| Contig-U14523-1 |
| Contig ID |
Contig-U14523-1 |
| Contig update |
2002.12.18 |
| Contig sequence |
 |
| Gap |
no gap |
| Contig length |
1208 |
| Chromosome number (1..6, M) |
3 |
| Chromosome length |
6358359 |
| Start point |
1931567 |
| End point |
1930358 |
| Strand (PLUS/MINUS) |
MINUS |
| Number of clones |
3 |
| Number of EST |
3 |
| Link to clone list |
U14523 |
| List of clone(s) |
|
| Translated Amino Acid sequence |
|
| Translated Amino Acid sequence (All Frames) |
|
| own update |
2004. 6.10 |
| Homology vs CSM-cDNA |
|
| dna update |
2008.12.24 |
| Homology vs DNA |
Query= Contig-U14523-1 (Contig-U14523-1Q) /CSM_Contig/Contig-U14523-1Q.Seq.d
(1208 letters)
Database: ddbj_A
92,845,959 sequences; 95,242,211,685 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value N
(BJ390130) Dictyostelium discoideum cDNA clone:dds21c09, 5' ... 1400 0.0 1
(BJ444036) Dictyostelium discoideum cDNA clone:ddv55b06, 3' ... 462 e-139 3
(AU074176) Dictyostelium discoideum slug cDNA, clone SSJ718. 270 3e-70 2
(AC116956) Dictyostelium discoideum chromosome 2 map 1418423... 42 2e-04 9
(AC008351) Drosophila melanogaster, chromosome 2R, region 59... 44 0.002 2
(AC008350) Drosophila melanogaster, chromosome 2R, region 58... 44 0.002 2
(AC008232) Drosophila melanogaster strain y chromosome 2 clo... 44 0.002 2
(AC020182) Drosophila melanogaster, *** SEQUENCING IN PROGRE... 44 0.002 2
(BT029100) Drosophila melanogaster IP14180 full insert cDNA. 44 0.003 2
(BT025148) Drosophila melanogaster IP04354 full insert cDNA. 44 0.003 2
(EL872431) IP04354.5prime IP Drosophila melanogaster iPCR Am... 44 0.003 2
(EL874258) IP14280.5prime IP Drosophila melanogaster iPCR Am... 44 0.003 2
(EL874257) IP14280.3prime IP Drosophila melanogaster iPCR Am... 44 0.003 2
(EL874010) IP14080.5prime IP Drosophila melanogaster iPCR Am... 44 0.003 2
(EL874009) IP14080.3prime IP Drosophila melanogaster iPCR Am... 44 0.003 2
(EL874128) IP14180.3prime IP Drosophila melanogaster iPCR Am... 44 0.003 2
(EL874361) IP14380.3prime IP Drosophila melanogaster iPCR Am... 44 0.003 2
(AC116960) Dictyostelium discoideum chromosome 2 map complem... 38 0.007 7
(EY375943) CAXA15904.fwd CAXA Helobdella robusta Subtracted ... 36 0.013 3
(AC132606) Mus musculus BAC clone RP23-434H18 from 8, comple... 36 0.032 2
(AC127997) Rattus norvegicus clone CH230-401M23, WORKING DRA... 38 0.032 2
(AC130675) Mus musculus chromosome 8, clone RP23-167D18, com... 36 0.032 2
(AL691517) Human DNA sequence from clone XXyac-12DB5 on chro... 36 0.032 2
(AC225286) Monodelphis domestica clone VMRC18-334H4, WORKING... 40 0.032 2
(EF432734) Litopenaeus vannamei relish mRNA, complete cds. 40 0.038 2
(AL495966) T. brucei sheared genomic DNA clone 345a10, rever... 46 0.039 2
(EX856161) CBNF3300.fwd CBNF Phycomyces blakesleeanus NRRL15... 40 0.042 2
(AC134037) Rattus norvegicus clone CH230-109L24, *** SEQUENC... 52 0.050 1
(AC119312) Rattus norvegicus clone CH230-342E8, WORKING DRAF... 52 0.050 1
(AC107473) Rattus norvegicus clone CH230-104D19, *** SEQUENC... 52 0.050 1
(EB575386) AGENCOURT_51186518 D. virilis EST Drosophila viri... 46 0.057 2
(AE014831) Plasmodium falciparum 3D7 chromosome 10 section 3... 34 0.063 11
(AC196818) Sorghum bicolor clone SB_BBc0005H14, complete seq... 48 0.079 4
(AE014296) Drosophila melanogaster chromosome 3L, complete s... 38 0.088 2
(AC123509) Rattus norvegicus clone CH230-85M17, *** SEQUENCI... 36 0.11 2
(AC099178) Rattus norvegicus clone CH230-114B1, *** SEQUENCI... 38 0.12 2
(AC121387) Rattus norvegicus clone CH230-179E15, WORKING DRA... 36 0.12 2
(AC090963) Mus musculus strain C57BL/6J chromosome 17 clone ... 38 0.12 2
(AC134500) Rattus norvegicus clone CH230-500H10, *** SEQUENC... 34 0.12 2
(AC090653) Mus musculus strain C57BL/6J chromosome 17 clone ... 38 0.12 2
(AF549257) Mus musculus strain C57BL/6J chromosome 17 clone ... 38 0.12 2
(AC091218) Drosophila melanogaster 3L BAC RP98-3E24 (Roswell... 38 0.12 2
(AC117900) Rattus norvegicus clone CH230-320C16, *** SEQUENC... 38 0.12 2
(AC010022) Drosophila melanogaster 3L BAC RP98-1E12 (Roswell... 38 0.12 2
(AC194668) Pan troglodytes BAC clone CH251-241H21 from chrom... 36 0.12 2
(AY190953) Drosophila virilis clone DVIF01_19_E15 (D1419) ge... 36 0.13 2
(AL400710) T3 end of clone AS0AA023C09 of library AS0AA from... 36 0.15 2
(EY312849) CAWX24624.fwd CAWX Helobdella robusta Primary Ear... 38 0.15 2
(EB601281) AGENCOURT_56963715 D. grimshawi EST Drosophila gr... 36 0.15 2
(FG816668) UCRVU04_CCNI3694_g1 Cowpea 524B Mixed Tissue and ... 36 0.15 2
(FF400644) MOOG076TF MOO Vigna unguiculata cDNA 5', mRNA seq... 36 0.15 2
(FF552791) MOPEY93TF MOP Vigna unguiculata cDNA 5', mRNA seq... 36 0.15 2
(AU037837) Dictyostelium discoideum slug cDNA, clone SSE355. 36 0.15 2
(C91001) Dictyostelium discoideum slug cDNA, clone SSJ551. 36 0.15 2
(EC195102) 76907 CK01 Drosophila melanogaster cDNA clone CK0... 38 0.15 2
(AU033391) Dictyostelium discoideum slug cDNA, clone SLA713. 36 0.15 2
(AL928791) Mouse DNA sequence from clone RP23-65N20 on chrom... 50 0.20 1
(CU633901) Podospora anserina genomic DNA chromosome 1, supe... 50 0.20 1
(AC133506) Mus musculus chromosome UNK clone RP24-238D18, WO... 50 0.20 1
(AC188728) Zea mays chromosome 4 clone CH201-171P20; ZMMBBc0... 50 0.20 1
(AM650913) Entamoeba moshkovskii FIC GSS, clone mosh084c03.p1k. 50 0.20 1
(AY293825) Dictyostelium discoideum transposon cluster; tRNA... 34 0.25 7
(AC171134) Helobdella robusta clone CH306-1A5, complete sequ... 36 0.28 8
(BH846523) SALK_008550.50.70.x Arabidopsis thaliana TDNA ins... 40 0.30 2
(AL844506) Plasmodium falciparum chromosome 7. 38 0.41 11
(AF153362) Dictyostelium discoideum adenylyl cyclase (acrA) ... 34 0.41 5
(AC115269) Rattus norvegicus clone CH230-218J11, *** SEQUENC... 36 0.42 2
(BX248416) Zebrafish DNA sequence from clone DKEY-75L1 in li... 42 0.42 8
(AC111628) Rattus norvegicus clone CH230-91N21, *** SEQUENCI... 36 0.42 2
(AC105503) Rattus norvegicus clone CH230-200D5, *** SEQUENCI... 36 0.42 2
(AC119562) Rattus norvegicus clone CH230-24L11, *** SEQUENCI... 36 0.42 2
(AC097158) Rattus norvegicus clone CH230-140A18, *** SEQUENC... 36 0.42 2
(AC105669) Rattus norvegicus clone CH230-64A8, *** SEQUENCIN... 34 0.42 2
(AC127118) Rattus norvegicus clone CH230-92K6, WORKING DRAFT... 36 0.42 2
(AL844873) Mouse DNA sequence from clone RP23-26H8 on chromo... 34 0.43 2
(AC135518) Rattus norvegicus clone CH230-87F4, *** SEQUENCIN... 36 0.43 2
(AC119882) Mus musculus clone RP24-93G1, WORKING DRAFT SEQUE... 34 0.43 2
(AC121212) Rattus norvegicus clone CH230-131A24, *** SEQUENC... 36 0.43 2
(AC137227) Rattus norvegicus clone CH230-unknown, *** SEQUEN... 34 0.43 2
(AC135409) Rattus norvegicus 8 BAC CH230-416D7 (Children's H... 36 0.43 2
(AC136813) Rattus norvegicus clone CH230-102O15, *** SEQUENC... 36 0.43 2
(AC097762) Rattus norvegicus clone CH230-45I8, WORKING DRAFT... 36 0.43 2
(AC164176) Mus musculus 10 BAC RP23-8O18 (Roswell Park Cance... 34 0.43 2
(AC133776) Rattus norvegicus clone CH230-189J5, *** SEQUENCI... 36 0.43 2
(AC150560) Mus musculus BAC clone RP23-16I14 from 15, comple... 34 0.43 2
(CR376742) Zebrafish DNA sequence from clone CH211-207C17 in... 34 0.43 2
(AC161269) Mus musculus BAC clone RP23-120K16 from chromosom... 34 0.43 2
(AC083909) Mus musculus 1 BAC RP23-424A2 (Roswell Park Cance... 36 0.43 2
(AC120004) Mus musculus chromosome 5, clone RP24-150N15, com... 34 0.43 2
(AC084045) Mus musculus chromosome 1 clone RP23-357A20, WORK... 36 0.43 2
(AC168279) Mus musculus 10 BAC RP23-345H24 (Roswell Park Can... 34 0.43 2
(AC122466) Mus musculus BAC clone RP24-304N8 from chromosome... 34 0.43 2
(AC149590) Mus musculus BAC clone RP23-348L9 from chromosome... 34 0.43 2
(CU467529) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 36 0.43 2
(AC163450) Mus musculus chromosome 1, clone RP23-209F20, com... 36 0.43 2
(AC126315) Rattus norvegicus clone CH230-409C19, *** SEQUENC... 38 0.43 2
(AC141189) Rattus norvegicus clone CH230-343I21, WORKING DRA... 36 0.43 2
(AC102231) Mus musculus chromosome 18, clone RP24-76A21, com... 34 0.43 2
(AC126933) Mus musculus BAC clone RP24-117M7 from chromosome... 36 0.43 2
(AC114251) Rattus norvegicus clone CH230-343K20, WORKING DRA... 36 0.43 2
>(BJ390130) Dictyostelium discoideum cDNA clone:dds21c09, 5' end,
single read.
