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Dicty_cDB
Contig List | Clone List | cDNA Library List
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NBDC - LSDB Archive
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Dicty_cDB
Contig List | Clone List | cDNA Library List
Atlas
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Contig-U02735-1
Contig ID Contig-U02735-1
Contig update 2001. 8.29
Contig sequence 
>Contig-U02735-1 (Contig-U02735-1Q) /CSM_Contig/Contig-U02735-1Q.Seq.d
TTGGATACTGGTTTTAGAAACATTAGAAACTTGGAATAGATTTTTAGAGA
GTTTTTTAAAGAAAAAAGAGAATTCAAATAATACACAAACAACAACAGGT
ACAGGTAATACAATAAATGGTAATAATAATAATAATAGTGGTGGTAATAA
AAGTGGTGATAATATAATATTACCAAATCCATCAAGTTTATCAATTGCAA
ATAATAATAATATTAATAATAATAATGAAAATACATCATCACCAAAAGAA
ACATCATCACCACGTACAATTGGATCAAGTGAAGTACCAATTTTAATGAA
TTCAATGGATAATTTATTTAAATCAAGTTCACAATTAGATTTAAGATCTT
GTCAATACCTTTTAGAAGCATTAGGTAAATTATGTACACAATCATTTAAT
TTGAAATCATTTAATTCAACACCTAATATGTTTGGTATTTCAAAGTTACG
TGAAACTGCATTAGCAAATCTCTATAGAATCGATACAATATGGCCATTAA
TTTCAGATCATATCATTGATGCTGGTAATCATAGAAATCCATTATTTAGA
AAATATTCTGTTGAATTTTT
Gap no gap
Contig length 570
Chromosome number (1..6, M) 2
Chromosome length 8467578
Start point 207925
End point 208433
Strand (PLUS/MINUS) PLUS
Number of clones 1
Number of EST 1
Link to clone list U02735
List of clone(s) 

est1=AFH695Z,1,571
Translated Amino Acid sequence 
WILVLETLETWNRFLESFLKKKENSNNTQTTTGTGNTINGNNNNNSGGNKSGDNIILPNP
SSLSIANNNNINNNNENTSSPKETSSPRTIGSSEVPILMNSMDNLFKSSSQLDLRSCQYL
LEALGKLCTQSFNLKSFNSTPNMFGISKLRETALANLYRIDTIWPLISDHIIDAGNHRNP
LFRKYSVEF
Translated Amino Acid sequence (All Frames) 
Frame A:
ldtgfrnirnle*ifreffkekrefk*ytnnnryr*ynkw******ww**kw**ynitks
ikfinck***y*****kyiitkrniittynwik*stnfnefng*fi*ikftirfkilsip
frsir*imytii*feii*fnt*yvwyfkvt*ncisksl*nrynmainfrsyh*cw*s*ks
ii*kifc*if


Frame B:
WILVLETLETWNRFLESFLKKKENSNNTQTTTGTGNTINGNNNNNSGGNKSGDNIILPNP
SSLSIANNNNINNNNENTSSPKETSSPRTIGSSEVPILMNSMDNLFKSSSQLDLRSCQYL
LEALGKLCTQSFNLKSFNSTPNMFGISKLRETALANLYRIDTIWPLISDHIIDAGNHRNP
LFRKYSVEF


Frame C:
gywf*kh*klgidf*rvf*rkkriqiihkqqqvqviq*mviiiiivvvikvvii*yyqih
qvyqlqiiiiliiimkihhhqkkhhhhvqldqvkyqf**iqwiiylnqvhn*i*dlvntf
*kh*vnyvhnhli*nhliqhliclvfqsyvklh*qisiesiqygh*fqiislmlviieih
ylenillnf
own update 2004. 6. 9
Homology vs CSM-cDNA 
Query= Contig-U02735-1 (Contig-U02735-1Q)
/CSM_Contig/Contig-U02735-1Q.Seq.d
         (570 letters)

