| Contig-U02712-1 |
| Contig ID |
Contig-U02712-1 |
| Contig update |
2002. 9.13 |
| Contig sequence |
 |
| Gap |
no gap |
| Contig length |
1427 |
| Chromosome number (1..6, M) |
6 |
| Chromosome length |
3595308 |
| Start point |
481368 |
| End point |
479939 |
| Strand (PLUS/MINUS) |
MINUS |
| Number of clones |
3 |
| Number of EST |
3 |
| Link to clone list |
U02712 |
| List of clone(s) |
|
| Translated Amino Acid sequence |
|
| Translated Amino Acid sequence (All Frames) |
|
| own update |
2004. 6. 9 |
| Homology vs CSM-cDNA |
|
| dna update |
2009. 5.20 |
| Homology vs DNA |
Query= Contig-U02712-1 (Contig-U02712-1Q) /CSM_Contig/Contig-U02712-1Q.Seq.d
(1427 letters)
Database: ddbj_A
102,105,510 sequences; 101,790,757,118 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value N
(AU061833) Dictyostelium discoideum slug cDNA, clone SLG273. 1110 0.0 1
(C93290) Dictyostelium discoideum slug cDNA, clone SSM530. 436 0.0 3
(BJ343492) Dictyostelium discoideum cDNA clone:dda16c07, 3' ... 391 0.0 3
(AU074940) Dictyostelium discoideum slug cDNA, clone SSM530. 476 e-129 1
(EE262430) D04_D04fm1b8_pDNRf_520550 Myzus persicae, line F0... 46 9e-12 5
(E38060) Novel alpha-galactosidase gene. 64 8e-11 4
(E38059) Novel alpha-galactosidase gene. 64 1e-10 4
(AB025362) Clostridium josui agaA gene for alpha-galactosida... 64 2e-09 4
(CP001348) Clostridium cellulolyticum H10, complete genome. 66 4e-06 1
(EX645396) 256676827 Pea aphid whole body normalized full le... 46 9e-05 3
(FF307202) 279368476 Pea aphid whole body normalized full le... 46 1e-04 3
(EF676204) Picea sitchensis clone WS02719_G07 unknown mRNA. 46 1e-04 3
(BY895674) Cryptomeria japonica cDNA clone: CMFL049_N08, 5'e... 58 0.001 1
(BY890391) Cryptomeria japonica cDNA clone: CMFL035_F01, 5'e... 58 0.001 1
(BY889250) Cryptomeria japonica cDNA clone: CMFL032_C10, 5'e... 58 0.001 1
(BY882194) Cryptomeria japonica cDNA clone: CMFL012_N15, 5'e... 58 0.001 1
(BI507303) BB170032B20B04.5 Bee Brain Normalized/Subtracted ... 44 0.001 2
(BY890609) Cryptomeria japonica cDNA clone: CMFL035_P05, 5'e... 56 0.004 1
(EX352216) GQ03111.B7_G10 GQ031 - Xylem Scrapings (Normalize... 38 0.005 3
(EX442321) GQ04105.B7_E17 GQ041 - Shoot tip - Dormant (Norma... 46 0.006 2
(EX352104) GQ03111.B7_B15 GQ031 - Xylem Scrapings (Normalize... 38 0.006 3
(DV985149) GQ0202.B3_E17 GQ020: Clean ROOTS systems -Diurnal... 46 0.006 2
(DV989990) GQ0223.B7_A22 GQ022: ROOT XYLEM - mature trees Pi... 46 0.006 2
(GE480901) GQ0201.B3.r_I17 GQ020: Clean ROOTS systems -Diurn... 46 0.007 2
(DT632758) EST1147689 Normalized pine embryo library, Lib_D ... 54 0.015 1
(DR687768) EST1077850 Normalized pine embryo library, Lib_D ... 54 0.015 1
(CF390626) RTDR2_20_E02.g1_A021 Loblolly pine roots recoveri... 54 0.015 1
(BX255141) Pinus pinaster xylem EST, clone PP111G01. 54 0.015 1
(FE523757) mat2920444 Radiata pine transition earlywood cDNA... 54 0.015 1
(AW587600) ST60D05 Pine TriplEx shoot tip library Pinus taed... 54 0.015 1
(EX625429) 255433276 Pea aphid whole body normalized full le... 46 0.020 2
(EX347058) GQ03104.B7_C23 GQ031 - Xylem Scrapings (Normalize... 52 0.060 1
(EX346995) GQ03104.B7_A03 GQ031 - Xylem Scrapings (Normalize... 52 0.060 1
(EX345746) GQ03103.B7_H02 GQ031 - Xylem Scrapings (Normalize... 52 0.060 1
(EX345654) GQ03103.B7_D04 GQ031 - Xylem Scrapings (Normalize... 52 0.060 1
(EX345380) GQ03103.B7.1_H02 GQ031 - Xylem Scrapings (Normali... 52 0.060 1
(EX345288) GQ03103.B7.1_D04 GQ031 - Xylem Scrapings (Normali... 52 0.060 1
(EC825477) SME00006196 esmbsro2 Sawyeria marylandensis cDNA,... 40 0.078 2
(EL571773) Physarum05367 Physarum polycephalum starvation st... 44 0.082 2
(DY640234) PU2_plate6_C18 PU2 Prunus persica cDNA similar to... 50 0.24 1
(AU084463) Cryptomeria japonica mRNA, clone:CC1386, 5' end, ... 50 0.24 1
(AU084318) Cryptomeria japonica mRNA, clone:CC1213, 5' end, ... 50 0.24 1
(BY892712) Cryptomeria japonica cDNA clone: CMFL041_J18, 5'e... 50 0.24 1
(BY891932) Cryptomeria japonica cDNA clone: CMFL039_I04, 5'e... 50 0.24 1
(BY886651) Cryptomeria japonica cDNA clone: CMFL025_A05, 5'e... 50 0.24 1