Length = 706
Score = 1400 bits (706), Expect = 0.0
Identities = 706/706 (100%)
Strand = Plus / Plus
Query: 1 taatttggttttatttctcaattacttatttctttggtgagggtctatcaaatttaatgt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 taatttggttttatttctcaattacttatttctttggtgagggtctatcaaatttaatgt 60
Query: 61 tattaaattttgaatgttttacaatattttttgaaactgttcaaacattgattaaatatt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tattaaattttgaatgttttacaatattttttgaaactgttcaaacattgattaaatatt 120
Query: 121 caattcatttattcgatttatcatcagaagatgtttgggataaaagaggacaatatattt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 caattcatttattcgatttatcatcagaagatgtttgggataaaagaggacaatatattt 180
Query: 181 attatacagagttttcaacagattcagtaattttagcaggaacttgtgcacatttaattc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 attatacagagttttcaacagattcagtaattttagcaggaacttgtgcacatttaattc 240
Query: 241 atattattattattcaagggtttacaccaactttattacatgttgtaatgtttttctact 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 atattattattattcaagggtttacaccaactttattacatgttgtaatgtttttctact 300
Query: 301 ttaagatggtgtttggaaatttaaatagaaagattacagcatatagaaactattgtaaat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ttaagatggtgtttggaaatttaaatagaaagattacagcatatagaaactattgtaaat 360
Query: 361 taacttcagatatggataattgttatccaaatgtaggtgaaaaagatttagagaattata 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 taacttcagatatggataattgttatccaaatgtaggtgaaaaagatttagagaattata 420
Query: 421 atgatgattgtgcaatttgtagagatagaatggttaccgctaaaaaattaccatgtggtc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 atgatgattgtgcaatttgtagagatagaatggttaccgctaaaaaattaccatgtggtc 480
Query: 481 atatatttcatcattcttgtttaagagcatggttagaacaacatcactcatgtccaactt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 atatatttcatcattcttgtttaagagcatggttagaacaacatcactcatgtccaactt 540
Query: 541 gtagaagatcattaattgatgaacatcaacatcatttaggtaataatggtacagcaacag 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 gtagaagatcattaattgatgaacatcaacatcatttaggtaataatggtacagcaacag 600
Query: 601 caacaatagcaggagcatcaggggtaacaacaacaacaactataaatgggtggtacagga 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 caacaatagcaggagcatcaggggtaacaacaacaacaactataaatgggtggtacagga 660
Query: 661 tcaacatcagcatcgacagcaatagatccattatcaattacatcac 706
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 tcaacatcagcatcgacagcaatagatccattatcaattacatcac 706
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Number of Sequences: 92845959
Number of Hits to DB: 1,380,920,717
Number of extensions: 95137574
Number of successful extensions: 12485163
Number of sequences better than 10.0: 1393
Length of query: 1208
Length of database: 95,242,211,685
Length adjustment: 24
Effective length of query: 1184
Effective length of database: 97,308,875,965
Effective search space: 115213709142560
Effective search space used: 115213709142560
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)
|
| protein update |
2009. 7.11 |
| Homology vs Protein |
Query= Contig-U14523-1 (Contig-U14523-1Q) /CSM_Contig/Contig-U14523-1Q.Seq.d
(1208 letters)
Database: nrp_B
3,236,559 sequences; 1,051,180,864 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC057411_1(BC057411|pid:none) Danio rerio autocrine motility fac... 156 1e-36
BC112457_1(BC112457|pid:none) Bos taurus autocrine motility fact... 150 1e-34
BC060333_1(BC060333|pid:none) Xenopus laevis hypothetical protei... 149 1e-34
(Q9UKV5) RecName: Full=Autocrine motility factor receptor, isofo... 149 3e-34
AB169185_1(AB169185|pid:none) Macaca fascicularis testis cDNA, c... 149 3e-34
AF124144_1(AF124144|pid:none) Mus musculus autocrine motility fa... 149 3e-34
CQ834480_1(CQ834480|pid:none) Sequence 351 from Patent WO2004058... 149 3e-34
BC148207_1(BC148207|pid:none) Homo sapiens cDNA clone IMAGE:4011... 122 3e-26
AK073960_1(AK073960|pid:none) Oryza sativa Japonica Group cDNA c... 119 2e-25
AC144806_14(AC144806|pid:none) Medicago truncatula clone mth2-34... 115 3e-24
AC009360_4(AC009360|pid:none) Arabidopsis thaliana chromosome 1 ... 114 5e-24
AB189470_1(AB189470|pid:none) Arabidopsis thaliana At HRD1 mRNA ... 113 1e-23
AC146575_24(AC146575|pid:none) Medicago truncatula clone mth2-14... 112 3e-23
CR954210_171(CR954210|pid:none) Ostreococcus tauri strain OTTH05... 110 8e-23
(Q803I8) RecName: Full=E3 ubiquitin-protein ligase synoviolin; ... 109 2e-22
BC044465_1(BC044465|pid:none) Danio rerio synovial apoptosis inh... 109 2e-22
BC066677_1(BC066677|pid:none) Danio rerio synovial apoptosis inh... 109 2e-22
BX323077_5(BX323077|pid:none) Zebrafish DNA sequence from clone ... 109 2e-22
AB012247_13(AB012247|pid:none) Arabidopsis thaliana genomic DNA,... 107 6e-22
AL834262_1(AL834262|pid:none) Homo sapiens mRNA; cDNA DKFZp761J1... 102 4e-20
AB085847_1(AB085847|pid:none) Homo sapiens mRNA for HRD1, comple... 102 4e-20
BC166727_1(BC166727|pid:none) Rattus norvegicus synovial apoptos... 102 4e-20
AK072721_1(AK072721|pid:none) Oryza sativa Japonica Group cDNA c... 101 6e-20
AE017348_262(AE017348|pid:none) Cryptococcus neoformans var. neo... 100 8e-20
(Q5XHH7) RecName: Full=E3 ubiquitin-protein ligase synoviolin-B;... 100 1e-19
AB058713_1(AB058713|pid:none) Homo sapiens mRNA for KIAA1810 pro... 99 3e-19
AB384298_1(AB384298|pid:none) Synthetic construct DNA, clone: pF... 99 3e-19
AK122558_1(AK122558|pid:none) Mus musculus premature mRNA for mK... 99 3e-19
AM118080_95(AM118080|pid:none) Ustilago hordei mating type regio... 98 5e-19
BT064920_1(BT064920|pid:none) Zea mays full-length cDNA clone ZM... 96 3e-18
AY072178_1(AY072178|pid:none) Arabidopsis thaliana unknown prote... 95 6e-18
(Q95SP2) RecName: Full=E3 ubiquitin-protein ligase HRD1; ... 94 1e-17
BT003751_1(BT003751|pid:none) Drosophila melanogaster RH56454 fu... 93 2e-17
EU969846_1(EU969846|pid:none) Zea mays clone 336407 protein bind... 92 4e-17
(A8Y4B2) RecName: Full=E3 ubiquitin-protein ligase hrd-1; AltNam... 87 9e-16
(O74757) RecName: Full=ERAD-associated E3 ubiquitin-protein liga... 87 1e-15
(Q20798) RecName: Full=E3 ubiquitin-protein ligase hrd-1; AltNam... 87 2e-15
AL035396_7(AL035396|pid:none) Arabidopsis thaliana DNA chromosom... 86 3e-15
AP007151_567(AP007151|pid:none) Aspergillus oryzae RIB40 genomic... 83 2e-14
FN315064_1(FN315064|pid:none) Schistosoma japonicum isolate Anhu... 83 2e-14
