Contig-U02677-1
Contig ID Contig-U02677-1
Contig update 2001. 8.29
Contig sequence
>Contig-U02677-1 (Contig-U02677-1Q) /CSM_Contig/Contig-U02677-1Q.Seq.d
ACTGTTGGCCTACTGGTAAAGTGGACTTTTCGCTAAAATTTGCTTTTTTT
GTTTTTACATAATATTTTTTATTTCATTTCATTTTCATTTTCATTTTCAA
AAAAAAAATAAATATAAATAAAAATCAAAATAAAAATGATTAGATTATTT
TCAAAATCTACTTTTTTTAATGGAATTAATTTCACAAAATCTATTTCATC
ACCTTCAGTTAGATATATTTCAAATAATAGTCCAACATCTGAATCACCAA
AGATACTAGAATACAAAAGAACTAGGGATCAAGTAATAAATGCACATAAT
GAAAAATTTAGATTTTCAATTATTAATTTAACCAAAGCAGCAAATATTTC
AAAAACAAAACATAATCTATCAATTTCAGATGCTCAATTATTAGGTAAAT
TAATGTCTGGTGTTTCAATGTGTGCTTCATTTTTATCTGATGAAGAAAGA
ATCTCTGCTCAAATTATTTCTGATATTAATCCAACTCATATATATGCAGA
AGCAATTCATGTTGGAGAAGTTAGAGGATTTTTAATTAATGGTGATACAC
CAAGATTGGAGACACCTGATCAAGTTATAAATAGAAAAGGTATTTTCCAA
TTTTCAAAGATATTATATGGTCATTTAAAACCAATTCAAAGTGTTGTAGC
TGTAGAGGAAAAAGATTTAACAATAACAAAAGAATTTCAACATTATTTTG
ATCAATCTGAACAAATTCCATCATTTATTCAATTAGAAACTAGATTAAAA
TCCAAATAATAATAATAGTAAAAGTGATAACAATAATATTGTTATTAATG
ATGAAATTCAACAACAAATTCAAATACAAGAACAACAAGGACAAGGACAA
GGACAAGGACAAGGACAACAAATTATAAATAGTAATAATGATGTAATTGA
TAATGATCAATTAGAATTTAATGGTGGTATTTTAATTCAAACATTACCAT
CAACGACTGATGAAGAATTGGTTCAATTGAAAAATAATATTGAAAAGCAT
TCAATTGCAGATTTATTTTTAAAAGAAAAGAAATCAATCAAAGAGATATT
ATCAATCCTTACAAATAATGATCCATCAGTTGAGATTATTTCAACCATTT
TCGTAGATTTCTATTGTCGTTGTACTTTGAAAACTTTTAAAGATAAAATT
CTAACTTTAGGCATCAACGAAATTAAACATCTTGAAGAACATAATCATAA
TGAATTAAAATGTATCTATTGTAATCGTTATCATTATTTAAAGGATACTG
ATTTCAAAGAAATGATTAATCATTTAGAACAAGATAAAGAACAAAAATTA
AAAGTTTTAAAAGAAATGGAACAAGAACAAGAACAAGAAGTGCAACAACA
AAATAATCATACTGAAAAAATAAATGATGAAACTAAAAAAGAATAAATTA
AAAATACTAAAATTAATGTAAAAAAAAAAAAA

Gap no gap
Contig length 1432
Chromosome number (1..6, M) 2
Chromosome length 8467578
Start point 7292492
End point 7293909
Strand (PLUS/MINUS) PLUS
Number of clones 10
Number of EST 19
Link to clone list U02677
List of clone(s)

est1=AFI115F,1,621
est2=AFI707F,32,515
est3=AFJ708F,76,665
est4=SFD513F,87,611
est5=SFD850F,92,467
est6=SFE428F,94,401
est7=AFG478F,113,760
est8=SFC759F,113,370
est9=CFG645F,148,673
est10=AFI707Z,654,1414
est11=SFD513Z,677,1374
est12=AFI115Z,696,1397
est13=SFC759Z,719,1433
est14=SFE428Z,743,1360
est15=AFG478Z,824,1432
est16=AFJ708Z,844,1430
est17=SFD850Z,850,1433
est18=CFG645Z,870,1391
est19=CFA651Z,880,1431
Translated Amino Acid sequence
llayw*sglfakicffcfyiiffisfhfhfhfqkknkyk*ksk*k*ldyfqnllflmeli
sqnlfhhlqldifqiivqhlnhqry*ntkelgik**mhimknldfqlli*pkqqifqkqn
iiyqfqmlny*vn*clvfqcvlhfylmkkesllklfliliqliymqkqfmlekledf*lm
vihqdwrhlikl*iekvfsnfqryymvi*nqfkvl*l*rkki*q*qknfniilinlnkfh
hlfn*kld*NPNNNNSKSDNNNIVINDEIQQQIQIQEQQGQGQGQGQGQQIINSNNDVID
NDQLEFNGGILIQTLPSTTDEELVQLKNNIEKHSIADLFLKEKKSIKEILSILTNNDPSV
EIISTIFVDFYCRCTLKTFKDKILTLGINEIKHLEEHNHNELKCIYCNRYHYLKDTDFKE
MINHLEQDKEQKLKVLKEMEQEQEQEVQQQNNHTEKINDETKKE*ikntkinvkkkk


Translated Amino Acid sequence (All Frames)
Frame A:
tvgllvkwtfr*nllflflhnifyfisfsfsfskkk*i*ikikikmirlfskstffngin
ftksisspsvryisnnsptsespkileykrtrdqvinahnekfrfsiinltkaanisktk
hnlsisdaqllgklmsgvsmcasflsdeerisaqiisdinpthiyaeaihvgevrgflin
gdtprletpdqvinrkgifqfskilyghlkpiqsvvaveekdltitkefqhyfdqseqip
sfiqletrlksk*****k**q*ycy***nsttnsntrttrtrtrtrtrttnyk****cn*
**siri*wwyfnsnitind**rigsiek*y*kafncrfifkrkeinqrdiinpyk**sis
*dyfnhfrrfllslyfenf*r*nsnfrhqrn*ts*rt*s**ikmyll*slslfkgy*fqr
nd*sfrtr*rtkiksfkrngtrtrtrsattk*sy*knk**n*krin*ky*n*ckkkk


Frame B:
llayw*sglfakicffcfyiiffisfhfhfhfqkknkyk*ksk*k*ldyfqnllflmeli
sqnlfhhlqldifqiivqhlnhqry*ntkelgik**mhimknldfqlli*pkqqifqkqn
iiyqfqmlny*vn*clvfqcvlhfylmkkesllklfliliqliymqkqfmlekledf*lm
vihqdwrhlikl*iekvfsnfqryymvi*nqfkvl*l*rkki*q*qknfniilinlnkfh
hlfn*kld*NPNNNNSKSDNNNIVINDEIQQQIQIQEQQGQGQGQGQGQQIINSNNDVID
NDQLEFNGGILIQTLPSTTDEELVQLKNNIEKHSIADLFLKEKKSIKEILSILTNNDPSV
EIISTIFVDFYCRCTLKTFKDKILTLGINEIKHLEEHNHNELKCIYCNRYHYLKDTDFKE
MINHLEQDKEQKLKVLKEMEQEQEQEVQQQNNHTEKINDETKKE*ikntkinvkkkk


Frame C:
cwptgkvdfslkfaffvft*yflfhfifififkkkininknqnknd*iifkiyff*wn*f
hkiyfitfs*iyfk**sni*itkdtriqkn*gssnkct**ki*ifny*fnqsskyfknkt
*sinfrcsiir*invwcfnvcfifi**rknlcsnyf*y*snsyicrsnscwrs*rifn*w
*ytkigdt*ssyk*kryfpifkdiiwsfktnskccscrgkrfnnnkristlf*si*tnsi
iysirn*ikiqiiiivkvitiilllmmkfnnkfkyknnkdkdkdkdkdnkl*ivimm*li
min*nlmvvf*fkhyhqrlmknwfn*kiilksiqlqiyf*kkrnqskryyqslqimihql
rlfqpfs*isivvvl*kllkikf*l*astklnilkniiimn*nvsiviviii*riliskk
*lii*nkiknkn*kf*kkwnknknkkcnnkiiilkk*mmklkknklkilklm*kkk


own update 2004. 6. 9
Homology vs CSM-cDNA
Query= Contig-U02677-1 (Contig-U02677-1Q)
/CSM_Contig/Contig-U02677-1Q.Seq.d
(1432 letters)

Database: CSM
6905 sequences; 5,674,871 total letters


Score E
Sequences producing significant alignments: (bits) Value

Contig-U02677-1 (Contig-U02677-1Q) /CSM_Contig/Conti... 1289 0.0
Contig-U09227-1 (Contig-U09227-1Q) /CSM_Contig/Conti... 48 3e-05
Contig-U12746-1 (Contig-U12746-1Q) /CSM_Contig/Conti... 44 4e-04
Contig-U12521-1 (Contig-U12521-1Q) /CSM_Contig/Conti... 44 4e-04
Contig-U09810-1 (Contig-U09810-1Q) /CSM_Contig/Conti... 44 4e-04
Contig-U09374-1 (Contig-U09374-1Q) /CSM_Contig/Conti... 44 4e-04
Contig-U07093-1 (Contig-U07093-1Q) /CSM_Contig/Conti... 44 4e-04
Contig-U05176-1 (Contig-U05176-1Q) /CSM_Contig/Conti... 44 4e-04
Contig-U04608-1 (Contig-U04608-1Q) /CSM_Contig/Conti... 44 4e-04
Contig-U14276-1 (Contig-U14276-1Q) /CSM_Contig/Conti... 42 0.002

>Contig-U02677-1 (Contig-U02677-1Q) /CSM_Contig/Contig-U02677-1Q.Seq.d
Length = 1432

Score = 1289 bits (650), Expect = 0.0
Identities = 664/671 (98%)
Strand = Plus / Plus


Query: 137 tgattagattattttcaaaatctacnnnnnnnaatggaattaatttcacaaaatctattt 196
||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 137 tgattagattattttcaaaatctactttttttaatggaattaatttcacaaaatctattt 196


Query: 197 catcaccttcagttagatatatttcaaataatagtccaacatctgaatcaccaaagatac 256
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 197 catcaccttcagttagatatatttcaaataatagtccaacatctgaatcaccaaagatac 256


Query: 257 tagaatacaaaagaactagggatcaagtaataaatgcacataatgaaaaatttagatttt 316
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 257 tagaatacaaaagaactagggatcaagtaataaatgcacataatgaaaaatttagatttt 316


Query: 317 caattattaatttaaccaaagcagcaaatatttcaaaaacaaaacataatctatcaattt 376
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 317 caattattaatttaaccaaagcagcaaatatttcaaaaacaaaacataatctatcaattt 376


Query: 377 cagatgctcaattattaggtaaattaatgtctggtgtttcaatgtgtgcttcatttttat 436
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 377 cagatgctcaattattaggtaaattaatgtctggtgtttcaatgtgtgcttcatttttat 436


Query: 437 ctgatgaagaaagaatctctgctcaaattatttctgatattaatccaactcatatatatg 496
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 437 ctgatgaagaaagaatctctgctcaaattatttctgatattaatccaactcatatatatg 496


Query: 497 cagaagcaattcatgttggagaagttagaggatttttaattaatggtgatacaccaagat 556
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 497 cagaagcaattcatgttggagaagttagaggatttttaattaatggtgatacaccaagat 556