(GE572858) CCHT6582.b1_K13.ab1 CCHT Niger Seed Guizotia abys... 50 0.24 1
(GE566357) CCHT24130.b1_D10.ab1 CCHT Niger Seed Guizotia aby... 50 0.24 1
(GE523140) CCHS10335.b1_N16.ab1 CCHS Espina Barnadesia spino... 50 0.24 1
(EK275220) 1095462273965 Global-Ocean-Sampling_GS-31-01-01-1... 40 0.33 2
(CD450539) USDA-FP_102502 Adult Alate Brown Citrus Aphid Tox... 42 0.51 2
(FK028319) RM_G_01476 hemocytes of freshwater pearl mussel c... 34 0.69 2
(EL414693) CHCL3372.b1_H04.ab1 CHC(LMS) Texas blueweed Helia... 34 0.86 3
(EL421908) CHCM1466.b1_D08.ab1 CHC(LMS) Texas blueweed Helia... 34 0.87 3
(AC012099) Homo sapiens chromosome 14 clone RP11-45G3 contai... 48 0.94 1
(AC106855) Homo sapiens chromosome 18 clone RP11-51G16 map 1... 48 0.94 1
(CU466289) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 48 0.94 1
(AC015612) Homo sapiens clone RP11-45G3, LOW-PASS SEQUENCE S... 48 0.94 1
(EJ110776) 1092343153760 Global-Ocean-Sampling_GS-27-01-01-1... 48 0.94 1
(EE192668) CC-L01_013_C11 Coffea young leaves Coffea canepho... 48 0.94 1
(DV700011) CGN-45945 Seed of Late Development Stage Coffea c... 48 0.94 1
(DV699990) CGN-45920 Seed of Late Development Stage Coffea c... 48 0.94 1
(DV694122) CGN-38505 Seed of Late Development Stage Coffea c... 48 0.94 1
(BE248715) NF010F06DT1F1048 Drought Medicago truncatula cDNA... 48 0.94 1
(GH290475) WS0474.C21_F18 SS-BD-32 Picea sitchensis cDNA clo... 48 0.94 1
(FL993951) CCHY22797.b1 CCHY Panicum virgatum callus (N) Pan... 48 0.94 1
(EX309138) GQ01310.T3_C07 GQ013 - Elongating ROOTS tips - sa... 48 0.94 1
(AW226482) ST82H02 Pine TriplEx shoot tip library Pinus taed... 48 0.94 1
(EA720440) Sequence 99319 from patent US 7365185. 40 2.2 2
(EA690496) Sequence 69375 from patent US 7365185. 32 2.5 6
(DU533316) KMG00339 Paenibacillus polymyxa genomic library P... 44 3.6 2
(BT013622) Lycopersicon esculentum clone 132423F, mRNA seque... 46 3.7 1
(ET780801) CHO_OF599xm19f1.ab1 CHO_OF Nicotiana tabacum geno... 46 3.7 1
(EK164875) 1095458046909 Global-Ocean-Sampling_GS-31-01-01-1... 46 3.7 1
(EJ140073) 1092343642998 Global-Ocean-Sampling_GS-27-01-01-1... 46 3.7 1
(EL595898) He_pwd_0181C06_M13R Heliconius erato pooled wing ... 46 3.7 1
(DV997451) GQ02765.B3_A11 GQ099: Mixed spruce tissues Picea ... 46 3.7 1
(DV986528) GQ0201.B3_I17 GQ020: Clean ROOTS systems -Diurnal... 46 3.7 1
(DR552311) WS03222.C21_N15 WS-MC-N-A-20 Picea glauca cDNA cl... 46 3.7 1
(DR525216) WS02719.B21_G07 SS-IL-A-FL-14 Picea sitchensis cD... 46 3.7 1
(DR485208) WS02817.C21_I04 SS-IB-A-FL-13 Picea sitchensis cD... 46 3.7 1
(DR485107) WS02817.C21_C22 SS-IB-A-FL-13 Picea sitchensis cD... 46 3.7 1
(AM983244) Pinus sylvestris EST, clone 7H02. 46 3.7 1
(CU585082) Theobroma cacao, mRNA sequence (KZ0AAB4YC11FM1). 46 3.7 1
(CU548360) Theobroma cacao, mRNA sequence (KZ0AAS2YH14FM1). 46 3.7 1
(CU518346) Theobroma cacao, mRNA sequence (KZ0ABH15YJ16FM1). 46 3.7 1
(CU512195) Theobroma cacao, mRNA sequence (KZ0ACN3YL20FM1). 46 3.7 1
(CU512121) Theobroma cacao, mRNA sequence (KZ0ACN3YH24FM1). 46 3.7 1
(CU510317) Theobroma cacao, mRNA sequence (KZ0ACM3YA19FM1). 46 3.7 1
(CU508651) Theobroma cacao, mRNA sequence (KZ0ACF3YI23FM1). 46 3.7 1
(CU495782) Theobroma cacao, mRNA sequence (KZ0AAD3YH02FM1). 46 3.7 1
(CU495639) Theobroma cacao, mRNA sequence (KZ0AAD1YG18FM1). 46 3.7 1
(CU475565) Theobroma cacao, mRNA sequence (KZ0AAC9YP20FM1). 46 3.7 1
(CU474912) Theobroma cacao, mRNA sequence (KZ0AAC3YG18FM1). 46 3.7 1
(CU474812) Theobroma cacao, mRNA sequence (KZ0AAC2YG18FM1). 46 3.7 1
(CU474129) Theobroma cacao, mRNA sequence (KZ0AAC10YE11FM1). 46 3.7 1
(CO119284) GR__Eb022B18.r GR__Eb Gossypium raimondii cDNA cl... 46 3.7 1
(CO107986) GR__Eb0039I02.r GR__Eb Gossypium raimondii cDNA c... 46 3.7 1
(CO071448) GR__Ea29J12.r GR__Ea Gossypium raimondii cDNA clo... 46 3.7 1
(BQ697915) NXPV_062_D11_F NXPV (Nsf Xylem Planings wood Vert... 46 3.7 1
(BP878058) Solanum lycopersicum cDNA, clone: FA10CF02, 5' en... 46 3.7 1
(BI931657) EST551546 tomato flower, 8 mm to preanthesis buds... 46 3.7 1
(BG319384) NXPV_027_C10_F NXPV (Nsf Xylem Planings wood Vert... 46 3.7 1
