Contig-U14495-1
Contig ID Contig-U14495-1
Contig update 2002.12.18
Contig sequence
>Contig-U14495-1 (Contig-U14495-1Q) /CSM_Contig/Contig-U14495-1Q.Seq.d
GTATCATCCCACCTCTTGCGAGTCTTTATAAACTTACACAATGTCAATGA
ACCCAATCAAAAAAACCGAAGAAACCGTTGCAGCCCCAGCTGTCAACAAA
ATCAGTATCACCTTAACCTCAAGAAACCCAAAATCTCTTGAAAAAGTTTG
CGCTGATATCATCACTCTTGCTAAAAACAAGAAAGTCAAGGCTAAGGGTC
CAATCCGTATCCCAAACAAAGTCTTAAAAATCACCACCCGTAAAAGTCCA
TGTGGTGAAGGTACAAACACCTGGGATCGTTTCGAAATGAGAATCCACAA
ACGTGTCATCCACATCTTATCCACCCAAGATTTCGTCAAGGAAATGAACA
CCATCTCAATCGAAGCTTGGCGTTGATGTTGAAGTCATCATGGATAAAAA
AAGAAGCCAAAAACTAAATTAATTAATCTTTAATTTATTAATAAACTTTT
TTTATTATTTATAAAAAAAAAAAAAAAAAAAAA

Gap no gap
Contig length 483
Chromosome number (1..6, M) 3
Chromosome length 6358359
Start point 863294
End point 862811
Strand (PLUS/MINUS) MINUS
Number of clones 19
Number of EST 26
Link to clone list U14495
List of clone(s)

est1=VSG353Z,-22,425
est2=SHA481F,1,484
est3=SHA481Z,1,443
est4=VFM670F,1,472
est5=VFM670Z,1,442
est6=VSJ856F,5,472
est7=VSJ856Z,5,455
est8=VSC595E,8,467
est9=SSB793E,17,484
est10=VSE290E,17,463
est11=VSB807E,18,477
est12=VSG353F,21,472
est13=VSD308F,23,472
est14=VSD308Z,33,454
est15=VSJ653F,33,471
est16=VSJ653Z,33,452
est17=VSB785E,36,484
est18=VSJ165F,37,472
est19=VSJ165Z,37,454
est20=VSJ493F,37,472
est21=VSJ493Z,37,454
est22=FC-IC0103F,50,260
est23=VSC121E,51,467
est24=VSD384Z,97,422
est25=VSB441Z,100,462
est26=VSE361E,190,463
Translated Amino Acid sequence
yhptscesl*TYTMSMNPIKKTEETVAAPAVNKISITLTSRNPKSLEKVCADIITLAKNK
KVKAKGPIRIPNKVLKITTRKSPCGEGTNTWDRFEMRIHKRVIHILSTQDFVKEMNTISI
EAWR*c*shhg*kkkpktklinl*finklfllfikkkkkk


Translated Amino Acid sequence (All Frames)
Frame A:
vsshllrvfinlhnvnepnqknrrnrcspscqqnqyhlnlkkpkis*kslr*yhhsc*kq
esqg*gsnpypkqslknhhp*ksmw*rykhlgsfrnenpqtchphlihprfrqgnehhln
rslalmlksswikkeakn*in*sliy**tffiiykkkkkkk


Frame B:
yhptscesl*TYTMSMNPIKKTEETVAAPAVNKISITLTSRNPKSLEKVCADIITLAKNK
KVKAKGPIRIPNKVLKITTRKSPCGEGTNTWDRFEMRIHKRVIHILSTQDFVKEMNTISI
EAWR*c*shhg*kkkpktklinl*finklfllfikkkkkk


Frame C:
iipplaslykltqcq*tqskkpkkplqpqlstksvsp*pqetqnllkkfalisslllktr
ksrlrvqsvsqtks*ksppvkvhvvkvqtpgivsk*estnvsstsyppkissrk*tpsqs
klgvdvevimdkkrsqkln*lifnllinffyyl*kkkkkk


own update 2004. 6.10
Homology vs CSM-cDNA
Query= Contig-U14495-1 (Contig-U14495-1Q)
/CSM_Contig/Contig-U14495-1Q.Seq.d
(483 letters)

Database: CSM
6905 sequences; 5,674,871 total letters


Score E
Sequences producing significant alignments: (bits) Value

Contig-U14495-1 (Contig-U14495-1Q) /CSM_Contig/Conti... 801 0.0
Contig-U12392-1 (Contig-U12392-1Q) /CSM_Contig/Conti... 38 0.008
Contig-U07119-1 (Contig-U07119-1Q) /CSM_Contig/Conti... 36 0.033
Contig-U04637-1 (Contig-U04637-1Q) /CSM_Contig/Conti... 36 0.033
Contig-U07909-1 (Contig-U07909-1Q) /CSM_Contig/Conti... 34 0.13
Contig-U14597-1 (Contig-U14597-1Q) /CSM_Contig/Conti... 32 0.52
Contig-U13684-1 (Contig-U13684-1Q) /CSM_Contig/Conti... 32 0.52
Contig-U13415-1 (Contig-U13415-1Q) /CSM_Contig/Conti... 32 0.52
Contig-U13190-1 (Contig-U13190-1Q) /CSM_Contig/Conti... 32 0.52
Contig-U12200-1 (Contig-U12200-1Q) /CSM_Contig/Conti... 32 0.52

>Contig-U14495-1 (Contig-U14495-1Q) /CSM_Contig/Contig-U14495-1Q.Seq.d
Length = 483

Score = 801 bits (404), Expect = 0.0
Identities = 432/446 (96%)
Strand = Plus / Plus


Query: 1 gtatcatcccacctcttgcgagtctttataaacttacacaatgtcaatgaacccaatcnn 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gtatcatcccacctcttgcgagtctttataaacttacacaatgtcaatgaacccaatcaa 60


Query: 61 nnnnnccgaagaaaccgttgcagccccagctgtcaacaaaatcagtatcaccttaacctc 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 aaaaaccgaagaaaccgttgcagccccagctgtcaacaaaatcagtatcaccttaacctc 120


Query: 121 aagaaacccaaaatctcttgaaaaagtttgcgctgatatcatcactcttgctaaaaacaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 aagaaacccaaaatctcttgaaaaagtttgcgctgatatcatcactcttgctaaaaacaa 180


Query: 181 gaaagtcaaggctaagggtccaatccgtatcccaaacaaagtcttaaaaatcaccacccg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gaaagtcaaggctaagggtccaatccgtatcccaaacaaagtcttaaaaatcaccacccg 240


Query: 241 taaaagtccatgtggtgaaggtacaaacacctgggatcgtttcgaaatgagaatccacaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 taaaagtccatgtggtgaaggtacaaacacctgggatcgtttcgaaatgagaatccacaa 300


Query: 301 acgtgtcatccacatcttatccacccaagatttcgtcaaggaaatgaacaccatctcaat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 acgtgtcatccacatcttatccacccaagatttcgtcaaggaaatgaacaccatctcaat 360


Query: 361 cgaagcttggcgttgatgttgaagtcatcatggatnnnnnnngaagccaaaaactaaatt 420
||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 361 cgaagcttggcgttgatgttgaagtcatcatggataaaaaaagaagccaaaaactaaatt 420


Query: 421 aattaatctttaatttattaataaac 446
||||||||||||||||||||||||||
Sbjct: 421 aattaatctttaatttattaataaac 446


>Contig-U12392-1 (Contig-U12392-1Q) /CSM_Contig/Contig-U12392-1Q.Seq.d
Length = 1760

Score = 38.2 bits (19), Expect = 0.008
Identities = 19/19 (100%)
Strand = Plus / Minus


Query: 426 atctttaatttattaataa 444
|||||||||||||||||||
Sbjct: 65 atctttaatttattaataa 47


>Contig-U07119-1 (Contig-U07119-1Q) /CSM_Contig/Contig-U07119-1Q.Seq.d
Length = 274

Score = 36.2 bits (18), Expect = 0.033
Identities = 24/26 (92%)
Strand = Plus / Plus


Query: 417 aattaattaatctttaatttattaat 442
||||||||||| ||| ||||||||||
Sbjct: 92 aattaattaatattttatttattaat 117


Database: CSM
Posted date: Jun 9, 2004 7:35 PM
Number of letters in database: 5,674,871
Number of sequences in database: 6905