Query: 557 tggagacacctgatcaagttataaatagaaaaggtattttccaattttcaaagatattat 616
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 557 tggagacacctgatcaagttataaatagaaaaggtattttccaattttcaaagatattat 616


Query: 617 atggtcatttaaaaccaattcaaagtgttgtagctgtagaggaaaaagatttaacaataa 676
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 617 atggtcatttaaaaccaattcaaagtgttgtagctgtagaggaaaaagatttaacaataa 676


Query: 677 caaaagaatttcaacattattttgatcaatctgaacaaattccatcatttattcaattag 736
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 677 caaaagaatttcaacattattttgatcaatctgaacaaattccatcatttattcaattag 736


Query: 737 aaactagattaaaatccaaataataataatagtaaaagtgataacaataatattgttatt 796
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 737 aaactagattaaaatccaaataataataatagtaaaagtgataacaataatattgttatt 796


Query: 797 aatgatgaaat 807
|||||||||||
Sbjct: 797 aatgatgaaat 807


Score = 977 bits (493), Expect = 0.0
Identities = 493/493 (100%)
Strand = Plus / Plus


Query: 872 attataaatagtaataatgatgtaattgataatgatcaattagaatttaatggtggtatt 931
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 872 attataaatagtaataatgatgtaattgataatgatcaattagaatttaatggtggtatt 931


Query: 932 ttaattcaaacattaccatcaacgactgatgaagaattggttcaattgaaaaataatatt 991
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 932 ttaattcaaacattaccatcaacgactgatgaagaattggttcaattgaaaaataatatt 991


Query: 992 gaaaagcattcaattgcagatttatttttaaaagaaaagaaatcaatcaaagagatatta 1051
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 992 gaaaagcattcaattgcagatttatttttaaaagaaaagaaatcaatcaaagagatatta 1051


Query: 1052 tcaatccttacaaataatgatccatcagttgagattatttcaaccattttcgtagatttc 1111
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1052 tcaatccttacaaataatgatccatcagttgagattatttcaaccattttcgtagatttc 1111


Query: 1112 tattgtcgttgtactttgaaaacttttaaagataaaattctaactttaggcatcaacgaa 1171
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1112 tattgtcgttgtactttgaaaacttttaaagataaaattctaactttaggcatcaacgaa 1171


Query: 1172 attaaacatcttgaagaacataatcataatgaattaaaatgtatctattgtaatcgttat 1231
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1172 attaaacatcttgaagaacataatcataatgaattaaaatgtatctattgtaatcgttat 1231


Query: 1232 cattatttaaaggatactgatttcaaagaaatgattaatcatttagaacaagataaagaa 1291
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1232 cattatttaaaggatactgatttcaaagaaatgattaatcatttagaacaagataaagaa 1291


Query: 1292 caaaaattaaaagttttaaaagaaatggaacaagaacaagaacaagaagtgcaacaacaa 1351
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1292 caaaaattaaaagttttaaaagaaatggaacaagaacaagaacaagaagtgcaacaacaa 1351


Query: 1352 aataatcatactg 1364
|||||||||||||
Sbjct: 1352 aataatcatactg 1364


Score = 73.8 bits (37), Expect = 5e-13
Identities = 37/37 (100%)
Strand = Plus / Plus


Query: 1 actgttggcctactggtaaagtggacttttcgctaaa 37
|||||||||||||||||||||||||||||||||||||
Sbjct: 1 actgttggcctactggtaaagtggacttttcgctaaa 37


Score = 32.2 bits (16), Expect = 1.6
Identities = 16/16 (100%)
Strand = Plus / Minus


Query: 1260 aaatgattaatcattt 1275
||||||||||||||||
Sbjct: 1275 aaatgattaatcattt 1260


>Contig-U09227-1 (Contig-U09227-1Q) /CSM_Contig/Contig-U09227-1Q.Seq.d
Length = 1017

Score = 48.1 bits (24), Expect = 3e-05
Identities = 33/36 (91%)
Strand = Plus / Plus


Query: 755 aataataataatagtaaaagtgataacaataatatt 790
||||||||||||||||| ||| |||| |||||||||
Sbjct: 629 aataataataatagtaatagtaataataataatatt 664


Score = 30.2 bits (15), Expect = 6.3
Identities = 30/35 (85%)
Strand = Plus / Plus


Query: 754 aaataataataatagtaaaagtgataacaataata 788
|||||||||||||| ||| | | |||| |||||||
Sbjct: 973 aaataataataataataataataataataataata 1007


>Contig-U12746-1 (Contig-U12746-1Q) /CSM_Contig/Contig-U12746-1Q.Seq.d
Length = 642

Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus


Query: 1319 gaacaagaacaagaacaagaag 1340
||||||||||||||||||||||
Sbjct: 63 gaacaagaacaagaacaagaag 84


Score = 42.1 bits (21), Expect = 0.002
Identities = 21/21 (100%)
Strand = Plus / Plus


Query: 1319 gaacaagaacaagaacaagaa 1339
|||||||||||||||||||||
Sbjct: 27 gaacaagaacaagaacaagaa 47


Score = 42.1 bits (21), Expect = 0.002
Identities = 21/21 (100%)
Strand = Plus / Plus


Query: 1319 gaacaagaacaagaacaagaa 1339
|||||||||||||||||||||
Sbjct: 57 gaacaagaacaagaacaagaa 77


Score = 42.1 bits (21), Expect = 0.002
Identities = 21/21 (100%)
Strand = Plus / Plus


Query: 1319 gaacaagaacaagaacaagaa 1339
|||||||||||||||||||||
Sbjct: 45 gaacaagaacaagaacaagaa 65


Score = 42.1 bits (21), Expect = 0.002
Identities = 21/21 (100%)
Strand = Plus / Plus


Query: 1319 gaacaagaacaagaacaagaa 1339
|||||||||||||||||||||
Sbjct: 51 gaacaagaacaagaacaagaa 71


Score = 42.1 bits (21), Expect = 0.002
Identities = 21/21 (100%)
Strand = Plus / Plus


Query: 1319 gaacaagaacaagaacaagaa 1339
|||||||||||||||||||||
Sbjct: 33 gaacaagaacaagaacaagaa 53


Score = 42.1 bits (21), Expect = 0.002
Identities = 21/21 (100%)
Strand = Plus / Plus


Query: 1319 gaacaagaacaagaacaagaa 1339
|||||||||||||||||||||
Sbjct: 39 gaacaagaacaagaacaagaa 59


Score = 42.1 bits (21), Expect = 0.002
Identities = 21/21 (100%)
Strand = Plus / Plus


Query: 1319 gaacaagaacaagaacaagaa 1339
|||||||||||||||||||||
Sbjct: 21 gaacaagaacaagaacaagaa 41


Score = 34.2 bits (17), Expect = 0.40
Identities = 17/17 (100%)
Strand = Plus / Plus


Query: 1323 aagaacaagaacaagaa 1339
|||||||||||||||||
Sbjct: 19 aagaacaagaacaagaa 35


Score = 30.2 bits (15), Expect = 6.3
Identities = 15/15 (100%)
Strand = Plus / Plus


Query: 1326 aacaagaacaagaag 1340
|||||||||||||||
Sbjct: 172 aacaagaacaagaag 186


Database: CSM
Posted date: Jun 9, 2004 7:35 PM
Number of letters in database: 5,674,871
Number of sequences in database: 6905

Lambda K H
1.37 0.711 1.31

Gapped
Lambda K H
1.37 0.711 1.31


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 44,599
Number of Sequences: 6905
Number of extensions: 44599
Number of successful extensions: 12825
Number of sequences better than 10.0: 1479
length of query: 1432
length of database: 5,674,871
effective HSP length: 16
effective length of query: 1416
effective length of database: 5,564,391
effective search space: 7879177656
effective search space used: 7879177656
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 15 (30.2 bits)
dna update 2009. 5.19
Homology vs DNA
Query= Contig-U02677-1 (Contig-U02677-1Q) /CSM_Contig/Contig-U02677-1Q.Seq.d
(1432 letters)

Database: ddbj_A
102,105,510 sequences; 101,790,757,118 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value N