FN320159_1(FN320159|pid:none) Schistosoma japonicum isolate Anhu... 83 2e-14
FN320158_1(FN320158|pid:none) Schistosoma japonicum isolate Anhu... 83 2e-14
AM910995_268(AM910995|pid:none) Plasmodium knowlesi strain H chr... 81 7e-14
AM270376_22(AM270376|pid:none) Aspergillus niger contig An16c024... 81 9e-14
BT069680_1(BT069680|pid:none) Zea mays full-length cDNA clone ZM... 79 3e-13
(P90859) RecName: Full=E3 ubiquitin-protein ligase hrd-like prot... 79 4e-13
AM920435_990(AM920435|pid:none) Penicillium chrysogenum Wisconsi... 78 7e-13
CU640366_1272(CU640366|pid:none) Podospora anserina genomic DNA ... 76 3e-12
CR382132_125(CR382132|pid:none) Yarrowia lipolytica strain CLIB1... 73 2e-11
EU976317_1(EU976317|pid:none) Zea mays clone 705915 hypothetical... 72 5e-11
AJ564266_1(AJ564266|pid:none) Yarrowia lipolytica hrd1 gene. 71 9e-11
AL391737_73(AL391737|pid:none) chromosome I of strain GB-M1 of E... 70 2e-10
FN313747_1(FN313747|pid:none) Schistosoma japonicum isolate Anhu... 67 1e-09
AF064801_1(AF064801|pid:none) Homo sapiens multiple membrane spa... 63 2e-08
(Q8WU17) RecName: Full=RING finger protein 139; AltName: Full=Tr... 63 2e-08
BC017043_1(BC017043|pid:none) Homo sapiens autocrine motility fa... 62 4e-08
BC067995_1(BC067995|pid:none) Xenopus tropicalis ring finger pro... 62 4e-08
CR382131_286(CR382131|pid:none) Yarrowia lipolytica strain CLIB1... 61 7e-08
(Q08109) RecName: Full=ERAD-associated E3 ubiquitin-protein liga... 61 9e-08
EU965111_1(EU965111|pid:none) Zea mays clone 283897 ubiquitin-pr... 60 1e-07
CT737139_3(CT737139|pid:none) Zebrafish DNA sequence from clone ... 60 1e-07
AC002409_3(AC002409|pid:none) Arabidopsis thaliana chromosome 2 ... 60 1e-07
AY045983_1(AY045983|pid:none) Arabidopsis thaliana unknown prote... 60 2e-07
(Q91YL2) RecName: Full=RING finger protein 126; &AK154781_1(AK1... 60 2e-07
AJ720916_1(AJ720916|pid:none) Gallus gallus mRNA for hypothetica... 60 2e-07
FJ640556_1(FJ640556|pid:none) Triticum aestivum cultivar Zhongyo... 60 2e-07
AK033506_1(AK033506|pid:none) Mus musculus adult male colon cDNA... 60 2e-07
AK000559_1(AK000559|pid:none) Homo sapiens cDNA FLJ20552 fis, cl... 59 3e-07
BC161975_1(BC161975|pid:none) Rattus norvegicus ring finger prot... 59 3e-07
BC099810_1(BC099810|pid:none) Rattus norvegicus ring finger prot... 59 3e-07
(Q9BV68) RecName: Full=RING finger protein 126; &BC001442_1(BC0... 59 3e-07
AY081329_1(AY081329|pid:none) Arabidopsis thaliana ABI3-interact... 59 3e-07
EU954580_1(EU954580|pid:none) Zea mays clone 1471379 protein bin... 59 3e-07
BT069968_1(BT069968|pid:none) Zea mays full-length cDNA clone ZM... 59 3e-07
AK096397_1(AK096397|pid:none) Homo sapiens cDNA FLJ39078 fis, cl... 59 5e-07
AM502233_138(AM502233|pid:none) Leishmania infantum chromosome 15. 59 5e-07
AK133342_1(AK133342|pid:none) Mus musculus adult male testis cDN... 59 5e-07
(Q9ULT6) RecName: Full=Zinc/RING finger protein 3; AltName: Full... 59 5e-07
AE014297_876(AE014297|pid:none) Drosophila melanogaster chromoso... 59 5e-07
CT005254_147(CT005254|pid:none) Leishmania major strain Friedlin... 59 5e-07
AB051436_1(AB051436|pid:none) Homo sapiens mRNA for KIAA1133 pro... 59 5e-07
(Q5SSZ7) RecName: Full=Zinc/RING finger protein 3; Flags: Precur... 59 5e-07
AB384120_1(AB384120|pid:none) Synthetic construct DNA, clone: pF... 59 5e-07
BC151080_1(BC151080|pid:none) Mus musculus zinc and ring finger ... 59 5e-07
AC006712_2(AC006712|pid:none) Caenorhabditis elegans cosmid Y119... 58 8e-07
CR848559_1(CR848559|pid:none) Xenopus tropicalis finished cDNA, ... 58 8e-07
(Q6IRP0) RecName: Full=RING finger protein 126-B; &BC070697_1(B... 58 8e-07
(Q6DIP3) RecName: Full=RING finger protein 126; &BC075492_1(BC0... 58 8e-07
AP005871_22(AP005871|pid:none) Oryza sativa Japonica Group genom... 57 1e-06
AM269999_3(AM269999|pid:none) Aspergillus niger contig An02c0040... 57 1e-06
(Q7T0Q3) RecName: Full=RING finger protein 126-A; &BC056088_1(B... 57 1e-06
AC151824_8(AC151824|pid:none) Medicago truncatula clone mth2-45n... 57 1e-06
AM479559_1(AM479559|pid:none) Vitis vinifera contig VV78X210188.... 57 1e-06
BC160659_1(BC160659|pid:none) Danio rerio zgc:175173, mRNA (cDNA... 57 1e-06
EU965227_1(EU965227|pid:none) Zea mays clone 284641 hypothetical... 57 1e-06
BC055485_1(BC055485|pid:none) Mus musculus ring finger protein 1... 57 1e-06
AK075101_1(AK075101|pid:none) Homo sapiens cDNA FLJ90620 fis, cl... 57 1e-06
AF387786_1(AF387786|pid:none) Drosophila melanogaster TRC8 mRNA,... 57 1e-06
BT001260_1(BT001260|pid:none) Drosophila melanogaster AT02461 fu... 57 1e-06
AK304228_1(AK304228|pid:none) Homo sapiens cDNA FLJ55623 complet... 57 1e-06
BC042684_1(BC042684|pid:none) Homo sapiens ring finger protein 1... 57 1e-06
AK294323_1(AK294323|pid:none) Homo sapiens cDNA FLJ60012 complet... 57 1e-06
AE014297_4561(AE014297|pid:none) Drosophila melanogaster chromos... 57 1e-06
(Q96MT1) RecName: Full=RING finger protein 145; &AX213274_1(AX2... 57 1e-06
AY122250_1(AY122250|pid:none) Drosophila melanogaster SD05665 fu... 57 1e-06
EU969915_1(EU969915|pid:none) Zea mays clone 337224 RHC1A mRNA, ... 57 1e-06
AK106003_1(AK106003|pid:none) Oryza sativa Japonica Group cDNA c... 57 1e-06
(Q7KRW1) RecName: Full=Protein TRC8 homolog; &AE014297_4560(AE0... 57 1e-06
AK062015_1(AK062015|pid:none) Oryza sativa Japonica Group cDNA c... 57 1e-06
FN392322_465(FN392322|pid:none) Pichia pastoris GS115 chromosome... 57 1e-06
EU956162_1(EU956162|pid:none) Zea mays clone 1558311 RHC1A mRNA,... 57 1e-06
(Q5SWK7) RecName: Full=RING finger protein 145; &AL603913_1(AL6... 57 1e-06
AE014297_4558(AE014297|pid:none) Drosophila melanogaster chromos... 57 1e-06
AK043002_1(AK043002|pid:none) Mus musculus 7 days neonate cerebe... 57 1e-06
BC051064_1(BC051064|pid:none) Mus musculus ring finger protein 1... 57 1e-06
AK014408_1(AK014408|pid:none) Mus musculus 12 days embryo embryo... 57 1e-06
BC149767_1(BC149767|pid:none) Bos taurus ring finger protein 145... 57 1e-06
BC148080_1(BC148080|pid:none) Bos taurus ring finger protein 145... 57 1e-06
AK056513_1(AK056513|pid:none) Homo sapiens cDNA FLJ31951 fis, cl... 57 1e-06
AB025631_20(AB025631|pid:none) Arabidopsis thaliana genomic DNA,... 57 2e-06
AK118283_1(AK118283|pid:none) Arabidopsis thaliana At3g19950 mRN... 57 2e-06
