90476) RecName: Full=LIM/homeobox protein Lhx1; Short... 61 1e-08 BT044731_1(BT044731|pid:none) Salmo salar clone ssal-rgf-502-086... 60 2e-08 (Q6AXT1) RecName: Full=Four and a half LIM domains protein 5; ... 60 2e-08 AL021177_2(AL021177|pid:none) Caenorhabditis elegans YAC Y1A5A, ... 60 2e-08 AY815014_1(AY815014|pid:none) Schistosoma japonicum SJCHGC06016 ... 60 3e-08 (Q2YDK0) RecName: Full=Four and a half LIM domains protein 5; ... 60 3e-08 DQ399521_1(DQ399521|pid:none) Branchiostoma floridae LIM-homeodo... 60 3e-08 BC067214_1(BC067214|pid:none) Homo sapiens actin binding LIM pro... 59 4e-08 CU638712_1(CU638712|pid:none) Zebrafish DNA sequence from clone ... 59 4e-08 AF043693_1(AF043693|pid:none) Caenorhabditis elegans cosmid C34B... 59 4e-08 DQ413176_1(DQ413176|pid:none) Homo sapiens actin-binding LIM pro... 59 4e-08 AB451269_1(AB451269|pid:none) Homo sapiens LIMK2 mRNA for LIM do... 59 4e-08 BC122567_1(BC122567|pid:none) Homo sapiens actin binding LIM pro... 59 4e-08 AJ311711_1(AJ311711|pid:none) Xenopus laevis partial mRNA for Lh... 59 4e-08 DQ413177_1(DQ413177|pid:none) Homo sapiens actin-binding LIM pro... 59 4e-08 (P53671) RecName: Full=LIM domain kinase 2; Short=LIMK-... 59 4e-08 BC095708_1(BC095708|pid:none) Danio rerio zgc:112257, mRNA (cDNA... 59 4e-08 AK304680_1(AK304680|pid:none) Homo sapiens cDNA FLJ55274 complet... 59 4e-08 FN317463_1(FN317463|pid:none) Schistosoma japonicum isolate Anhu... 59 4e-08 BT048479_1(BT048479|pid:none) Salmo salar clone ssal-evd-567-121... 59 5e-08 BC072204_1(BC072204|pid:none) Xenopus laevis hypothetical protei... 59 5e-08 BC095840_1(BC095840|pid:none) Danio rerio LIM and senescent cell... 59 5e-08 AK151235_1(AK151235|pid:none) Mus musculus bone marrow macrophag... 59 7e-08 AK304260_1(AK304260|pid:none) Homo sapiens cDNA FLJ55509 complet... 59 7e-08 BC123746_1(BC123746|pid:none) Bos taurus similar to Lims E prote... 59 7e-08 AK088939_1(AK088939|pid:none) Mus musculus 2 days neonate thymus... 59 7e-08 AF317890_1(AF317890|pid:none) Xenopus laevis paxillin mRNA, comp... 59 7e-08 AK014954_1(AK014954|pid:none) Mus musculus adult male testis cDN... 59 7e-08 AK082932_1(AK082932|pid:none) Mus musculus 7 days embryo whole b... 59 7e-08 FN317571_1(FN317571|pid:none) Schistosoma japonicum isolate Anhu... 59 7e-08 (Q2KJ33) RecName: Full=LIM and senescent cell antigen-like-conta... 59 7e-08 AK302411_1(AK302411|pid:none) Homo sapiens cDNA FLJ55165 complet... 59 7e-08 BC005341_1(BC005341|pid:none) Homo sapiens LIM and senescent cel... 59 7e-08 BC167913_1(BC167913|pid:none) Xenopus tropicalis cDNA clone MGC:... 59 7e-08 AB122059_1(AB122059|pid:none) Anguilla japonica eFHL5 mRNA for f... 59 7e-08 FJ640985_1(FJ640985|pid:none) Rattus norvegicus LIM and senescen... 59 7e-08 AB027499_1(AB027499|pid:none) Xenopus laevis mRNA for paxillin, ... 59 7e-08 JC2324(JC2324)LIM protein - human 59 7e-08 (Q99JW4) RecName: Full=LIM and senescent cell antigen-like-conta... 59 7e-08 AF110763_1(AF110763|pid:none) Homo sapiens skeletal muscle LIM-p... 58 9e-08 BC072725_1(BC072725|pid:none) Danio rerio four and a half LIM do... 58 9e-08 BC078615_1(BC078615|pid:none) Xenopus laevis MGC85575 protein, m... 58 9e-08 T19871(T19871)hypothetical protein C40H5.5 - Caenorhabditis eleg... 58 9e-08 BT044983_1(BT044983|pid:none) Salmo salar clone ssal-rgf-509-033... 58 9e-08 AB058711_1(AB058711|pid:none) Homo sapiens mRNA for KIAA1808 pro... 58 9e-08 U72211_1(U72211|pid:none) Caenorhabditis elegans LIM homeobox ge... 58 9e-08 (Q32L23) RecName: Full=LIM domain kinase 2; Short=LIMK-... 58 9e-08 DQ413175_1(DQ413175|pid:none) Mus musculus actin-binding LIM pro... 58 9e-08 AK154494_1(AK154494|pid:none) Mus musculus NOD-derived CD11c +ve... 58 9e-08 G02741(JC4893;G02741)skeletal muscle LIM-protein SLIM1 - human 58 9e-08 CR858833_1(CR858833|pid:none) Pongo abelii mRNA; cDNA DKFZp468O1... 58 9e-08 AK082707_1(AK082707|pid:none) Mus musculus 0 day neonate cerebel... 