(BJ325333) Dictyostelium discoideum cDNA clone:dda13l20, 5' ... 1158 0.0 2
(AC115581) Dictyostelium discoideum chromosome 2 map complem... 801 0.0 6
(BJ344338) Dictyostelium discoideum cDNA clone:dda18n01, 3' ... 801 0.0 3
(BJ399936) Dictyostelium discoideum cDNA clone:dds8i03, 3' e... 801 0.0 3
(BJ327376) Dictyostelium discoideum cDNA clone:dda20p01, 5' ... 965 0.0 3
(BJ359408) Dictyostelium discoideum cDNA clone:ddc14i12, 5' ... 948 0.0 2
(BJ326603) Dictyostelium discoideum cDNA clone:dda17m03, 5' ... 898 0.0 3
(BJ399575) Dictyostelium discoideum cDNA clone:dds6f15, 3' e... 801 0.0 3
(BJ343781) Dictyostelium discoideum cDNA clone:dda17m03, 3' ... 801 0.0 3
(BJ400228) Dictyostelium discoideum cDNA clone:dds9h08, 3' e... 801 0.0 2
(BJ388137) Dictyostelium discoideum cDNA clone:dds8i03, 5' e... 819 0.0 2
(BJ400026) Dictyostelium discoideum cDNA clone:dds8d14, 3' e... 789 0.0 1
(BJ346812) Dictyostelium discoideum cDNA clone:dda25k02, 3' ... 745 0.0 1
(BJ344699) Dictyostelium discoideum cDNA clone:dda20p01, 3' ... 741 0.0 1
(BJ373285) Dictyostelium discoideum cDNA clone:ddc2e14, 3' e... 408 0.0 2
(BJ372831) Dictyostelium discoideum cDNA clone:ddc14i12, 3' ... 694 0.0 1
(BJ342419) Dictyostelium discoideum cDNA clone:dda13l20, 3' ... 680 0.0 1
(BJ326830) Dictyostelium discoideum cDNA clone:dda18n01, 5' ... 640 0.0 2
(BJ388224) Dictyostelium discoideum cDNA clone:dds8d14, 5' e... 563 e-164 2
(BJ329482) Dictyostelium discoideum cDNA clone:dda25k02, 5' ... 502 e-137 1
(BJ388395) Dictyostelium discoideum cDNA clone:dds9h08, 5' e... 456 e-135 3
(BJ388642) Dictyostelium discoideum cDNA clone:dds6f15, 5' e... 400 e-115 2
(AC114263) Dictyostelium discoideum chromosome 2 map 215673-... 42 8e-05 7
(AC116957) Dictyostelium discoideum chromosome 2 map 1685067... 44 2e-04 6
(BX296533) Zebrafish DNA sequence from clone DKEY-54O1 in li... 58 0.001 1
(BX005049) Zebrafish DNA sequence from clone DKEY-89O18 in l... 58 0.001 1
(CU466299) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 50 0.001 8
(BX001012) Zebrafish DNA sequence from clone CH211-11C20 in ... 56 0.004 1
(AE014298) Drosophila melanogaster chromosome X, complete se... 56 0.004 1
(AC104515) Drosophila melanogaster, chromosome X, region 20B... 56 0.004 1
(AC176792) Strongylocentrotus purpuratus clone R3-3106M23, W... 56 0.004 1
(AC013173) Drosophila melanogaster, *** SEQUENCING IN PROGRE... 56 0.004 1
(AC116984) Dictyostelium discoideum chromosome 2 map 2567470... 40 0.004 7
(AC187356) Medicago truncatula chromosome 2 BAC clone mth2-8... 48 0.006 7
(CP000942) Ureaplasma parvum serovar 3 str. ATCC 27815, comp... 36 0.007 17
(AF222894) Ureaplasma parvum serovar 3 str. ATCC 700970, com... 36 0.007 17
(AC115612) Dictyostelium discoideum chromosome 2 map 6245135... 38 0.008 8
(AE014824) Plasmodium falciparum 3D7 chromosome 14 section 9... 38 0.010 2
(DU977958) AUAC-aaa10b07.b1 Ascaris suum whole genome shotgu... 38 0.013 2
(AE014845) Plasmodium falciparum 3D7 chromosome 12, section ... 32 0.014 13
(BX957285) Zebrafish DNA sequence from clone CH211-160M18 in... 54 0.015 1
(BX897729) Zebrafish DNA sequence from clone DKEY-240A12 in ... 54 0.015 1
(AC115604) Dictyostelium discoideum chromosome 2 map 4354771... 54 0.015 1
(CT462066) Sus scrofa genomic clone CH242-423B18, genomic su... 54 0.015 1
(AM437134) Vitis vinifera contig VV78X254582.11, whole genom... 50 0.018 2
(BJ364474) Dictyostelium discoideum cDNA clone:ddc31h23, 5' ... 40 0.020 2
(CJ483794) Macaca fascicularis mRNA, clone: QtsA-11308, 5' e... 42 0.022 2
(AM455635) Vitis vinifera contig VV78X055153.5, whole genome... 50 0.024 2
(AM483148) Vitis vinifera contig VV78X133014.2, whole genome... 34 0.025 7
(AF106575) Caenorhabditis elegans cosmid K04F1, complete seq... 42 0.034 4
(AC152098) Bos taurus clone CH240-2F4, WORKING DRAFT SEQUENC... 38 0.038 2
(AC170513) Bos taurus clone CH240-244B17, WORKING DRAFT SEQU... 38 0.038 2
(BX293980) Mycoplasma mycoides subsp. mycoides SC str. PG1, ... 36 0.039 16
(AL732436) Zebrafish DNA sequence from clone BUSM1-21A14 in ... 36 0.039 2
(CR388089) Zebrafish DNA sequence from clone CH211-87C14. 42 0.046 5
(BX572647) Zebrafish DNA sequence from clone CH211-149N1 in ... 38 0.049 8
(EC821592) SME00008813 esmbsro2 Sawyeria marylandensis cDNA,... 42 0.049 2
(AE017308) Mycoplasma mobile 163K complete genome. 36 0.049 21
(EC820305) SME00009056 esmbsro2 Sawyeria marylandensis cDNA,... 42 0.049 2
(EC817752) SME00004735 esmbsro2 Sawyeria marylandensis cDNA,... 42 0.052 2
(AF275723) Dictyostelium discoideum Ras guanine nucleotide e... 36 0.054 5
(AC225541) Medicago truncatula clone mth2-69f16, WORKING DRA... 34 0.060 9
(CR931764) Zebrafish DNA sequence from clone DKEY-92I17 in l... 52 0.061 1
(BX510315) Zebrafish DNA sequence from clone CH211-59I18 in ... 52 0.061 1
(BX276112) Zebrafish DNA sequence from clone CH211-220I12 in... 52 0.061 1
(BX005458) Zebrafish DNA sequence from clone CH211-173L10 in... 52 0.061 1
(EU559333) Peromyscus leucopus beta-globin gene cluster, par... 52 0.061 1
(AM466688) Vitis vinifera contig VV78X024027.22, whole genom... 52 0.061 1
(AF362370) Dictyostelium discoideum histidine kinase DhkH (d... 52 0.061 1
(AC129784) Rattus norvegicus clone CH230-135A18, *** SEQUENC... 52 0.061 1
(AC107115) Rattus norvegicus clone CH230-9P6, *** SEQUENCING... 52 0.061 1
(CU855619) Zebrafish DNA sequence *** SEQUENCING CANCELLED *... 52 0.061 1
(CU695194) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 52 0.061 1
(BG937026) jh_50243.b1 Penaeus chinensis' cephalothorax cDNA... 52 0.061 1
(EY324830) CAWY10532.fwd CAWY Helobdella robusta Subtracted ... 52 0.061 1
(CU855808) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 44 0.070 5
(AL844509) Plasmodium falciparum chromosome 13. 44 0.080 10
(FP102781) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 44 0.096 4
(AE014842) Plasmodium falciparum 3D7 chromosome 11 section 7... 44 0.12 12
(CU694363) Zebrafish DNA sequence from clone ZFOS-659F11. 28 0.12 3
(AY160091) Dictyostelium discoideum nucleotide exchange fact... 36 0.12 5
(BJ422094) Dictyostelium discoideum cDNA clone:ddv44g23, 5' ... 36 0.13 3
(AC213421) Populus trichocarpa clone POP033-L19, complete se... 44 0.13 8
(AC179443) Strongylocentrotus purpuratus clone R3-1040H19, W... 38 0.14 2
(AC174734) Strongylocentrotus purpuratus clone R3-1115F23, W... 38 0.14 2
(CP000263) Buchnera aphidicola str. Cc (Cinara cedri), compl... 36 0.15 18
(AC096135) Rattus norvegicus clone CH230-11E5, *** SEQUENCIN... 36 0.15 11
(CP000123) Mycoplasma capricolum subsp. capricolum ATCC 2734... 36 0.15 19
(AC116987) Dictyostelium discoideum chromosome 2 map 3527441... 36 0.16 5
(AC184435) Strongylocentrotus purpuratus clone R3-3094B2, WO... 42 0.17 6
(AF063866) Melanoplus sanguinipes entomopoxvirus, complete g... 34 0.18 11
(CU469464) Candidatus Phytoplasma mali strain AT complete ch... 36 0.18 21
(CU856540) Zebrafish DNA sequence from clone CH73-128C2 in l... 36 0.18 5
(EI901711) VUH2-41A19TV VUUBBa (VUH2) Vigna unguiculata geno... 38 0.18 2
(EI941684) VUH2-88E7TR VUUBBa (VUH2) Vigna unguiculata genom... 38 0.18 2
(CA359862) 632945 NCCCWA 1RT Oncorhynchus mykiss cDNA clone ... 38 0.18 2
(AQ652014) Sheared DNA-17F24.TF Sheared DNA Trypanosoma bruc... 46 0.18 2
(BJ330366) Dictyostelium discoideum cDNA clone:dda31f09, 5' ... 36 0.19 2
(BJ347824) Dictyostelium discoideum cDNA clone:dda31f09, 3' ... 36 0.19 2
(CU797285) A BAC library has been constructed from PN40024 g... 44 0.21 2
(CP000361) Arcobacter butzleri RM4018, complete genome. 42 0.23 21
(AP009066) Lotus japonicus genomic DNA, chromosome 4, clone:... 34 0.24 6
(CT573311) Zebrafish DNA sequence from clone DKEY-51P7 in li... 50 0.24 1
(CR855131) Zebrafish DNA sequence from clone DKEY-69A10 in l... 50 0.24 1
(CR848665) Zebrafish DNA sequence from clone CH211-276C2 in ... 50 0.24 1
(BX005453) Zebrafish DNA sequence from clone CH211-160E19 in... 50 0.24 1
(AL928830) Zebrafish DNA sequence from clone CH211-119E16. 50 0.24 1
(AL928814) Zebrafish DNA sequence from clone CH211-149O12 in... 50 0.24 1
(AC186179) Pan troglodytes BAC clone CH251-729H4 from chromo... 50 0.24 1
(AM479878) Vitis vinifera contig VV78X203626.3, whole genome... 50 0.24 1
(AM427413) Vitis vinifera contig VV78X254582.10, whole genom... 50 0.24 1
(AC117076) Dictyostelium discoideum chromosome 2 map 3323568... 50 0.24 1
(AC141798) Apis mellifera clone CH224-61C22, *** SEQUENCING ... 50 0.24 1
(CU929450) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 50 0.24 1
(CU407219) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 50 0.24 1
(AC201710) Aotus nancymaae clone CH258-388K12, WORKING DRAFT... 50 0.24 1
(AL748211) Danio rerio genomic clone DKEY-19D20, genomic sur... 50 0.24 1
(CT454376) Sus scrofa genomic clone CH242-452G22, genomic su... 50 0.24 1
(DX435800) BE1096_L24_R IASMA L1 HindIII BAC library Vitis v... 44 0.25 2
(BJ389170) Dictyostelium discoideum cDNA clone:dds17c22, 5' ... 40 0.26 2
(BJ396844) Dictyostelium discoideum cDNA clone:dds44m01, 5' ... 40 0.27 2
(BJ388762) Dictyostelium discoideum cDNA clone:dds16k05, 5' ... 40 0.27 2
(BJ371091) Dictyostelium discoideum cDNA clone:ddc56k13, 5' ... 40 0.27 2