Database: CSM
           6905 sequences; 5,674,871 total letters


                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

Contig-U02735-1 (Contig-U02735-1Q) /CSM_Contig/Conti...   682  0.0
Contig-U11274-1 (Contig-U11274-1Q) /CSM_Contig/Conti...    42  6e-04
Contig-U10846-1 (Contig-U10846-1Q) /CSM_Contig/Conti...    42  6e-04
Contig-U10373-1 (Contig-U10373-1Q) /CSM_Contig/Conti...    38  0.010
Contig-U12528-1 (Contig-U12528-1Q) /CSM_Contig/Conti...    36  0.040
Contig-U10152-1 (Contig-U10152-1Q) /CSM_Contig/Conti...    36  0.040
Contig-U09371-1 (Contig-U09371-1Q) /CSM_Contig/Conti...    36  0.040
Contig-U14114-1 (Contig-U14114-1Q) /CSM_Contig/Conti...    34  0.16
Contig-U12862-1 (Contig-U12862-1Q) /CSM_Contig/Conti...    34  0.16
Contig-U12366-1 (Contig-U12366-1Q) /CSM_Contig/Conti...    34  0.16

>Contig-U02735-1 (Contig-U02735-1Q) /CSM_Contig/Contig-U02735-1Q.Seq.d
          Length = 570

 Score =  682 bits (344), Expect = 0.0
 Identities = 344/344 (100%)
 Strand = Plus / Plus

                                                                       
Query: 227 gaaaatacatcatcaccaaaagaaacatcatcaccacgtacaattggatcaagtgaagta 286
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 227 gaaaatacatcatcaccaaaagaaacatcatcaccacgtacaattggatcaagtgaagta 286

                                                                       
Query: 287 ccaattttaatgaattcaatggataatttatttaaatcaagttcacaattagatttaaga 346
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 287 ccaattttaatgaattcaatggataatttatttaaatcaagttcacaattagatttaaga 346

                                                                       
Query: 347 tcttgtcaataccttttagaagcattaggtaaattatgtacacaatcatttaatttgaaa 406
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 347 tcttgtcaataccttttagaagcattaggtaaattatgtacacaatcatttaatttgaaa 406

                                                                       
Query: 407 tcatttaattcaacacctaatatgtttggtatttcaaagttacgtgaaactgcattagca 466
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 407 tcatttaattcaacacctaatatgtttggtatttcaaagttacgtgaaactgcattagca 466

                                                                       
Query: 467 aatctctatagaatcgatacaatatggccattaatttcagatcatatcattgatgctggt 526
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 467 aatctctatagaatcgatacaatatggccattaatttcagatcatatcattgatgctggt 526

                                                       
Query: 527 aatcatagaaatccattatttagaaaatattctgttgaattttt 570
           ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 527 aatcatagaaatccattatttagaaaatattctgttgaattttt 570


 Score =  202 bits (102), Expect = 3e-52
 Identities = 102/102 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   ttggatactggttttagaaacattagaaacttggaatagatttttagagagttttttaaa 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   ttggatactggttttagaaacattagaaacttggaatagatttttagagagttttttaaa 60

                                                     
Query: 61  gaaaaaagagaattcaaataatacacaaacaacaacaggtac 102
           ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  gaaaaaagagaattcaaataatacacaaacaacaacaggtac 102


 Score = 97.6 bits (49), Expect = 1e-20
 Identities = 49/49 (100%)
 Strand = Plus / Plus

                                                            
Query: 151 aagtggtgataatataatattaccaaatccatcaagtttatcaattgca 199
           |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 151 aagtggtgataatataatattaccaaatccatcaagtttatcaattgca 199


>Contig-U11274-1 (Contig-U11274-1Q) /CSM_Contig/Contig-U11274-1Q.Seq.d
          Length = 1039

 Score = 42.1 bits (21), Expect = 6e-04
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 404 aaatcatttaattcaacacct 424
           |||||||||||||||||||||
Sbjct: 538 aaatcatttaattcaacacct 518


>Contig-U10846-1 (Contig-U10846-1Q) /CSM_Contig/Contig-U10846-1Q.Seq.d
          Length = 1559

 Score = 42.1 bits (21), Expect = 6e-04
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 423 ctaatatgtttggtatttcaaagtt 447
           ||||||||||||||||||| |||||
Sbjct: 914 ctaatatgtttggtatttccaagtt 890


  Database: CSM
    Posted date:  Jun 9, 2004  7:35 PM
  Number of letters in database: 5,674,871
  Number of sequences in database:  6905
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 11,128
Number of Sequences: 6905
Number of extensions: 11128
Number of successful extensions: 1302
Number of sequences better than 10.0: 419
length of query: 570
length of database: 5,674,871
effective HSP length: 16
effective length of query: 554
effective length of database: 5,564,391
effective search space: 3082672614
effective search space used: 3082672614
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 14 (28.2 bits)
dna update 2009. 5.20
Homology vs DNA 
Query= Contig-U02735-1 (Contig-U02735-1Q) /CSM_Contig/Contig-U02735-1Q.Seq.d
         (570 letters)