(BG318720) NXPV_016_B04_F NXPV (Nsf Xylem Planings wood Vert... 46 3.7 1
(BG317619) NXPV_003_G12_F NXPV (Nsf Xylem Planings wood Vert... 46 3.7 1
(FG397106) 000411KSFA003114HT (KSFA) A. deliciosa small frui... 46 3.7 1
(EY385625) CAXA5791.rev CAXA Helobdella robusta Subtracted L... 46 3.7 1
(EX413718) GQ03616.B7_M04 GQ036 - Shoot tip - Active growth ... 46 3.7 1
(ES852075) UFL_680_81 Cotton fiber 0-10 day post anthesis Go... 46 3.7 1
(ES844509) UFL_111_52 Cotton fiber 0-10 day post anthesis Go... 46 3.7 1
(ES803088) UFL_617_28 Cotton fiber 0-10 day post anthesis Go... 46 3.7 1
(BP189648) Dugesia japonica cDNA, clone: 06728_HH, expressed... 32 4.1 3
(EL422619) CHCM2195.b1_E22.ab1 CHC(LMS) Texas blueweed Helia... 36 4.4 2
(AF465308) Dictyostelium discoideum ABC transporter ABCA.6 (... 40 6.8 3
(AL671090) Mouse DNA sequence from clone RP23-154A10 on chro... 34 6.8 2
(AP001652) Homo sapiens genomic DNA, chromosome 11q, clone:R... 34 6.9 2
(AC090848) Homo sapiens chromosome 11, clone RP11-780O24, co... 34 6.9 2
(AL590087) Human DNA sequence *** SEQUENCING CANCELLED *** f... 34 6.9 2
(EL574144) Physarum10259 Physarum polycephalum starvation st... 38 9.7 2
>(AU061833) Dictyostelium discoideum slug cDNA, clone SLG273.
Length = 704
Score = 1110 bits (560), Expect = 0.0
Identities = 560/560 (100%)
Strand = Plus / Plus
Query: 145 tggatataaattatcaaatggtttagcattaacaccaccaatgggatttaattattggaa 204
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 145 tggatataaattatcaaatggtttagcattaacaccaccaatgggatttaattattggaa 204
Query: 205 ttttgatggttgtaaaactaatttaattaatgaaacaatgatgatggatactgcatatgc 264
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 ttttgatggttgtaaaactaatttaattaatgaaacaatgatgatggatactgcatatgc 264
Query: 265 aatgtcaacaaatggtatgtcaaaagttggatatgaatatgtaaatttagatgattgttg 324
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 aatgtcaacaaatggtatgtcaaaagttggatatgaatatgtaaatttagatgattgttg 324
Query: 325 gatggcaaaaactagagatgagaatggtaatttaagagctgacccaattagattcccaca 384
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 gatggcaaaaactagagatgagaatggtaatttaagagctgacccaattagattcccaca 384
Query: 385 tggtataaagtatttatcagattatattcattcattaggattgaaatttggaatttatgg 444
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 tggtataaagtatttatcagattatattcattcattaggattgaaatttggaatttatgg 444
Query: 445 tgacattggtagtgaaacttgtcaaggctatcctggaagtgagaattatttagaacaaga 504
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 tgacattggtagtgaaacttgtcaaggctatcctggaagtgagaattatttagaacaaga 504
Query: 505 tgcgaaacaatttgcagaatggggtgttgattttgtgaaaatggatggctgcaatatgca 564
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 tgcgaaacaatttgcagaatggggtgttgattttgtgaaaatggatggctgcaatatgca 564
Query: 565 agtgtcagatatgaaaaaggcatacacagatctgggacagtatttacaaaacacaggcag 624
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 agtgtcagatatgaaaaaggcatacacagatctgggacagtatttacaaaacacaggcag 624
Query: 625 acccatggtgtatagttgtagttggcccacgtatgcatatgtgcagaattataacaatgc 684
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 acccatggtgtatagttgtagttggcccacgtatgcatatgtgcagaattataacaatgc 684
Query: 685 cattcgactacattgaaggg 704
||||||||||||||||||||
Sbjct: 685 cattcgactacattgaaggg 704
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Number of Sequences: 102105510
Number of Hits to DB: 1,371,303,833
Number of extensions: 80615015
Number of successful extensions: 6385366
Number of sequences better than 10.0: 118
Length of query: 1427
Length of database: 101,790,757,118
Length adjustment: 24
Effective length of query: 1403
Effective length of database: 99,340,224,878
Effective search space: 139374335503834
Effective search space used: 139374335503834
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)
|
| protein update |
2009. 7.21 |
| Homology vs Protein |
Query= Contig-U02712-1 (Contig-U02712-1Q) /CSM_Contig/Contig-U02712-1Q.Seq.d
(1427 letters)
Database: nrp_B
3,236,559 sequences; 1,051,180,864 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CP001348_1205(CP001348|pid:none) Clostridium cellulolyticum H10,... 172 4e-77
AB025362_1(AB025362|pid:none) Clostridium josui agaA gene for al... 174 3e-75