(BJ360559) Dictyostelium discoideum cDNA clone:ddc6p18, 5' e... 40 0.27 2
(AC116305) Dictyostelium discoideum chromosome 2 map 1005175... 44 0.27 5
(EL501329) 069_PFLAB1-M-P18B.AB1 Blood stage Plasmodium falc... 34 0.27 4
(CU695039) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 34 0.27 8
(AC116963) Dictyostelium discoideum chromosome 2 map 4657875... 36 0.28 6
(BJ370370) Dictyostelium discoideum cDNA clone:ddc53j23, 5' ... 40 0.28 2
(BJ369932) Dictyostelium discoideum cDNA clone:ddc52e14, 5' ... 40 0.28 2
(BJ389642) Dictyostelium discoideum cDNA clone:dds19d18, 5' ... 40 0.29 2
(BJ370320) Dictyostelium discoideum cDNA clone:ddc53p14, 5' ... 40 0.29 2
(BJ370182) Dictyostelium discoideum cDNA clone:ddc53o01, 5' ... 40 0.29 2
(BJ368992) Dictyostelium discoideum cDNA clone:ddc48i22, 5' ... 40 0.29 2
(BJ368987) Dictyostelium discoideum cDNA clone:ddc48h22, 5' ... 40 0.29 2
(AE016826) Buchnera aphidicola str. Bp (Baizongia pistaciae)... 34 0.29 19
(ER521531) 1093015582685 Global-Ocean-Sampling_GS-35-01-01-1... 34 0.29 4
(FH566331) CHO_OF4693xp05f1.ab1 CHO_OF4 Nicotiana tabacum ge... 44 0.31 2
(CR352210) Zebrafish DNA sequence from clone DKEY-166N8 in l... 38 0.32 8
(AF362374) Dictyostelium discoideum histidine kinase DhkM (d... 36 0.33 3
(AC132984) Rattus norvegicus clone CH230-461B11, *** SEQUENC... 40 0.34 10
(GE882166) 1112934271056 BABEVCEREB-C-01-1-7KB Papio anubis ... 48 0.34 2
(AC116956) Dictyostelium discoideum chromosome 2 map 1418423... 42 0.35 7
(FM992688) Candida dubliniensis CD36 chromosome 1, complete ... 38 0.36 16
(Z48755) S.cerevisiae chromosome XIII cosmid 8325. 44 0.36 2
(AC188447) Gallus gallus BAC clone CH261-140M5 from chromoso... 40 0.36 6
(AP007443) Lotus japonicus genomic DNA, chromosome 4, clone:... 34 0.37 6
(AM481934) Vitis vinifera contig VV78X011754.4, whole genome... 36 0.37 4
(BX571712) Zebrafish DNA sequence from clone DKEYP-9A1 in li... 38 0.39 6
(BJ369925) Dictyostelium discoideum cDNA clone:ddc52c15, 5' ... 38 0.41 2
(AM442497) Vitis vinifera contig VV78X137285.3, whole genome... 38 0.42 3
(U23478) Dictyostelium discoideum phosphatidylinositol-4,5-d... 44 0.43 3
(BJ328764) Dictyostelium discoideum cDNA clone:dda29m09, 5' ... 36 0.45 2
(AP009719) Lotus japonicus genomic DNA, clone: LjT28H07, TM1... 34 0.46 10
(AC016914) Homo sapiens chromosome 14 clone RP11-502F23, WOR... 38 0.46 8
(AC166237) Medicago truncatula clone mth2-6a22, complete seq... 38 0.47 8
(AC178839) Strongylocentrotus purpuratus clone R3-29D13, WOR... 38 0.47 8
(AC117072) Dictyostelium discoideum chromosome 2 map 3879572... 42 0.50 3
(CR354383) Zebrafish DNA sequence from clone CH211-123O7 in ... 48 0.51 6
(CP000312) Clostridium perfringens SM101, complete genome. 34 0.52 22
(AE002103) Ureaplasma parvum serovar 3 str. ATCC 700970 sect... 36 0.52 3
(CU468969) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 44 0.52 6
(AC080131) Trypanosoma brucei chromosome 4 clone RPCI93-2H8,... 34 0.52 2
(AC116918) Dictyostelium discoideum chromosome 2 map 6143698... 34 0.52 5
(CR356233) Zebrafish DNA sequence from clone CH211-262N1 in ... 34 0.53 2
(BJ396554) Dictyostelium discoideum cDNA clone:dds43h02, 5' ... 34 0.53 3
(AC215648) Populus trichocarpa clone POP036-O24, complete se... 34 0.54 9
(AC117176) Dictyostelium discoideum chromosome 2 map 5018074... 42 0.55 7
(AF016444) Caenorhabditis elegans cosmid C36C5, complete seq... 36 0.56 2
(CU861898) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 44 0.57 4
(FE155303) LV_LO_RA016D15f Litopenaeus vannamei lymphoid org... 44 0.60 2
(BJ370021) Dictyostelium discoideum cDNA clone:ddc52j21, 5' ... 40 0.61 3
(AC154150) Callithrix jacchus clone CH259-202J21, WORKING DR... 38 0.62 5
(CP000728) Clostridium botulinum F str. Langeland, complete ... 40 0.62 19
(AC135833) Danio rerio strain Tue clone CH211-201G20, WORKIN... 48 0.66 5
(EJ185664) 1092344150261 Global-Ocean-Sampling_GS-27-01-01-1... 38 0.67 2
(BJ416225) Dictyostelium discoideum cDNA clone:ddv25j09, 5' ... 36 0.72 2
(AC144549) Sorghum bicolor clone sorchlor map chloroplast, W... 38 0.77 6
(AL645743) Zebrafish DNA sequence from clone RP71-1N7 in lin... 40 0.81 9
(AL929358) Plasmodium falciparum strain 3D7, chromosome 9; s... 38 0.82 11
(BC034128) Mus musculus LIM domain only 3, mRNA (cDNA clone ... 34 0.83 3
(BJ389640) Dictyostelium discoideum cDNA clone:dds19d14, 5' ... 40 0.83 2
(CR925677) Ehrlichia ruminantium str. Gardel, complete genome. 38 0.84 23
(AF151111) Dictyostelium discoideum cheater ChtA (chtA) gene... 36 0.85 4
(BG902343) jh_15791.z1 Penaeus chinensis' cephalothorax cDNA... 44 0.85 2
(BJ413627) Dictyostelium discoideum cDNA clone:ddv16m12, 5' ... 38 0.87 2
(CU207217) Zebrafish DNA sequence from clone CH211-264F5. 42 0.90 7
(AC116924) Dictyostelium discoideum chromosome 2 map 6357117... 32 0.92 10
(AC177402) Strongylocentrotus purpuratus clone R3-53M19, WOR... 42 0.93 8
(BX855589) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 40 0.93 9
(BJ416837) Dictyostelium discoideum cDNA clone:ddv27a16, 5' ... 36 0.94 2
(CU928071) Zebrafish DNA sequence from clone CH73-379C5. 48 0.95 1
(CU302318) Zebrafish DNA sequence from clone DKEY-100F17 in ... 48 0.95 1
(CR753895) Zebrafish DNA sequence from clone DKEYP-114A12 in... 48 0.95 1
(BX901964) Zebrafish DNA sequence from clone DKEYP-20A7 in l... 48 0.95 1
(BX548032) Zebrafish DNA sequence from clone CH211-145G9 in ... 48 0.95 1
(BX322615) Zebrafish DNA sequence from clone DKEY-81L20 in l... 48 0.95 1
(AL954831) Zebrafish DNA sequence from clone DKEY-12H9 in li... 48 0.95 1
(AM439566) Vitis vinifera, whole genome shotgun sequence, co... 48 0.95 1
(DD121254) STAPHYLOCOCCUS AUREUS PROTEINS AND NUCLEIC ACIDS. 48 0.95 1
(CS711281) Sequence 3821 from Patent EP1829892. 48 0.95 1
(AX620858) Sequence 3821 from Patent WO02094868. 48 0.95 1
(AR535558) Sequence 120 from patent US 6737248. 48 0.95 1
(AR354002) Sequence 120 from patent US 6593114. 48 0.95 1
(AY159040) Dictyostelium discoideum LvsD (lvsD) gene, partia... 48 0.95 1
(AC116982) Dictyostelium discoideum chromosome 2 map 3622643... 48 0.95 1
(FP236597) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 48 0.95 1
(CU984576) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 48 0.95 1
(CU929352) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 48 0.95 1
(CU928633) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 48 0.95 1
(CU915765) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 48 0.95 1
(BX649285) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 48 0.95 1
(BX571962) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 48 0.95 1
(AC202696) Macaca mulatta clone CH250-409O22, WORKING DRAFT ... 48 0.95 1
(AC179400) Strongylocentrotus purpuratus clone R3-60K13, WOR... 48 0.95 1
(AY813798) Schistosoma japonicum SJCHGC09270 protein mRNA, c... 48 0.95 1
(AK231333) Sus scrofa mRNA, clone:ITT010038G03, expressed in... 48 0.95 1
(DU264461) 1098574272377 CHORI-243 Ovis aries genomic clone ... 48 0.95 1
(CZ542443) SRAA-aad44b11.g1 Strongyloides ratti whole genome... 48 0.95 1
(CC944627) BOIEX78TF BO_1.4_1.6_KB_nuc Brassica oleracea gen... 48 0.95 1
(DY887016) CeleSEQ2881 Cunninghamella elegans pBluescript (E... 48 0.95 1
(AU039373) Dictyostelium discoideum slug cDNA, clone SLH662. 48 0.95 1
(CV750767) SJL31-002_B05_SJL31-002B05-T7_041.ab1 SJL Schisto... 48 0.95 1
(CV746430) SJL_31_004__1-3__34.T7_041.ab1 SJL Schistosoma ja... 48 0.95 1
(CV746426) SJL_31_004__1-3__32.T7_032.ab1 SJL Schistosoma ja... 48 0.95 1
(CV693863) SJS_009_21.T7 SJS Schistosoma japonicum cDNA, mRN... 48 0.95 1
(BW979455) Sus scrofa mRNA, clone:ITT010038G03, 5' end, expr... 48 0.95 1
(BJ370416) Dictyostelium discoideum cDNA clone:ddc54f02, 5' ... 48 0.95 1
(FK732136) av01019d05r1.1 Symbiotic sea anemone (Anemonia vi... 48 0.95 1
(FG928534) UCRVU09_CCNT8908_g1 Cowpea UCR 707 Mixed Tissue a... 48 0.95 1
(FG922456) UCRVU09_CCNT5324_g1 Cowpea UCR 707 Mixed Tissue a... 48 0.95 1
(FG922455) UCRVU09_CCNT5324_b1 Cowpea UCR 707 Mixed Tissue a... 48 0.95 1
(FG901583) UCRVU08_CCNS1806_g1 Cowpea IT97K-461-4 Mixed Tiss... 48 0.95 1
(FG901582) UCRVU08_CCNS1806_b1 Cowpea IT97K-461-4 Mixed Tiss... 48 0.95 1
(FG837288) UCRVU05_CCNN2144_g1 Cowpea IT84S-2049 Mixed Tissu... 48 0.95 1
(FF603113) G825P5107RA2.T0 Acorn worm normalized gastrula pE... 48 0.95 1
(FC457922) UCRVU05_CCNN750_g1 Cowpea IT84S-2049 Mixed Tissue... 48 0.95 1
(FC075851) gmnbpcic_0010g23.pDNRm13r Gadus morhua pyloric ca... 48 0.95 1
(EX185603) gmnbspic_0011e23.pDNRm13r Gadus morhua spleen lib... 48 0.95 1
(EV389380) EST_sfon_evi_756876 sfonevi mixed_tissue Salvelin... 48 0.95 1
(EV389256) EST_sfon_evi_756813 sfonevi mixed_tissue Salvelin... 48 0.95 1
(ES473208) gmnbbr_0016p07.pDNRF2 Gadus morhua brain library ... 48 0.95 1
(CP000736) Staphylococcus aureus subsp. aureus JH1, complete... 48 0.95 1
(CP000730) Staphylococcus aureus subsp. aureus USA300_TCH151... 48 0.95 1
(CP000703) Staphylococcus aureus subsp. aureus JH9, complete... 48 0.95 1
(CP000255) Staphylococcus aureus subsp. aureus USA300_FPR375... 48 0.95 1
(CP000253) Staphylococcus aureus subsp. aureus NCTC 8325, co... 48 0.95 1
(CP000046) Staphylococcus aureus subsp. aureus COL, complete... 48 0.95 1