Lambda K H
1.37 0.711 1.31

Gapped
Lambda K H
1.37 0.711 1.31


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4339
Number of Sequences: 6905
Number of extensions: 4339
Number of successful extensions: 457
Number of sequences better than 10.0: 134
length of query: 483
length of database: 5,674,871
effective HSP length: 16
effective length of query: 467
effective length of database: 5,564,391
effective search space: 2598570597
effective search space used: 2598570597
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 14 (28.2 bits)
dna update 2008.12.23
Homology vs DNA
Query= Contig-U14495-1 (Contig-U14495-1Q) /CSM_Contig/Contig-U14495-1Q.Seq.d
(483 letters)

Database: ddbj_A
92,845,959 sequences; 95,242,211,685 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value N

(BJ391663) Dictyostelium discoideum cDNA clone:dds24b22, 5' ... 599 0.0 3
(BJ416508) Dictyostelium discoideum cDNA clone:ddv26k18, 5' ... 591 0.0 3
(AU270583) Dictyostelium discoideum vegetative cDNA clone:VS... 599 0.0 3
(BJ403320) Dictyostelium discoideum cDNA clone:dds24b22, 3' ... 599 0.0 3
(AU262659) Dictyostelium discoideum vegetative cDNA clone:VS... 599 0.0 3
(AU270584) Dictyostelium discoideum vegetative cDNA clone:VS... 599 0.0 3
(BJ435282) Dictyostelium discoideum cDNA clone:ddv26k18, 3' ... 591 0.0 3
(AU262998) Dictyostelium discoideum vegetative cDNA clone:VS... 599 0.0 3
(AU262257) Dictyostelium discoideum vegetative cDNA clone:VS... 599 0.0 3
(AU266354) Dictyostelium discoideum vegetative cDNA clone:VS... 599 0.0 3
(AU269506) Dictyostelium discoideum vegetative cDNA clone:VS... 654 0.0 2
(AU266355) Dictyostelium discoideum vegetative cDNA clone:VS... 593 0.0 3
(AU263812) Dictyostelium discoideum vegetative cDNA clone:VS... 599 0.0 3
(AU270263) Dictyostelium discoideum vegetative cDNA clone:VS... 599 0.0 3
(AU262247) Dictyostelium discoideum vegetative cDNA clone:VS... 599 0.0 3
(AU270009) Dictyostelium discoideum vegetative cDNA clone:VS... 599 0.0 3
(AU270010) Dictyostelium discoideum vegetative cDNA clone:VS... 599 0.0 3
(AU263813) Dictyostelium discoideum vegetative cDNA clone:VS... 599 0.0 3
(AU269507) Dictyostelium discoideum vegetative cDNA clone:VS... 599 0.0 3
(AU262345) Dictyostelium discoideum vegetative cDNA clone:VS... 599 e-177 2
(AU270262) Dictyostelium discoideum vegetative cDNA clone:VS... 561 e-173 3
(AU037339) Dictyostelium discoideum slug cDNA, clone SSB793. 537 e-167 3
(AU262017) Dictyostelium discoideum vegetative cDNA clone:VS... 531 e-157 2
(AU071558) Dictyostelium discoideum slug cDNA, clone SSB793. 379 e-119 2
(AU263943) Dictyostelium discoideum vegetative cDNA clone:VS... 389 e-119 3
(AU263051) Dictyostelium discoideum vegetative cDNA clone:VS... 353 e-103 2
(AU271346) Dictyostelium discoideum gamete cDNA clone:FC-IC0... 387 e-103 1
(EC761736) PSE00007516 rw_mgpallid Polysphondylium pallidum ... 168 2e-51 4
(EC761549) PSE00004425 rw_mgpallid Polysphondylium pallidum ... 168 2e-51 4
(EC760387) PSE00002418 rw_mgpallid Polysphondylium pallidum ... 168 2e-51 4
(EC762413) PSE00008198 rw_mgpallid Polysphondylium pallidum ... 168 2e-51 4
(EC762738) PSE00007234 rw_mgpallid Polysphondylium pallidum ... 149 6e-36 2
(EC745835) PSE00003065 rw_mgpallid Polysphondylium pallidum ... 90 3e-18 2
(EH431260) NPE00000761 Neocallimastix patriciarum ZAP II cDN... 76 6e-13 2
(AP009001) Bombyx mori genomic DNA, chromosome 20, BAC clone... 86 1e-12 1
(AV399798) Bombyx mori cDNA clone:NV120797. 86 1e-12 1
(DN236947) EST00072 BmP Bombyx mori cDNA clone BmpS212 3', m... 86 1e-12 1
(CK538318) rswha0_000138.y1 swh Bombyx mori cDNA, mRNA seque... 86 1e-12 1
(CK538163) rswgb0_007678.y1 swg Bombyx mori cDNA, mRNA seque... 86 1e-12 1
(CK537900) rswgb0_007231.y1 swg Bombyx mori cDNA, mRNA seque... 86 1e-12 1
(CK531654) rswga0_009832.y1 swg Bombyx mori cDNA, mRNA seque... 86 1e-12 1
(CK496499) rswbb0_005411.y1 swb Bombyx mori cDNA, mRNA seque... 86 1e-12 1
(CK487744) rswab0_005028.y1 swa Bombyx mori cDNA, mRNA seque... 86 1e-12 1
(BY945049) Bombyx mori cDNA, clone:E_FL_e100_17L13_R_0, 3' e... 86 1e-12 1
(BY944924) Bombyx mori cDNA, clone:E_FL_e100_16D24_R_0, 3' e... 86 1e-12 1
(BY944909) Bombyx mori cDNA, clone:E_FL_e100_16B18_R_0, 3' e... 86 1e-12 1
(BY944852) Bombyx mori cDNA, clone:E_FL_e100_15J19_R_0, 3' e... 86 1e-12 1
(BY944540) Bombyx mori cDNA, clone:E_FL_e100_12E06_R_0, 3' e... 86 1e-12 1
(BY944297) Bombyx mori cDNA, clone:E_FL_e100_09O04_R_0, 3' e... 86 1e-12 1
(BY943924) Bombyx mori cDNA, clone:E_FL_e100_25I17_R_0, 3' e... 86 1e-12 1
(BY943907) Bombyx mori cDNA, clone:E_FL_e100_25G07_R_0, 3' e... 86 1e-12 1
(BY943851) Bombyx mori cDNA, clone:E_FL_e100_24N04_R_0, 3' e... 86 1e-12 1
(BY943654) Bombyx mori cDNA, clone:E_FL_e100_23A07_R_0, 3' e... 86 1e-12 1
(BY943604) Bombyx mori cDNA, clone:E_FL_e100_22G24_R_0, 3' e... 86 1e-12 1
(BY943492) Bombyx mori cDNA, clone:E_FL_e100_21G16_R_0, 3' e... 86 1e-12 1
(BY943444) Bombyx mori cDNA, clone:E_FL_e100_20P07_R_0, 3' e... 86 1e-12 1
(BY943395) Bombyx mori cDNA, clone:E_FL_e100_20I24_R_0, 3' e... 86 1e-12 1
(BY942908) Bombyx mori cDNA, clone:E_FL_e100_05J08_R_0, 3' e... 86 1e-12 1
(BY942834) Bombyx mori cDNA, clone:E_FL_e100_05A13_R_0, 3' e... 86 1e-12 1
(BY942461) Bombyx mori cDNA, clone:E_FL_e100_02B04_R_0, 3' e... 86 1e-12 1
(BY942392) Bombyx mori cDNA, clone:E_FL_e100_01I14_R_0, 3' e... 86 1e-12 1
(BY942048) Bombyx mori cDNA, clone:E_FL_e100_17L13_F_0, 5' e... 86 1e-12 1
(BY942022) Bombyx mori cDNA, clone:E_FL_e100_17G24_F_0, 5' e... 86 1e-12 1
(BY941720) Bombyx mori cDNA, clone:E_FL_e100_15J19_F_0, 5' e... 86 1e-12 1
(BY941498) Bombyx mori cDNA, clone:E_FL_e100_14H18_F_0, 5' e... 86 1e-12 1
(BY941240) Bombyx mori cDNA, clone:E_FL_e100_13A17_F_0, 5' e... 86 1e-12 1
(BY939975) Bombyx mori cDNA, clone:E_FL_e100_25F22_F_0, 5' e... 86 1e-12 1
(BY939704) Bombyx mori cDNA, clone:E_FL_e100_23O02_F_0, 5' e... 86 1e-12 1
(BY939575) Bombyx mori cDNA, clone:E_FL_e100_23A07_F_0, 5' e... 86 1e-12 1
(BY939461) Bombyx mori cDNA, clone:E_FL_e100_22G24_F_0, 5' e... 86 1e-12 1
(BY939204) Bombyx mori cDNA, clone:E_FL_e100_20P07_F_0, 5' e... 86 1e-12 1
(BY939141) Bombyx mori cDNA, clone:E_FL_e100_20I24_F_0, 5' e... 86 1e-12 1
(BY938307) Bombyx mori cDNA, clone:E_FL_e100_05J08_F_0, 5' e... 86 1e-12 1
(BY938187) Bombyx mori cDNA, clone:E_FL_e100_05A13_F_0, 5' e... 86 1e-12 1
(BY937613) Bombyx mori cDNA, clone:E_FL_e100_02B04_F_0, 5' e... 86 1e-12 1
(BY937359) Bombyx mori cDNA, clone:E_FL_prW-_14N21_F_0, 5' e... 86 1e-12 1
(BY937285) Bombyx mori cDNA, clone:E_FL_prW-_14I03_F_0, 5' e... 86 1e-12 1
(BY937077) Bombyx mori cDNA, clone:E_FL_prW-_13H21_F_0, 5' e... 86 1e-12 1
(BY935711) Bombyx mori cDNA, clone:E_FL_prW-_06E17_F_0, 5' e... 86 1e-12 1
(BY934900) Bombyx mori cDNA, clone:E_FL_prW-_02G16_F_0, 5' e... 86 1e-12 1
(BY928267) Bombyx mori cDNA, clone:E_EL_fcP8_15H04_R_0, 3' e... 86 1e-12 1
(BY927852) Bombyx mori cDNA, clone:E_EL_fcP8_10F04_R_0, 3' e... 86 1e-12 1
(BY919883) Bombyx mori cDNA, clone:E_EL_fcP8_15H04_F_0, 5' e... 86 1e-12 1
(BP183433) Bombyx mori cDNA, clone: NRPG1910, 5' end sequence. 86 1e-12 1
(BP117144) Bombyx mori cDNA, clone:brS-1313, 5' end sequence. 86 1e-12 1
(BJ985711) Bombyx mori cDNA, clone:E_FL_mxg-_19F07_F_0, 5' e... 86 1e-12 1
(BJ984962) Bombyx mori cDNA, clone:E_FL_mxg-_15A23_F_0, 5' e... 86 1e-12 1
(EH431289) NPE00000495 Neocallimastix patriciarum ZAP II cDN... 76 2e-12 2
(AU263942) Dictyostelium discoideum vegetative cDNA clone:VS... 84 5e-12 1
(EH431229) NPE00000858 Neocallimastix patriciarum ZAP II cDN... 76 8e-12 2
(EH431248) NPE00000728 Neocallimastix patriciarum ZAP II cDN... 76 9e-12 2
(EH431253) NPE00000232 Neocallimastix patriciarum ZAP II cDN... 76 9e-12 2
(EH431282) NPE00000284 Neocallimastix patriciarum ZAP II cDN... 76 1e-10 2
(AY769336) Bombyx mori ribosomal protein S20 (RpS20) mRNA, c... 78 3e-10 1
(AV405927) Bombyx mori cDNA clone:wdV30406. 78 3e-10 1
(AV405686) Bombyx mori cDNA clone:wdV30114. 78 3e-10 1
(AV405392) Bombyx mori cDNA clone:wdV10551. 78 3e-10 1
(AV402207) Bombyx mori cDNA clone:heS00696. 78 3e-10 1
(DC537775) Bombyx mori cDNA, clone:E_FL_MFB-_21E16_F_0, 5' e... 78 3e-10 1
(DC536981) Bombyx mori cDNA, clone:E_FL_MFB-_14P22_F_0, 5' e... 78 3e-10 1