BT077336_1(BT077336|pid:none) Lepeophtheirus salmonis Pacific fo... 196 1e-74
BA000030_1480(BA000030|pid:none) Streptomyces avermitilis MA-468... 179 9e-74
CP001348_1561(CP001348|pid:none) Clostridium cellulolyticum H10,... 168 2e-73
AL939104_273(AL939104|pid:none) Streptomyces coelicolor A3(2) co... 174 2e-73
CP000360_1673(CP000360|pid:none) Acidobacteria bacterium Ellin34... 158 1e-72
CP000927_2119(CP000927|pid:none) Caulobacter sp. K31, complete g... 169 4e-70
(P14749) RecName: Full=Alpha-galactosidase; EC=3.2.1.22... 171 5e-70
A12675_1(A12675|pid:none) guar alpha galactosidase cDNA. 171 5e-70
EF085713_1(EF085713|pid:none) Picea sitchensis clone WS0294_N01 ... 167 3e-69
AY085529_1(AY085529|pid:none) Arabidopsis thaliana clone 156141 ... 165 3e-69
AK317201_1(AK317201|pid:none) Arabidopsis thaliana AT5G08370 mRN... 165 3e-69
(Q90744) RecName: Full=Alpha-N-acetylgalactosaminidase; ... 186 2e-68
AY738151_1(AY738151|pid:none) Salvia miltiorrhiza glycosyl hydro... 163 2e-67
AJ877911_1(AJ877911|pid:none) Coffea arabica mRNA for alpha gala... 167 4e-67
AE013599_2386(AE013599|pid:none) Drosophila melanogaster chromos... 177 1e-66
CP000282_1591(CP000282|pid:none) Saccharophagus degradans 2-40, ... 169 1e-66
BA000030_632(BA000030|pid:none) Streptomyces avermitilis MA-4680... 174 6e-66
AJ877912_1(AJ877912|pid:none) Coffea canephora mRNA for alpha-ga... 158 1e-65
T10860(T10860) alpha-galactosidase (EC 3.2.1.22) - kidney bean ... 163 2e-65
BC106337_1(BC106337|pid:none) Xenopus laevis hypothetical protei... 187 1e-64
AY074321_1(AY074321|pid:none) Arabidopsis thaliana putative alph... 154 2e-64
AL163763_27(AL163763|pid:none) Arabidopsis thaliana DNA chromoso... 154 2e-64
AY093200_1(AY093200|pid:none) Arabidopsis thaliana alpha-galacto... 165 3e-64
AL392174_11(AL392174|pid:none) Arabidopsis thaliana DNA chromoso... 165 4e-64
(Q9FXT4) RecName: Full=Alpha-galactosidase; EC=3.2.1.22... 154 5e-64
AP008216_933(AP008216|pid:none) Oryza sativa (japonica cultivar-... 154 5e-64
AF289080_1(AF289080|pid:none) Lycopersicon esculentum alpha-gala... 164 1e-63
CP001614_3608(CP001614|pid:none) Teredinibacter turnerae T7901, ... 165 4e-63
EU954969_1(EU954969|pid:none) Zea mays clone 1496122 alpha-galac... 160 7e-63
BT033908_1(BT033908|pid:none) Zea mays full-length cDNA clone ZM... 159 1e-62
EU579460_1(EU579460|pid:none) Ovis aries N-acetylgalactosaminida... 163 2e-62
T24018(T24018) hypothetical protein R07B7.11 - Caenorhabditis el... 169 3e-62
BC114813_1(BC114813|pid:none) Bos taurus N-acetylgalactosaminida... 164 8e-62
BC021631_1(BC021631|pid:none) Mus musculus N-acetyl galactosamin... 167 1e-61
(Q9QWR8) RecName: Full=Alpha-N-acetylgalactosaminidase; ... 167 1e-61
EU442573_1(EU442573|pid:none) Sus scrofa N-acetylgalactosaminida... 163 2e-61
CP000685_4908(CP000685|pid:none) Flavobacterium johnsoniae UW101... 166 2e-61
AJ223966_1(AJ223966|pid:none) Mus musculus NAGA gene. 166 3e-61
(Q66H12) RecName: Full=Alpha-N-acetylgalactosaminidase; ... 166 2e-60
AJ630105_1(AJ630105|pid:none) Pisum sativum mRNA for alpha-galac... 161 2e-60
AJ290422_2(AJ290422|pid:none) Fugu rubripes gra2 gene (partial),... 188 3e-60
BC154863_1(BC154863|pid:none) Xenopus tropicalis N-acetylgalacto... 167 3e-60
BT082350_1(BT082350|pid:none) Anoplopoma fimbria clone afim-evh-... 167 4e-60
DQ311273_1(DQ311273|pid:none) Bombyx mori alpha-N-acetylgalactos... 177 4e-60
AC153004_15(AC153004|pid:none) Medicago truncatula clone mth2-10... 161 9e-60
AB018691_1(AB018691|pid:none) Mortierella vinacea mRNA for alpha... 156 1e-59
AL392174_10(AL392174|pid:none) Arabidopsis thaliana DNA chromoso... 141 1e-59
CP000875_3874(CP000875|pid:none) Herpetosiphon aurantiacus ATCC ... 152 1e-58
(P06280) RecName: Full=Alpha-galactosidase A; EC=3.2.1.... 177 2e-58
AX840234_1(AX840234|pid:none) Sequence 8 from Patent WO03073839. 177 2e-58
AY892090_1(AY892090|pid:none) Synthetic construct Homo sapiens c... 177 2e-58
AY253299_1(AY253299|pid:none) Carica papaya alpha-galactosidase ... 153 3e-58
BT033680_1(BT033680|pid:none) Zea mays full-length cDNA clone ZM... 144 3e-57
AC023240_4(AC023240|pid:none) Oryza sativa chromosome 10 BAC OSJ... 164 3e-57