(BX571857) Staphylococcus aureus strain MSSA476, complete ge... 48 0.95 1
(BX571856) Staphylococcus aureus subsp. aureus strain MRSA25... 48 0.95 1
(BA000033) Staphylococcus aureus subsp. aureus MW2 DNA, comp... 48 0.95 1
(BA000018) Staphylococcus aureus subsp. aureus N315 DNA, com... 48 0.95 1
(BA000017) Staphylococcus aureus subsp. aureus Mu50 DNA, com... 48 0.95 1
(AP009351) Staphylococcus aureus subsp. aureus str. Newman D... 48 0.95 1
(AP009324) Staphylococcus aureus subsp. aureus Mu3 DNA, comp... 48 0.95 1
(AJ131754) Staphylococcus aureus ORF1 (partial), ORF2, ORF3,... 48 0.95 1
(AC178166) Strongylocentrotus purpuratus clone R3-3081J24, W... 42 0.97 6
(CW856273) sh2b7-14.b_101.ab1 Whole-genome shotgun library o... 46 0.98 2
(CE720969) tigr-gss-dog-17000329657745 Dog Library Canis lup... 44 1.00 2
(EY502995) CBBP6680.fwd CBBP Hirudo medicinalis hermaphrodit... 44 1.0 2
(BJ338487) Dictyostelium discoideum cDNA clone:dda61p14, 5' ... 36 1.0 2
(BJ369858) Dictyostelium discoideum cDNA clone:ddc52d09, 5' ... 40 1.0 2
(DQ396875) Scenedesmus obliquus strain UTEX 393 chloroplast,... 32 1.1 13
(BJ370314) Dictyostelium discoideum cDNA clone:ddc53o14, 5' ... 40 1.1 2
(BJ369886) Dictyostelium discoideum cDNA clone:ddc52k09, 5' ... 40 1.1 2
(BJ337062) Dictyostelium discoideum cDNA clone:dda56i05, 5' ... 40 1.1 2
(EY382292) CAXA3959.rev CAXA Helobdella robusta Subtracted L... 42 1.1 2
(BJ370044) Dictyostelium discoideum cDNA clone:ddc52o20, 5' ... 40 1.1 2
(BJ370014) Dictyostelium discoideum cDNA clone:ddc52h24, 5' ... 40 1.1 2
(AC163745) Pan troglodytes BAC clone CH251-381N15 from chrom... 34 1.1 8
(BJ370249) Dictyostelium discoideum cDNA clone:ddc53o08, 5' ... 40 1.1 2
(BX005150) Zebrafish DNA sequence from clone CH211-105J21 in... 34 1.1 7
(BJ370089) Dictyostelium discoideum cDNA clone:ddc52i04, 5' ... 40 1.1 2
(AM478748) Vitis vinifera contig VV78X080079.5, whole genome... 44 1.1 2
(C24334) Dictyostelium discoideum gamete cDNA, clone FC-AR24. 36 1.1 2
(DE928035) Macropus eugenii DNA, BAC clone: MEB1-117M06_F, 5... 38 1.2 2
(BX005373) Zebrafish DNA sequence from clone DKEY-221M4 in l... 42 1.2 4
(EY343346) CAWZ12441.fwd CAWZ Helobdella robusta Primary Lat... 40 1.2 2
(EY382293) CAXA3959.fwd CAXA Helobdella robusta Subtracted L... 42 1.2 2
(AC123719) Mus musculus chromosome 13, clone RP23-412A14, co... 34 1.2 11
(EK257703) 1095462024580 Global-Ocean-Sampling_GS-31-01-01-1... 30 1.3 4
(AV297850) Mus musculus 8 days embryo cDNA, RIKEN full-lengt... 38 1.3 2
(AC224220) Bos taurus clone CH240-446K15, WORKING DRAFT SEQU... 38 1.3 8
(AP011072) Solanum lycopersicum DNA, chromosome 8, clone: C0... 44 1.3 5
(DY885688) CeleSEQ1062 Cunninghamella elegans pBluescript (E... 46 1.3 2
(DY889256) CeleSEQ8302 Cunninghamella elegans pBluescript (E... 36 1.3 2
(CP001184) Ureaplasma urealyticum serovar 10 str. ATCC 33699... 32 1.3 20
(BX649312) Zebrafish DNA sequence from clone DKEY-170M15 in ... 36 1.3 6
(EK139332) 1095454063196 Global-Ocean-Sampling_GS-31-01-01-1... 40 1.4 2
(DU970867) 380618 Tomato MboI BAC Library Solanum lycopersic... 38 1.4 2
(FG285854) 1108770704037 New World Screwworm Egg 9261 ESTs C... 40 1.4 2
(AP006852) Candida albicans genomic DNA, chromosome 7, compl... 38 1.5 20
(AC146706) Medicago truncatula clone mth2-108g5, complete se... 38 1.5 8
(AC116925) Dictyostelium discoideum chromosome 2 map 4189423... 44 1.5 6
(CT573079) Zebrafish DNA sequence from clone CH73-149G16 in ... 36 1.5 4
(AJ010592) Guillardia theta DNA for complete sequence of nuc... 38 1.5 11
(AC181567) Strongylocentrotus purpuratus clone R3-1109J19, W... 42 1.5 8
(AC177955) Strongylocentrotus purpuratus clone R3-3049C24, W... 34 1.5 9
(AC174574) Bos taurus clone CH240-400M3, WORKING DRAFT SEQUE... 38 1.6 4
(AL929353) Plasmodium falciparum strain 3D7, chromosome 5, s... 34 1.6 10
(BJ368400) Dictyostelium discoideum cDNA clone:ddc46f15, 5' ... 34 1.7 3
(AC006899) Caenorhabditis elegans clone Y73B6y, *** SEQUENCI... 36 1.7 9
(CR382398) Plasmodium falciparum chromosome 6, complete sequ... 38 1.8 10
(AC116977) Dictyostelium discoideum chromosome 2 map 5515173... 38 1.8 7
(AL732610) Zebrafish DNA sequence from clone CH211-12N8. 44 1.8 5
(AM475307) Vitis vinifera, whole genome shotgun sequence, co... 38 1.8 8
(AC149038) Medicago truncatula chromosome 7 clone mth2-29a5,... 38 1.8 8
(BJ389711) Dictyostelium discoideum cDNA clone:dds19f19, 5' ... 36 1.8 2
(AE017332) Mycoplasma hyopneumoniae 232, complete genome. 30 1.9 23
(FP015963) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 36 1.9 5
(CU633479) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 36 1.9 2
(AC025508) Homo sapiens, clone RP11-659A24, complete sequence. 36 1.9 2
(AC012346) Homo sapiens chromosome , clone RP11-15N22, compl... 36 1.9 2
(CT573048) Zebrafish DNA sequence from clone CH211-95O16 in ... 34 1.9 2
(AY160093) Dictyostelium discoideum nucleotide exchange fact... 44 2.0 3
(CU862019) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 36 2.0 2
(BX323866) Zebrafish DNA sequence from clone CH211-278M12 in... 34 2.0 2
(AE014829) Plasmodium falciparum 3D7 chromosome 10 section 1... 34 2.0 11
(AE014831) Plasmodium falciparum 3D7 chromosome 10 section 3... 34 2.0 11
(AC200516) Pongo abelii BAC clone CH276-501A9 from chromosom... 34 2.0 10
(AE014825) Plasmodium falciparum 3D7 chromosome 14 section 1... 34 2.1 13
(AE009951) Fusobacterium nucleatum subsp. nucleatum ATCC 255... 38 2.1 18
(AC130773) Rattus norvegicus clone CH230-90G21, *** SEQUENCI... 38 2.1 11
(AC009111) Homo sapiens chromosome 16 clone RP11-468D1, comp... 38 2.2 7
(AM451694) Vitis vinifera contig VV78X060120.3, whole genome... 36 2.2 2
(CU013537) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 38 2.2 7
(BJ433872) Dictyostelium discoideum cDNA clone:ddv23o04, 3' ... 34 2.2 3
(AC232196) Ornithorhynchus anatinus clone OA_Bb-143I21, WORK... 44 2.2 4
(CP000678) Methanobrevibacter smithii ATCC 35061, complete g... 32 2.3 18
(AM428624) Vitis vinifera contig VV78X178189.4, whole genome... 44 2.3 2
(EF115542) Sorghum bicolor cultivar BTx623 chloroplast, comp... 38 2.3 6
(U86962) Dictyostelium discoideum MigA (migA) gene, complete... 34 2.3 2
(BJ392701) Dictyostelium discoideum cDNA clone:dds28j14, 5' ... 36 2.4 2
(AC079330) Homo sapiens chromosome 11 clone RP11-289M10 map ... 42 2.4 9
(EU022319) Sus scrofa B-cell activating factor gene, complet... 36 2.4 5
(AM634256) Entamoeba dispar GSS, clone dispar117d01.p1k. 32 2.4 3
(AM437361) Vitis vinifera contig VV78X051162.11, whole genom... 44 2.4 2
(EY374054) CAXA14876.rev CAXA Helobdella robusta Subtracted ... 32 2.5 3
(DU848968) 43411 Tomato HindIII BAC Library Solanum lycopers... 34 2.5 2
(EB615121) AGENCOURT_56968966 D. grimshawi EST Drosophila gr... 32 2.5 2
(EX603749) 255340466 Pea aphid whole body normalized full le... 34 2.5 2
(EX622408) 255419449 Pea aphid whole body normalized full le... 34 2.5 2
(AC182465) Pan troglodytes BAC clone CH251-502A24 from chrom... 38 2.5 7
(AC179328) Strongylocentrotus purpuratus clone R3-1102L8, WO... 44 2.5 8
(DE213210) Branchiostoma floridae DNA, clone: CH302-103_P16_... 34 2.5 2
(AU262547) Dictyostelium discoideum vegetative cDNA clone:VS... 36 2.6 2
(DE197684) Branchiostoma floridae DNA, clone: CH302-081_J19_... 34 2.6 2
(EJ909961) 1093018533028 Global-Ocean-Sampling_GS-30-02-01-1... 40 2.6 3
(AC123513) Dictyostelium discoideum strain AX4 chromosome 2 ... 36 2.6 7
(AP009180) Candidatus Carsonella ruddii PV DNA, complete gen... 32 2.6 13
(DE210130) Branchiostoma floridae DNA, clone: CH302-099_J12_... 34 2.6 2
(AM440473) Vitis vinifera contig VV78X157770.9, whole genome... 44 2.6 2
(CR956368) M.truncatula DNA sequence from clone MTH2-64D19 o... 36 2.7 5
(AC180525) Strongylocentrotus purpuratus clone R3-3099D24, W... 36 2.7 6
(AF165818) Guillardia theta nucleomorph chromosome 1, comple... 38 2.7 11
(BD061520) Genome DNA of symbiotic bacteria of aphid. 36 2.8 20
(AR409405) Sequence 1 from patent US 6632935. 36 2.8 20
(BA000003) Buchnera aphidicola str. APS (Acyrthosiphon pisum... 36 2.8 20
(AC177099) Strongylocentrotus purpuratus clone R3-4012L22, W... 42 2.8 8
(BM755030) K-EST0032683 S10SNU1 Homo sapiens cDNA clone S10S... 44 2.8 2
(EJ317298) 1095403307797 Global-Ocean-Sampling_GS-27-01-01-1... 34 2.8 3
(AY466392) Cryptosporidium parvum guanosine monophosphate sy... 38 2.8 2
(AM441878) Vitis vinifera contig VV78X074614.6, whole genome... 44 2.8 2
(EJ868927) 1093018305592 Global-Ocean-Sampling_GS-30-02-01-1... 40 2.9 3
(FM992690) Candida dubliniensis CD36 chromosome 3, complete ... 40 2.9 16
(AC200973) Strongylocentrotus purpuratus clone R3-112M5, WOR... 34 2.9 6
(BK006346) TPA_exp: Apis mellifera sex determination locus, ... 34 2.9 6
(CR391948) Zebrafish DNA sequence from clone DKEY-42O15 in l... 34 3.0 8
(EC820861) SME00009058 esmbsro2 Sawyeria marylandensis cDNA,... 32 3.0 4
(AC073218) Homo sapiens BAC clone RP11-529E15 from 2, comple... 38 3.0 6
(AF362375) Dictyostelium discoideum histidine kinase DhkE (d... 40 3.0 3
(ER543150) 1093016088896 Global-Ocean-Sampling_GS-35-01-01-1... 32 3.3 3
(EK139473) 1095454077180 Global-Ocean-Sampling_GS-31-01-01-1... 38 3.3 3
(AC116330) Dictyostelium discoideum chromosome 2 map 3191214... 42 3.3 7
