Contig-U00653-1
Contig ID Contig-U00653-1
Contig update 2001. 8.29
Contig sequence
>Contig-U00653-1 (Contig-U00653-1Q) /CSM_Contig/Contig-U00653-1Q.Seq.d
TAAAAATTGGCAAAGGAAAATAAAAAAAATATTTTATATTTTCATAAAAA
ATAAAANNANCAAAACANNAATAAAATAAAACAAAACAAAATAAAACAAA
ACANTTACTTTACTAAATGTAAATAAAAAATATTTTATTTTTATTAATCC
ATAATAAAATTAAAAATATCTTTTTTATATTTTTTTATTTTTTTTTATAT
TTAAAAATATAAATACCATATATATACATATCTAAAATGATAAAATCAAT
TTTATCATTACAAAATTTTAAATTTATAAAACCTTGTACAAATTCATCAA
TTTTAAAATATAATAATAATAATAATACTAATAATAATAATAATAATAAT
GGTATAAATAAATATAATAGTACATTTAATAATAATAATTCAAATTTTTN
AAATAANNNNTTTATTTTCATCAAAACAATNTCAACANCNATCTATTT--
--------GGTTGTGTTATAAATGATATGGCTGATTATAAATTTGATTCA
AAAGTTGAACGTACAAAAACTAGACCAATAGCTTCAAAACAATTAACTCA
TAAACAAAGTTTAATATTTTTAGGTGGTCAATTATTAGCTTCTTTTGGTT
TAATTTTATCAAGTTTAAATTATTATACTATTGCATTATGTGCATCATCA
TTACCAATTGTGGTATTGTATCCATTTATGAAAAGATTTACATATTATCC
ACAATTTGTATTAGGATTAGCATTTAATTGGGGAGCATTGGCTGGATATT
CAGCGATTGCAGGATCATGTAATTGGTCAATCGTTGCACCATTATATTTG
GCAGGTATTAGTTGGACGATGGTTTATGATACAATCTATGCACATCAAGA
TAAAAGGGATGATATTTTAGTTGGTGTTAAATCTACTGCATTGAAATTTG
CAGAAAAGAGTCGTATTATTTTATCAGTTTTCTCTGGTCTAGTTATATCT
GGTATGTTTTTAACTGGTATCGCTGCAAATATGCCATTGTTTTATTATTT
GGGTACTGCTGCTTGTAGTAGTCATTTAATTTGGCAATTGAAAACTGTAG
ATTTCAATAATCCTTCCTCTTGTCTTGAAAAATTCATTTCCAATAAGAAT
TTCGGTCTTTATTTCCTTTTAATCATTATAGTTTCAAAATTATTACAAGA
TAAAGAAAATGAAAATGAAATTCAAAAAAAAATAAAACTTTATCTATTGA
ATAAATAAATAAAAAATAAATAAAATAATA

Gap gap included
Contig length 1220
Chromosome number (1..6, M) 3
Chromosome length 6358359
Start point 4251994
End point 4253414
Strand (PLUS/MINUS) PLUS
Number of clones 2
Number of EST 3
Link to clone list U00653
List of clone(s)

est1=AFO463F,1,449
est2=AFO463Z,450,1412
est3=SSI153Z,1077,1420
Translated Amino Acid sequence
kigkgk*kkyfifs*kikxxkxx*nktkqnktkxlly*m*iknilfllihnkikniffif
fyfflylki*IPYIYISKMIKSILSLQNFKFIKPCTNSSILKYNNNNNTNNNNNNNGINK
YNSTFNNNNSNFXNXXFIFIKTXSTXIY---

---GCVINDMADYKFDSKVERTKTRPIASKQLTHKQSLIFLGGQLLASFGLILSSLNYYT
IALCASSLPIVVLYPFMKRFTYYPQFVLGLAFNWGALAGYSAIAGSCNWSIVAPLYLAGI
SWTMVYDTIYAHQDKRDDILVGVKSTALKFAEKSRIILSVFSGLVISGMFLTGIAANMPL
FYYLGTAACSSHLIWQLKTVDFNNPSSCLEKFISNKNFGLYFLLIIIVSKLLQDKENENE
IQKKIKLYLLNK*iknk*nn


Translated Amino Acid sequence (All Frames)
Frame A:
*klakenkknilyfhkk*xxqnxnkikqnkikqnxyftkck*kifyfy*siiklkisfly
ffiffyi*kykyhiytylk**nqfyhykilnl*nlvqihqf*niiiiiiliiiiiimv*i
niivhliiiiqifxixxlfsskqxqxxsi---