AK040081_1(AK040081|pid:none) Mus musculus 0 day neonate thymus ... 172 4e-57
CP000473_690(CP000473|pid:none) Solibacter usitatus Ellin6076, c... 133 6e-57
AM420293_3062(AM420293|pid:none) Saccharopolyspora erythraea NRR... 148 1e-56
AK166204_1(AK166204|pid:none) Mus musculus mammary gland RCB-052... 172 2e-56
AK145148_1(AK145148|pid:none) Mus musculus mammary gland RCB-052... 172 2e-56
AM429836_1(AM429836|pid:none) Vitis vinifera contig VV78X092589.... 147 9e-56
CP001472_48(CP001472|pid:none) Acidobacterium capsulatum ATCC 51... 117 1e-54
AY374437_1(AY374437|pid:none) Petunia x hybrida alpha-galactosid... 143 5e-54
FN314309_1(FN314309|pid:none) Schistosoma japonicum isolate Anhu... 175 5e-53
AY526725_4(AY526725|pid:none) Cellvibrio mixtus Unk1 (unk1), Unk... 155 2e-51
CR626927_4081(CR626927|pid:none) Bacteroides fragilis NCTC 9343,... 147 4e-51
AP008213_881(AP008213|pid:none) Oryza sativa (japonica cultivar-... 117 5e-50
FN359186_2(FN359186|pid:none) Schistosoma mansoni genome sequenc... 165 1e-49
CR626927_1347(CR626927|pid:none) Bacteroides fragilis NCTC 9343,... 157 1e-49
AP006841_1487(AP006841|pid:none) Bacteroides fragilis YCH46 DNA,... 157 1e-49
AE015928_3064(AE015928|pid:none) Bacteroides thetaiotaomicron VP... 152 2e-48
BT045564_1(BT045564|pid:none) Salmo salar clone ssal-rgf-524-383... 173 2e-48
BC108078_1(BC108078|pid:none) Danio rerio zgc:123333, mRNA (cDNA... 178 2e-45
AP005737_4(AP005737|pid:none) Oryza sativa Japonica Group genomi... 100 4e-45
(Q9URZ0) RecName: Full=Probable alpha-galactosidase; EC... 139 2e-43
BA000030_2193(BA000030|pid:none) Streptomyces avermitilis MA-468... 108 4e-43
FN314308_1(FN314308|pid:none) Schistosoma japonicum isolate Anhu... 175 5e-43
CT573213_3923(CT573213|pid:none) Frankia alni str. ACN14A chromo... 137 8e-42
CP001504_1906(CP001504|pid:none) Burkholderia glumae BGR1 chromo... 97 1e-39
AP008216_929(AP008216|pid:none) Oryza sativa (japonica cultivar-... 164 6e-39
FJ515678_1(FJ515678|pid:none) Rimicaris exoculata alpha-galactos... 164 6e-39
(Q03647) RecName: Full=Alpha-galactosidase; EC=3.2.1.22... 135 7e-38
(P41947) RecName: Full=Alpha-galactosidase 6; EC=3.2.1.... 129 7e-38
AF246263_1(AF246263|pid:none) Phanerochaete chrysosporium alpha-... 160 1e-37
AM270108_9(AM270108|pid:none) Aspergillus niger contig An06c0020... 158 4e-37
AF412041_1(AF412041|pid:none) Saccharomyces cerevisiae alpha-gal... 132 5e-37
AF246262_1(AF246262|pid:none) Phanerochaete chrysosporium alpha-... 158 5e-37
AE015928_4155(AE015928|pid:none) Bacteroides thetaiotaomicron VP... 104 1e-36
FN357709_1(FN357709|pid:none) Schistosoma mansoni genome sequenc... 157 1e-36
(Q09187) RecName: Full=Alpha-galactosidase; EC=3.2.1.22... 130 2e-36
(P41945) RecName: Full=Alpha-galactosidase 2; EC=3.2.1.... 128 3e-36
AE015928_3590(AE015928|pid:none) Bacteroides thetaiotaomicron VP... 101 4e-36
AK297148_1(AK297148|pid:none) Homo sapiens cDNA FLJ56739 complet... 155 4e-36
AP007157_136(AP007157|pid:none) Aspergillus oryzae RIB40 genomic... 101 1e-35
(Q9UVD6) RecName: Full=Alpha-galactosidase; EC=3.2.1.22... 124 5e-35
EF676204_1(EF676204|pid:none) Picea sitchensis clone WS02719_G07... 151 6e-35
AY809866_1(AY809866|pid:none) Schistosoma japonicum SJCHGC02982 ... 149 2e-34
BA000030_1082(BA000030|pid:none) Streptomyces avermitilis MA-468... 82 7e-34
CP000139_618(CP000139|pid:none) Bacteroides vulgatus ATCC 8482, ... 108 2e-33
Z99716_17(Z99716|pid:none) Human DNA sequence from clone CTA-250... 75 3e-33
AB183020_1(AB183020|pid:none) Saccharomyces kluyveri MELk gene f... 110 1e-32
AB183019_1(AB183019|pid:none) Saccharomyces kluyveri MELk gene f... 110 2e-32
AF251064_1(AF251064|pid:none) Oryza sativa alpha-galactosidase m... 116 2e-32
(Q99172) RecName: Full=Alpha-galactosidase; EC=3.2.1.22... 142 3e-32
AY809794_1(AY809794|pid:none) Schistosoma japonicum SJCHGC03011 ... 140 1e-31
Z99716_16(Z99716|pid:none) Human DNA sequence from clone CTA-250... 75 2e-30
AB475106_1(AB475106|pid:none) Fusarium oxysporum Foap2 mRNA for ... 99 3e-30
AB257564_1(AB257564|pid:none) Lachancea thermotolerans MELth2 ge... 134 1e-29