Database: ddbj_A
           102,105,510 sequences; 101,790,757,118 total letters

Searching..................................................done

                                                             Score    E
Sequences producing significant alignments:                  (bits) Value  N

(BJ343710) Dictyostelium discoideum cDNA clone:dda16m24, 3' ...   682   0.0    2
(AP006368) Lotus japonicus genomic DNA, chromosome 2, clone:...    40   0.016  2
(AC165500) Bos taurus clone CH240-176E14, WORKING DRAFT SEQU...    36   0.057  2
(AC174197) Bos taurus clone CH240-304G15, WORKING DRAFT SEQU...    36   0.058  2
(ED839170) Ynhw20039 HW-YUBAC Bos taurus genomic clone HW-YU...    36   0.074  2
(CU927998) S.lycopersicum DNA sequence from clone SL_MboI-78...    48   0.37   1
(AC105717) Rattus norvegicus clone CH230-184E22, *** SEQUENC...    48   0.37   1
(ET356505) S0179B08_T7 CHORI-214 Salmo salar genomic clone S...    48   0.37   1
(EJ918428) 1093018588161 Global-Ocean-Sampling_GS-30-02-01-1...    48   0.37   1
(EJ794126) 1093017391417 Global-Ocean-Sampling_GS-30-02-01-1...    48   0.37   1
(ED491266) MUGQ_CH252P123C22T7_CN92_093 CHORI-252 Vervet Mon...    48   0.37   1
(AC213010) Populus trichocarpa clone POP004-C07, complete se...    36   0.82   5
(AC186205) Canis Familiaris chromosome 7, clone XX-293N13, c...    46   1.5    1
(AC221747) Bos taurus clone CH240-387C11, WORKING DRAFT SEQU...    46   1.5    1
(AC218234) Bos taurus clone CH240-290A13, WORKING DRAFT SEQU...    46   1.5    1
(AC181417) Strongylocentrotus purpuratus clone R3-1112E16, W...    46   1.5    1
(AC179503) Strongylocentrotus purpuratus clone R3-1035H11, W...    46   1.5    1
(EJ194201) 1092344223477 Global-Ocean-Sampling_GS-27-01-01-1...    46   1.5    1
(DX525736) GH_MBb0047A22r GH_MBb Gossypium hirsutum genomic ...    46   1.5    1
(CE486590) tigr-gss-dog-17000365542576 Dog Library Canis lup...    46   1.5    1
(CE056372) tigr-gss-dog-17000322437005 Dog Library Canis lup...    46   1.5    1
(CC237854) CH261-96J15_Sp6.1 CH261 Gallus gallus genomic clo...    46   1.5    1
(DY772584) 5TH_new05_I09 Bicyclus anynana wings - 5TH instar...    46   1.5    1
(DY771907) 5TH_new03_L08 Bicyclus anynana wings - 5TH instar...    46   1.5    1
(AZ684495) ENTHN01TF Entamoeba histolytica Sheared DNA Entam...    32   2.8    3
(BX901908) Zebrafish DNA sequence from clone DKEY-268B12 in ...    32   2.8    2
(CT027549) Zebrafish DNA sequence *** SEQUENCING CANCELLED *...    32   2.9    2
(CT971489) Zebrafish DNA sequence from clone CH73-354H16 in ...    32   3.0    2
(CT027547) Zebrafish DNA sequence from clone CH73-228F11 in ...    32   3.0    2
(CR792414) Zebrafish DNA sequence from clone CH211-95O10 in ...    32   3.0    2
(AC022358) Homo sapiens chromosome 12 clone RP11-682J19 map ...    40   3.3    5
(EI457734) PV_GBa0059O22.f PV_GBa Phaseolus vulgaris genomic...    34   3.8    2
(AM471750) Vitis vinifera contig VV78X176250.4, whole genome...    44   4.3    2
(CT030648) Mouse DNA sequence from clone RP24-440M15 on chro...    44   5.8    1
(CT009630) Mouse DNA sequence from clone RP23-12B13 on chrom...    44   5.8    1
(AC164554) Mus musculus BAC clone RP23-351O14 from chromosom...    44   5.8    1