>(BJ391663) Dictyostelium discoideum cDNA clone:dds24b22, 5' end,
single read.
Length = 490

Score = 599 bits (302), Expect(3) = 0.0
Identities = 302/302 (100%)
Strand = Plus / Plus


Query: 66 ccgaagaaaccgttgcagccccagctgtcaacaaaatcagtatcaccttaacctcaagaa 125
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 66 ccgaagaaaccgttgcagccccagctgtcaacaaaatcagtatcaccttaacctcaagaa 125


Query: 126 acccaaaatctcttgaaaaagtttgcgctgatatcatcactcttgctaaaaacaagaaag 185
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 126 acccaaaatctcttgaaaaagtttgcgctgatatcatcactcttgctaaaaacaagaaag 185


Query: 186 tcaaggctaagggtccaatccgtatcccaaacaaagtcttaaaaatcaccacccgtaaaa 245
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 186 tcaaggctaagggtccaatccgtatcccaaacaaagtcttaaaaatcaccacccgtaaaa 245


Query: 246 gtccatgtggtgaaggtacaaacacctgggatcgtttcgaaatgagaatccacaaacgtg 305
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 246 gtccatgtggtgaaggtacaaacacctgggatcgtttcgaaatgagaatccacaaacgtg 305


Query: 306 tcatccacatcttatccacccaagatttcgtcaaggaaatgaacaccatctcaatcgaag 365
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 306 tcatccacatcttatccacccaagatttcgtcaaggaaatgaacaccatctcaatcgaag 365


Query: 366 ct 367
||
Sbjct: 366 ct 367

Score = 115 bits (58), Expect(3) = 0.0
Identities = 58/58 (100%)
Strand = Plus / Plus


Query: 1 gtatcatcccacctcttgcgagtctttataaacttacacaatgtcaatgaacccaatc 58
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gtatcatcccacctcttgcgagtctttataaacttacacaatgtcaatgaacccaatc 58

Score = 56.0 bits (28), Expect(3) = 0.0
Identities = 28/28 (100%)
Strand = Plus / Plus


Query: 368 tggcgttgatgttgaagtcatcatggat 395
||||||||||||||||||||||||||||
Sbjct: 367 tggcgttgatgttgaagtcatcatggat 394

Lambda K H
1.37 0.711 1.31

Matrix: blastn matrix:1 -3
Number of Sequences: 92845959
Number of Hits to DB: 382,995,618
Number of extensions: 20787941
Number of successful extensions: 1454533
Number of sequences better than 10.0: 8404
Length of query: 483
Length of database: 95,242,211,685
Length adjustment: 23
Effective length of query: 460
Effective length of database: 93,106,754,628
Effective search space: 42829107128880
Effective search space used: 42829107128880
X1: 11 (21.8 bits)
S2: 21 (42.1 bits)

protein update 2009. 7.11
Homology vs Protein
Query= Contig-U14495-1 (Contig-U14495-1Q) /CSM_Contig/Contig-U14495-1Q.Seq.d
(483 letters)

Database: nrp_B
3,236,559 sequences; 1,051,180,864 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value