AB257563_1(AB257563|pid:none) Lachancea thermotolerans MELth1 ge... 134 1e-29
(Q11129) RecName: Full=Alpha-galactosidase; EC=3.2.1.22... 130 9e-29
CP001071_1165(CP001071|pid:none) Akkermansia muciniphila ATCC BA... 78 8e-28
EU961965_1(EU961965|pid:none) Zea mays clone 239357 unknown mRNA. 97 3e-27
Y18586_1(Y18586|pid:none) Aspergillus niger aglB gene. 124 6e-27
FN357709_3(FN357709|pid:none) Schistosoma mansoni genome sequenc... 98 7e-27
FJ843023_1(FJ843023|pid:none) Aspergillus fumigatus strain IMI 3... 123 2e-26
AJ009956_1(AJ009956|pid:none) Penicillium simplicissimum mRNA fo... 122 2e-26
AM270241_24(AM270241|pid:none) Aspergillus niger contig An11c024... 122 3e-26
AB037976_1(AB037976|pid:none) Acremonium sp. No.413 nagA mRNA fo... 120 2e-25
AP007155_1128(AP007155|pid:none) Aspergillus oryzae RIB40 genomi... 120 2e-25
AB037406_1(AB037406|pid:none) Saccharomyces kluyveri MELk1 gene ... 86 2e-25
AB037408_1(AB037408|pid:none) Saccharomyces kluyveri MELk3 gene ... 86 3e-25
CU633870_40(CU633870|pid:none) Podospora anserina genomic DNA ch... 118 6e-25
EU106878_1(EU106878|pid:none) Talaromyces emersonii alpha-galact... 117 1e-24
AE015924_75(AE015924|pid:none) Porphyromonas gingivalis W83, com... 114 1e-23
AP009380_2031(AP009380|pid:none) Porphyromonas gingivalis ATCC 3... 114 1e-23
AP006841_271(AP006841|pid:none) Bacteroides fragilis YCH46 DNA, ... 106 8e-22
AB038520_1(AB038520|pid:none) Saccharomyces kluyveri MELk4 gene ... 107 1e-21
CP000360_3245(CP000360|pid:none) Acidobacteria bacterium Ellin34... 74 8e-21
CP001472_1509(CP001472|pid:none) Acidobacterium capsulatum ATCC ... 73 4e-20
FN367837_1(FN367837|pid:none) Schistosoma mansoni genome sequenc... 102 4e-20
BX004852_6(BX004852|pid:none) Mouse DNA sequence from clone RP23... 100 2e-19
AB475107_1(AB475107|pid:none) Fusarium oxysporum Foap1 mRNA for ... 69 4e-19
AE015928_65(AE015928|pid:none) Bacteroides thetaiotaomicron VPI-... 97 1e-18
CP000927_312(CP000927|pid:none) Caulobacter sp. K31, complete ge... 92 3e-18
AE015928_2662(AE015928|pid:none) Bacteroides thetaiotaomicron VP... 95 7e-18
CP000473_1448(CP000473|pid:none) Solibacter usitatus Ellin6076, ... 62 5e-17
AB037407_1(AB037407|pid:none) Saccharomyces kluyveri MELk2 gene ... 91 1e-16
CP000927_2401(CP000927|pid:none) Caulobacter sp. K31, complete g... 89 3e-16
CP001032_1356(CP001032|pid:none) Opitutus terrae PB90-1, complet... 64 3e-16
EF677985_1(EF677985|pid:none) Picea sitchensis clone WS02815_N10... 83 2e-14
EF678224_1(EF678224|pid:none) Picea sitchensis clone WS0285_J03 ... 68 4e-14
CP001618_53(CP001618|pid:none) Beutenbergia cavernae DSM 12333, ... 47 2e-10
CP000605_1537(CP000605|pid:none) Bifidobacterium longum DJO10A, ... 50 4e-10
T04422(T04422) alpha-galactosidase (EC 3.2.1.22) - barley (fragm... 48 2e-09
AK067743_1(AK067743|pid:none) Oryza sativa Japonica Group cDNA c... 48 2e-08
AC139707_24(AC139707|pid:none) Medicago truncatula clone mth2-16... 47 2e-08
CP000750_3435(CP000750|pid:none) Kineococcus radiotolerans SRS30... 54 1e-05
BT065333_1(BT065333|pid:none) Zea mays full-length cDNA clone ZM... 48 8e-04
CP000473_7287(CP000473|pid:none) Solibacter usitatus Ellin6076, ... 47 0.002
CP001472_65(CP001472|pid:none) Acidobacterium capsulatum ATCC 51... 47 0.002
AY172020_6(AY172020|pid:none) Lactobacillus acidophilus transcri... 47 0.002
CP000885_1913(CP000885|pid:none) Clostridium phytofermentans ISD... 46 0.004
AE017198_264(AE017198|pid:none) Lactobacillus johnsonii NCC 533,... 46 0.004
CP000422_494(CP000422|pid:none) Pediococcus pentosaceus ATCC 257... 45 0.007
CP000423_1965(CP000423|pid:none) Lactobacillus casei ATCC 334, c... 45 0.007
CP000629_1034(CP000629|pid:none) Agrobacterium radiobacter K84 c... 45 0.007
FM177140_2194(FM177140|pid:none) Lactobacillus casei BL23 comple... 45 0.007
AB244722_1(AB244722|pid:none) Sphingobacterium sp. V-54 dex1, hb... 44 0.011
CP001033_2129(CP001033|pid:none) Streptococcus pneumoniae CGSP14... 44 0.015
CP000686_1313(CP000686|pid:none) Roseiflexus sp. RS-1, complete ... 44 0.019
CP000473_916(CP000473|pid:none) Solibacter usitatus Ellin6076, c... 44 0.019
AP009256_1525(AP009256|pid:none) Bifidobacterium adolescentis AT... 43 0.025