(AL953870) Human DNA sequence from clone RP11-97N5 on chromo...    44   5.8    1
(AC096643) Homo sapiens chromosome 1 clone RP11-408A22, comp...    44   5.8    1
(AC093562) Homo sapiens chromosome 1 clone RP11-553F10, comp...    44   5.8    1
(AC158846) Bos taurus clone CH240-353M4, WORKING DRAFT SEQUE...    44   5.8    1
(AC158104) Bos taurus clone CH240-54B8, WORKING DRAFT SEQUEN...    44   5.8    1
(AC147441) Gallus gallus chromosome UNK clone CH261-47N2, **...    44   5.8    1
(AC138166) Bos taurus clone RP42-394M23, WORKING DRAFT SEQUE...    44   5.8    1
(AC074169) Mus musculus clone RP23-49N16, WORKING DRAFT SEQU...    44   5.8    1
(AC073744) Mus musculus clone RP23-288A3, WORKING DRAFT SEQU...    44   5.8    1
(AC073724) Mus musculus clone RP23-215K14, WORKING DRAFT SEQ...    44   5.8    1
(AC184923) Bos taurus clone CH240-231J9, WORKING DRAFT SEQUE...    44   5.8    1
(AC180137) Strongylocentrotus purpuratus clone R3-4007F18, W...    44   5.8    1
(AZ642000) 1M0504N16R Mouse 10kb plasmid UUGC1M library Mus ...    44   5.8    1
(AZ641998) 1M0504N14R Mouse 10kb plasmid UUGC1M library Mus ...    44   5.8    1
(FH247140) CHO_OF3133xd24r1.ab1 CHO_OF3 Nicotiana tabacum ge...    44   5.8    1
(EJ510282) 1095407071454 Global-Ocean-Sampling_GS-28-01-01-1...    44   5.8    1
(EJ173009) 1092344090162 Global-Ocean-Sampling_GS-27-01-01-1...    44   5.8    1
(DX136770) OG_ABa0169E05.f OG_ABa Oryza granulata genomic cl...    44   5.8    1
(DU814134) OG_ABa0102I14.r OG_ABa Oryza granulata genomic cl...    44   5.8    1
(DU312370) 1098312022270 CHORI-243 Ovis aries genomic clone ...    44   5.8    1
(DU031701) 13061 Tomato HindIII BAC Library Solanum lycopers...    44   5.8    1
(CZ921149) 1098415568338 CHORI-243 Ovis aries genomic clone ...    44   5.8    1
(CT551733) A BAC library has been constructed from cultivar ...    44   5.8    1
(CT544616) A BAC library has been constructed from cultivar ...    44   5.8    1
(AG601547) Mus musculus molossinus DNA, clone:MSMg01-533K22....    44   5.8    1
(AG322998) Mus musculus molossinus DNA, clone:MSMg01-109P01....    44   5.8    1
(DB705438) Solanum lycopersicum cDNA, clone: LEFL1088CF06, 5...    44   5.8    1
(DB704851) Solanum lycopersicum cDNA, clone: LEFL1086DB02, 5...    44   5.8    1
(DB690655) Solanum lycopersicum cDNA, clone: LEFL1039DH03, 5...    44   5.8    1
(CV859792) gonad_EST07268 Embryonic gonad cDNA Library Gallu...    44   5.8    1
(BI927027) EST546916 tomato flower, 3 - 8 mm buds Solanum ly...    44   5.8    1
(BG643252) EST511446 tomato shoot/meristem Solanum lycopersi...    44   5.8    1
(BE874790) 601488729F1 NIH_MGC_69 Homo sapiens cDNA clone IM...    44   5.8    1
(AW738245) EST339672 tomato flower buds, anthesis, Cornell U...    44   5.8    1
(CP000678) Methanobrevibacter smithii ATCC 35061, complete g...    44   5.8    1
(CP000236) Ehrlichia chaffeensis str. Arkansas, complete gen...    44   5.8    1
(CP000112) Desulfovibrio desulfuricans G20, complete genome.       44   5.8    1
(AE017354) Legionella pneumophila subsp. pneumophila str. Ph...    44   5.8    1
(AL049185) Plasmodium falciparum DNA *** SEQUENCING IN PROGR...    32   9.4    9