(Q54Y41) RecName: Full=40S ribosomal protein S20; 217 5e-57
(Q9STY6) RecName: Full=40S ribosomal protein S20-2; &AK227448_1... 137 2e-31
CP000583_102(CP000583|pid:none) Ostreococcus lucimarinus CCE9901... 135 5e-31
AM427997_1(AM427997|pid:none) Vitis vinifera contig VV78X043700.... 133 2e-30
AK062522_1(AK062522|pid:none) Oryza sativa Japonica Group cDNA c... 132 5e-30
CP001325_265(CP001325|pid:none) Micromonas sp. RCC299 chromosome... 131 9e-30
EU952622_1(EU952622|pid:none) Zea mays clone 1284507 40S ribosom... 131 9e-30
EU302580_1(EU302580|pid:none) Lineus viridis ribosomal protein r... 130 1e-29
AB170385_1(AB170385|pid:none) Macaca fascicularis brain cDNA clo... 130 2e-29
AB019235_13(AB019235|pid:none) Arabidopsis thaliana genomic DNA,... 130 2e-29
AY758353_1(AY758353|pid:none) Zea mays ribosomal protein S10p/S2... 130 2e-29
EU116931_1(EU116931|pid:none) Barentsia elongata putative riboso... 130 2e-29
EU047545_1(EU047545|pid:none) Phlebotomus papatasi 40S ribosomal... 129 3e-29
EU124622_1(EU124622|pid:none) Lutzomyia longipalpis 40S ribosoma... 129 3e-29
AY892286_1(AY892286|pid:none) Synthetic construct Homo sapiens c... 129 3e-29
AK301342_1(AK301342|pid:none) Homo sapiens cDNA FLJ58953 complet... 129 3e-29
(P60866) RecName: Full=40S ribosomal protein S20; &(P60867) Rec... 129 3e-29
AJ783893_1(AJ783893|pid:none) Dascillus cervinus mRNA for S20e r... 129 5e-29
EF145241_1(EF145241|pid:none) Populus trichocarpa clone WS01122_... 129 5e-29
EU125005_1(EU125005|pid:none) Eurythoe complanata ribosomal prot... 129 5e-29
EU558301_1(EU558301|pid:none) Novocrania anomala putative 40S ri... 128 6e-29
AJ312336_1(AJ312336|pid:none) Oncorhynchus mykiss partial mRNA f... 128 8e-29
BT080117_1(BT080117|pid:none) Esox lucius clone eluc-evq-537-202... 128 8e-29
AJ563463_1(AJ563463|pid:none) Crassostrea gigas mRNA for ribosom... 128 8e-29
BC062282_1(BC062282|pid:none) Danio rerio ribosomal protein S20,... 128 8e-29
AB188377_1(AB188377|pid:none) Pelodiscus sinensis PsRPS20 mRNA f... 127 1e-28
BC075180_1(BC075180|pid:none) Xenopus laevis MGC82136 protein, m... 127 1e-28
AY550070_1(AY550070|pid:none) Sus scrofa 40S ribosomal protein S... 127 1e-28
AB291574_1(AB291574|pid:none) Solea senegalensis rpS20 mRNA for ... 127 1e-28
AF526250_1(AF526250|pid:none) Chlamys farreri clone iolscfcl363c... 127 1e-28
EU284890_1(EU284890|pid:none) TSA: Elaeis guineensis EgEfMPOB000... 127 1e-28
BT080933_1(BT080933|pid:none) Caligus clemensi clone ccle-evs-51... 127 2e-28
EU934284_1(EU934284|pid:none) TSA: Anopheles darlingi AD-185 40S... 127 2e-28
AC157891_25(AC157891|pid:none) Medicago truncatula chromosome 7 ... 126 2e-28
(Q5R924) RecName: Full=40S ribosomal protein S20; &CR859572_1(C... 126 2e-28
BT073056_1(BT073056|pid:none) Oncorhynchus mykiss clone omyk-evn... 126 2e-28
AJ783763_1(AJ783763|pid:none) Papilio dardanus mRNA for ribosoma... 125 4e-28
DQ910362_1(DQ910362|pid:none) Anopheles funestus clone AF-79 40S... 125 5e-28
(A1XQU9) RecName: Full=40S ribosomal protein S20; &DQ629171_1(D... 125 5e-28
EU139188_1(EU139188|pid:none) Flustra foliacea putative 40S ribo... 125 7e-28
DQ084045_1(DQ084045|pid:none) Oxyuranus scutellatus 40S ribosoma... 124 8e-28
AF503586_1(AF503586|pid:none) Branchiostoma belcheri tsingtaunes... 124 8e-28
CP000881_130(CP000881|pid:none) Hemiselmis andersenii chromosome... 124 8e-28
DQ458985_1(DQ458985|pid:none) Marmota monax ribosomal protein S2... 124 1e-27
FJ588149_1(FJ588149|pid:none) Rimicaris exoculata 40S ribosomal ... 124 1e-27
AC144805_11(AC144805|pid:none) Medicago truncatula clone mth2-72... 124 1e-27
AY857478_1(AY857478|pid:none) Suberites domuncula S20 mRNA, comp... 121 7e-27
AM980960_1(AM980960|pid:none) Brachionus plicatilis partial mRNA... 121 7e-27
AE017343_139(AE017343|pid:none) Cryptococcus neoformans var. neo... 121 9e-27
AY231743_1(AY231743|pid:none) Drosophila yakuba clone yak-em_RpS... 121 9e-27
EZ048870_1(EZ048870|pid:none) TSA: Stomoxys calcitrans SC-4-44-1... 121 9e-27
(P55828) RecName: Full=40S ribosomal protein S20; &AE014297_298... 121 9e-27
AY935983_1(AY935983|pid:none) Palaemonetes pugio ribosomal prote... 119 3e-26
EF634894_1(EF634894|pid:none) Pristionchus lheritieri small subu... 119 4e-26
EF634909_1(EF634909|pid:none) Pristionchus sp. 15 RS5229 small s... 119 4e-26
AY071353_1(AY071353|pid:none) Drosophila melanogaster RE38972 fu... 117 1e-25
(O74893) RecName: Full=40S ribosomal protein S20; &AF282863_1(A... 117 1e-25
EF634904_1(EF634904|pid:none) Pristionchus sp. 10 RS5133 small s... 117 1e-25
EF634900_1(EF634900|pid:none) Pristionchus sp. 6 RS5101 small su... 117 1e-25
CU633458_5(CU633458|pid:none) Podospora anserina genomic DNA chr... 117 2e-25
AK343176_1(AK343176|pid:none) Acyrthosiphon pisum ACYPI009132 mR... 115 4e-25
BC146636_1(BC146636|pid:none) Xenopus laevis hypothetical protei... 111 7e-24
AM910990_22(AM910990|pid:none) Plasmodium knowlesi strain H chro... 109 4e-23
AP007171_421(AP007171|pid:none) Aspergillus oryzae RIB40 genomic... 108 6e-23
AM920435_438(AM920435|pid:none) Penicillium chrysogenum Wisconsi... 108 6e-23
DQ480535_1(DQ480535|pid:none) Schistosoma mansoni 40S ribosomal ... 105 7e-22
CR940353_137(CR940353|pid:none) Theileria annulata strain Ankara... 103 2e-21
FM992695_720(FM992695|pid:none) Candida dubliniensis CD36 chromo... 103 3e-21
FN316208_1(FN316208|pid:none) Schistosoma japonicum isolate Anhu... 102 3e-21
FN316207_1(FN316207|pid:none) Schistosoma japonicum isolate Anhu... 102 3e-21
AM494965_108(AM494965|pid:none) Leishmania braziliensis chromoso... 100 2e-20
CR382126_1090(CR382126|pid:none) Kluyveromyces lactis strain NRR... 100 3e-20
CU928181_223(CU928181|pid:none) Zygosaccharomyces rouxii strain ... 97 1e-19
FN392320_1057(FN392320|pid:none) Pichia pastoris GS115 chromosom... 96 6e-19
AM849501_1(AM849501|pid:none) Pomphorhynchus laevis partial mRNA... 95 9e-19
CR380957_130(CR380957|pid:none) Candida glabrata strain CBS138 c... 95 9e-19
AE016815_252(AE016815|pid:none) Ashbya gossypii (= Eremothecium ... 93 3e-18
BC011413_1(BC011413|pid:none) Mus musculus predicted gene, EG625... 91 1e-17
BT037432_1(BT037432|pid:none) Zea mays full-length cDNA clone ZM... 84 2e-15
BT036470_1(BT036470|pid:none) Zea mays full-length cDNA clone ZM... 78 9e-14
(P23357) RecName: Full=30S ribosomal protein S10P; AltName: Full... 77 2e-13
CP001365_156(CP001365|pid:none) Halorubrum lacusprofundi ATCC 49... 77 2e-13
(B6YVG1) RecName: Full=30S ribosomal protein S10P; &CP000855_75... 77 3e-13
EU016614_14(EU016614|pid:none) Uncultured Group I marine crenarc... 76 3e-13
(Q6L201) RecName: Full=30S ribosomal protein S10P; &AE017261_41... 76 5e-13
CP000866_1029(CP000866|pid:none) Nitrosopumilus maritimus SCM1, ... 76 5e-13
(Q18EY6) RecName: Full=30S ribosomal protein S10P; &AM180088_24... 76 5e-13
(Q979T2) RecName: Full=30S ribosomal protein S10P; &BA000011_10... 75 8e-13
(Q5JFZ5) RecName: Full=30S ribosomal protein S10P; &AP006878_30... 75 8e-13
(A6UV42) RecName: Full=30S ribosomal protein S10P; &CP000743_77... 75 1e-12
(O59152) RecName: Full=30S ribosomal protein S10P; &BA000001_15... 75 1e-12
(O29324) RecName: Full=30S ribosomal protein S10P; &AE000782_92... 75 1e-12
(P61885) RecName: Full=30S ribosomal protein S10P; &(P61886) Re... 74 1e-12
(Q12WT4) RecName: Full=30S ribosomal protein S10P; &CP000300_10... 74 2e-12
CP000505_640(CP000505|pid:none) Thermofilum pendens Hrk 5, compl... 74 2e-12
(B1L712) RecName: Full=30S ribosomal protein S10P; &CP000968_14... 74 2e-12
(Q2NEL2) RecName: Full=30S ribosomal protein S10P; &CP000102_13... 74 2e-12
(P54029) RecName: Full=30S ribosomal protein S10P; 73 3e-12