AB110787_1(AB110787|pid:none) Arthrobacter globiformis g2d gene ... 43 0.032
(P43469) RecName: Full=Alpha-galactosidase 2; EC=3.2.1.... 43 0.032
BA000030_1087(BA000030|pid:none) Streptomyces avermitilis MA-468... 42 0.055
S74222(S74222;S74220) alpha-galactosidase (EC 3.2.1.22) III prec... 42 0.072
AF230972_1(AF230972|pid:none) Absidia corymbifera alpha-galactos... 41 0.094
DQ234280_1(DQ234280|pid:none) Absidia corymbifera alpha-galactos... 41 0.094
CP000360_664(CP000360|pid:none) Acidobacteria bacterium Ellin345... 41 0.094
CP000885_3022(CP000885|pid:none) Clostridium phytofermentans ISD... 41 0.12
FJ374538_1(FJ374538|pid:none) Secale cereale putative alpha-gala... 40 0.16
CP000804_3473(CP000804|pid:none) Roseiflexus castenholzii DSM 13... 40 0.16
CP000157_703(CP000157|pid:none) Erythrobacter litoralis HTCC2594... 40 0.16
CP000634_612(CP000634|pid:none) Agrobacterium vitis S4 chromosom... 40 0.21
CP000387_399(CP000387|pid:none) Streptococcus sanguinis SK36, co... 40 0.21
FJ374535_1(FJ374535|pid:none) Triticum urartu putative alpha-gal... 39 0.47
CP000407_1551(CP000407|pid:none) Streptococcus suis 05ZYH33, com... 39 0.61
AP008937_1777(AP008937|pid:none) Lactobacillus fermentum IFO 395... 39 0.61
AF038547_4(AF038547|pid:none) Bacillus stearothermophilus beta-1... 39 0.61
CP000408_1565(CP000408|pid:none) Streptococcus suis 98HAH33, com... 39 0.61
AP011115_5568(AP011115|pid:none) Rhodococcus opacus B4 DNA, comp... 38 0.80
AM495102_1(AM495102|pid:none) Thermobia domestica partial mRNA f... 38 0.80
AM711867_329(AM711867|pid:none) Clavibacter michiganensis subsp.... 38 0.80
BA000023_2725(BA000023|pid:none) Sulfolobus tokodaii str. 7 DNA,... 37 1.4
CP000923_1068(CP000923|pid:none) Thermoanaerobacter sp. X514, co... 37 1.4
CP000924_601(CP000924|pid:none) Thermoanaerobacter pseudethanoli... 37 1.4
AE016827_1227(AE016827|pid:none) Mannheimia succiniciproducens M... 37 1.4
Y08557_1(Y08557|pid:none) Thermoanaerobacter ethanolicus melA ge... 37 1.8
CP001071_841(CP001071|pid:none) Akkermansia muciniphila ATCC BAA... 34 2.3
DQ267828_1(DQ267828|pid:none) Bifidobacterium breve strain 203 a... 37 2.3
CP000414_818(CP000414|pid:none) Leuconostoc mesenteroides subsp.... 37 2.3
CP001011_1464(CP001011|pid:none) Xylella fastidiosa M23, complet... 36 3.0
CP000423_965(CP000423|pid:none) Lactobacillus casei ATCC 334, co... 36 3.0
CP001393_434(CP001393|pid:none) Anaerocellum thermophilum DSM 67... 36 3.9
CP001107_3302(CP001107|pid:none) Eubacterium rectale ATCC 33656,... 36 3.9
AE009442_1366(AE009442|pid:none) Xylella fastidiosa Temecula1, c... 36 3.9
CP000557_2053(CP000557|pid:none) Geobacillus thermodenitrificans... 36 3.9
AE015928_1871(AE015928|pid:none) Bacteroides thetaiotaomicron VP... 36 3.9
AB089353_1(AB089353|pid:none) Clostridium stercorarium aga36A ge... 36 3.9
CP001146_1490(CP001146|pid:none) Dictyoglomus thermophilum H-6-1... 35 5.2
CP000647_4158(CP000647|pid:none) Klebsiella pneumoniae subsp. pn... 35 5.2
CP001515_1533(CP001515|pid:none) Bifidobacterium animalis subsp.... 35 5.2
CP001618_2795(CP001618|pid:none) Beutenbergia cavernae DSM 12333... 35 5.2
AE003849_2393(AE003849|pid:none) Xylella fastidiosa 9a5c, comple... 35 5.2
CP001095_2378(CP001095|pid:none) Bifidobacterium longum subsp. i... 35 5.2
AY013286_1(AY013286|pid:none) Bacillus stearothermophilus alpha-... 35 6.7
AF130985_1(AF130985|pid:none) Bacillus stearothermophilus alpha-... 35 6.7
CP000826_1465(CP000826|pid:none) Serratia proteamaculans 568, co... 35 6.7
CP000376_453(CP000376|pid:none) Silicibacter sp. TM1040 mega pla... 35 6.7
AC134045_37(AC134045|pid:none) Oryza sativa (japonica cultivar-g... 35 8.8
CR954205_399(CR954205|pid:none) Ostreococcus tauri strain OTTH05... 35 8.8
CP001213_1500(CP001213|pid:none) Bifidobacterium animalis subsp.... 35 8.8
AK105431_1(AK105431|pid:none) Oryza sativa Japonica Group cDNA c... 35 8.8
CP001022_372(CP001022|pid:none) Exiguobacterium sibiricum 255-15... 35 8.8
(P16551) RecName: Full=Alpha-galactosidase; EC=3.2.1.22... 35 8.8
>CP001348_1205(CP001348|pid:none) Clostridium cellulolyticum H10,
complete genome.