AY095995_1(AY095995|pid:none) Arabidopsis thaliana AT3g19950/MPN... 57 2e-06
BC133164_1(BC133164|pid:none) Danio rerio cDNA clone MGC:158807 ... 57 2e-06
AE017345_324(AE017345|pid:none) Cryptococcus neoformans var. neo... 56 2e-06
EF148380_1(EF148380|pid:none) Populus trichocarpa x Populus delt... 56 2e-06
(Q9LZV8) RecName: Full=RING-H2 finger protein ATL5A; &AK229217_... 56 2e-06
AL356173_8(AL356173|pid:none) Neurospora crassa DNA linkage grou... 56 2e-06
AE013599_4255(AE013599|pid:none) Drosophila melanogaster chromos... 56 2e-06
AL161577_3(AL161577|pid:none) Arabidopsis thaliana DNA chromosom... 56 2e-06
AY054187_1(AY054187|pid:none) Arabidopsis thaliana AT4g30400/F17... 56 2e-06
BT037305_1(BT037305|pid:none) Zea mays full-length cDNA clone ZM... 56 3e-06
BT036735_1(BT036735|pid:none) Zea mays full-length cDNA clone ZM... 56 3e-06
EU959798_1(EU959798|pid:none) Zea mays clone 220058 RHC1A mRNA, ... 56 3e-06
JC1495(JC1495) regulatory protein G1 - fruit fly (Drosophila mel... 56 3e-06
AK008329_1(AK008329|pid:none) Mus musculus adult male small inte... 56 3e-06
AK070491_1(AK070491|pid:none) Oryza sativa Japonica Group cDNA c... 56 3e-06
AC007576_29(AC007576|pid:none) Arabidopsis thaliana chromosome I... 56 3e-06
FN357920_15(FN357920|pid:none) Schistosoma mansoni genome sequen... 55 4e-06
CT005272_303(CT005272|pid:none) Leishmania major strain Friedlin... 55 4e-06
AK229330_1(AK229330|pid:none) Arabidopsis thaliana mRNA for hypo... 55 4e-06
CP000882_94(CP000882|pid:none) Hemiselmis andersenii chromosome ... 55 4e-06
EU824031_1(EU824031|pid:none) Populus tremula isolate swl312-75 ... 55 5e-06
EU824016_1(EU824016|pid:none) Populus tremula isolate swl312-14 ... 55 5e-06
(Q0IJ20) RecName: Full=RING finger protein 145; &BC121248_1(BC1... 55 5e-06
BC074178_1(BC074178|pid:none) Xenopus laevis MGC82010 protein, m... 55 5e-06
EU824036_1(EU824036|pid:none) Populus tremula isolate swl312-85 ... 55 5e-06
(Q7TPV2) RecName: Full=E3 ubiquitin-protein ligase DZIP3; ... 55 5e-06
EU824051_1(EU824051|pid:none) Populus tremula isolate swl312-64E... 55 5e-06
BC117953_1(BC117953|pid:none) Mus musculus DAZ interacting prote... 55 5e-06
EF147412_1(EF147412|pid:none) Populus trichocarpa clone WS01230_... 55 5e-06
EU824018_1(EU824018|pid:none) Populus tremula isolate swl312-16 ... 55 5e-06
(Q9Y4L5) RecName: Full=RING finger protein 115; AltName: Full=Zi... 55 5e-06
AL079314_1(AL079314|pid:none) Homo sapiens mRNA full length inse... 55 5e-06
EU824014_1(EU824014|pid:none) Populus tremula isolate swl312-3 t... 55 5e-06
EU824032_1(EU824032|pid:none) Populus tremula isolate swl312-76 ... 55 5e-06
(Q7ZWF4) RecName: Full=RING finger protein 145; &BC049437_1(BC0... 55 5e-06
U67953_1(U67953|pid:none) Caenorhabditis elegans cosmid ZC13, co... 55 7e-06
AP005720_22(AP005720|pid:none) Oryza sativa Japonica Group genom... 55 7e-06
FM992695_566(FM992695|pid:none) Candida dubliniensis CD36 chromo... 55 7e-06
AC097175_11(AC097175|pid:none) Oryza sativa (japonica cultivar-g... 54 9e-06
BT034303_1(BT034303|pid:none) Zea mays full-length cDNA clone ZM... 54 9e-06
BC124034_1(BC124034|pid:none) Xenopus tropicalis ring finger pro... 54 9e-06
(Q5BIY5) RecName: Full=RING finger protein 145; &BC091708_1(BC0... 54 9e-06
AY815260_1(AY815260|pid:none) Schistosoma japonicum SJCHGC06586 ... 54 9e-06
CR954217_56(CR954217|pid:none) Ostreococcus tauri strain OTTH059... 54 9e-06
AK103314_1(AK103314|pid:none) Oryza sativa Japonica Group cDNA c... 54 9e-06
(Q6NRX0) RecName: Full=E3 ubiquitin-protein ligase RNF149; ... 54 9e-06
BT068134_1(BT068134|pid:none) Zea mays full-length cDNA clone ZM... 54 9e-06
BX957281_1(BX957281|pid:none) Zebrafish DNA sequence from clone ... 54 9e-06
EU960987_1(EU960987|pid:none) Zea mays clone 230224 RHC1A mRNA, ... 54 1e-05
AK130520_1(AK130520|pid:none) Homo sapiens cDNA FLJ27010 fis, cl... 54 1e-05
(Q9ULK6) RecName: Full=RING finger protein 150; Flags: Precursor; 54 1e-05
AB033040_1(AB033040|pid:none) Homo sapiens mRNA for KIAA1214 pro... 54 1e-05
BC101992_1(BC101992|pid:none) Homo sapiens ring finger protein 1... 54 1e-05
AB384141_1(AB384141|pid:none) Synthetic construct DNA, clone: pF... 54 1e-05
BT034350_1(BT034350|pid:none) Zea mays full-length cDNA clone ZM... 54 1e-05
BT051302_1(BT051302|pid:none) Medicago truncatula clone MTYF1_F2... 54 1e-05
AL049638_21(AL049638|pid:none) Arabidopsis thaliana DNA chromoso... 54 1e-05
AK098524_1(AK098524|pid:none) Homo sapiens cDNA FLJ25658 fis, cl... 54 1e-05
BC168034_1(BC168034|pid:none) Xenopus tropicalis cDNA clone MGC:... 53 2e-05
AC129090_8(AC129090|pid:none) Medicago truncatula clone mth2-14i... 53 2e-05
AC087182_2(AC087182|pid:none) Oryza sativa chromosome 10 BAC OSJ... 53 2e-05
AP008216_900(AP008216|pid:none) Oryza sativa (japonica cultivar-... 53 2e-05
AC003000_2(AC003000|pid:none) Arabidopsis thaliana chromosome 2 ... 53 2e-05
BC079688_1(BC079688|pid:none) Xenopus laevis MGC80300 protein, m... 53 2e-05
EU972072_1(EU972072|pid:none) Zea mays clone 374439 RING-H2 fing... 53 2e-05
BT074946_1(BT074946|pid:none) Osmerus mordax clone omor-eva-511-... 53 2e-05
AC020646_33(AC020646|pid:none) Genomic sequence for Arabidopsis ... 53 2e-05
AK066326_1(AK066326|pid:none) Oryza sativa Japonica Group cDNA c... 53 2e-05
AE017343_489(AE017343|pid:none) Cryptococcus neoformans var. neo... 53 2e-05
BC168458_1(BC168458|pid:none) Xenopus tropicalis cDNA clone MGC:... 53 2e-05
EU953261_1(EU953261|pid:none) Zea mays clone 1394374 RING finger... 53 2e-05
BC069019_1(BC069019|pid:none) Homo sapiens zinc and ring finger ... 53 2e-05
EU965176_1(EU965176|pid:none) Zea mays clone 284301 protein bind... 53 2e-05
AM469216_4(AM469216|pid:none) Vitis vinifera contig VV78X201907.... 53 2e-05
AL161533_31(AL161533|pid:none) Arabidopsis thaliana DNA chromoso... 52 3e-05
AL627187_2(AL627187|pid:none) Mouse DNA sequence from clone RP23... 52 3e-05
AL357612_8(AL357612|pid:none) Arabidopsis thaliana DNA chromosom... 52 3e-05
AF171875_1(AF171875|pid:none) Mus musculus g1-related zinc finge... 52 3e-05
AP007162_118(AP007162|pid:none) Aspergillus oryzae RIB40 genomic... 52 3e-05
AC011708_11(AC011708|pid:none) Arabidopsis thaliana chromosome I... 52 3e-05
(Q8VEM1) RecName: Full=Goliath homolog; AltName: Full=RING finge... 52 3e-05