58 9e-08 AJ748603_1(AJ748603|pid:none) Mus musculus mRNA for actin bindin... 58 9e-08 U60117_1(U60117|pid:none) Human skeletal muscle LIM-protein SLIM... 58 1e-07 C88346(C88346)protein F42G4.3a [imported] - Caenorhabditis elegans 57 2e-07 (Q86I44) RecName: Full=LIM domain-containing protein F; &AC1163... 57 2e-07 T22111(T22111) hypothetical protein F42G4.3a - Caenorhabditis el... 57 2e-07 (P49024) RecName: Full=Paxillin; &B55933(B55933) &L30099_1(L300... 57 2e-07 AK297645_1(AK297645|pid:none) Homo sapiens cDNA FLJ56117 complet... 57 3e-07 (Q7Z4I7) RecName: Full=LIM and senescent cell antigen-like-conta... 57 3e-07 AF527766_1(AF527766|pid:none) Homo sapiens tissue-type spleen LI... 57 3e-07 (Q91XD2) RecName: Full=LIM and senescent cell antigen-like-conta... 57 3e-07 AF520987_1(AF520987|pid:none) Homo sapiens LIMS2 (LIMS2) mRNA, c... 57 3e-07 AF527767_1(AF527767|pid:none) Homo sapiens tissue-type uterus LI... 57 3e-07 EU307289_1(EU307289|pid:none) Strongylocentrotus purpuratus Lim1... 57 3e-07 EU931658_1(EU931658|pid:none) Saccoglossus kowalevskii islet hom... 57 3e-07 (Q1JQB5) RecName: Full=Filamin-binding LIM protein 1; S... 57 3e-07 AK055363_1(AK055363|pid:none) Homo sapiens cDNA FLJ30801 fis, cl... 57 3e-07 AJ703893_1(AJ703893|pid:none) Rattus norvegicus mRNA for actin b... 57 3e-07 BC087108_1(BC087108|pid:none) Rattus norvegicus LIM and senescen... 57 3e-07 AF527769_1(AF527769|pid:none) Homo sapiens tissue-type brain LIM... 57 3e-07 BC144410_1(BC144410|pid:none) Homo sapiens paxillin, mRNA (cDNA ... 56 3e-07 AY641810_1(AY641810|pid:none) Rattus norvegicus myocardial ische... 56 3e-07 BC003298_1(BC003298|pid:none) Mus musculus paxillin, mRNA (cDNA ... 56 3e-07 AK128712_1(AK128712|pid:none) Homo sapiens cDNA FLJ46879 fis, cl... 56 3e-07 D86863_1(D86863|pid:none) Homo sapiens mRNA for paxillin gamma, ... 56 3e-07 (P49023) RecName: Full=Paxillin; &D86862_1(D86862|pid:none) 56 3e-07 AF293882_1(AF293882|pid:none) Mus musculus paxillin alpha mRNA, ... 56 3e-07 BC077901_1(BC077901|pid:none) Xenopus laevis MGC80746 protein, m... 56 3e-07 AC004263_2(AC004263|pid:none) Homo sapiens PAC clone 278C19 from... 56 3e-07 BX648777_1(BX648777|pid:none) Homo sapiens mRNA; cDNA DKFZp686N2... 56 3e-07 AK148060_1(AK148060|pid:none) Mus musculus B16 F10Y cells cDNA, ... 56 3e-07 AF067210_1(AF067210|pid:none) Caenorhabditis elegans cosmid C04F... 56 3e-07 BC082407_1(BC082407|pid:none) Xenopus laevis MGC82038 protein, m... 56 3e-07 AK171436_1(AK171436|pid:none) Mus musculus B6-derived CD11 +ve d... 56 3e-07 BC082347_1(BC082347|pid:none) Xenopus tropicalis fhl3 protein, m... 56 5e-07 BC073254_1(BC073254|pid:none) Xenopus laevis MGC80605 protein, m... 56 5e-07 U14530_1(U14530|pid:none) Onchocerca volvulus Ovl3-1 mRNA, parti... 56 5e-07 BC150043_1(BC150043|pid:none) Bos taurus LIM homeobox 5, mRNA (c... 55 6e-07 T09504(T09504;PD0036) LIM-protein FHL3, skeletal muscle - human ... 55 6e-07 AF039720_7(AF039720|pid:none) Caenorhabditis elegans cosmid F33D... 55 6e-07 FN357554_35(FN357554|pid:none) Schistosoma mansoni genome sequen... 55 6e-07 (Q9H2C1) RecName: Full=LIM/homeobox protein Lhx5; Short... 55 6e-07 (P61375) RecName: Full=LIM/homeobox protein Lhx5; Short... 55 6e-07 BC004249_1(BC004249|pid:none) Homo sapiens thyroid hormone recep... 55 8e-07 AF172845_1(AF172845|pid:none) Manduca sexta death-associated LIM... 55 8e-07 EU675626_1(EU675626|pid:none) Hirudo medicinalis paxillin mRNA, ... 55 8e-07 BT044387_1(BT044387|pid:none) Drosophila melanogaster FI08061 fu... 55 8e-07 Z54235_3(Z54235|pid:none) Caenorhabditis elegans Cosmid C09G9, c... 55 1e-06 U83086_1(U83086|pid:none) Dictyostelium discoideum LimA (limA) m... 55 1e-06 BC002680_1(BC002680|pid:none) Homo sapiens thyroid hormone recep... 55 1e-06 AJ001902_1(AJ001902|pid:none) Homo sapiens mRNA for TRIP6 (thyro... 55 1e-06 T19156(T19156;T24830) probable metal binding protein T11B7.4a - ... 