(Q3IUD7) RecName: Full=30S ribosomal protein S10P; &CR936257_15... 73 4e-12
(A0B7D7) RecName: Full=30S ribosomal protein S10P; &CP000477_80... 73 4e-12
(B1YB34) RecName: Full=30S ribosomal protein S10P; &CP001014_17... 73 4e-12
EZ000064_1(EZ000064|pid:none) TSA: Schistosoma japonicum SJCHGC0... 72 5e-12
(P14039) RecName: Full=30S ribosomal protein S10P; &CP000742_67... 72 5e-12
CP001338_1471(CP001338|pid:none) Candidatus Methanosphaerula pal... 72 9e-12
(A2STE9) RecName: Full=30S ribosomal protein S10P; &CP000559_14... 72 9e-12
(Q6LXI0) RecName: Full=30S ribosomal protein S10P; &BX950229_13... 72 9e-12
(A4FWE8) RecName: Full=30S ribosomal protein S10P; &CP000609_20... 71 1e-11
R3MX10(S06625) ribosomal protein S10 - Methanococcus vannielii ... 71 1e-11
(Q8TYP7) RecName: Full=30S ribosomal protein S10P; &AE009439_24... 70 2e-11
(Q2FRI1) RecName: Full=30S ribosomal protein S10P; &CP000254_15... 70 2e-11
(A5ULM4) RecName: Full=30S ribosomal protein S10P; &CP000678_89... 69 7e-11
(A2BN42) RecName: Full=30S ribosomal protein S10P; &CP000493_15... 67 2e-10
CP000852_97(CP000852|pid:none) Caldivirga maquilingensis IC-167,... 67 3e-10
S54735(S54735;S38465)ribosomal protein 10 - Desulfurococcus mobi... 64 2e-09
(Q9YAV2) RecName: Full=30S ribosomal protein S10P; &A72570(A725... 62 9e-09
(Q976B2) RecName: Full=30S ribosomal protein S10P; &BA000023_29... 61 2e-08
U97371_1(U97371|pid:none) Schizosaccharomyces pombe 40S ribosoma... 59 6e-08
(P35027) RecName: Full=30S ribosomal protein S10P; &AE006641_19... 58 1e-07
(A4YCR7) RecName: Full=30S ribosomal protein S10P; &CP000682_42... 57 3e-07
(Q74MI5) RecName: Full=30S ribosomal protein S10P; &AE017199_84... 55 6e-07
(Q1MPR4) RecName: Full=30S ribosomal protein S10; &AM180252_958... 51 1e-05
(B7J242) RecName: Full=30S ribosomal protein S10; &(P94266) Rec... 51 1e-05
AL590450_72(AL590450|pid:none) chromosome XI of strain GB-M1 of ... 51 2e-05
EU363474_1(EU363474|pid:none) Borrelia afzelii strain VS461 30S ... 50 2e-05
EU363468_1(EU363468|pid:none) Borrelia burgdorferi strain VS215 ... 50 2e-05
EU363479_1(EU363479|pid:none) Borrelia burgdorferi strain B31 30... 50 2e-05
(Q1D775) RecName: Full=30S ribosomal protein S10; &CP000113_321... 50 2e-05
(B8DN95) RecName: Full=30S ribosomal protein S10; &AB214903_4(A... 50 2e-05
EU363475_1(EU363475|pid:none) Borrelia garinii strain VS102 30S ... 50 2e-05
(A7HBL8) RecName: Full=30S ribosomal protein S10; &(Q2IJ85) Rec... 49 6e-05
(Q3BWY4) RecName: Full=30S ribosomal protein S10; &AM039952_998... 49 8e-05
(Q6KI56) RecName: Full=30S ribosomal protein S10; &AE017308_234... 48 1e-04
(P41207) RecName: Full=30S ribosomal protein S10P; Flags: Fragme... 48 1e-04
(A8GT70) RecName: Full=30S ribosomal protein S10; &(B0BUR1) Rec... 48 1e-04
CP001322_1903(CP001322|pid:none) Desulfatibacillum alkenivorans ... 47 2e-04
CP001227_766(CP001227|pid:none) Rickettsia peacockii str. Rustic... 47 3e-04
CP001612_780(CP001612|pid:none) Rickettsia africae ESF-5, comple... 46 4e-04
(Q4UMT0) RecName: Full=30S ribosomal protein S10; &CP000053_277... 46 4e-04
(Q92GW5) RecName: Full=30S ribosomal protein S10; &AE006914_100... 46 5e-04
(B2FQ44) RecName: Full=30S ribosomal protein S10; &AM743169_856... 46 5e-04
(Q68W77) RecName: Full=30S ribosomal protein S10; &AE017197_625... 46 5e-04
(P48850) RecName: Full=30S ribosomal protein S10; &AJ235272_167... 46 5e-04
CP001016_1334(CP001016|pid:none) Beijerinckia indica subsp. indi... 45 9e-04
CP000830_275(CP000830|pid:none) Dinoroseobacter shibae DFL 12, c... 45 9e-04
(A8GPF1) RecName: Full=30S ribosomal protein S10; &CP000847_939... 45 9e-04
(Q8EUB2) RecName: Full=30S ribosomal protein S10; 45 9e-04
(Q1GK38) RecName: Full=30S ribosomal protein S10; &(Q5LLU5) Rec... 45 0.001
CP001087_3569(CP001087|pid:none) Desulfobacterium autotrophicum ... 45 0.001
(Q6B8Y1) RecName: Full=30S ribosomal protein S10, chloroplastic;... 44 0.001
CP001275_944(CP001275|pid:none) Thermomicrobium roseum DSM 5159,... 44 0.001
CP000943_337(CP000943|pid:none) Methylobacterium sp. 4-46, compl... 44 0.001
(A7H657) RecName: Full=30S ribosomal protein S10; &CP000768_171... 44 0.001
(Q211E7) RecName: Full=30S ribosomal protein S10; &CP000301_341... 44 0.001
(Q16AF5) RecName: Full=30S ribosomal protein S10; &CP000362_130... 44 0.001
CP000975_677(CP000975|pid:none) Methylacidiphilum infernorum V4,... 44 0.001
(Q98N58) RecName: Full=30S ribosomal protein S10; &BA000012_224... 44 0.002
CP001068_3253(CP001068|pid:none) Ralstonia pickettii 12J chromos... 44 0.002
(Q253F2) RecName: Full=30S ribosomal protein S10; &(Q5L6S4) Rec... 44 0.002
(A1W1W1) RecName: Full=30S ribosomal protein S10; &(A8FP22) Rec... 44 0.002
(A7HZK5) RecName: Full=30S ribosomal protein S10; &CP000776_74(... 44 0.002
(Q2L2G3) RecName: Full=30S ribosomal protein S10; &(Q7VTD4) Rec... 44 0.002
(Q8XV11) RecName: Full=30S ribosomal protein S10; &AL646052_301... 44 0.002
(A4YSJ1) RecName: Full=30S ribosomal protein S10; &(A5ELM8) Rec... 44 0.002
CP001001_2185(CP001001|pid:none) Methylobacterium radiotolerans ... 44 0.002
(Q8UE17) RecName: Full=30S ribosomal protein S10; &AE007869_190... 44 0.002
AM746676_843(AM746676|pid:none) Sorangium cellulosum 'So ce 56' ... 44 0.002
(A0L5X2) RecName: Full=30S ribosomal protein S10; &CP000471_836... 44 0.002
(Q0K613) RecName: Full=30S ribosomal protein S10; &(Q1LI31) Rec... 44 0.002
CP000252_300(CP000252|pid:none) Syntrophus aciditrophicus SB, co... 44 0.002
(A6U858) RecName: Full=30S ribosomal protein S10; &(Q92QH1) Rec... 44 0.002
(Q2LQA2) RecName: Full=30S ribosomal protein S10; 44 0.002
(P17009) RecName: Full=Cyanelle 30S ribosomal protein S10; &M35... 44 0.002
(Q4G341) RecName: Full=30S ribosomal protein S10, chloroplastic;... 44 0.002
CP001013_3843(CP001013|pid:none) Leptothrix cholodnii SP-6, comp... 44 0.002
(A5VR07) RecName: Full=30S ribosomal protein S10; &(A6X0B7) Rec... 44 0.002
(A8GVB3) RecName: Full=30S ribosomal protein S10; &(Q1RHM0) Rec... 43 0.003
(Q2W2J0) RecName: Full=30S ribosomal protein S10; &CU459003_378... 43 0.003
(Q2RQV9) RecName: Full=30S ribosomal protein S10; &CP000230_268... 43 0.003
AE009440_566(AE009440|pid:none) Chlamydophila pneumoniae TW-183,... 43 0.003
CP001251_919(CP001251|pid:none) Dictyoglomus turgidum DSM 6724, ... 43 0.003
AM494475_377(AM494475|pid:none) Orientia tsutsugamushi Boryong c... 43 0.003
CP001146_813(CP001146|pid:none) Dictyoglomus thermophilum H-6-12... 43 0.003
CP000777_1871(CP000777|pid:none) Leptospira biflexa serovar Pato... 43 0.003
(Q9Z803) RecName: Full=30S ribosomal protein S10; &A86559(A8655... 43 0.003
AP007255_3131(AP007255|pid:none) Magnetospirillum magneticum AMB... 43 0.003
(B7IHU5) RecName: Full=30S ribosomal protein S10; &CP001185_118... 43 0.003
(Q28UW3) RecName: Full=30S ribosomal protein S10; &CP000264_582... 43 0.004
(A7NR64) RecName: Full=30S ribosomal protein S10; &CP000804_392... 43 0.004
AP008981_1043(AP008981|pid:none) Orientia tsutsugamushi str. Ike... 43 0.004
(Q748Z0) RecName: Full=30S ribosomal protein S10; &AE017180_284... 43 0.004
(Q7VGE5) RecName: Full=30S ribosomal protein S10; &AE017125_137... 43 0.004
(Q82X89) RecName: Full=30S ribosomal protein S10; &AL954747_400... 43 0.004
CP001124_920(CP001124|pid:none) Geobacter bemidjiensis Bem, comp... 42 0.006
CP001390_3589(CP001390|pid:none) Geobacter sp. FRC-32, complete ... 42 0.006
CP000908_2127(CP000908|pid:none) Methylobacterium extorquens PA1... 42 0.006
AM490494_1(AM490494|pid:none) Herbaspirillum seropedicae rpsJ ge... 42 0.006
(Q39Y07) RecName: Full=30S ribosomal protein S10; &CP000148_617... 42 0.006
(A3PGL0) RecName: Full=30S ribosomal protein S10; &(A4WVK9) Rec... 42 0.006