(AC127092) Rattus norvegicus clone CH230-170D21, WORKING DRA... 38 3.4 7
(BJ326391) Dictyostelium discoideum cDNA clone:dda16g07, 5' ... 38 3.4 2
(EI206166) MUGQ_CH252P206B21Sp6_GL494_095 CHORI-252 Vervet M... 42 3.4 2
(AM430914) Vitis vinifera contig VV78X171756.3, whole genome... 34 3.4 3
(BI509374) BB170013B20C07.5 Bee Brain Normalized/Subtracted ... 42 3.5 2
(CJ444997) Macaca fascicularis mRNA, clone: QflA-10122, 5' e... 40 3.5 3
(BX246911) Danio rerio genomic clone DKEY-221H9, genomic sur... 38 3.5 2
(EJ101138) 1095469467359 Global-Ocean-Sampling_GS-26-01-01-1... 34 3.6 3
(AX345444) Sequence 515 from Patent WO0200928. 30 3.6 6
(BJ410199) Dictyostelium discoideum cDNA clone:ddv11i13, 5' ... 36 3.6 2
(BZ394980) EINDQ63TR EI_10_12_KB Entamoeba invadens genomic ... 40 3.6 2
(AL844501) Plasmodium falciparum strain 3D7, chromosome 1. 36 3.6 11
(AC178556) Strongylocentrotus purpuratus clone R3-3027K04, W... 38 3.7 9
(CU928072) Zebrafish DNA sequence from clone CH73-383L1 in l... 46 3.7 1
(CU855937) Zebrafish DNA sequence from clone CH1073-314H17 i... 46 3.7 1
(CU855766) Zebrafish DNA sequence from clone CH73-46G7 in li... 46 3.7 1
(CU693491) Zebrafish DNA sequence from clone CH73-239K17 in ... 46 3.7 1
(CU571403) Zebrafish DNA sequence from clone DKEY-96J1 in li... 46 3.7 1
(CU326364) Zebrafish DNA sequence from clone DKEY-174C13 in ... 46 3.7 1
(CT737148) Zebrafish DNA sequence from clone CH211-149K21 in... 46 3.7 1
(CR855313) Zebrafish DNA sequence from clone CH211-198C17 in... 46 3.7 1
(CR769763) Zebrafish DNA sequence from clone CH211-200N13 in... 46 3.7 1
(CR762497) Zebrafish DNA sequence from clone DKEY-162B3 in l... 46 3.7 1
(CR749761) Zebrafish DNA sequence from clone CH211-215F19 in... 46 3.7 1
(CR388190) Zebrafish DNA sequence from clone CH211-284E3 in ... 46 3.7 1
(BX890568) Zebrafish DNA sequence from clone DKEY-208J2 in l... 46 3.7 1
(BX678772) Zebrafish DNA sequence from clone CH211-231N5 in ... 46 3.7 1
(BX649531) Zebrafish DNA sequence from clone CH211-285L4 in ... 46 3.7 1
(BX649370) Zebrafish DNA sequence from clone DKEY-97I11 in l... 46 3.7 1
(BX465199) Zebrafish DNA sequence from clone DKEY-84I7 in li... 46 3.7 1
(BX284697) Zebrafish DNA sequence from clone DKEY-7M11 in li... 46 3.7 1
(BX248393) Zebrafish DNA sequence from clone CH211-233O13 in... 46 3.7 1
(BX088718) Zebrafish DNA sequence from clone DKEY-185E18. 46 3.7 1
(BX005350) Zebrafish DNA sequence from clone DKEY-58C8 in li... 46 3.7 1
(BX005007) Zebrafish DNA sequence from clone CH211-2K18 in l... 46 3.7 1
(BX004821) Zebrafish DNA sequence from clone CH211-171A11 in... 46 3.7 1
(BX000980) Zebrafish DNA sequence from clone CH211-136D9. 46 3.7 1
(AL954681) Zebrafish DNA sequence from clone BUSM1-84G17 in ... 46 3.7 1
(AL953858) Zebrafish DNA sequence from clone CH211-121H11 in... 46 3.7 1
(AL935202) Zebrafish DNA sequence from clone CH211-197E11 in... 46 3.7 1
(AL929493) Zebrafish DNA sequence from clone CH211-157D2. 46 3.7 1
(AL845357) Zebrafish DNA sequence from clone DKEY-202M22 in ... 46 3.7 1
(AC192104) Gallus gallus BAC clone CH261-58G10 from chromoso... 46 3.7 1
(AC191223) Gallus gallus BAC clone CH261-26B9 from chromosom... 46 3.7 1
(AC186633) Gallus gallus BAC clone CH261-115G18 from chromos... 46 3.7 1
(CT571265) Mouse DNA sequence from clone RP23-181D9 on chrom... 46 3.7 1
(AL596324) Mouse DNA sequence from clone RP23-324M14 on chro... 46 3.7 1
(AC170265) Mus musculus BAC RP23-54H4 (Roswell Park Cancer ... 46 3.7 1
(AC163636) Mus musculus BAC clone RP24-499E13 from chromosom... 46 3.7 1
(AC157610) Mus musculus chromosome 15, clone RP23-77H12, com... 46 3.7 1
(AC153622) Mus musculus 6 BAC RP23-301N17 (Roswell Park Canc... 46 3.7 1
(AC147641) Mus musculus BAC clone RP23-43L22 from 14, comple... 46 3.7 1
(AC147628) Mus musculus BAC clone RP24-476D20 from chromosom... 46 3.7 1
(AC137942) Mus musculus chromosome 10, clone RP24-502K6, com... 46 3.7 1
(AC130527) Mus musculus BAC clone RP23-56C10 from chromosome... 46 3.7 1
(AC113541) Mus musculus chromosome 5, clone RP23-185N2, comp... 46 3.7 1
(AC109214) Mus musculus chromosome 10, clone RP23-352E22, co... 46 3.7 1
(AC102569) Mus musculus chromosome 12, clone RP23-226F7, com... 46 3.7 1
(AC101848) Mus musculus chromosome 1, clone RP23-267J24, com... 46 3.7 1
(AC095558) Rattus norvegicus 18 BAC CH230-8D7 (Children's Ho... 46 3.7 1
(AC068663) Mus musculus strain C57BL6/J chromosome 5 clone R... 46 3.7 1
(AC026813) Mus musculus strain C57BL6/J chromosome 5 clone R... 46 3.7 1
(Z97341) Arabidopsis thaliana DNA chromosome 4, ESSA I FCA c... 46 3.7 1
(DQ660415) Volvox carteri f. nagariensis arylsulfatase precu... 46 3.7 1
(AM462900) Vitis vinifera contig VV78X056435.6, whole genome... 46 3.7 1
(AM455445) Vitis vinifera contig VV78X036406.3, whole genome... 46 3.7 1
(AM438657) Vitis vinifera, whole genome shotgun sequence, co... 46 3.7 1
(AL161544) Arabidopsis thaliana DNA chromosome 4, contig fra... 46 3.7 1
(AC189197) Brassica rapa subsp. pekinensis clone KBrB004L02,... 46 3.7 1
(AR552658) Sequence 7789 from patent US 6747137. 46 3.7 1
(AR552271) Sequence 7402 from patent US 6747137. 46 3.7 1
(AL929603) Trypanosoma brucei chromosome 1, complete sequence. 46 3.7 1
(AL929352) Plasmodium falciparum strain 3D7, chromosome 5, s... 46 3.7 1
(AF272150) Dictyostelium discoideum deliriumA (dlrA) gene, c... 46 3.7 1
(AC117075) Dictyostelium discoideum chromosome 2 map 5201047... 46 3.7 1
(AC091655) Trypanosoma brucei chromosome 5 clone RPCI93-3C6,... 46 3.7 1
(AC105748) Homo sapiens chromosome 3 clone RP11-532I6, compl... 46 3.7 1
(AC104302) Homo sapiens chromosome 3 clone RP11-379L20, comp... 46 3.7 1
(AC010767) Homo sapiens chromosome 17, clone RP11-188K10, co... 46 3.7 1
(AC158668) Mus musculus clone RP23-85F17, WORKING DRAFT SEQU... 46 3.7 1
(AC152101) Bos taurus clone CH240-2E22, WORKING DRAFT SEQUEN... 46 3.7 1
(AC148212) Dasypus novemcinctus clone VMRC5-288O3, WORKING D... 46 3.7 1
(AC147763) Dasypus novemcinctus clone VMRC5-141B3, WORKING D... 46 3.7 1
(AC141006) Rattus norvegicus clone CH230-527B5, WORKING DRAF... 46 3.7 1
(AC139989) Rattus norvegicus clone CH230-136H10, WORKING DRA... 46 3.7 1
(AC133278) Rattus norvegicus clone CH230-123D12, *** SEQUENC... 46 3.7 1
(AC125746) Rattus norvegicus clone CH230-137I10, *** SEQUENC... 46 3.7 1
(AC119367) Rattus norvegicus clone CH230-180E15, *** SEQUENC... 46 3.7 1
(AC119362) Rattus norvegicus clone CH230-179D4, *** SEQUENCI... 46 3.7 1
(AC112743) Rattus norvegicus clone CH230-84G22, *** SEQUENCI... 46 3.7 1
(AC111681) Rattus norvegicus clone CH230-55L9, WORKING DRAFT... 46 3.7 1
(AC103195) Rattus norvegicus clone CH230-197H5, WORKING DRAF... 46 3.7 1
(AC099212) Rattus norvegicus clone CH230-50P2, *** SEQUENCIN... 46 3.7 1
(AC097764) Rattus norvegicus clone CH230-50C11, *** SEQUENCI... 46 3.7 1
(AC095948) Rattus norvegicus clone CH230-11A21, *** SEQUENCI... 46 3.7 1
(AC094759) Rattus norvegicus clone CH230-5I18, WORKING DRAFT... 46 3.7 1
(FP236514) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 46 3.7 1
(FP236188) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 46 3.7 1
(FP102784) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 46 3.7 1
(FP067447) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 46 3.7 1
(FP017273) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 46 3.7 1
(CU914766) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 46 3.7 1
(CU467901) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 46 3.7 1
(CU041267) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 46 3.7 1
(CR974573) Mouse DNA sequence *** SEQUENCING IN PROGRESS ***... 46 3.7 1
(CR936345) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 46 3.7 1
(CR931979) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 46 3.7 1
(CR847494) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 46 3.7 1
(CR751566) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 46 3.7 1
(CR749166) Zebrafish DNA sequence *** SEQUENCING CANCELLED *... 46 3.7 1
(CR631128) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 46 3.7 1
(AC231925) Medicago truncatula chromosome 7 clone mth2-25h7,... 46 3.7 1
(AC217247) Solanum lycopersicum chromosome 12 clone LE_HBa-2... 46 3.7 1
(AC209517) Solanum tuberosum chromosome 6 clone RHPOTKEY057H... 46 3.7 1
(AC201329) Strongylocentrotus purpuratus clone R3-16M4, WORK... 46 3.7 1
(AC187451) Ornithorhynchus anatinus clone OA_Bb-476H5, WORKI... 46 3.7 1
(AC185389) Ornithorhynchus anatinus clone OA_Bb-201K17, WORK... 46 3.7 1
(AC181303) Strongylocentrotus purpuratus clone R3-4017D20, W... 46 3.7 1
(AC180788) Strongylocentrotus purpuratus clone R3-3072D5, WO... 46 3.7 1
(AC179083) Strongylocentrotus purpuratus clone R3-4009I15, W... 46 3.7 1
(AC176655) Strongylocentrotus purpuratus clone R3-3081B24, W... 46 3.7 1
(AC176491) Strongylocentrotus purpuratus clone R3-3072D1, WO... 46 3.7 1
(AC165434) Mus musculus chromosome 1 clone RP23-262C15 map 1... 46 3.7 1
(AC023488) Trypanosoma brucei chromosome unknown clone RPCI9... 46 3.7 1
(AK246791) Solanum lycopersicum cDNA, clone: FC24BB03, HTC i... 46 3.7 1
(AK139381) Mus musculus 10 days neonate cortex cDNA, RIKEN f... 46 3.7 1