55 1e-06 BC163263_1(BC163263|pid:none) Danio rerio LIM domain kinase 1, m... 55 1e-06 (Q54QR1) RecName: Full=LIM domain-containing protein A; 55 1e-06 AF312032_5(AF312032|pid:none) Homo sapiens acetylcholinesterase ... 55 1e-06 BT015299_1(BT015299|pid:none) Drosophila melanogaster AT25814 fu... 55 1e-06 FN317474_1(FN317474|pid:none) Schistosoma japonicum isolate Anhu... 55 1e-06 AF000974_1(AF000974|pid:none) Human zyxin related protein ZRP-1 ... 55 1e-06 Z54235_5(Z54235|pid:none) Caenorhabditis elegans Cosmid C09G9, c... 55 1e-06 (Q6DJ06) RecName: Full=LIM domain transcription factor LMO4.2; A... 54 1e-06 DQ118096_1(DQ118096|pid:none) Danio rerio four and half LIM doma... 54 1e-06 BC091932_1(BC091932|pid:none) Danio rerio zgc:112954, mRNA (cDNA... 54 1e-06 BC129372_1(BC129372|pid:none) Danio rerio zgc:158673, mRNA (cDNA... 54 1e-06 AF532926_1(AF532926|pid:none) Gallus gallus LIM domain only 4 pr... 54 1e-06 (Q5REN1) RecName: Full=Filamin-binding LIM protein 1; S... 54 1e-06 DQ894626_1(DQ894626|pid:none) Synthetic construct Homo sapiens c... 54 1e-06 AF316038_1(AF316038|pid:none) Mus musculus actin-binding double ... 54 1e-06 AF312926_1(AF312926|pid:none) Drosophila melanogaster focal cont... 54 1e-06 AK122196_1(AK122196|pid:none) Mus musculus mRNA for mKIAA0059 pr... 54 1e-06 AE014134_3180(AE014134|pid:none) Drosophila melanogaster chromos... 54 1e-06 AB073906_1(AB073906|pid:none) Branchiostoma belcheri Bb-Lhx3 mRN... 54 1e-06 AL450998_6(AL450998|pid:none) Human DNA sequence from clone RP11... 54 1e-06 BC076053_1(BC076053|pid:none) Danio rerio LIM domain only 4, lik... 54 1e-06 AE014134_3183(AE014134|pid:none) Drosophila melanogaster chromos... 54 1e-06 AK292578_1(AK292578|pid:none) Homo sapiens cDNA FLJ77516 complet... 54 1e-06 (Q8WUP2) RecName: Full=Filamin-binding LIM protein 1; S... 54 1e-06 AE014134_3184(AE014134|pid:none) Drosophila melanogaster chromos... 54 1e-06 AY122248_1(AY122248|pid:none) Drosophila melanogaster SD04793 fu... 54 1e-06 AB048194_1(AB048194|pid:none) Drosophila melanogaster DPXN mRNA ... 54 1e-06 AB495363_1(AB495363|pid:none) Nematostella vectensis lhx1 mRNA f... 54 1e-06 BC142519_1(BC142519|pid:none) Bos taurus actin binding LIM prote... 54 1e-06 BC171566_1(BC171566|pid:none) Danio rerio cDNA clone MGC:198293 ... 54 1e-06 AY223359_1(AY223359|pid:none) Schistosoma japonicum SJCHGC00739 ... 54 1e-06 CR457461_4(CR457461|pid:none) Zebrafish DNA sequence from clone ... 54 1e-06 AK171860_1(AK171860|pid:none) Mus musculus activated spleen cDNA... 54 1e-06 EU307287_1(EU307287|pid:none) Strongylocentrotus purpuratus Lhx2... 54 1e-06 BX950216_4(BX950216|pid:none) Zebrafish DNA sequence from clone ... 54 1e-06 BC045922_1(BC045922|pid:none) Danio rerio zgc:56116, mRNA (cDNA ... 54 1e-06 AE013599_3992(AE013599|pid:none) Drosophila melanogaster chromos... 54 2e-06 AF005654_1(AF005654|pid:none) Homo sapiens actin-binding double-... 54 2e-06 BC161996_1(BC161996|pid:none) Rattus norvegicus similar to thyro... 54 2e-06 CR858106_1(CR858106|pid:none) Pongo abelii mRNA; cDNA DKFZp468F1... 54 2e-06 AB462929_1(AB462929|pid:none) Synthetic construct DNA, clone: pF... 54 2e-06 AB210530_1(AB210530|pid:none) Ciona intestinalis mRNA for transc... 54 2e-06 D31883_1(D31883|pid:none) Homo sapiens KIAA0059 mRNA, partial cds. 54 2e-06 AL133384_7(AL133384|pid:none) Human DNA sequence from clone RP11... 54 2e-06 BC160566_1(BC160566|pid:none) Xenopus tropicalis four and a half... 54 2e-06 AK122891_1(AK122891|pid:none) Homo sapiens cDNA FLJ16546 fis, cl... 54 2e-06 BT046142_1(BT046142|pid:none) Drosophila melanogaster FI08059 fu... 54 2e-06 (Q801P0) RecName: Full=LIM domain transcription factor LMO4-B; A... 54 2e-06 AL133384_8(AL133384|pid:none) Human DNA sequence from clone RP11... 54 2e-06 BT011157_1(BT011157|pid:none) Drosophila melanogaster AT24473 fu... 54 2e-06 AM392930_1(AM392930|pid:none) Synthetic construct Homo sapiens c... 54 2e-06 AE014297_1029(AE014297|pid:none) Drosophila melanogaster chromos... 