(Q3SLQ0) RecName: Full=30S ribosomal protein S10; &CP000116_404... 42 0.007
(A6LLL2) RecName: Full=30S ribosomal protein S10; &CP000716_931... 42 0.007
(Q04G86) RecName: Full=30S ribosomal protein S10; &CP000411_531... 42 0.007
(A5EX83) RecName: Full=30S ribosomal protein S10; &CP000513_121... 42 0.007
(Q7W2F7) RecName: Full=30S ribosomal protein S10; &BX640423_28(... 42 0.007
(Q6FZC1) RecName: Full=30S ribosomal protein S10; &(Q6G2W4) Rec... 42 0.007
(A5USJ0) RecName: Full=30S ribosomal protein S10; &CP000686_115... 42 0.007
(Q03ZP6) RecName: Full=30S ribosomal protein S10; &CP000414_154... 42 0.007
(A1VIP9) RecName: Full=30S ribosomal protein S10; &(Q12GX2) Rec... 42 0.009
(A4J110) RecName: Full=30S ribosomal protein S10; &CP000612_211... 42 0.009
(A6TWI3) RecName: Full=30S ribosomal protein S10; &CP000724_430... 42 0.009
(P52857) RecName: Full=30S ribosomal protein S10; &CP001357_207... 42 0.009
(A3DJH1) RecName: Full=30S ribosomal protein S10; &CP000568_285... 42 0.009
(Q0ANP9) RecName: Full=30S ribosomal protein S10; &CP000449_179... 42 0.009
AY372455_7(AY372455|pid:none) Uncultured marine alpha proteobact... 41 0.012
(Q6AP72) RecName: Full=30S ribosomal protein S10; &CR522870_112... 41 0.012
CP000269_3412(CP000269|pid:none) Janthinobacterium sp. Marseille... 41 0.012
(B0T2C1) RecName: Full=30S ribosomal protein S10; &(Q9A8V4) Rec... 41 0.012
(P66348) RecName: Full=30S ribosomal protein S10; &(P66349) Rec... 41 0.012
(A2SLF8) RecName: Full=30S ribosomal protein S10; &CP000555_343... 41 0.016
(B5Y988) RecName: Full=30S ribosomal protein S10; &CP001145_963... 41 0.016
(P62653) RecName: Full=30S ribosomal protein S10; &(P80375) Rec... 41 0.016
(Q11HQ1) RecName: Full=30S ribosomal protein S10; &CP000390_166... 40 0.021
(Q0BYB3) RecName: Full=30S ribosomal protein S10; &CP000158_279... 40 0.021
CP000825_1770(CP000825|pid:none) Prochlorococcus marinus str. MI... 40 0.021
(Q046C6) RecName: Full=30S ribosomal protein S10; &(Q74L89) Rec... 40 0.021
(Q3A6P8) RecName: Full=30S ribosomal protein S10; &CP000142_774... 40 0.021
CP001393_1674(CP001393|pid:none) Anaerocellum thermophilum DSM 6... 40 0.021
FM872307_447(FM872307|pid:none) Chlamydia trachomatis B/TZ1A828/... 40 0.021
(A5IM82) RecName: Full=30S ribosomal protein S10; &(P38518) Rec... 40 0.021
(Q3AMT7) RecName: Full=30S ribosomal protein S10; &CP000110_313... 40 0.021
(A5N4P6) RecName: Full=30S ribosomal protein S10; &AP009049_182... 40 0.028
CP001348_747(CP001348|pid:none) Clostridium cellulolyticum H10, ... 40 0.028
(Q8ETY3) RecName: Full=30S ribosomal protein S10; &BA000028_118... 40 0.028
AP008971_154(AP008971|pid:none) Finegoldia magna ATCC 29328 DNA,... 40 0.028
(A4VHM9) RecName: Full=30S ribosomal protein S10; &(A5VXP6) Rec... 40 0.028
CP001503_247(CP001503|pid:none) Burkholderia glumae BGR1 chromos... 40 0.028
(Q38UR1) RecName: Full=30S ribosomal protein S10; &CR936503_176... 40 0.028
(B0TM13) RecName: Full=30S ribosomal protein S10; &CP000931_409... 40 0.028
(A0PXU5) RecName: Full=30S ribosomal protein S10; &CP000382_224... 40 0.028
EF677170_1(EF677170|pid:none) Picea sitchensis clone WS02762_P15... 40 0.028
(Q0ID60) RecName: Full=30S ribosomal protein S10; &(Q7VA06) Rec... 40 0.028
(A0K3M4) RecName: Full=30S ribosomal protein S10; &(A1V8A4) Rec... 40 0.028
(P10129) RecName: Full=30S ribosomal protein S10; &CP000123_661... 40 0.028
(A6UZI7) RecName: Full=30S ribosomal protein S10; &(B7V643) Rec... 40 0.036
(Q7NEF1) RecName: Full=30S ribosomal protein S10; &BA000045_392... 40 0.036
(Q4FLL7) RecName: Full=30S ribosomal protein S10; &CP000084_109... 40 0.036
(A8G1E9) RecName: Full=30S ribosomal protein S10; &(A8GYX5) Rec... 40 0.036
AP008955_220(AP008955|pid:none) Brevibacillus brevis NBRC 100599... 40 0.036
(A4IJI8) RecName: Full=30S ribosomal protein S10; &(Q5L3Z8) Rec... 39 0.047
AP008937_1516(AP008937|pid:none) Lactobacillus fermentum IFO 395... 39 0.047
AY835405_1(AY835405|pid:none) Brassica napus clone BnY2H141 30S ... 39 0.047
(A0KRM3) RecName: Full=30S ribosomal protein S10; &(A3Q981) Rec... 39 0.047
(Q88XY7) RecName: Full=30S ribosomal protein S10; &AL935254_244... 39 0.047
CP000075_4548(CP000075|pid:none) Pseudomonas syringae pv. syring... 39 0.047
(Q9LK61) RecName: Full=30S ribosomal protein S10, chloroplastic;... 39 0.047
(Q1WS89) RecName: Full=30S ribosomal protein S10; &CP000233_141... 39 0.047
(Q73PN2) RecName: Full=30S ribosomal protein S10; &AE017226_759... 39 0.047
CP000916_992(CP000916|pid:none) Thermotoga neapolitana DSM 4359,... 39 0.047
CP000058_4395(CP000058|pid:none) Pseudomonas syringae pv. phaseo... 39 0.047
CP000878_1631(CP000878|pid:none) Prochlorococcus marinus str. MI... 39 0.061
(A5VLK6) RecName: Full=30S ribosomal protein S10; &(B2G8X9) Rec... 39 0.061
(B5Z8W8) RecName: Full=30S ribosomal protein S10; &(P66328) Rec... 39 0.061
CP001638_108(CP001638|pid:none) Geobacillus sp. WCH70, complete ... 39 0.061
(A2BT82) RecName: Full=30S ribosomal protein S10; &(A3PEZ6) Rec... 39 0.061
CP001098_114(CP001098|pid:none) Halothermothrix orenii H 168, co... 39 0.061
CP001010_46(CP001010|pid:none) Polynucleobacter necessarius subs... 39 0.080
CP001050_2432(CP001050|pid:none) Neisseria gonorrhoeae NCCP11945... 39 0.080
(Q48D35) RecName: Full=30S ribosomal protein S10; &(Q4ZMP3) Rec... 39 0.080
AY657186_1(AY657186|pid:none) Synthetic construct Peudomonas aer... 39 0.080
(A6W393) RecName: Full=30S ribosomal protein S10; &CP000749_422... 39 0.080
(Q1R0H6) RecName: Full=30S ribosomal protein S10; &CP000285_417... 39 0.080
(Q318N6) RecName: Full=30S ribosomal protein S10; &CP000111_175... 39 0.080
(A1KRH2) RecName: Full=30S ribosomal protein S10; &AM421808_122... 38 0.10
(A9M3W8) RecName: Full=30S ribosomal protein S10; &(P66332) Rec... 38 0.10
(O21246) RecName: Full=Ribosomal protein S10, mitochondrial; &A... 38 0.10
CP000923_844(CP000923|pid:none) Thermoanaerobacter sp. X514, com... 38 0.10
(A9WH65) RecName: Full=30S ribosomal protein S10; &CP000909_231... 38 0.10
(Q73F97) RecName: Full=30S ribosomal protein S10; &AE017194_109... 38 0.10
CP000733_1683(CP000733|pid:none) Coxiella burnetii Dugway 5J108-... 38 0.10
(Q03EB5) RecName: Full=30S ribosomal protein S10; &CP000422_134... 38 0.10
CP001230_1170(CP001230|pid:none) Persephonella marina EX-H1, com... 38 0.10
(Q2RFP6) RecName: Full=30S ribosomal protein S10; &CP000232_240... 38 0.10
(Q01W91) RecName: Full=30S ribosomal protein S10; &CP000473_505... 38 0.10
CP000448_2266(CP000448|pid:none) Syntrophomonas wolfei subsp. wo... 38 0.10
(Q2GL60) RecName: Full=30S ribosomal protein S10; &CP000235_252... 38 0.14
CP001472_1385(CP001472|pid:none) Acidobacterium capsulatum ATCC ... 38 0.14
(Q7U4D0) RecName: Full=30S ribosomal protein S10; &BX569694_323... 38 0.14
CP001114_2088(CP001114|pid:none) Deinococcus deserti VCD115, com... 38 0.14
CP000896_68(CP000896|pid:none) Acholeplasma laidlawii PG-8A, com... 38 0.14
CP001344_501(CP001344|pid:none) Cyanothece sp. PCC 7425, complet... 38 0.14
(A9VP76) RecName: Full=30S ribosomal protein S10; &(B7IT18) Rec... 38 0.14
(P51286) RecName: Full=30S ribosomal protein S10, chloroplastic;... 38 0.14
AY198133_20(AY198133|pid:none) Spiroplasma kunkelii strain CR2-3... 38 0.14
(B6JNF8) RecName: Full=30S ribosomal protein S10; &CP001217_127... 38 0.14
(Q5FFT9) RecName: Full=30S ribosomal protein S10; &CR925677_630... 38 0.14
(O52331) RecName: Full=30S ribosomal protein S10; 37 0.18
(A5D5I9) RecName: Full=30S ribosomal protein S10; &AP009389_319... 37 0.18
(Q1AU28) RecName: Full=30S ribosomal protein S10; &CP000386_211... 37 0.18
(Q5WLR3) RecName: Full=30S ribosomal protein S10; &AP006627_149... 37 0.18