Length = 604
Score = 172 bits (436), Expect(3) = 4e-77
Identities = 93/183 (50%), Positives = 118/183 (64%), Gaps = 6/183 (3%)
Frame = +2
Query: 161 NGLALTPPMGFNYWN-FDGCKTNLINETMMMDTAYAMSTNGMSKVGYEYVNLDDCWMAK- 334
NGLA TPPMG+N WN F G INET + A M ++GM + GY Y+NLDD WMA
Sbjct: 30 NGLAKTPPMGWNSWNIFHGD----INETKIKQIADTMVSSGMKEAGYVYLNLDDNWMANP 85
Query: 335 TRDENGNLRADPIRFPHGIKYLSDYIHSLGLKFGIYGDIGSETCQGYP--GSENYLEQDA 508
RD NGNLRADP RFP GI+ L+DY+H+ GLK GIYG G+ TC P GS+ Y ++DA
Sbjct: 86 ARDSNGNLRADPTRFPSGIRALADYVHAKGLKLGIYGCRGTMTCMNIPQSGSKGYEDKDA 145
Query: 509 KQFAEWGVDFVKMDGCNM-QVSDMKKAYTDLGQYLQNTGRPMVYS-CSWPTYAYVQNYNN 682
K FA WG+D++K D CN+ SDMK Y + L N GRP+V+S C+W +++ N
Sbjct: 146 KTFASWGIDYLKYDNCNIPNGSDMKTDYQKMQTALANCGRPIVFSICAWGYQSWMPATGN 205
Query: 683 AIR 691
R
Sbjct: 206 LWR 208
Score = 93.2 bits (230), Expect(3) = 4e-77
Identities = 48/100 (48%), Positives = 67/100 (67%), Gaps = 3/100 (3%)
Frame = +3
Query: 711 NLWREFQDITD---NFTEWTQILDEMEDSVPKRSQFAAPGSFNDPDMLEIGNGLENAVEY 881
NLWR DI D N EW + + D + + AAPG++NDPDMLEIGNG EY
Sbjct: 205 NLWRTTGDIADKWDNGNEWFKGIINAIDGNAQYTSSAAPGAWNDPDMLEIGNGGCTTEEY 264
Query: 882 KSMFSLWSIIAAPLIAGNDIISMSKEALEILINEEVIQVN 1001
++ S+WS++A+PLIAGNDI +MS+ +IL+N+EVI ++
Sbjct: 265 RTQMSMWSMMASPLIAGNDIRTMSQTTKDILLNKEVIAID 304
Score = 69.3 bits (168), Expect(3) = 4e-77
Identities = 36/95 (37%), Positives = 58/95 (61%), Gaps = 1/95 (1%)
Frame = +1
Query: 997 LTQDPLGIQGNRVYKNQKLEVFYQRTLINNSY-AIALFNRGDTNSDISITSEMLNLTNHQ 1173
+ QDP G+QG RV LE++ + N + A+AL NR S+I++ + ++
Sbjct: 303 IDQDPAGVQGKRVKSANGLEIWVKPLGTNGTTKAVALLNRNSATSNITVNWSDIGVSG-- 360
Query: 1174 NYNIRDLWSHTDNGTFSDTFTASXQPHGTVLIKLS 1278
+ +RDLW+ +D G+F+ ++TAS HGTVLIK+S
Sbjct: 361 SVTVRDLWAKSDKGSFTGSYTASVPSHGTVLIKIS 395
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3236559
Number of Hits to DB: 2,059,290,334
Number of extensions: 41250202
Number of successful extensions: 95859
Number of sequences better than 10.0: 216
Number of HSP's gapped: 95420
Number of HSP's successfully gapped: 456
Length of query: 475
Length of database: 1,051,180,864
Length adjustment: 132
Effective length of query: 343
Effective length of database: 623,955,076
Effective search space: 214016591068
Effective search space used: 214016591068
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)
|
| PSORT |
|
| VS (DIR, S) |
0 |
| VH (FL, L) |
0 |
| VF (FL, S) |
0 |
| AH (FL, L) |
0 |
| AF (FL, S) |
1 |
| SL (DIR, L) |
1 |
| SS (DIR, S) |
1 |
| SH (FL, L) |
0 |
| SF (FL, S) |
0 |
| CH (FL, L) |
0 |
| CF (FL, S) |
0 |
| FCL (DIR, L) |
0 |
| FC (DIR, S) |
0 |
| FC-IC (SUB) |
0 |