>(BJ343710) Dictyostelium discoideum cDNA clone:dda16m24, 3' end,
           single read.
          Length = 571

 Score =  682 bits (344), Expect(2) = 0.0
 Identities = 344/344 (100%)
 Strand = Plus / Minus


Query: 227 gaaaatacatcatcaccaaaagaaacatcatcaccacgtacaattggatcaagtgaagta 286
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 345 gaaaatacatcatcaccaaaagaaacatcatcaccacgtacaattggatcaagtgaagta 286


Query: 287 ccaattttaatgaattcaatggataatttatttaaatcaagttcacaattagatttaaga 346
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 285 ccaattttaatgaattcaatggataatttatttaaatcaagttcacaattagatttaaga 226


Query: 347 tcttgtcaataccttttagaagcattaggtaaattatgtacacaatcatttaatttgaaa 406
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 225 tcttgtcaataccttttagaagcattaggtaaattatgtacacaatcatttaatttgaaa 166


Query: 407 tcatttaattcaacacctaatatgtttggtatttcaaagttacgtgaaactgcattagca 466
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 165 tcatttaattcaacacctaatatgtttggtatttcaaagttacgtgaaactgcattagca 106


Query: 467 aatctctatagaatcgatacaatatggccattaatttcagatcatatcattgatgctggt 526
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 105 aatctctatagaatcgatacaatatggccattaatttcagatcatatcattgatgctggt 46


Query: 527 aatcatagaaatccattatttagaaaatattctgttgaattttt 570
           ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 45  aatcatagaaatccattatttagaaaatattctgttgaattttt 2

 Score =  139 bits (70), Expect(2) = 0.0
 Identities = 70/70 (100%)
 Strand = Plus / Minus


Query: 1   ttggatactggttttagaaacattagaaacttggaatagatttttagagagttttttaaa 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 571 ttggatactggttttagaaacattagaaacttggaatagatttttagagagttttttaaa 512


Query: 61  gaaaaaagag 70
           ||||||||||
Sbjct: 511 gaaaaaagag 502

Lambda     K      H
    1.37    0.711     1.31

Matrix: blastn matrix:1 -3
Number of Sequences: 102105510
Number of Hits to DB: 605,921,851
Number of extensions: 38800993
Number of successful extensions: 3448120
Number of sequences better than 10.0: 76
Length of query: 570
Length of database: 101,790,757,118
Length adjustment: 23
Effective length of query: 547
Effective length of database: 99,442,330,388
Effective search space: 54394954722236
Effective search space used: 54394954722236
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)
protein update 2009. 7.21
Homology vs Protein 
Query= Contig-U02735-1 (Contig-U02735-1Q) /CSM_Contig/Contig-U02735-1Q.Seq.d
         (570 letters)

Database: nrp_B
           3,236,559 sequences; 1,051,180,864 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