(A5IHR5) RecName: Full=30S ribosomal protein S10; &(Q5WZL3) Rec... 37 0.18
AE015450_50(AE015450|pid:none) Mycoplasma gallisepticum strain R... 37 0.18
AF036708_2(AF036708|pid:none) Mycoplasma gallisepticum strain A5... 37 0.18
CP000806_4083(CP000806|pid:none) Cyanothece sp. ATCC 51142 circu... 37 0.18
CU469464_340(CU469464|pid:none) Candidatus Phytoplasma mali stra... 37 0.18
(A0ALW9) RecName: Full=30S ribosomal protein S10; &(P66330) Rec... 37 0.23
AM454065_1(AM454065|pid:none) Vitis vinifera contig VV78X087596.... 37 0.23
(Q6F1Z5) RecName: Full=30S ribosomal protein S10; &AE017263_122... 37 0.23
(Q2JUX3) RecName: Full=30S ribosomal protein S10; &CP000239_123... 37 0.23
(A2CC89) RecName: Full=30S ribosomal protein S10; &(Q7V4Z9) Rec... 37 0.23
CP001047_333(CP001047|pid:none) Mycoplasma arthritidis 158L3-1, ... 37 0.30
(O83218) RecName: Full=30S ribosomal protein S10; &AE000520_186... 37 0.30
(P47396) RecName: Full=30S ribosomal protein S10; &CP000925_153... 37 0.30
AM778948_108(AM778948|pid:none) Microcystis aeruginosa PCC 7806 ... 37 0.30
CP001287_1481(CP001287|pid:none) Cyanothece sp. PCC 8801, comple... 37 0.30
(B2A4D8) RecName: Full=30S ribosomal protein S10; &CP001034_193... 37 0.30
(P75581) RecName: Full=30S ribosomal protein S10; &S73993(S7399... 37 0.30
EU301781_1(EU301781|pid:none) Daucus carota chloroplast 30S ribo... 37 0.30
CP001101_2212(CP001101|pid:none) Chlorobium phaeobacteroides BS1... 36 0.40
(A3CK62) RecName: Full=30S ribosomal protein S10; &(A8AZM6) Rec... 36 0.40
U43929_1(U43929|pid:none) Bacillus subtilis ribosomal protein ge... 36 0.40
(B1YGU9) RecName: Full=30S ribosomal protein S10; &CP001022_94(... 36 0.40
(B1AIL9) RecName: Full=30S ribosomal protein S10; &(Q9PQR1) Rec... 36 0.40
CP001634_1855(CP001634|pid:none) Kosmotoga olearia TBF 19.5.1, c... 36 0.40
(B0JSD9) RecName: Full=30S ribosomal protein S10; &AP009552_427... 36 0.40
(Q1XDK2) RecName: Full=30S ribosomal protein S10, chloroplastic;... 36 0.52
(Q3Z982) RecName: Full=30S ribosomal protein S10; &CP000027_462... 36 0.52
(A0T0K7) RecName: Full=30S ribosomal protein S10, chloroplastic;... 36 0.52
CP001229_1711(CP001229|pid:none) Sulfurihydrogenibium azorense A... 36 0.52
GQ231541_53(GQ231541|pid:none) Aureococcus anophagefferens strai... 36 0.52
(Q54WA4) RecName: Full=Probable 28S ribosomal protein S10, mitoc... 36 0.52
(A9KJJ5) RecName: Full=30S ribosomal protein S10; &CP000885_362... 35 0.68
AM422018_587(AM422018|pid:none) Candidatus Phytoplasma australie... 35 0.68
CP000407_68(CP000407|pid:none) Streptococcus suis 05ZYH33, compl... 35 0.68
(P66339) RecName: Full=30S ribosomal protein S10; &(P66340) Rec... 35 0.68
(A1A068) RecName: Full=30S ribosomal protein S10; &AP009256_320... 35 0.68
(A0T101) RecName: Full=30S ribosomal protein S10, chloroplastic;... 35 0.68
(Q7UN22) RecName: Full=30S ribosomal protein S10; &BX294146_285... 35 0.68
CP001325_317(CP001325|pid:none) Micromonas sp. RCC299 chromosome... 35 0.68
(A5FRY8) RecName: Full=30S ribosomal protein S10; &(Q3ZZM5) Rec... 35 0.68
(A1BJ35) RecName: Full=30S ribosomal protein S10; &CP000492_233... 35 0.88
(B4U743) RecName: Full=30S ribosomal protein S10; &CP001130_262... 35 0.88
AM180355_3375(AM180355|pid:none) Clostridium difficile 630 compl... 35 0.88
(A4XBP7) RecName: Full=30S ribosomal protein S10; &(A8M530) Rec... 35 0.88
CP000866_1715(CP000866|pid:none) Nitrosopumilus maritimus SCM1, ... 35 0.88
(Q1JE60) RecName: Full=30S ribosomal protein S10; &(Q1JP18) Rec... 35 0.88
(Q2S3R5) RecName: Full=30S ribosomal protein S10; &CP000159_100... 35 0.88
(B0CCC9) RecName: Full=30S ribosomal protein S10; &CP000828_172... 35 0.88
(Q118Z1) RecName: Full=30S ribosomal protein S10; &CP000393_403... 35 1.2
(A6LPR0) RecName: Full=30S ribosomal protein S10; &CP000721_150... 35 1.2
AP009484_194(AP009484|pid:none) Macrococcus caseolyticus JCSC540... 35 1.2
AM295250_1727(AM295250|pid:none) Staphylococcus carnosus subsp. ... 34 1.5
(Q31PV6) RecName: Full=30S ribosomal protein S10; &(Q5N4C2) Rec... 34 1.5
CP001099_174(CP001099|pid:none) Chlorobaculum parvum NCIB 8327, ... 34 1.5
(Q6A6M5) RecName: Full=30S ribosomal protein S10; &AE017283_182... 34 1.5
EU499356_1(EU499356|pid:none) Neisseria gonorrhoeae strain G45 3... 34 1.5
(Q18CF6) RecName: Full=30S ribosomal protein S10; &AM180355_73(... 34 1.5
(Q2JMX6) RecName: Full=30S ribosomal protein S10; &CP000240_898... 34 1.5
(A4SCQ8) RecName: Full=30S ribosomal protein S10; &CP000607_238... 34 1.5
(Q8G418) RecName: Full=30S ribosomal protein S10; &AE014295_149... 34 1.5
AM269993_2(AM269993|pid:none) Aspergillus niger contig An01c0470... 34 1.5
(Q47JA4) RecName: Full=30S ribosomal protein S10; &CP000089_318... 34 2.0
CP001213_357(CP001213|pid:none) Bifidobacterium animalis subsp. ... 34 2.0
CP001097_2146(CP001097|pid:none) Chlorobium limicola DSM 245, co... 34 2.0
EU499357_1(EU499357|pid:none) Neisseria gonorrhoeae strain G156 ... 34 2.0
CP001110_262(CP001110|pid:none) Pelodictyon phaeoclathratiforme ... 33 2.6
(Q83FY5) RecName: Full=30S ribosomal protein S10; &(Q83I79) Rec... 33 2.6
BX927149_171(BX927149|pid:none) Corynebacterium glutamicum ATCC ... 33 2.6
BA000035_521(BA000035|pid:none) Corynebacterium efficiens YS-314... 33 2.6
(Q3APH2) RecName: Full=30S ribosomal protein S10; &CP000108_182... 33 2.6
(A5IV35) RecName: Full=30S ribosomal protein S10; &(A6QJ93) Rec... 33 2.6
(Q5M2B2) RecName: Full=30S ribosomal protein S10; &CP000023_180... 33 3.4
CP001100_1079(CP001100|pid:none) Chloroherpeton thalassium ATCC ... 33 3.4
(Q6YR19) RecName: Full=30S ribosomal protein S10; &AP006628_199... 33 3.4
FM864216_123(FM864216|pid:none) Mycoplasma conjunctivae HRC/581T... 33 3.4
(Q4L8B5) RecName: Full=30S ribosomal protein S10; &AP006716_801... 33 3.4
CU694391_152(CU694391|pid:none) Ralstonia solanacearum strain Mo... 33 3.4
(Q6ACZ4) RecName: Full=30S ribosomal protein S10; &AE016822_164... 33 3.4
(A4FPM6) RecName: Full=30S ribosomal protein S10; &AM420293_664... 33 3.4
(Q4JT46) RecName: Full=30S ribosomal protein S10; &CR931997_183... 33 3.4
(Q0RRS2) RecName: Full=30S ribosomal protein S10; &(Q2JFH7) Rec... 33 3.4
(P49498) RecName: Full=30S ribosomal protein S10, chloroplastic;... 33 4.4
CP000678_501(CP000678|pid:none) Methanobrevibacter smithii ATCC ... 33 4.4
(A5CUB4) RecName: Full=30S ribosomal protein S10; &(B0RB38) Rec... 33 4.4
EF508371_136(EF508371|pid:none) Rhodomonas salina strain CCMP131... 33 4.4
AM946015_65(AM946015|pid:none) Streptococcus uberis 0140J comple... 33 4.4
(A0LRL9) RecName: Full=30S ribosomal protein S10; &CP000481_303... 33 4.4
Z70309_12(Z70309|pid:none) Caenorhabditis elegans Cosmid R102, c... 33 4.5
(Q73H86) RecName: Full=30S ribosomal protein S10; &AE017196_611... 32 5.7
(O66430) RecName: Full=30S ribosomal protein S10; &AE000657_3(A... 32 5.7
AP009608_823(AP009608|pid:none) Mycoplasma fermentans PG18 DNA, ... 32 5.7
AL590442_66(AL590442|pid:none) chromosome II of strain GB-M1 of ... 32 7.5
AL023287_11(AL023287|pid:none) S.pombe chromosome II cosmid c23E... 32 7.5
(O60186) RecName: Full=40S ribosomal protein S10, mitochondrial;... 32 7.5
(P30765) RecName: Full=30S ribosomal protein S10; &AL583923_208... 32 7.5
CP001391_430(CP001391|pid:none) Wolbachia sp. wRi, complete geno... 32 7.5
CP001620_1759(CP001620|pid:none) Corynebacterium kroppenstedtii ... 32 9.8
CP001052_1153(CP001052|pid:none) Burkholderia phytofirmans PsJN ... 32 9.8
(Q8DI41) RecName: Full=30S ribosomal protein S10; &BA000039_175... 32 9.8
EF144630_1(EF144630|pid:none) Populus trichocarpa clone WS01116_... 32 9.8
(A6GZA0) RecName: Full=30S ribosomal protein S10; &AM398681_130... 32 9.8