54 2e-06 BC083393_1(BC083393|pid:none) Danio rerio zgc:103466, mRNA (cDNA... 54 2e-06 U14166_1(U14166|pid:none) Mus musculus Kiz-1 mRNA, complete cds. 54 2e-06 AE014297_1030(AE014297|pid:none) Drosophila melanogaster chromos... 54 2e-06 CR936426_1(CR936426|pid:none) Zebrafish DNA sequence from clone ... 54 2e-06 (Q8AW92) RecName: Full=LIM domain transcription factor LMO4-A; A... 54 2e-06 DQ118097_1(DQ118097|pid:none) Danio rerio four and half LIM doma... 54 2e-06 U15159_1(U15159|pid:none) Mus musculus limk kinase (limk) mRNA, ... 54 2e-06 AE014297_1031(AE014297|pid:none) Drosophila melanogaster chromos... 54 2e-06 AK093471_1(AK093471|pid:none) Homo sapiens cDNA FLJ36152 fis, cl... 53 3e-06 U62293_1(U62293|pid:none) Human LIM-kinase1 and alternatively sp... 53 3e-06 CS300582_1(CS300582|pid:none) Sequence 90 from Patent EP1661986. 53 3e-06 (P53669) RecName: Full=LIM domain kinase 1; Short=LIMK-... 53 3e-06 AL133384_4(AL133384|pid:none) Human DNA sequence from clone RP11... 53 3e-06 AK290162_1(AK290162|pid:none) Homo sapiens cDNA FLJ75611 complet... 53 3e-06 AF134379_1(AF134379|pid:none) Homo sapiens LIM domain kinase 1 s... 53 3e-06 U62293_2(U62293|pid:none) Human LIM-kinase1 and alternatively sp... 53 3e-06 (P53667) RecName: Full=LIM domain kinase 1; Short=LIMK-... 53 3e-06 AF459643_1(AF459643|pid:none) Homo sapiens filamin-binding LIM p... 53 3e-06 AM393722_1(AM393722|pid:none) Synthetic construct Homo sapiens c... 53 3e-06 CR858667_1(CR858667|pid:none) Pongo abelii mRNA; cDNA DKFZp459P0... 53 3e-06 FN317962_1(FN317962|pid:none) Schistosoma japonicum isolate Anhu... 53 4e-06 DQ413174_1(DQ413174|pid:none) Homo sapiens actin-binding LIM pro... 53 4e-06 DQ266432_1(DQ266432|pid:none) Homo sapiens FHL2 isoform 5 mRNA, ... 53 4e-06 AK173040_1(AK173040|pid:none) Mus musculus mRNA for mKIAA0843 pr... 53 4e-06 AY892743_1(AY892743|pid:none) Synthetic construct Homo sapiens c... 53 4e-06 AM393524_1(AM393524|pid:none) Synthetic construct Homo sapiens c... 53 4e-06 AM392844_1(AM392844|pid:none) Synthetic construct Mus musculus c... 53 4e-06 AM392595_1(AM392595|pid:none) Synthetic construct Homo sapiens c... 53 4e-06 AK304760_1(AK304760|pid:none) Homo sapiens cDNA FLJ61577 complet... 53 4e-06 BC155652_1(BC155652|pid:none) Danio rerio zgc:172321, mRNA (cDNA... 53 4e-06 AM393563_1(AM393563|pid:none) Synthetic construct Homo sapiens c... 53 4e-06 AF527770_1(AF527770|pid:none) Homo sapiens tissue-type brain LIM... 53 4e-06 (O94929) RecName: Full=Actin-binding LIM protein 3; AltName: Ful... 53 4e-06 AM392963_1(AM392963|pid:none) Synthetic construct Homo sapiens c... 53 4e-06 CR860826_1(CR860826|pid:none) Pongo abelii mRNA; cDNA DKFZp469A2... 53 4e-06 EU239660_1(EU239660|pid:none) Caenorhabditis elegans pxl-1 isofo... 53 4e-06 AB056465_1(AB056465|pid:none) Drosophila melanogaster PDLP mRNA ... 53 4e-06 AM393559_1(AM393559|pid:none) Synthetic construct Homo sapiens c... 53 4e-06 AM393554_1(AM393554|pid:none) Synthetic construct Homo sapiens c... 53 4e-06 AE014296_2255(AE014296|pid:none) Drosophila melanogaster chromos... 53 4e-06 AM393116_1(AM393116|pid:none) Synthetic construct Homo sapiens c... 53 4e-06 (Q09476) RecName: Full=Paxillin homolog 1; &EU239658_1(EU239658... 53 4e-06 AM393820_1(AM393820|pid:none) Synthetic construct Homo sapiens c... 53 4e-06 AM393099_1(AM393099|pid:none) Synthetic construct Homo sapiens c... 53 4e-06 BX957309_6(BX957309|pid:none) Zebrafish DNA sequence from clone ... 53 4e-06 AM393401_1(AM393401|pid:none) Synthetic construct Homo sapiens c... 53 4e-06 AM392998_1(AM392998|pid:none) Synthetic construct Homo sapiens c... 53 4e-06 DQ138704_1(DQ138704|pid:none) Drosophila melanogaster strain Ral... 52 5e-06 BC065578_1(BC065578|pid:none) Rattus norvegicus LIM domain kinas... 52 5e-06 D31876_1(D31876|pid:none) Rat mRNA for LIMK-2c, complete cds. &... 