AK117658_1(AK117658|pid:none) Arabidopsis thaliana At5g08139 mRN... 52 3e-05
(Q95K04) RecName: Full=RING finger protein 133; &AB070023_1(AB0... 52 3e-05
AL080318_3(AL080318|pid:none) Arabidopsis thaliana DNA chromosom... 52 3e-05
AM270092_2(AM270092|pid:none) Aspergillus niger contig An04c0310... 52 3e-05
EU960255_1(EU960255|pid:none) Zea mays clone 222914 RHC1A mRNA, ... 52 3e-05
AM920436_1954(AM920436|pid:none) Penicillium chrysogenum Wiscons... 52 3e-05
BT033181_1(BT033181|pid:none) Zea mays full-length cDNA clone ZM... 52 3e-05
AM464293_2(AM464293|pid:none) Vitis vinifera contig VV78X098348.... 52 4e-05
CP001160_180(CP001160|pid:none) Thalassiosira pseudonana CCMP133... 52 4e-05
AF155650_1(AF155650|pid:none) Human mRNA for goliath protein. &... 52 4e-05
BC142200_1(BC142200|pid:none) Bos taurus ring finger protein 130... 52 4e-05
AK241435_1(AK241435|pid:none) Oryza sativa Japonica Group cDNA, ... 52 4e-05
AM474392_1(AM474392|pid:none) Vitis vinifera contig VV78X162630.... 52 4e-05
FN357418_27(FN357418|pid:none) Schistosoma mansoni genome sequen... 52 4e-05
AC004473_23(AC004473|pid:none) Arabidopsis thaliana chromosome 1... 52 4e-05
FB817276_1(FB817276|pid:none) Sequence 36549 from Patent WO20080... 52 4e-05
FN357418_28(FN357418|pid:none) Schistosoma mansoni genome sequen... 52 4e-05
BC017100_1(BC017100|pid:none) Homo sapiens ring finger protein 1... 52 4e-05
AL590444_60(AL590444|pid:none) chromosome IV of strain GB-M1 of ... 52 4e-05
BT010726_1(BT010726|pid:none) Arabidopsis thaliana At3g13430 mRN... 52 4e-05
(Q86XS8) RecName: Full=Goliath homolog; AltName: Full=RING finge... 52 4e-05
AF063866_205(AF063866|pid:none) Melanoplus sanguinipes entomopox... 52 6e-05
(Q3U2C5) RecName: Full=E3 ubiquitin-protein ligase RNF149; ... 52 6e-05
AY069375_1(AY069375|pid:none) Drosophila melanogaster LD08152 fu... 52 6e-05
(P0C034) RecName: Full=RING-H2 finger protein ATL1K; AltName: Fu... 52 6e-05
AC016041_2(AC016041|pid:none) Genomic sequence for Arabidopsis t... 52 6e-05
AC008263_27(AC008263|pid:none) Arabidopsis thaliana chromosome 1... 52 6e-05
EU953643_1(EU953643|pid:none) Zea mays clone 1442113 RING-H2 fin... 52 6e-05
AM462015_2(AM462015|pid:none) Vitis vinifera contig VV78X029871.... 52 6e-05
AK065316_1(AK065316|pid:none) Oryza sativa Japonica Group cDNA c... 52 6e-05
AK226665_1(AK226665|pid:none) Arabidopsis thaliana mRNA for hypo... 52 6e-05
EF148378_1(EF148378|pid:none) Populus trichocarpa x Populus delt... 52 6e-05
AC009177_16(AC009177|pid:none) Arabidopsis thaliana chromosome I... 52 6e-05
AB026262_1(AB026262|pid:none) Cicer arietinum mRNA for ring fing... 52 6e-05
AK227950_1(AK227950|pid:none) Arabidopsis thaliana mRNA for RING... 52 6e-05
AK155360_1(AK155360|pid:none) Mus musculus NOD-derived CD11c +ve... 52 6e-05
EF147124_1(EF147124|pid:none) Populus trichocarpa clone WS01227_... 52 6e-05
AC079674_7(AC079674|pid:none) Arabidopsis thaliana chromosome 1 ... 52 6e-05
AC084022_27(AC084022|pid:none) Oryza sativa chromosome 3 BAC OSJ... 52 6e-05
A86323(A86323) protein F14D16.3 [imported] - Arabidopsis thalian... 52 6e-05
(Q2TA44) RecName: Full=RING finger protein 148; Flags: Precursor... 51 7e-05
AC126786_7(AC126786|pid:none) Medicago truncatula clone mth2-8c2... 51 7e-05
AK229589_1(AK229589|pid:none) Arabidopsis thaliana mRNA for hypo... 51 7e-05
CP001577_484(CP001577|pid:none) Micromonas sp. RCC299 chromosome... 51 7e-05
(Q6NQG7) RecName: Full=RING-H2 finger protein ATL1L; &AK176235_... 51 7e-05
AM453292_2(AM453292|pid:none) Vitis vinifera contig VV78X262046.... 51 7e-05
BT020274_1(BT020274|pid:none) Arabidopsis thaliana At4g28370 mRN... 51 7e-05
(Q8W571) RecName: Full=RING-H2 finger protein ATL4O; Flags: Prec... 51 7e-05
(Q566M8) RecName: Full=RING finger protein 150; Flags: Precursor... 51 9e-05
AM450723_2(AM450723|pid:none) Vitis vinifera contig VV78X016220.... 51 9e-05
BT053897_1(BT053897|pid:none) Zea mays full-length cDNA clone ZM... 51 9e-05
AC150205_10(AC150205|pid:none) Medicago truncatula clone mth2-72... 51 9e-05
F84591(F84591)hypothetical protein At2g20650 [imported] - Arabid... 51 9e-05
(Q8NC42) RecName: Full=E3 ubiquitin-protein ligase RNF149; ... 51 9e-05
AP008213_1054(AP008213|pid:none) Oryza sativa (japonica cultivar... 51 9e-05
AC135462_20(AC135462|pid:none) Medicago truncatula clone mth2-35... 51 9e-05
AF195045_1(AF195045|pid:none) Rattus norvegicus TRC8 gene, parti... 51 9e-05
(Q9FKX5) RecName: Full=RING-H2 finger protein ATL5P; &AB011474_... 51 9e-05
AM453212_1(AM453212|pid:none) Vitis vinifera contig VV78X031497.... 51 9e-05
AC013722_2(AC013722|pid:none) Homo sapiens BAC clone RP11-299H21... 51 9e-05
AB463234_1(AB463234|pid:none) Synthetic construct DNA, clone: pF... 51 9e-05
AB026654_14(AB026654|pid:none) Arabidopsis thaliana genomic DNA,... 51 9e-05
BT062731_1(BT062731|pid:none) Zea mays full-length cDNA clone ZM... 51 9e-05
(Q9FLC6) RecName: Full=RING-H2 finger protein ATL5B; Flags: Prec... 51 9e-05
AL391144_20(AL391144|pid:none) Arabidopsis thaliana DNA chromoso... 51 9e-05
CP001330_186(CP001330|pid:none) Micromonas sp. RCC299 chromosome... 51 9e-05
AY533211_1(AY533211|pid:none) Chinchilla lanigera goliath protei... 51 9e-05
AP008207_648(AP008207|pid:none) Oryza sativa (japonica cultivar-... 50 1e-04
AC011765_28(AC011765|pid:none) Arabidopsis thaliana chromosome 1... 50 1e-04
AC144737_8(AC144737|pid:none) Oryza sativa (japonica cultivar-gr... 50 1e-04
BT034377_1(BT034377|pid:none) Zea mays full-length cDNA clone ZM... 50 1e-04
AP005399_9(AP005399|pid:none) Oryza sativa Japonica Group genomi... 50 1e-04
EF145460_1(EF145460|pid:none) Populus trichocarpa clone WS01125_... 50 1e-04
AP003857_3(AP003857|pid:none) Oryza sativa Japonica Group genomi... 50 1e-04
AK068144_1(AK068144|pid:none) Oryza sativa Japonica Group cDNA c... 50 1e-04
EU965619_1(EU965619|pid:none) Zea mays clone 287487 RING-H2 fing... 50 1e-04
AP008212_1606(AP008212|pid:none) Oryza sativa (japonica cultivar... 50 1e-04
CP000584_496(CP000584|pid:none) Ostreococcus lucimarinus CCE9901... 50 2e-04
FN313965_1(FN313965|pid:none) Schistosoma japonicum isolate Anhu... 50 2e-04
AL022223_17(AL022223|pid:none) Arabidopsis thaliana DNA chromoso... 50 2e-04
AY086760_1(AY086760|pid:none) Arabidopsis thaliana clone 27464 m... 50 2e-04