---GCVINDMADYKFDSKVERTKTRPIASKQLTHKQSLIFLGGQLLASFGLILSSLNYYT
IALCASSLPIVVLYPFMKRFTYYPQFVLGLAFNWGALAGYSAIAGSCNWSIVAPLYLAGI
SWTMVYDTIYAHQDKRDDILVGVKSTALKFAEKSRIILSVFSGLVISGMFLTGIAANMPL
FYYLGTAACSSHLIWQLKTVDFNNPSSCLEKFISNKNFGLYFLLIIIVSKLLQDKENENE
IQKKIKLYLLNK*iknk*nn

Frame B:
knwqrkikkifyifiknkxxktxik*nktk*nktxtllnvnkkyfifinp**n*kylfyi
flfffifknintiyihi*ndkinfiitkf*iyktlykfinfki*****y*******wyk*
i**yi****fkfxk*xxyfhqnnxnxxlf---

---vvl*miwliinliqklnvqkldq*lqnn*linkv*yf*vvny*lllv*fyqv*iiil
lhyvhhhyqlwycihl*kdlhiihnly*d*hligehwldiqrlqdhvigqslhhyiwqvl
vgrwfmiqsmhikikgmif*lvlnllh*nlqkrvvlfyqfslv*lylvcf*lvslqichc
fiiwvlllvvvi*fgn*kl*isiilplvlknsfpirisvfisf*sl*fqnyykikkmkmk
fkkk*nfiy*ink*kinkii

Frame C:
kigkgk*kkyfifs*kikxxkxx*nktkqnktkxlly*m*iknilfllihnkikniffif
fyfflylki*IPYIYISKMIKSILSLQNFKFIKPCTNSSILKYNNNNNTNNNNNNNGINK
YNSTFNNNNSNFXNXXFIFIKTXSTXIY---

---lcyk*yg*l*i*fks*tykn*tnsfktins*tkfnifrwsiisffwfnfikfkllyy
cimciiitncgivsiyekiyilsticirisi*lgsigwifsdcrim*lvnrctiifgry*
lddgl*ynlctsr*kg*yfswc*iycieicrkesyyfisflwssyiwyvfnwyrckyaiv
llfgyccl**sfnlaiencrfq*sflls*kihfq*efrslfpfnhysfkiitr*rk*k*n
skknktlsie*inkk*ik*

own update 2004. 6.21
Homology vs CSM-cDNA
Query= Contig-U00653-1 (Contig-U00653-1Q)
/CSM_Contig/Contig-U00653-1Q.Seq.d
(1230 letters)

Database: CSM
8402 sequences; 8,075,542 total letters


Score E
Sequences producing significant alignments: (bits) Value

Contig-U00653-1 (Contig-U00653-1Q) /CSM_Contig/Conti... 1400 0.0
Contig-U16288-1 (Contig-U16288-1Q) /CSM_Contig/Conti... 40 0.008
Contig-U14277-1 (Contig-U14277-1Q) /CSM_Contig/Conti... 40 0.008
Contig-U10389-1 (Contig-U10389-1Q) /CSM_Contig/Conti... 38 0.031
Contig-U04563-1 (Contig-U04563-1Q) /CSM_Contig/Conti... 38 0.031
Contig-U14865-1 (Contig-U14865-1Q) /CSM_Contig/Conti... 36 0.12
Contig-U12064-1 (Contig-U12064-1Q) /CSM_Contig/Conti... 36 0.12
Contig-U09576-1 (Contig-U09576-1Q) /CSM_Contig/Conti... 36 0.12
Contig-U08797-1 (Contig-U08797-1Q) /CSM_Contig/Conti... 36 0.12
Contig-U07096-1 (Contig-U07096-1Q) /CSM_Contig/Conti... 36 0.12

>Contig-U00653-1 (Contig-U00653-1Q) /CSM_Contig/Contig-U00653-1Q.Seq.d
Length = 1230

Score = 1400 bits (706), Expect = 0.0
Identities = 745/745 (100%)
Strand = Plus / Plus


Query: 411 tttattttcatcaaaacaatntcaacancnatctatttnnnnnnnnnnggttgtgttata 470
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 411 tttattttcatcaaaacaatntcaacancnatctatttnnnnnnnnnnggttgtgttata 470


Query: 471 aatgatatggctgattataaatttgattcaaaagttgaacgtacaaaaactagaccaata 530
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 471 aatgatatggctgattataaatttgattcaaaagttgaacgtacaaaaactagaccaata 530


Query: 531 gcttcaaaacaattaactcataaacaaagtttaatatttttaggtggtcaattattagct 590
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 531 gcttcaaaacaattaactcataaacaaagtttaatatttttaggtggtcaattattagct 590


Query: 591 tcttttggtttaattttatcaagtttaaattattatactattgcattatgtgcatcatca 650
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 591 tcttttggtttaattttatcaagtttaaattattatactattgcattatgtgcatcatca 650