(Q6GP04) RecName: Full=Protein MON2 homolog;  &BC073345_1(BC0733...    67   3e-10
AL834320_1(AL834320|pid:none) Homo sapiens mRNA; cDNA DKFZp761D2...    66   7e-10
AL833066_1(AL833066|pid:none) Homo sapiens mRNA; cDNA DKFZp451J0...    66   7e-10
BX537415_1(BX537415|pid:none) Homo sapiens mRNA; cDNA DKFZp686F0...    66   7e-10
BC144309_1(BC144309|pid:none) Homo sapiens MON2 homolog (S. cere...    66   7e-10
AB014059_1(AB014059|pid:none) Mus musculus SF21 mRNA, complete c...    66   7e-10
BC150943_1(BC150943|pid:none) Mus musculus MON2 homolog (yeast),...    66   7e-10
AX965605_1(AX965605|pid:none) Sequence 33 from Patent EP1375515....    65   1e-09
(Q80TL7) RecName: Full=Protein MON2 homolog; AltName: Full=Prote...    61   2e-08
AB028963_1(AB028963|pid:none) Homo sapiens mRNA for KIAA1040 pro...    61   2e-08
AY762831_1(AY762831|pid:none) Tetrahymena thermophila guanine nu...    52   1e-05
CR380951_26(CR380951|pid:none) Candida glabrata strain CBS138 ch...    40   0.034
J03918_1(J03918|pid:none) Yeast (S.cerevisaie) Sec7 gene encodin...    40   0.044
(Q9Y6D5) RecName: Full=Brefeldin A-inhibited guanine nucleotide-...    37   0.37
AB209397_1(AB209397|pid:none) Homo sapiens mRNA for ADP-ribosyla...    37   0.37
AY255526_1(AY255526|pid:none) Rattus norvegicus Brefeldin A-inhi...    37   0.37
AK155320_1(AK155320|pid:none) Mus musculus NOD-derived CD11c +ve...    37   0.37
AK302526_1(AK302526|pid:none) Homo sapiens cDNA FLJ55398 complet...    37   0.37
(Q19338) RecName: Full=Protein MON2 homolog;  &T20740(T20740;T23...    37   0.37
AK022623_1(AK022623|pid:none) Homo sapiens cDNA FLJ12561 fis, cl...    37   0.37
CR533425_1(CR533425|pid:none) Paramecium tetraurelia, complete g...    37   0.49
AF356651_1(AF356651|pid:none) Pichia pastoris Sec7p (SEC7) gene,...    35   1.8
CR954217_38(CR954217|pid:none) Ostreococcus tauri strain OTTH059...    34   2.4
AL022604_6(AL022604|pid:none) Arabidopsis thaliana DNA chromosom...    34   2.4
AL353871_15(AL353871|pid:none) Arabidopsis thaliana DNA chromoso...    33   4.1
AP008209_903(AP008209|pid:none) Oryza sativa (japonica cultivar-...    33   4.1
AL035538_32(AL035538|pid:none) Arabidopsis thaliana DNA chromoso...    33   4.1
AK227209_1(AK227209|pid:none) Arabidopsis thaliana mRNA for guan...    33   4.1
AC020622_9(AC020622|pid:none) Sequence of BAC F22M8 from Arabido...    33   5.4
CP000867_592(CP000867|pid:none) Methanococcus maripaludis C6, co...    33   5.4

>(Q6GP04) RecName: Full=Protein MON2 homolog;
            &BC073345_1(BC073345|pid:none)
          Length = 1721

 Score = 67.0 bits (162), Expect = 3e-10
 Identities = 32/97 (32%), Positives = 58/97 (59%), Gaps = 1/97 (1%)
 Frame = +2

Query: 278  SEVPILMNSMDNLFKSSSQLDLRSCQYLLEALGKLCTQSFNLK-SFNSTPNMFGISKLRE 454
            +++PI+ N +  LF+SS  LD  S  +L+ AL  L  ++ ++    N  P++F ++KL E
Sbjct: 742  TDLPIISNILSRLFESSQYLDDVSLHHLINALCSLSLEAMDMAYGNNKEPSLFAVAKLLE 801

Query: 455  TALANLYRIDTIWPLISDHIIDAGNHRNPLFRKYSVE 565
            T L N++RI+ +W  ++ H+I+   H N   R++  E
Sbjct: 802  TGLVNMHRIEILWRPLTGHLIEVCQHPNARMREWGAE 838

Lambda     K      H
   0.318    0.134    0.401

Gapped
Lambda     K      H
   0.267   0.0410    0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3236559
Number of Hits to DB: 550,812,157
Number of extensions: 8582369
Number of successful extensions: 15107
Number of sequences better than 10.0: 30
Number of HSP's gapped: 15104
Number of HSP's successfully gapped: 30
Length of query: 190
Length of database: 1,051,180,864
Length adjustment: 121
Effective length of query: 69
Effective length of database: 659,557,225
Effective search space: 45509448525
Effective search space used: 45509448525
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 30 (16.2 bits)
PSORT 

 psg: 0.75  gvh: 0.32  alm: 0.50  top: 0.53  tms: 0.00  mit: 0.20  mip: 0.00
 nuc: 0.00  erl: 0.00  erm: 0.00  pox: 0.00  px2: 0.00  vac: 0.33  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 1.00 

	 40.0 %: cytoplasmic
	 40.0 %: nuclear
	  8.0 %: cytoskeletal
	  8.0 %: vacuolar
	  4.0 %: mitochondrial

>> prediction for Contig-U02735-1 is cyt
VS (DIR, S) 0
VH (FL, L) 0
VF (FL, S) 0
AH (FL, L) 0
AF (FL, S) 1
SL (DIR, L) 0
SS (DIR, S) 0
SH (FL, L) 0
SF (FL, S) 0
CH (FL, L) 0
CF (FL, S) 0
FCL (DIR, L) 0
FC (DIR, S) 0
FC-IC (SUB) 0