AK109943_1(AK109943|pid:none) Oryza sativa Japonica Group cDNA c... 50 2e-04
(Q9FIR0) RecName: Full=Putative RING-H2 finger protein ATL5L; &... 50 2e-04
DQ837165_70(DQ837165|pid:none) Ecotropis obliqua NPV strain A1, ... 50 2e-04
AL080318_5(AL080318|pid:none) Arabidopsis thaliana DNA chromosom... 50 2e-04
AB009049_7(AB009049|pid:none) Arabidopsis thaliana genomic DNA, ... 50 2e-04
T04483(T04483) probable ring finger protein - barley &Y14573_3(... 50 2e-04
BT062506_1(BT062506|pid:none) Zea mays full-length cDNA clone ZM... 50 2e-04
AY813144_1(AY813144|pid:none) Schistosoma japonicum SJCHGC05585 ... 50 2e-04
EU967492_1(EU967492|pid:none) Zea mays clone 303679 RING-H2 fing... 50 2e-04
AM502227_32(AM502227|pid:none) Leishmania infantum chromosome 9. 50 2e-04
AC135594_35(AC135594|pid:none) Oryza sativa chromosome 3 BAC OSJ... 50 2e-04
EU954398_1(EU954398|pid:none) Zea mays clone 1465572 protein bin... 50 2e-04
AP004687_9(AP004687|pid:none) Oryza sativa Japonica Group genomi... 50 2e-04
EU968561_1(EU968561|pid:none) Zea mays clone 322302 protein bind... 50 2e-04
BC135901_1(BC135901|pid:none) Xenopus tropicalis hypothetical pr... 50 2e-04
BC154845_1(BC154845|pid:none) Xenopus tropicalis hypothetical pr... 50 2e-04
CP000592_92(CP000592|pid:none) Ostreococcus lucimarinus CCE9901 ... 50 2e-04
CP000591_37(CP000591|pid:none) Ostreococcus lucimarinus CCE9901 ... 50 2e-04
BC088816_1(BC088816|pid:none) Xenopus tropicalis ring finger and... 50 2e-04
EU963676_1(EU963676|pid:none) Zea mays clone 265678 RHC1A mRNA, ... 50 2e-04
BT042809_1(BT042809|pid:none) Zea mays full-length cDNA clone ZM... 50 2e-04
BT037831_1(BT037831|pid:none) Zea mays full-length cDNA clone ZM... 50 2e-04
AY227652_1(AY227652|pid:none) Homo sapiens clone ICRFp512H14173Q... 49 3e-04
AC016041_3(AC016041|pid:none) Genomic sequence for Arabidopsis t... 49 3e-04
CQ834632_1(CQ834632|pid:none) Sequence 503 from Patent WO2004058... 49 3e-04
(Q9LSW9) RecName: Full=RING-H2 finger protein ATL5K; AltName: Fu... 49 3e-04
CR548612_120(CR548612|pid:none) Paramecium tetraurelia macronucl... 49 3e-04
(Q8IWI0) RecName: Full=E3 ubiquitin-protein ligase DZIP3; ... 49 3e-04
AC129717_4(AC129717|pid:none) Oryza sativa (japonica cultivar-gr... 49 3e-04
EU958173_1(EU958173|pid:none) Zea mays clone 1676691 unknown mRNA. 49 3e-04
AB026654_15(AB026654|pid:none) Arabidopsis thaliana genomic DNA,... 49 3e-04
AE014297_3602(AE014297|pid:none) Drosophila melanogaster chromos... 49 3e-04
(Q6NML0) RecName: Full=RING-H2 finger protein ATL1J; &BT010932_... 49 3e-04
AK294967_1(AK294967|pid:none) Homo sapiens cDNA FLJ57977 complet... 49 3e-04
CR954211_41(CR954211|pid:none) Ostreococcus tauri strain OTTH059... 49 3e-04
AB014575_1(AB014575|pid:none) Homo sapiens mRNA for KIAA0675 pro... 49 3e-04
CU928171_518(CU928171|pid:none) Kluyveromyces thermotolerans str... 49 3e-04
AC137546_2(AC137546|pid:none) Medicago truncatula clone mth2-24g... 49 3e-04
AM494946_34(AM494946|pid:none) Leishmania braziliensis chromosom... 49 3e-04
AY052711_1(AY052711|pid:none) Arabidopsis thaliana AT5g59550/f2o... 49 3e-04
EF083241_1(EF083241|pid:none) Picea sitchensis clone WS02810_F06... 49 3e-04
FB746686_1(FB746686|pid:none) Sequence 153 from Patent EP1903111. 49 3e-04
AY224508_1(AY224508|pid:none) Oryza sativa (japonica cultivar-gr... 49 3e-04
AY118341_1(AY118341|pid:none) Drosophila melanogaster LD44641 fu... 49 3e-04
BT015124_1(BT015124|pid:none) Arabidopsis thaliana At1g51930 mRN... 49 3e-04
AY495710_1(AY495710|pid:none) Homo sapiens UURF2 ubiquitin ligas... 49 3e-04
AM454201_1(AM454201|pid:none) Vitis vinifera contig VV79X002445.... 49 3e-04
AP008208_855(AP008208|pid:none) Oryza sativa (japonica cultivar-... 49 3e-04
BT037563_1(BT037563|pid:none) Zea mays full-length cDNA clone ZM... 49 4e-04
AC079022_20(AC079022|pid:none) Oryza sativa chromosome 5 clone P... 49 4e-04
AP008211_65(AP008211|pid:none) Oryza sativa (japonica cultivar-g... 49 4e-04
(Q8LGA5) RecName: Full=RING-H2 finger protein ATL5H; Flags: Prec... 49 4e-04
AC079356_2(AC079356|pid:none) Oryza sativa (japonica cultivar-gr... 49 4e-04
FM992691_31(FM992691|pid:none) Candida dubliniensis CD36 chromos... 49 4e-04
AP003339_11(AP003339|pid:none) Oryza sativa Japonica Group genom... 49 4e-04
CR382125_173(CR382125|pid:none) Kluyveromyces lactis strain NRRL... 49 4e-04
AK341832_1(AK341832|pid:none) Acyrthosiphon pisum ACYPI000911 mR... 49 4e-04
BC160840_1(BC160840|pid:none) Rattus norvegicus ring finger prot... 49 4e-04
AL662946_9(AL662946|pid:none) Oryza sativa genomic DNA, chromoso... 49 4e-04
AM459489_5(AM459489|pid:none) Vitis vinifera contig VV78X107241.... 49 4e-04
BC167061_1(BC167061|pid:none) Rattus norvegicus ring finger prot... 49 4e-04
BC095880_1(BC095880|pid:none) Danio rerio zgc:113271, mRNA (cDNA... 49 4e-04
AY084377_1(AY084377|pid:none) Arabidopsis thaliana clone 106078 ... 49 4e-04
AB006707_12(AB006707|pid:none) Arabidopsis thaliana genomic DNA,... 49 4e-04
AE013599_2806(AE013599|pid:none) Drosophila melanogaster chromos... 49 5e-04
BT037505_1(BT037505|pid:none) Zea mays full-length cDNA clone ZM... 49 5e-04
AK105338_1(AK105338|pid:none) Oryza sativa Japonica Group cDNA c... 49 5e-04
AP003251_4(AP003251|pid:none) Oryza sativa Japonica Group genomi... 49 5e-04
AP004777_17(AP004777|pid:none) Oryza sativa Japonica Group genom... 49 5e-04
(Q8TEB7) RecName: Full=E3 ubiquitin-protein ligase RNF128; ... 49 5e-04
BT039305_1(BT039305|pid:none) Zea mays full-length cDNA clone ZM... 49 5e-04
AL691424_3(AL691424|pid:none) Mouse DNA sequence from clone RP23... 49 5e-04
AC135606_14(AC135606|pid:none) Medicago truncatula clone mth2-10... 49 5e-04
AC084296_17(AC084296|pid:none) Oryza sativa chromosome 3 BAC OSJ... 49 5e-04
BT066953_1(BT066953|pid:none) Zea mays full-length cDNA clone ZM... 49 5e-04
AK004847_1(AK004847|pid:none) Mus musculus adult male liver cDNA... 49 5e-04
EU952589_1(EU952589|pid:none) Zea mays clone 1283870 RING-H2 fin... 49 5e-04
EU959054_1(EU959054|pid:none) Zea mays clone 209794 RING-H2 fing... 49 5e-04
AK126553_1(AK126553|pid:none) Homo sapiens cDNA FLJ44589 fis, cl... 49 5e-04
BT066034_1(BT066034|pid:none) Zea mays full-length cDNA clone ZM... 49 5e-04
AB041548_1(AB041548|pid:none) Mus musculus brain cDNA, clone MNC... 49 5e-04