52 5e-06 AY186999_2(AY186999|pid:none) Drosophila virilis unc-5 (unc-5) g... 52 5e-06 AB005132_1(AB005132|pid:none) Mus musculus mRNA for LIMK2b, comp... 52 5e-06 AY190945_1(AY190945|pid:none) Drosophila pseudoobscura clone DPS... 52 5e-06 AL671968_27(AL671968|pid:none) Mouse DNA sequence from clone RP2... 52 5e-06 AY190950_1(AY190950|pid:none) Drosophila willistoni clone DWIF01... 52 5e-06 (Q99PD6) RecName: Full=Transforming growth factor beta-1-induced... 52 5e-06 AE014134_3473(AE014134|pid:none) Drosophila melanogaster chromos... 52 7e-06 AY449458_28(AY449458|pid:none) Oikopleura dioica clone BACOIKO00... 52 7e-06 BC171171_1(BC171171|pid:none) Xenopus tropicalis cDNA clone MGC:... 52 7e-06 AF134772_1(AF134772|pid:none) Mus musculus LIM protein (Fhl3) mR... 52 7e-06 AY891386_1(AY891386|pid:none) Synthetic construct Homo sapiens c... 52 7e-06 BC021468_1(BC021468|pid:none) Mus musculus four and a half LIM d... 52 7e-06 (Q99N69) RecName: Full=Leupaxin; &AB053936_1(AB053936|pid:none)... 52 7e-06 BC157176_1(BC157176|pid:none) Xenopus tropicalis hypothetical pr... 52 7e-06 (Q5FVB2) RecName: Full=LIM domain transcription factor LMO4.1; A... 52 7e-06 (Q13643) RecName: Full=Four and a half LIM domains protein 3; ... 52 7e-06 (O70433) RecName: Full=Four and a half LIM domains protein 2; ... 52 7e-06 (Q55BI0) RecName: Full=LIM domain-containing protein DDB_G0271356; 52 7e-06 AM393284_1(AM393284|pid:none) Synthetic construct Homo sapiens c... 52 9e-06 EF215436_1(EF215436|pid:none) Callithrix jacchus clone A03-50.1_... 52 9e-06 DQ143898_1(DQ143898|pid:none) Mus musculus transforming growth f... 52 9e-06 DQ143893_1(DQ143893|pid:none) Mus musculus transforming growth f... 52 9e-06 AB174411_1(AB174411|pid:none) Macaca fascicularis brain cDNA clo... 52 9e-06 AB042816_1(AB042816|pid:none) Drosophila melanogaster DLIMK1 mRN... 52 9e-06 AY206012_1(AY206012|pid:none) Mus musculus PDZ-LIM protein cyphe... 52 9e-06 AB495372_1(AB495372|pid:none) Hemicentrotus pulcherrimus lhx3 mR... 52 9e-06 BC118126_1(BC118126|pid:none) Bos taurus leupaxin, mRNA (cDNA cl... 52 9e-06 (Q8IR79) RecName: Full=LIM domain kinase 1; Short=LIMK-... 52 9e-06 DQ138707_1(DQ138707|pid:none) Drosophila yakuba strain Tai18 CG3... 52 9e-06 AY206013_1(AY206013|pid:none) Mus musculus PDZ-LIM protein cyphe... 52 9e-06 (O35115) RecName: Full=Four and a half LIM domains protein 2; ... 52 9e-06 AM393655_1(AM393655|pid:none) Synthetic construct Homo sapiens c... 52 9e-06 AF114378_1(AF114378|pid:none) Mus musculus PDZ-LIM protein cyphe... 52 9e-06 DQ143900_1(DQ143900|pid:none) Mus musculus transforming growth f... 52 9e-06 (Q9R0Z1) RecName: Full=LIM domain-binding protein 3; AltName: Fu... 52 9e-06 DQ143891_1(DQ143891|pid:none) Mus musculus transforming growth f... 52 9e-06 AE014298_1862(AE014298|pid:none) Drosophila melanogaster chromos... 52 9e-06 AK172980_1(AK172980|pid:none) Mus musculus mRNA for mKIAA0613 pr... 52 9e-06 AY915618_1(AY915618|pid:none) Schistosoma japonicum SJCHGC08109 ... 52 9e-06 AF228058_1(AF228058|pid:none) Mus musculus oracle 2 protein mRNA... 52 9e-06 BC088217_1(BC088217|pid:none) Rattus norvegicus leupaxin, mRNA (... 52 9e-06 (Q3YBZ6) RecName: Full=Transforming growth factor beta-1-induced... 52 9e-06 DQ431040_1(DQ431040|pid:none) Saccoglossus kowalevskii lim domai... 51 1e-05 BC166037_1(BC166037|pid:none) Xenopus tropicalis ISL LIM homeobo... 51 1e-05 AM393090_1(AM393090|pid:none) Synthetic construct Homo sapiens c... 51 1e-05 CR457425_1(CR457425|pid:none) Homo sapiens full open reading fra... 51 1e-05 AM269973_16(AM269973|pid:none) Aspergillus niger contig An01c026... 51 1e-05 T27637(T27637)hypothetical protein ZC64.4 - Caenorhabditis elegans 51 1e-05 BC013051_1(BC013051|pid:none) Homo sapiens LIM domain kinase 2, ... 51 1e-05 (Q2KI95) RecName: Full=Four and a half LIM domains protein 2; ... 51 1e-05 U39740_5(U39740|pid:none) Caenorhabditis elegans cosmid ZC64, co... 51 1e-05 AL117466_1(AL117466|pid:none) Homo sapiens mRNA; cDNA DKFZp586K0... 