>(Q54Y41) RecName: Full=40S ribosomal protein S20;
Length = 124

Score = 217 bits (553), Expect(2) = 5e-57
Identities = 109/109 (100%), Positives = 109/109 (100%)
Frame = +2

Query: 41 MSMNPIKKTEETVAAPAVNKISITLTSRNPKSLEKVCADIITLAKNKKVKAKGPIRIPNK 220
MSMNPIKKTEETVAAPAVNKISITLTSRNPKSLEKVCADIITLAKNKKVKAKGPIRIPNK
Sbjct: 1 MSMNPIKKTEETVAAPAVNKISITLTSRNPKSLEKVCADIITLAKNKKVKAKGPIRIPNK 60

Query: 221 VLKITTRKSPCGEGTNTWDRFEMRIHKRVIHILSTQDFVKEMNTISIEA 367
VLKITTRKSPCGEGTNTWDRFEMRIHKRVIHILSTQDFVKEMNTISIEA
Sbjct: 61 VLKITTRKSPCGEGTNTWDRFEMRIHKRVIHILSTQDFVKEMNTISIEA 109

Score = 26.2 bits (56), Expect(2) = 5e-57
Identities = 11/14 (78%), Positives = 13/14 (92%)
Frame = +3

Query: 369 GVDVEVIMDKKRSQ 410
GVDVEVIMDKK ++
Sbjct: 110 GVDVEVIMDKKEAK 123

Lambda K H
0.318 0.134 0.401

Gapped
Lambda K H
0.267 0.0410 0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3236559
Number of Hits to DB: 747,365,423
Number of extensions: 14447172
Number of successful extensions: 55749
Number of sequences better than 10.0: 399
Number of HSP's gapped: 55586
Number of HSP's successfully gapped: 400
Length of query: 161
Length of database: 1,051,180,864
Length adjustment: 118
Effective length of query: 43
Effective length of database: 669,266,902
Effective search space: 28778476786
Effective search space used: 28778476786
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 30 (16.2 bits)

PSORT

psg: 0.67 gvh: 0.32 alm: 0.51 top: 0.53 tms: 0.00 mit: 0.21 mip: 0.00
nuc: 0.00 erl: 0.00 erm: 0.00 pox: 0.00 px2: 0.00 vac: 0.00 rnp: 0.00
act: 0.00 caa: 0.00 yqr: 0.00 tyr: 0.00 leu: 0.00 gpi: 0.00 myr: 0.00
dna: 0.00 rib: 0.00 bac: 0.00 m1a: 0.00 m1b: 0.00 m2 : 0.00 mNt: 0.00
m3a: 0.00 m3b: 0.00 m_ : 1.00

36.0 %: nuclear
32.0 %: cytoplasmic
20.0 %: mitochondrial
12.0 %: cytoskeletal

>> prediction for Contig-U14495-1 is nuc

VS (DIR, S) 14
VH (FL, L) 0
VF (FL, S) 1
AH (FL, L) 0
AF (FL, S) 0
SL (DIR, L) 0
SS (DIR, S) 1
SH (FL, L) 1
SF (FL, S) 0
CH (FL, L) 0
CF (FL, S) 0
FCL (DIR, L) 0
FC (DIR, S) 1
FC-IC (SUB) 1