AP003104_9(AP003104|pid:none) Oryza sativa Japonica Group genomi... 49 5e-04
BC056677_1(BC056677|pid:none) Homo sapiens ring finger protein 1... 49 5e-04
EU961756_1(EU961756|pid:none) Zea mays clone 238102 unknown mRNA. 49 5e-04
EU959574_1(EU959574|pid:none) Zea mays clone 218670 unknown mRNA. 49 5e-04
AJ720511_1(AJ720511|pid:none) Gallus gallus mRNA for hypothetica... 49 5e-04
AK146266_1(AK146266|pid:none) Mus musculus TIB-55 BB88 cDNA, RIK... 49 5e-04
CR382133_497(CR382133|pid:none) Debaryomyces hansenii strain CBS... 49 5e-04
FN392322_149(FN392322|pid:none) Pichia pastoris GS115 chromosome... 49 5e-04
AF394689_1(AF394689|pid:none) Homo sapiens GRAIL (GRAIL) mRNA, c... 49 5e-04
CR954206_431(CR954206|pid:none) Ostreococcus tauri strain OTTH05... 49 5e-04
EU960124_1(EU960124|pid:none) Zea mays clone 222001 RING finger ... 49 5e-04
(Q8GT75) RecName: Full=RING-H2 finger protein ATL4M; AltName: Fu... 49 5e-04
CU633438_357(CU633438|pid:none) Podospora anserina genomic DNA c... 49 5e-04
AP003348_15(AP003348|pid:none) Oryza sativa Japonica Group genom... 49 5e-04
BT070541_1(BT070541|pid:none) Picea sitchensis clone WS02735_E01... 49 5e-04
BT071558_1(BT071558|pid:none) Picea sitchensis clone WS02924_J14... 49 5e-04
(Q9D304) RecName: Full=E3 ubiquitin-protein ligase RNF128; ... 49 5e-04
BC068671_1(BC068671|pid:none) Xenopus laevis hypothetical protei... 48 6e-04
CR940352_90(CR940352|pid:none) Theileria annulata strain Ankara ... 48 6e-04
AC126787_18(AC126787|pid:none) Medicago truncatula clone mth2-11... 48 6e-04
AY094471_1(AY094471|pid:none) Arabidopsis thaliana AT3g18290/MIE... 48 6e-04
CR954218_118(CR954218|pid:none) Ostreococcus tauri strain OTTH05... 48 6e-04
(Q29RU0) RecName: Full=E3 ubiquitin-protein ligase RNF128; ... 48 6e-04
G84530(G84530)probable RING-H2 zinc finger protein [imported] - ... 48 6e-04
(Q0VD51) RecName: Full=RING finger protein 13; &BC119833_1(BC11... 48 6e-04
BT034774_1(BT034774|pid:none) Zea mays full-length cDNA clone ZM... 48 6e-04
BT035056_1(BT035056|pid:none) Zea mays full-length cDNA clone ZM... 48 6e-04
AP000414_8(AP000414|pid:none) Arabidopsis thaliana genomic DNA, ... 48 6e-04
AK175589_1(AK175589|pid:none) Arabidopsis thaliana mRNA for RING... 48 6e-04
AK059108_1(AK059108|pid:none) Oryza sativa Japonica Group cDNA c... 48 6e-04
EU971935_1(EU971935|pid:none) Zea mays clone 372563 unknown mRNA. 48 6e-04
CP000590_239(CP000590|pid:none) Ostreococcus lucimarinus CCE9901... 48 6e-04
AK090771_1(AK090771|pid:none) Homo sapiens cDNA FLJ33452 fis, cl... 48 6e-04
(O43567) RecName: Full=RING finger protein 13; &(Q5RCV8) RecNam... 48 6e-04
BT087021_1(BT087021|pid:none) Zea mays full-length cDNA clone ZM... 48 6e-04
AK230391_1(AK230391|pid:none) Arabidopsis thaliana mRNA for puta... 48 6e-04
(Q9ZT50) RecName: Full=RING-H2 zinc finger protein RHA2a; &AC00... 48 6e-04
EU954860_1(EU954860|pid:none) Zea mays clone 1488123 protein bin... 48 8e-04
CU638743_227(CU638743|pid:none) Podospora anserina genomic DNA c... 48 8e-04
AM270413_13(AM270413|pid:none) Aspergillus niger contig An18c021... 48 8e-04
AM485058_5(AM485058|pid:none) Vitis vinifera contig VV78X234046.... 48 8e-04
AK317090_1(AK317090|pid:none) Arabidopsis thaliana AT5G10650 mRN... 48 8e-04
CU928171_760(CU928171|pid:none) Kluyveromyces thermotolerans str... 48 8e-04
CP000597_111(CP000597|pid:none) Ostreococcus lucimarinus CCE9901... 48 8e-04
BT064086_1(BT064086|pid:none) Zea mays full-length cDNA clone ZM... 48 8e-04
AC145811_17(AC145811|pid:none) Oryza sativa (japonica cultivar-g... 48 8e-04
CR382126_526(CR382126|pid:none) Kluyveromyces lactis strain NRRL... 48 8e-04
AC005496_5(AC005496|pid:none) Arabidopsis thaliana chromosome 2 ... 48 8e-04
(Q9LM69) RecName: Full=RING-H2 finger protein ATL1B; &AC069251_... 48 8e-04
AC137928_16(AC137928|pid:none) Oryza sativa (japonica cultivar-g... 48 8e-04
(Q9SJJ7) RecName: Full=RING-H2 finger protein ATL2E; &AC006929_... 48 8e-04
DQ415921_17(DQ415921|pid:none) Cleome spinosa clone BAC Cs2, com... 48 8e-04
AY099680_1(AY099680|pid:none) Arabidopsis thaliana Pspzf zinc fi... 48 8e-04
FN357583_23(FN357583|pid:none) Schistosoma mansoni genome sequen... 48 8e-04
EU971772_1(EU971772|pid:none) Zea mays clone 370380 unknown mRNA. 48 8e-04
EF084737_1(EF084737|pid:none) Picea sitchensis clone WS02729_F02... 48 8e-04
EF144886_1(EF144886|pid:none) Populus trichocarpa clone WS01119_... 48 8e-04
BT010696_1(BT010696|pid:none) Arabidopsis thaliana At1g68180 mRN... 48 8e-04
(Q90972) RecName: Full=RING finger protein 13; AltName: Full=C-R... 48 8e-04
AL606622_9(AL606622|pid:none) Oryza sativa genomic DNA, chromoso... 48 8e-04
DQ812520_2(DQ812520|pid:none) Spironucleus barkhanus isolate Sp3... 48 8e-04
BT015918_1(BT015918|pid:none) Arabidopsis thaliana At5g10650 gen... 48 8e-04
(Q9C7I1) RecName: Full=Putative RING-H2 finger protein ATL1H; Fl... 48 8e-04
AP003449_4(AP003449|pid:none) Oryza sativa Japonica Group genomi... 47 0.001
AY087766_1(AY087766|pid:none) Arabidopsis thaliana clone 38292 m... 47 0.001
AC105259_13(AC105259|pid:none) Oryza sativa (japonica cultivar-g... 47 0.001
AL031620_5(AL031620|pid:none) Caenorhabditis elegans Cosmid C18B... 47 0.001
EF086501_1(EF086501|pid:none) Picea sitchensis clone WS02749_F11... 47 0.001
(O64763) RecName: Full=RING-H2 finger protein ATL2G; AltName: Fu... 47 0.001
EU351836_1(EU351836|pid:none) Arabidopsis thaliana ecotype El-0 ... 47 0.001
AM440441_1(AM440441|pid:none) Vitis vinifera contig VV78X146533.... 47 0.001
(Q9SN28) RecName: Full=RING-H2 finger protein ATL4E; &AL049487_... 47 0.001
EU963414_1(EU963414|pid:none) Zea mays clone 262031 zinc finger,... 47 0.001
CU928181_200(CU928181|pid:none) Zygosaccharomyces rouxii strain ... 47 0.001
U80836_7(U80836|pid:none) Caenorhabditis elegans cosmid B0432, c... 47 0.001
(Q9M0R6) RecName: Full=Putative RING-H2 finger protein ATL4B; Fl... 47 0.001
AP005511_6(AP005511|pid:none) Oryza sativa Japonica Group genomi... 47 0.001
(Q8N7C7) RecName: Full=RING finger protein 148; Flags: Precursor... 47 0.001
AC123571_13(AC123571|pid:none) Medicago truncatula clone mth1-14... 47 0.001
(Q9P0P0) RecName: Full=RING finger protein 181; &AC016753_5(AC0... 47 0.001
AK118593_1(AK118593|pid:none) Arabidopsis thaliana At2g17730 mRN... 47 0.001