51 1e-05 AC002073_3(AC002073|pid:none) Human PAC clone RP3-515N1 from 22q... 51 1e-05 AE014134_3138(AE014134|pid:none) Drosophila melanogaster chromos... 51 1e-05 CR853286_10(CR853286|pid:none) Zebrafish DNA sequence from clone... 51 1e-05 AF109306_1(AF109306|pid:none) Drosophila melanogaster LIM homeod... 51 1e-05 BC171270_1(BC171270|pid:none) Xenopus tropicalis LIM domains con... 51 1e-05 FJ744593_1(FJ744593|pid:none) Sparus aurata four and a half LIM ... 51 1e-05 BC061449_1(BC061449|pid:none) Danio rerio zgc:63514, mRNA (cDNA ... 51 1e-05 BC026563_1(BC026563|pid:none) Mus musculus leupaxin, mRNA (cDNA ... 51 1e-05 AY335601_1(AY335601|pid:none) Synthetic construct Homo sapiens L... 51 1e-05 CR760537_1(CR760537|pid:none) Xenopus tropicalis finished cDNA, ... 51 1e-05 AJ493397_1(AJ493397|pid:none) Suberites domuncula partial mRNA f... 51 1e-05 AF118146_1(AF118146|pid:none) Oryctolagus cuniculus leupaxin mRN... 51 1e-05 BC104510_1(BC104510|pid:none) Bos taurus transforming growth fac... 51 1e-05 BT046814_1(BT046814|pid:none) Salmo salar clone ssal-evd-532-212... 51 1e-05 (Q3MHZ4) RecName: Full=Transforming growth factor beta-1-induced... 51 1e-05 BC124894_1(BC124894|pid:none) Xenopus laevis islet-1, mRNA (cDNA... 51 1e-05 AE014298_2577(AE014298|pid:none) Drosophila melanogaster chromos... 51 1e-05 AJ133767_1(AJ133767|pid:none) Homo sapiens mRNA for ZASP protein... 51 1e-05 (Q5XI07) RecName: Full=Lipoma-preferred partner homolog; &BC083... 51 1e-05 AY892297_1(AY892297|pid:none) Synthetic construct Homo sapiens c... 50 2e-05 BC155936_1(BC155936|pid:none) Xenopus laevis hypothetical protei... 50 2e-05 CR382128_388(CR382128|pid:none) Yarrowia lipolytica strain CLIB1... 50 2e-05 AB007836_1(AB007836|pid:none) Homo sapiens mRNA for Hic-5, parti... 50 2e-05 AK031415_1(AK031415|pid:none) Mus musculus 13 days embryo male t... 50 2e-05 AK035743_1(AK035743|pid:none) Mus musculus adult male urinary bl... 50 2e-05 AK147812_1(AK147812|pid:none) Mus musculus melanocyte cDNA, RIKE... 50 2e-05 AY813079_1(AY813079|pid:none) Schistosoma japonicum SJCHGC07563 ... 50 2e-05 CR762227_1(CR762227|pid:none) Xenopus tropicalis finished cDNA, ... 50 2e-05 AK313327_1(AK313327|pid:none) Homo sapiens cDNA, FLJ93847, Homo ... 50 2e-05 (O43294) RecName: Full=Transforming growth factor beta-1-induced... 50 2e-05 BC076551_1(BC076551|pid:none) Danio rerio PDZ and LIM domain 5, ... 50 2e-05 AF116343_1(AF116343|pid:none) Homo sapiens androgen receptor coa... 50 2e-05 BT059646_1(BT059646|pid:none) Salmo salar clone ssal-rgf-502-137... 50 2e-05 AB104633_1(AB104633|pid:none) Mus musculus isl1-beta mRNA for tr... 50 2e-05 DQ138705_1(DQ138705|pid:none) Drosophila simulans strain Ky-a CG... 50 2e-05 DQ913740_1(DQ913740|pid:none) Xenopus laevis LIM domains-contain... 50 2e-05 BC050503_1(BC050503|pid:none) Danio rerio LIM domain containing ... 50 2e-05 U07559_1(U07559|pid:none) Human ISL-1 (Islet-1) mRNA, complete c... 50 2e-05 AK051345_1(AK051345|pid:none) Mus musculus 12 days embryo spinal... 50 2e-05 (Q5F464) RecName: Full=Lipoma-preferred partner homolog; &AJ851... 50 2e-05 BC017027_1(BC017027|pid:none) Homo sapiens ISL1 transcription fa... 50 2e-05 DQ062809_1(DQ062809|pid:none) Drosophila simulans unknown (CG316... 50 2e-05 BC160411_1(BC160411|pid:none) Xenopus tropicalis hypothetical pr... 50 3e-05 AB210533_1(AB210533|pid:none) Ciona intestinalis mRNA for transc... 50 3e-05 DQ062808_1(DQ062808|pid:none) Drosophila melanogaster unknown (C... 50 3e-05 BC049054_1(BC049054|pid:none) Danio rerio zgc:56628, mRNA (cDNA ... 50 3e-05 (A5H447) RecName: Full=Zyxin; &EF051627_1(EF051627|pid:none) 50 3e-05 BC171497_1(BC171497|pid:none) Danio rerio LIM domain containing ... 50 3e-05 A79997_1(A79997|pid:none) Sequence 1 from Patent WO9625493. 50 3e-05 BC160748_1(BC160748|pid:none) Xenopus laevis hypothetical protei... 50 3e-05 BC123619_1(BC123619|pid:none) Bos taurus zyxin, mRNA (cDNA clone... 50 3e-05 BC144076_1(BC144076|pid:none) Homo sapiens LIM domain containing... 