>(BJ325333) Dictyostelium discoideum cDNA clone:dda13l20, 5' end,
single read.
Length = 648

Score = 1158 bits (584), Expect(2) = 0.0
Identities = 584/584 (100%)
Strand = Plus / Plus


Query: 169 aatggaattaatttcacaaaatctatttcatcaccttcagttagatatatttcaaataat 228
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 57 aatggaattaatttcacaaaatctatttcatcaccttcagttagatatatttcaaataat 116


Query: 229 agtccaacatctgaatcaccaaagatactagaatacaaaagaactagggatcaagtaata 288
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 117 agtccaacatctgaatcaccaaagatactagaatacaaaagaactagggatcaagtaata 176


Query: 289 aatgcacataatgaaaaatttagattttcaattattaatttaaccaaagcagcaaatatt 348
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 177 aatgcacataatgaaaaatttagattttcaattattaatttaaccaaagcagcaaatatt 236


Query: 349 tcaaaaacaaaacataatctatcaatttcagatgctcaattattaggtaaattaatgtct 408
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 237 tcaaaaacaaaacataatctatcaatttcagatgctcaattattaggtaaattaatgtct 296


Query: 409 ggtgtttcaatgtgtgcttcatttttatctgatgaagaaagaatctctgctcaaattatt 468
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 297 ggtgtttcaatgtgtgcttcatttttatctgatgaagaaagaatctctgctcaaattatt 356


Query: 469 tctgatattaatccaactcatatatatgcagaagcaattcatgttggagaagttagagga 528
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 357 tctgatattaatccaactcatatatatgcagaagcaattcatgttggagaagttagagga 416


Query: 529 tttttaattaatggtgatacaccaagattggagacacctgatcaagttataaatagaaaa 588
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 417 tttttaattaatggtgatacaccaagattggagacacctgatcaagttataaatagaaaa 476


Query: 589 ggtattttccaattttcaaagatattatatggtcatttaaaaccaattcaaagtgttgta 648
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 477 ggtattttccaattttcaaagatattatatggtcatttaaaaccaattcaaagtgttgta 536


Query: 649 gctgtagaggaaaaagatttaacaataacaaaagaatttcaacattattttgatcaatct 708
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 537 gctgtagaggaaaaagatttaacaataacaaaagaatttcaacattattttgatcaatct 596


Query: 709 gaacaaattccatcatttattcaattagaaactagattaaaatc 752
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 597 gaacaaattccatcatttattcaattagaaactagattaaaatc 640

Score = 48.1 bits (24), Expect(2) = 0.0
Identities = 24/24 (100%)
Strand = Plus / Plus


Query: 138 gattagattattttcaaaatctac 161
||||||||||||||||||||||||
Sbjct: 26 gattagattattttcaaaatctac 49

Lambda K H
1.37 0.711 1.31

Matrix: blastn matrix:1 -3
Number of Sequences: 102105510
Number of Hits to DB: 1,775,813,908
Number of extensions: 125745516
Number of successful extensions: 15141836
Number of sequences better than 10.0: 826
Length of query: 1432
Length of database: 101,790,757,118
Length adjustment: 24
Effective length of query: 1408
Effective length of database: 99,340,224,878
Effective search space: 139871036628224
Effective search space used: 139871036628224
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)

protein update 2009. 7.19
Homology vs Protein
Query= Contig-U02677-1 (Contig-U02677-1Q) /CSM_Contig/Contig-U02677-1Q.Seq.d
(1432 letters)

Database: nrp_B
3,236,559 sequences; 1,051,180,864 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value

AC115581_20(AC115581|pid:none) Dictyostelium discoideum chromoso... 343 7e-93
(P64401) RecName: Full=33 kDa chaperonin; AltName: Full=Heat sho... 58 7e-07
(Q8CWZ3) RecName: Full=33 kDa chaperonin; AltName: Full=Heat sho... 56 3e-06
AE014133_170(AE014133|pid:none) Streptococcus mutans UA159, comp... 56 3e-06
CP000922_64(CP000922|pid:none) Anoxybacillus flavithermus WK1, c... 55 5e-06
CP000916_1197(CP000916|pid:none) Thermotoga neapolitana DSM 4359... 54 1e-05
CP000422_1454(CP000422|pid:none) Pediococcus pentosaceus ATCC 25... 54 1e-05
(Q5M1P9) RecName: Full=33 kDa chaperonin; AltName: Full=Heat sho... 54 2e-05
(Q03MM5) RecName: Full=33 kDa chaperonin; AltName: Full=Heat sho... 54 2e-05
(Q8YAC4) RecName: Full=33 kDa chaperonin; AltName: Full=Heat sho... 53 2e-05
(A0AF21) RecName: Full=33 kDa chaperonin; AltName: Full=Heat sho... 53 2e-05
(A5IMI0) RecName: Full=33 kDa chaperonin; AltName: Full=Heat sho... 53 2e-05
(P0C0C4) RecName: Full=33 kDa chaperonin; AltName: Full=Heat sho... 53 3e-05
FM242711_221(FM242711|pid:none) Listeria monocytogenes Clip81459... 53 3e-05
U49397_7(U49397|pid:none) Streptococcus pyogenes MsmR (msmR) gen... 53 3e-05
(Q92F53) RecName: Full=33 kDa chaperonin; AltName: Full=Heat sho... 52 4e-05
(Q9X1B4) RecName: Full=33 kDa chaperonin; AltName: Full=Heat sho... 52 4e-05
(Q1JDZ8) RecName: Full=33 kDa chaperonin; AltName: Full=Heat sho... 52 5e-05
(Q2JQD7) RecName: Full=33 kDa chaperonin; AltName: Full=Heat sho... 51 9e-05
(Q17ZW5) RecName: Full=33 kDa chaperonin; AltName: Full=Heat sho... 51 1e-04
(P0C0C3) RecName: Full=33 kDa chaperonin; AltName: Full=Heat sho... 50 2e-04
(B5XJE9) RecName: Full=33 kDa chaperonin; AltName: Full=Heat sho... 50 2e-04
(Q1J8U9) RecName: Full=33 kDa chaperonin; AltName: Full=Heat sho... 50 2e-04
(Q5XE74) RecName: Full=33 kDa chaperonin; AltName: Full=Heat sho... 50 2e-04
CP001104_468(CP001104|pid:none) Eubacterium eligens ATCC 27750, ... 50 2e-04
CP000350_2620(CP000350|pid:none) Leptospira borgpetersenii serov... 50 2e-04
(Q02WK6) RecName: Full=33 kDa chaperonin; AltName: Full=Heat sho... 50 2e-04
CP000348_64(CP000348|pid:none) Leptospira borgpetersenii serovar... 50 2e-04
CR543861_366(CR543861|pid:none) Acinetobacter sp. ADP1 complete ... 50 3e-04
(A2RN83) RecName: Full=33 kDa chaperonin; AltName: Full=Heat sho... 50 3e-04
AE005176_1959(AE005176|pid:none) Lactococcus lactis subsp. lacti... 49 5e-04
(P37565) RecName: Full=33 kDa chaperonin; AltName: Full=Heat sho... 49 6e-04
AM946015_140(AM946015|pid:none) Streptococcus uberis 0140J compl... 48 8e-04
AF467001_5(AF467001|pid:none) Listeria monocytogenes YabR-like p... 48 8e-04
(Q2JLK3) RecName: Full=33 kDa chaperonin; AltName: Full=Heat sho... 48 0.001
(Q9F984) RecName: Full=33 kDa chaperonin; AltName: Full=Heat sho... 47 0.001
(Q5SJV8) RecName: Full=33 kDa chaperonin; AltName: Full=Heat sho... 47 0.002
(A9NE10) RecName: Full=33 kDa chaperonin; AltName: Full=Heat sho... 47 0.002
CP001251_989(CP001251|pid:none) Dictyoglomus turgidum DSM 6724, ... 47 0.002
CP000557_64(CP000557|pid:none) Geobacillus thermodenitrificans N... 46 0.003
(A8F938) RecName: Full=33 kDa chaperonin; AltName: Full=Heat sho... 46 0.004
AP008937_222(AP008937|pid:none) Lactobacillus fermentum IFO 3956... 46 0.004
CP000413_269(CP000413|pid:none) Lactobacillus gasseri ATCC 33323... 46 0.004
(A7Z0J4) RecName: Full=33 kDa chaperonin; AltName: Full=Heat sho... 45 0.005
(Q74L99) RecName: Full=33 kDa chaperonin; AltName: Full=Heat sho... 45 0.005
(A3DGJ4) RecName: Full=33 kDa chaperonin; AltName: Full=Heat sho... 45 0.007
(Q88Z30) RecName: Full=33 kDa chaperonin; AltName: Full=Heat sho... 45 0.007
DQ489736_1415(DQ489736|pid:none) Leuconostoc citreum KM20, compl... 45 0.009
AE010300_37(AE010300|pid:none) Leptospira interrogans serovar la... 44 0.011
(Q3A7V6) RecName: Full=33 kDa chaperonin; AltName: Full=Heat sho... 44 0.015
CP001033_2156(CP001033|pid:none) Streptococcus pneumoniae CGSP14... 44 0.015
AE009951_105(AE009951|pid:none) Fusobacterium nucleatum subsp. n... 44 0.019
AP009484_1903(AP009484|pid:none) Macrococcus caseolyticus JCSC54... 43 0.025
CP000863_378(CP000863|pid:none) Acinetobacter baumannii ACICU, c... 43 0.025
(Q49V21) RecName: Full=33 kDa chaperonin; AltName: Full=Heat sho... 43 0.025
(Q31BL9) RecName: Full=33 kDa chaperonin; AltName: Full=Heat sho... 43 0.032
(Q839B0) RecName: Full=33 kDa chaperonin; AltName: Full=Heat sho... 43 0.032
CP000878_776(CP000878|pid:none) Prochlorococcus marinus str. MIT... 43 0.032
(A2BVY6) RecName: Full=33 kDa chaperonin; AltName: Full=Heat sho... 42 0.042
(A2BQE5) RecName: Full=33 kDa chaperonin; AltName: Full=Heat sho... 42 0.042
AM494967_171(AM494967|pid:none) Leishmania braziliensis chromoso... 42 0.042
CP001182_436(CP001182|pid:none) Acinetobacter baumannii AB0057, ... 42 0.072
CP000521_348(CP000521|pid:none) Acinetobacter baumannii ATCC 179... 41 0.095
CP001615_1665(CP001615|pid:none) Exiguobacterium sp. AT1b, compl... 41 0.095
AM942759_2991(AM942759|pid:none) Proteus mirabilis strain HI4320... 41 0.095
CP001348_2806(CP001348|pid:none) Clostridium cellulolyticum H10,... 41 0.12
(Q47VD1) RecName: Full=33 kDa chaperonin; AltName: Full=Heat sho... 41 0.12
CU468230_3007(CU468230|pid:none) Acinetobacter baumannii str. SD... 40 0.16
CP000777_25(CP000777|pid:none) Leptospira biflexa serovar Patoc ... 40 0.16
CP001098_1055(CP001098|pid:none) Halothermothrix orenii H 168, c... 40 0.21
CP000113_1047(CP000113|pid:none) Myxococcus xanthus DK 1622, com... 40 0.21
CP001281_1982(CP001281|pid:none) Thauera sp. MZ1T, complete geno... 40 0.21
AP008955_168(AP008955|pid:none) Brevibacillus brevis NBRC 100599... 40 0.21
(A3PC66) RecName: Full=33 kDa chaperonin; AltName: Full=Heat sho... 39 0.36
CP000930_2077(CP000930|pid:none) Heliobacterium modesticaldum Ic... 39 0.36
(Q7NA46) RecName: Full=33 kDa chaperonin; AltName: Full=Heat sho... 39 0.36
(A8AZN1) RecName: Full=33 kDa chaperonin; AltName: Full=Heat sho... 39 0.47
(A8G434) RecName: Full=33 kDa chaperonin; AltName: Full=Heat sho... 39 0.47
(B5YJH3) RecName: Full=33 kDa chaperonin; AltName: Full=Heat sho... 39 0.47
(Q8CXP5) RecName: Full=33 kDa chaperonin; AltName: Full=Heat sho... 39 0.47
CP000817_2831(CP000817|pid:none) Lysinibacillus sphaericus C3-41... 39 0.61
AP008971_803(AP008971|pid:none) Finegoldia magna ATCC 29328 DNA,... 39 0.61
CP000697_349(CP000697|pid:none) Acidiphilium cryptum JF-5, compl... 38 0.80
AE017226_2535(AE017226|pid:none) Treponema denticola ATCC 35405,... 38 0.80
AM778957_26(AM778957|pid:none) Microcystis aeruginosa PCC 7806 g... 38 0.80
(A3QJ40) RecName: Full=33 kDa chaperonin; AltName: Full=Heat sho... 38 0.80
CP001562_99(CP001562|pid:none) Bartonella grahamii as4aup, compl... 38 1.0
AE016828_1267(AE016828|pid:none) Coxiella burnetii RSA 493, comp... 37 1.4
CP000890_1409(CP000890|pid:none) Coxiella burnetii RSA 331, comp... 37 1.4
CP001020_1504(CP001020|pid:none) Coxiella burnetii CbuK_Q154, co... 37 1.4
FM204884_1852(FM204884|pid:none) Streptococcus equi subsp. zooep... 37 1.4
CP001107_1306(CP001107|pid:none) Eubacterium rectale ATCC 33656,... 37 1.4
(Q4L3H0) RecName: Full=33 kDa chaperonin; AltName: Full=Heat sho... 37 1.8
CP000510_93(CP000510|pid:none) Psychromonas ingrahamii 37, compl... 37 1.8
(Q034W5) RecName: Full=33 kDa chaperonin; AltName: Full=Heat sho... 37 2.3
(Q3AC32) RecName: Full=33 kDa chaperonin; AltName: Full=Heat sho... 37 2.3
CP000497_224(CP000497|pid:none) Pichia stipitis CBS 6054 chromos... 37 2.3
(Q3AXM7) RecName: Full=33 kDa chaperonin; AltName: Full=Heat sho... 37 2.3
AP009049_2843(AP009049|pid:none) Clostridium kluyveri NBRC 12016... 37 2.3
(P56925) RecName: Full=33 kDa chaperonin; AltName: Full=Heat sho... 37 2.3
CP000673_3149(CP000673|pid:none) Clostridium kluyveri DSM 555, c... 37 2.3
CP001393_704(CP001393|pid:none) Anaerocellum thermophilum DSM 67... 37 2.3
AM502248_201(AM502248|pid:none) Leishmania infantum chromosome 30. 36 3.0
CP000806_4077(CP000806|pid:none) Cyanothece sp. ATCC 51142 circu... 36 3.0
AM295250_161(AM295250|pid:none) Staphylococcus carnosus subsp. c... 36 3.0
AM260525_103(AM260525|pid:none) Bartonella tribocorum CIP 105476... 36 3.0
(A9KTE0) RecName: Full=33 kDa chaperonin; AltName: Full=Heat sho... 36 3.0
CP000507_165(CP000507|pid:none) Shewanella amazonensis SB2B, com... 36 4.0
(Q5WLV4) RecName: Full=33 kDa chaperonin; AltName: Full=Heat sho... 36 4.0
(Q5FMA2) RecName: Full=33 kDa chaperonin; AltName: Full=Heat sho... 36 4.0
(Q15ZC9) RecName: Full=33 kDa chaperonin; AltName: Full=Heat sho... 36 4.0
(A6QEG4) RecName: Full=33 kDa chaperonin; AltName: Full=Heat sho... 36 4.0
CP001083_3279(CP001083|pid:none) Clostridium botulinum Ba4 str. ... 36 4.0
CP001129_1772(CP001129|pid:none) Streptococcus equi subsp. zooep... 36 4.0
BX293980_31(BX293980|pid:none) Mycoplasma mycoides subsp. mycoid... 35 5.2
(A9VN80) RecName: Full=33 kDa chaperonin; AltName: Full=Heat sho... 35 6.8
(Q46LN9) RecName: Full=33 kDa chaperonin; AltName: Full=Heat sho... 35 6.8
CP001016_151(CP001016|pid:none) Beijerinckia indica subsp. indic... 35 6.8
AE013598_1782(AE013598|pid:none) Xanthomonas oryzae pv. oryzae K... 35 6.8
(Q7NIA2) RecName: Full=33 kDa chaperonin; AltName: Full=Heat sho... 35 6.8
(A2C1C0) RecName: Full=33 kDa chaperonin; AltName: Full=Heat sho... 35 8.8
(A5IQ65) RecName: Full=33 kDa chaperonin; AltName: Full=Heat sho... 35 8.8
(A5GTZ1) RecName: Full=33 kDa chaperonin; AltName: Full=Heat sho... 35 8.8
CP000359_549(CP000359|pid:none) Deinococcus geothermalis DSM 113... 35 8.8
CP000962_3127(CP000962|pid:none) Clostridium botulinum A3 str. L... 35 8.8