BC134539_1(BC134539|pid:none) Bos taurus ring finger and CHY zin... 47 0.001
AK101391_1(AK101391|pid:none) Oryza sativa Japonica Group cDNA c... 47 0.001
AC135467_5(AC135467|pid:none) Medicago truncatula clone mth2-34h... 47 0.001
CP001160_649(CP001160|pid:none) Thalassiosira pseudonana CCMP133... 47 0.001
AP002066_3(AP002066|pid:none) Arabidopsis thaliana genomic DNA, ... 47 0.001
BT001518_1(BT001518|pid:none) Drosophila melanogaster LP11469 fu... 47 0.001
CP001576_300(CP001576|pid:none) Micromonas sp. RCC299 chromosome... 47 0.001
AM475468_1(AM475468|pid:none) Vitis vinifera contig VV78X075450.... 47 0.001
EU351822_1(EU351822|pid:none) Arabidopsis thaliana ecotype Co-1 ... 47 0.001
AL133314_14(AL133314|pid:none) Arabidopsis thaliana DNA chromoso... 47 0.001
AC091774_10(AC091774|pid:none) Oryza sativa chromosome 6 BAC OJ1... 47 0.001
(Q9ZV53) RecName: Full=Putative RING-H2 finger protein ATL2C; &... 47 0.001
AK060092_1(AK060092|pid:none) Oryza sativa Japonica Group cDNA c... 47 0.001
(P93823) RecName: Full=RING-H2 finger protein ATL1A; &AC000104_... 47 0.001
(Q75DC2) RecName: Full=Alcohol-sensitive RING finger protein 1; ... 47 0.001
AC144514_21(AC144514|pid:none) Medicago truncatula clone mth2-12... 47 0.001
(Q9VE61) RecName: Full=RING finger protein 181 homolog; &AE0142... 47 0.001
EU351827_1(EU351827|pid:none) Arabidopsis thaliana ecotype Sorbo... 47 0.001
EU351811_1(EU351811|pid:none) Arabidopsis thaliana ecotype Col-0... 47 0.001
(Q9FGJ6) RecName: Full=RING-H2 finger protein ATL5M; Flags: Prec... 47 0.001
EF147271_1(EF147271|pid:none) Populus trichocarpa clone WS0122_C... 47 0.001
AM479964_1(AM479964|pid:none) Vitis vinifera contig VV78X057791.... 47 0.001
AM883105_1(AM883105|pid:none) Spinacia oleracea mRNA for NEP1-in... 47 0.001
EU351813_1(EU351813|pid:none) Arabidopsis thaliana ecotype Cvi-0... 47 0.001
AM473803_1(AM473803|pid:none) Vitis vinifera contig VV78X263527.... 47 0.001
EU970997_1(EU970997|pid:none) Zea mays clone 355488 RING-H2 fing... 47 0.001
AP000836_16(AP000836|pid:none) Oryza sativa Japonica Group genom... 47 0.001
(Q8GT74) RecName: Full=RING-H2 finger protein ATL2B; AltName: Fu... 47 0.001
AK118932_1(AK118932|pid:none) Arabidopsis thaliana At4g30370 mRN... 47 0.001
EU351820_1(EU351820|pid:none) Arabidopsis thaliana ecotype Bla-1... 47 0.001
BC159083_1(BC159083|pid:none) Xenopus tropicalis hypothetical pr... 47 0.002
FM992690_230(FM992690|pid:none) Candida dubliniensis CD36 chromo... 47 0.002
AY054498_1(AY054498|pid:none) Arabidopsis thaliana Unknown prote... 47 0.002
AM447686_2(AM447686|pid:none) Vitis vinifera contig VV78X003621.... 47 0.002
AC151824_2(AC151824|pid:none) Medicago truncatula clone mth2-45n... 47 0.002
(Q3T0W3) RecName: Full=RING finger protein 181; &BC102230_1(BC1... 47 0.002
AP004880_11(AP004880|pid:none) Oryza sativa Japonica Group genom... 47 0.002
CR382138_923(CR382138|pid:none) Debaryomyces hansenii strain CBS... 47 0.002
BC017878_1(BC017878|pid:none) Homo sapiens ring finger protein 1... 47 0.002
AP008208_2471(AP008208|pid:none) Oryza sativa (japonica cultivar... 47 0.002
BT045365_1(BT045365|pid:none) Salmo salar clone ssal-rgf-519-156... 47 0.002
EU973873_1(EU973873|pid:none) Zea mays clone 423386 hypothetical... 47 0.002
AC157490_15(AC157490|pid:none) Medicago truncatula clone mth2-12... 47 0.002
AC148237_8(AC148237|pid:none) Medicago truncatula clone mth2-1o1... 47 0.002
AK014094_1(AK014094|pid:none) Mus musculus 13 days embryo head c... 47 0.002
BT068349_1(BT068349|pid:none) Zea mays full-length cDNA clone ZM... 47 0.002
FB844022_1(FB844022|pid:none) Sequence 63295 from Patent WO20080... 47 0.002
AP005511_20(AP005511|pid:none) Oryza sativa Japonica Group genom... 47 0.002
EU967424_1(EU967424|pid:none) Zea mays clone 302753 protein bind... 47 0.002
CP001160_418(CP001160|pid:none) Thalassiosira pseudonana CCMP133... 47 0.002
BT048669_1(BT048669|pid:none) Salmo salar clone ssal-evd-554-047... 47 0.002
AP008208_859(AP008208|pid:none) Oryza sativa (japonica cultivar-... 47 0.002
GM977105_1(GM977105|pid:none) Sequence 13 from Patent WO20081456... 47 0.002
(Q9WTV7) RecName: Full=E3 ubiquitin-protein ligase RNF12; ... 46 0.002
(Q7T037) RecName: Full=E3 ubiquitin-protein ligase rnf12-B; ... 46 0.002
>BC057411_1(BC057411|pid:none) Danio rerio autocrine motility factor
receptor, mRNA (cDNA clone MGC:63893 IMAGE:6789887),
complete cds.
Length = 620
Score = 156 bits (395), Expect = 1e-36
Identities = 69/171 (40%), Positives = 107/171 (62%)
Frame = +3
Query: 42 GLSNLMLLNFECFTIFFETVQTLIKYSIHLFDLSSEDVWDKRGQYIYYTEFSTDSVILAG 221
G+ + + EC + T +I+YSIHL+DL+ E W+ + YIYYT+F + IL+
Sbjct: 205 GMHTVAFMAAECLLVTVRTGHVIIRYSIHLWDLNHEGTWENKSSYIYYTDFIMELAILSL 264
Query: 222 TCAHLIHIIIIQGFTPTLLHVVMFFYFKMVFGNLNRKITAYRNYCKLTSDMDNCYPNVGE 401
H IH+++ ++ +V+F + +F + R+I ++NY ++ +M++ +
Sbjct: 265 DLMHHIHMLLFGNIWLSMASLVIFMQLRHLFHEVQRRIRRHKNYLRVIDNMESRFAVATP 324
Query: 402 KDLENYNDDCAICRDRMVTAKKLPCGHIFHHSCLRAWLEQHHSCPTCRRSL 554
++L NDDCAIC D M TA+KLPCGH+FH+SCLR+WLEQ SCPTCR SL
Sbjct: 325 EELAANNDDCAICWDSMTTARKLPCGHLFHNSCLRSWLEQDTSCPTCRMSL 375
Score = 35.8 bits (81), Expect = 3.1
Identities = 21/68 (30%), Positives = 32/68 (47%)
Frame = +1
Query: 736 PEYSXGIPXTXSRXSLXASQYNNLVYXANYIHGLFENISTQTIQNDLLQTNNVNRTIDNI 915
P +S + T + + + + L A+ I +F + I DL T +V T DNI
Sbjct: 427 PSFSVEVMHTTNILGIAQANNSQLNGMAHQIQEMFPQVPYHLILQDLQLTRSVEVTTDNI 486
Query: 916 LEGRLVEP 939
LEGR+ P
Sbjct: 487 LEGRIQVP 494
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3236559
Number of Hits to DB: 1,351,998,018
Number of extensions: 21137825
Number of successful extensions: 62046
Number of sequences better than 10.0: 2213
Number of HSP's gapped: 61640
Number of HSP's successfully gapped: 2236
Length of query: 402
Length of database: 1,051,180,864
Length adjustment: 131
Effective length of query: 271
Effective length of database: 627,191,635
Effective search space: 169968933085
Effective search space used: 169968933085
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)
|
| PSORT |
|
| VS (DIR, S) |
0 |
| VH (FL, L) |
1 |
| VF (FL, S) |
0 |
| AH (FL, L) |
0 |
| AF (FL, S) |
0 |
| SL (DIR, L) |
0 |
| SS (DIR, S) |
1 |
| SH (FL, L) |
0 |
| SF (FL, S) |
1 |
| CH (FL, L) |
0 |
| CF (FL, S) |
0 |
| FCL (DIR, L) |
0 |
| FC (DIR, S) |
0 |
| FC-IC (SUB) |
0 |