50 3e-05 AK160121_1(AK160121|pid:none) Mus musculus whole joints cDNA, RI... 49 4e-05 BC121276_1(BC121276|pid:none) Xenopus tropicalis filamin-binding... 49 4e-05 BC124831_1(BC124831|pid:none) Danio rerio zgc:154176, mRNA (cDNA... 49 4e-05 AY705694_1(AY705694|pid:none) Oikopleura dioica Islet gene, comp... 49 4e-05 CU652212_3(CU652212|pid:none) Zebrafish DNA sequence from clone ... 49 4e-05 FJ362379_10(FJ362379|pid:none) Caenorhabditis sp. PS1010 contig ... 49 4e-05 FN392319_159(FN392319|pid:none) Pichia pastoris GS115 chromosome... 49 4e-05 (A9LS46) RecName: Full=Wilms tumor protein 1-interacting protein... 49 4e-05 (P50211) RecName: Full=Insulin gene enhancer protein ISL-1; ... 49 4e-05 AX405733_1(AX405733|pid:none) Sequence 148 from Patent WO0222660. 49 6e-05 AK223165_1(AK223165|pid:none) Homo sapiens mRNA for leupaxin var... 49 6e-05 AF414086_1(AF414086|pid:none) Xenopus laevis LIM homeobox protei... 49 6e-05 AK004806_1(AK004806|pid:none) Mus musculus adult male lung cDNA,... 49 6e-05 AK047198_1(AK047198|pid:none) Mus musculus 10 days neonate cereb... 49 6e-05 (Q9QXD8) RecName: Full=LIM domain-containing protein 1; 49 6e-05 (O97581) RecName: Full=LIM/homeobox protein Lhx3; Short... 49 6e-05 (O60711) RecName: Full=Leupaxin; &AF062075_1(AF062075|pid:none)... 49 6e-05 AK302309_1(AK302309|pid:none) Homo sapiens cDNA FLJ61463 complet... 49 6e-05 AY971603_1(AY971603|pid:none) Xenopus laevis Hic-5 (Ara-55) mRNA... 49 6e-05 CR536531_1(CR536531|pid:none) Homo sapiens full open reading fra... 49 6e-05 BT003469_1(BT003469|pid:none) Drosophila melanogaster RE70568 fu... 49 6e-05 BC056449_1(BC056449|pid:none) Mus musculus LIM domains containin... 49 6e-05 (A8DZE6) RecName: Full=Wilms tumor protein 1-interacting protein... 49 6e-05 (Q9UGP4) RecName: Full=LIM domain-containing protein 1; &AJ1324... 49 6e-05 FN357490_10(FN357490|pid:none) Schistosoma mansoni genome sequen... 49 6e-05 AK299264_1(AK299264|pid:none) Homo sapiens cDNA FLJ51550 complet... 49 6e-05 AJ132409_1(AJ132409|pid:none) Mus musculus mRNA for LIM domains ... 49 6e-05 DQ082893_1(DQ082893|pid:none) Gallus gallus LIM homeodomain prot... 49 6e-05 BT044877_1(BT044877|pid:none) Salmo salar clone ssal-rgf-506-108... 49 7e-05 AE017348_237(AE017348|pid:none) Cryptococcus neoformans var. neo... 49 7e-05 (Q8TE12) RecName: Full=LIM homeobox transcription factor 1-alpha... 49 7e-05 CR382127_561(CR382127|pid:none) Yarrowia lipolytica strain CLIB1... 49 7e-05 FM992691_175(FM992691|pid:none) Candida dubliniensis CD36 chromo... 49 7e-05 BC125983_1(BC125983|pid:none) Xenopus laevis androgen receptor c... 49 7e-05 (P53407) RecName: Full=Insulin gene enhancer protein isl-2b; Alt... 48 9e-05 (Q68G74) RecName: Full=LIM/homeobox protein Lhx8; Short... 48 9e-05 (P53406) RecName: Full=Insulin gene enhancer protein isl-2a; Alt... 48 9e-05 AY923832_1(AY923832|pid:none) Bos taurus LIM homeodomain 3 prote... 48 9e-05 (Q96IF1) RecName: Full=Protein ajuba; &AX429447_1(AX429447|pid:... 48 9e-05 BC067333_1(BC067333|pid:none) Danio rerio cDNA clone IMAGE:70006... 48 9e-05 AE014135_185(AE014135|pid:none) Drosophila melanogaster chromoso... 48 9e-05 (Q91XC0) RecName: Full=Protein ajuba; &BC011035_1(BC011035|pid:... 48 9e-05 AJ000338_1(AJ000338|pid:none) Mus musculus mRNA for putative tra... 48 9e-05 AY894989_1(AY894989|pid:none) Danio rerio LIM homeodomain protei... 48 9e-05 AE014135_184(AE014135|pid:none) Drosophila melanogaster chromoso... 48 9e-05 AY551077_1(AY551077|pid:none) Danio rerio LIM homeodomain protei... 48 9e-05 U79776_1(U79776|pid:none) Mus musculus ajuba (Ajuba) mRNA, compl... 48 9e-05 AF156889_1(AF156889|pid:none) Homo sapiens LIM homeobox protein ... 48 1e-04 I59360(I59360) homeotic protein lim-3 - mouse &L38857_1(L38857|... 48 1e-04 (Q9UBR4) RecName: Full=LIM/homeobox protein Lhx3; Short... 48 1e-04 DQ353768_1(DQ353768|pid:none) Ictalurus punctatus isolate C24SC1... 48 1e-04 AK090263_1(AK090263|pid:none) Mus musculus 11 days embryo spinal... 