>AC115581_20(AC115581|pid:none) Dictyostelium discoideum chromosome
2 map complement(3527391-3470188) strain AX4, complete
sequence.
Length = 397

Score = 343 bits (881), Expect = 7e-93
Identities = 182/206 (88%), Positives = 182/206 (88%)
Frame = +1

Query: 136 MIRLFSKSTFFNGINFTKSISSPSVRYISNNSPTSESPKILEYKRTRDQVINAHNEKFRF 315
MIRLFSKSTFFNGINFTKSISSPSVRYISNNSPTSESPKILEYK T
Sbjct: 1 MIRLFSKSTFFNGINFTKSISSPSVRYISNNSPTSESPKILEYKVT-------------- 46

Query: 316 SIINLTKAANISKTKHNLSISDAQLLGKLMSGVSMCASFLSDEERISAQIISDINPTHIY 495
AN SKTKHNLSISDAQLLGKLMSGVSMCASFLSDEERISAQIISDINPTHIY
Sbjct: 47 --------ANFSKTKHNLSISDAQLLGKLMSGVSMCASFLSDEERISAQIISDINPTHIY 98

Query: 496 AEAIHVGEVRGFLINGDTPRLETPDQVINRKGIFQFSKILYGHLKPIQSVVAVEEKDLTI 675
AEAIHVGEVRGFLINGDTPRLETPDQVINRKGIFQFSKILYGHLKPIQSVVAVEEKDLTI
Sbjct: 99 AEAIHVGEVRGFLINGDTPRLETPDQVINRKGIFQFSKILYGHLKPIQSVVAVEEKDLTI 158

Query: 676 TKEFQHYFDQSEQIPSFIQLETRLKS 753
TKEFQHYFDQSEQIPSFIQLETRLKS
Sbjct: 159 TKEFQHYFDQSEQIPSFIQLETRLKS 184

Score = 228 bits (581), Expect = 4e-58
Identities = 111/125 (88%), Positives = 111/125 (88%)
Frame = +2

Query: 911 LEFNGGILIQTLPSTTDEELVQLKNNIEKHSIADLFXXXXXXXXXXXXXXTNNDPSVEII 1090
LEFNGGILIQTLPSTTDEELVQLKNNIEKHSIADLF TNNDPSVEII
Sbjct: 237 LEFNGGILIQTLPSTTDEELVQLKNNIEKHSIADLFLKEKKSIKEILSILTNNDPSVEII 296

Query: 1091 STIFVDFYCRCTLKTFKDKILTLGINEIKHLEEHNHNELKCIYCNRYHYLKDTDFKEMIN 1270
STIFVDFYCRCTLKTFKDKILTLGINEIKHLEEHNHNELKCIYCNRYHYLKDTDFKEMIN
Sbjct: 297 STIFVDFYCRCTLKTFKDKILTLGINEIKHLEEHNHNELKCIYCNRYHYLKDTDFKEMIN 356

Query: 1271 HLEQD 1285
HLEQD
Sbjct: 357 HLEQD 361

Lambda K H
0.318 0.134 0.401

Gapped
Lambda K H
0.267 0.0410 0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3236559
Number of Hits to DB: 1,416,967,237
Number of extensions: 22507975
Number of successful extensions: 61697
Number of sequences better than 10.0: 125
Number of HSP's gapped: 61605
Number of HSP's successfully gapped: 158
Length of query: 477
Length of database: 1,051,180,864
Length adjustment: 132
Effective length of query: 345
Effective length of database: 623,955,076
Effective search space: 215264501220
Effective search space used: 215264501220
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)

PSORT

psg: 0.55 gvh: 0.17 alm: 0.41 top: 0.53 tms: 0.00 mit: 0.19 mip: 0.00
nuc: 0.00 erl: 0.00 erm: 0.40 pox: 0.00 px2: 0.00 vac: 0.00 rnp: 0.00
act: 0.00 caa: 0.00 yqr: 0.00 tyr: 0.00 leu: 0.00 gpi: 0.00 myr: 0.00
dna: 0.00 rib: 0.00 bac: 0.00 m1a: 0.00 m1b: 0.00 m2 : 0.00 mNt: 0.00
m3a: 0.00 m3b: 0.00 m_ : 1.00

48.0 %: nuclear
36.0 %: cytoplasmic
8.0 %: cytoskeletal
8.0 %: mitochondrial

>> prediction for Contig-U02677-1 is nuc

VS (DIR, S) 0
VH (FL, L) 0
VF (FL, S) 0
AH (FL, L) 0
AF (FL, S) 4
SL (DIR, L) 0
SS (DIR, S) 0
SH (FL, L) 0
SF (FL, S) 4
CH (FL, L) 0
CF (FL, S) 2
FCL (DIR, L) 0
FC (DIR, S) 0
FC-IC (SUB) 0