48 1e-04 AK298925_1(AK298925|pid:none) Homo sapiens cDNA FLJ53160 complet... 47 2e-04 (Q969G2) RecName: Full=LIM/homeobox protein Lhx4; Short... 47 2e-04 BT003565_1(BT003565|pid:none) Drosophila melanogaster LP02021 fu... 47 2e-04 BT059482_1(BT059482|pid:none) Salmo salar clone ssal-rgf-529-375... 47 2e-04 U15158_1(U15158|pid:none) Homo sapiens ESP-2 mRNA, partial cds. 47 2e-04 U89343_1(U89343|pid:none) Mus musculus LIM-homeobox protein (Lhx... 47 2e-04 AE013599_2227(AE013599|pid:none) Drosophila melanogaster chromos... 47 2e-04 (Q15942) RecName: Full=Zyxin; AltName: Full=Zyxin-2; &AC092214_... 47 2e-04 BC002323_1(BC002323|pid:none) Homo sapiens zyxin, mRNA (cDNA clo... 47 2e-04 AE014298_2059(AE014298|pid:none) Drosophila melanogaster chromos... 47 2e-04 AL773595_2(AL773595|pid:none) Mouse DNA sequence from clone RP23... 47 2e-04 CP001325_73(CP001325|pid:none) Micromonas sp. RCC299 chromosome ... 47 2e-04 EU741246_1(EU741246|pid:none) Emys orbicularis Lim1 mRNA, partia... 47 2e-04 AK299005_1(AK299005|pid:none) Homo sapiens cDNA FLJ53163 complet... 47 2e-04 (P53776) RecName: Full=LIM/homeobox protein Lhx4; Short... 47 2e-04 (P50481) RecName: Full=LIM/homeobox protein Lhx3; Short... 47 2e-04 AY053457_1(AY053457|pid:none) Homo sapiens LIM homeodomain prote... 47 2e-04 AE013599_2223(AE013599|pid:none) Drosophila melanogaster chromos... 47 2e-04 AE013599_2226(AE013599|pid:none) Drosophila melanogaster chromos... 47 2e-04 AB210517_1(AB210517|pid:none) Ciona intestinalis mRNA for transc... 47 2e-04 (P50212) RecName: Full=Insulin gene enhancer protein ISL-2B; ... 47 2e-04 BC017183_1(BC017183|pid:none) Homo sapiens zyxin, mRNA (cDNA clo... 47 2e-04 (P20154) RecName: Full=Protein lin-11; AltName: Full=Abnormal ce... 47 2e-04 AJ006220_1(AJ006220|pid:none) Ciona intestinalis mRNA for LIM ho... 47 2e-04 AK304125_1(AK304125|pid:none) Homo sapiens cDNA FLJ61541 complet... 47 2e-04 AB209531_1(AB209531|pid:none) Homo sapiens mRNA for Enigma homol... 47 2e-04 AM393306_1(AM393306|pid:none) Synthetic construct Homo sapiens c... 47 2e-04
>(Q54L00) RecName: Full=Probable LIM domain-containing serine/threonine-protein kinase DDB_G0287001; EC=2.7.11.1; Length = 650
Score = 145 bits (367), Expect = 3e-34 Identities = 65/113 (57%), Positives = 80/113 (70%), Gaps = 1/113 (0%) Frame = +3
Query: 78 SRCGVCKYIISD-CERYVSDNTFYHVKCFICKICKCELTTCFRGKDGSLMCGDCEIKLNA 254 + CGVCK I++ ER + + +H KCF+CK CK EL + R KDGSL+C +C+IKLNA Sbjct: 4 NNCGVCKTIVNPGSERVKAGTSVFHAKCFVCKECKNELESFIRSKDGSLICDECDIKLNA 63
Query: 255 PKCFKCHLPIQSVSVVARNKEFHNNCFTCISCNEIIKGGFQYSDELFYCSKCD 413 KCFKC LPIQS V AR K FHN+CF C SC +IIKGGF + + FYCS CD Sbjct: 64 RKCFKCQLPIQSTIVTARGKSFHNDCFNCASCEKIIKGGFFFVEGEFYCSTCD 116
Score = 32.3 bits (72), Expect = 5.4 Identities = 18/64 (28%), Positives = 24/64 (37%) Frame = +3
Query: 225 CGDCEIKLNAPKCFKCHLPIQSVSVVARNKEFHNNCFTCISCNEIIKGGFQYSDELFYCS 404 CG C+ +N S V A FH CF C C ++ + D C Sbjct: 6 CGVCKTIVNPG----------SERVKAGTSVFHAKCFVCKECKNELESFIRSKDGSLICD 55
Query: 405 KCDI 416 +CDI Sbjct: 56 ECDI 59
Lambda K H 0.318 0.134 0.401
Gapped Lambda K H 0.267 0.0410 0.140
Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 3236559 Number of Hits to DB: 609,867,933 Number of extensions: 10796630 Number of successful extensions: 28796 Number of sequences better than 10.0: 972 Number of HSP's gapped: 27430 Number of HSP's successfully gapped: 1746 Length of query: 156 Length of database: 1,051,180,864 Length adjustment: 117 Effective length of query: 39 Effective length of database: 672,503,461 Effective search space: 26227634979 Effective search space used: 26227634979 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 29 (15.8 bits)
|
PSORT |
|
VS (DIR, S) |
0 |
VH (FL, L) |
0 |
VF (FL, S) |
0 |
AH (FL, L) |
0 |
AF (FL, S) |
0 |
SL (DIR, L) |
0 |
SS (DIR, S) |
0 |
SH (FL, L) |
1 |
SF (FL, S) |
0 |
CH (FL, L) |
0 |
CF (FL, S) |
0 |
FCL (DIR, L) |
0 |
FC (DIR, S) |
0 |
FC-IC (SUB) |
0 |