Query: 651 ttaccaattgtggtattgtatccatttatgaaaagatttacatattatccacaatttgta 710
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 651 ttaccaattgtggtattgtatccatttatgaaaagatttacatattatccacaatttgta 710


Query: 711 ttaggattagcatttaattggggagcattggctggatattcagcgattgcaggatcatgt 770
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 711 ttaggattagcatttaattggggagcattggctggatattcagcgattgcaggatcatgt 770


Query: 771 aattggtcaatcgttgcaccattatatttggcaggtattagttggacgatggtttatgat 830
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 771 aattggtcaatcgttgcaccattatatttggcaggtattagttggacgatggtttatgat 830


Query: 831 acaatctatgcacatcaagataaaagggatgatattttagttggtgttaaatctactgca 890
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 831 acaatctatgcacatcaagataaaagggatgatattttagttggtgttaaatctactgca 890


Query: 891 ttgaaatttgcagaaaagagtcgtattattttatcagttttctctggtctagttatatct 950
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 891 ttgaaatttgcagaaaagagtcgtattattttatcagttttctctggtctagttatatct 950


Query: 951 ggtatgtttttaactggtatcgctgcaaatatgccattgttttattatttgggtactgct 1010
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 951 ggtatgtttttaactggtatcgctgcaaatatgccattgttttattatttgggtactgct 1010


Query: 1011 gcttgtagtagtcatttaatttggcaattgaaaactgtagatttcaataatccttcctct 1070
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1011 gcttgtagtagtcatttaatttggcaattgaaaactgtagatttcaataatccttcctct 1070


Query: 1071 tgtcttgaaaaattcatttccaataagaatttcggtctttatttccttttaatcattata 1130
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1071 tgtcttgaaaaattcatttccaataagaatttcggtctttatttccttttaatcattata 1130


Query: 1131 gtttcaaaattattacaagataaag 1155
|||||||||||||||||||||||||
Sbjct: 1131 gtttcaaaattattacaagataaag 1155


Score = 101 bits (51), Expect = 3e-21
Identities = 51/51 (100%)
Strand = Plus / Plus


Query: 256 cattacaaaattttaaatttataaaaccttgtacaaattcatcaattttaa 306
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 256 cattacaaaattttaaatttataaaaccttgtacaaattcatcaattttaa 306


Score = 83.8 bits (42), Expect = 6e-16
Identities = 42/42 (100%)
Strand = Plus / Plus


Query: 129 aatattttatttttattaatccataataaaattaaaaatatc 170
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 129 aatattttatttttattaatccataataaaattaaaaatatc 170


>Contig-U16288-1 (Contig-U16288-1Q) /CSM_Contig/Contig-U16288-1Q.Seq.d
Length = 840

Score = 40.1 bits (20), Expect = 0.008
Identities = 20/20 (100%)
Strand = Plus / Plus


Query: 866 tttagttggtgttaaatcta 885
||||||||||||||||||||
Sbjct: 482 tttagttggtgttaaatcta 501


>Contig-U14277-1 (Contig-U14277-1Q) /CSM_Contig/Contig-U14277-1Q.Seq.d
Length = 1224

Score = 40.1 bits (20), Expect = 0.008
Identities = 20/20 (100%)
Strand = Plus / Plus


Query: 919 ttttatcagttttctctggt 938
||||||||||||||||||||
Sbjct: 743 ttttatcagttttctctggt 762


Score = 32.2 bits (16), Expect = 1.9
Identities = 16/16 (100%)
Strand = Plus / Minus


Query: 131 tattttatttttatta 146
||||||||||||||||
Sbjct: 1219 tattttatttttatta 1204


Database: CSM
Posted date: Jun 21, 2004 12:56 PM
Number of letters in database: 8,075,542
Number of sequences in database: 8402

Lambda K H
1.37 0.711 1.31

Gapped
Lambda K H
1.37 0.711 1.31


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 30,544
Number of Sequences: 8402
Number of extensions: 30544
Number of successful extensions: 4490
Number of sequences better than 10.0: 498
length of query: 1230
length of database: 8,075,542
effective HSP length: 16
effective length of query: 1214
effective length of database: 7,941,110
effective search space: 9640507540
effective search space used: 9640507540
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 15 (30.2 bits)
dna update 2009. 4.18
Homology vs DNA
Query= Contig-U00653-1 (Contig-U00653-1Q) /CSM_Contig/Contig-U00653-1Q.Seq.d
(1230 letters)

Database: ddbj_A
102,105,510 sequences; 101,790,757,118 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value N

(BJ345976) Dictyostelium discoideum cDNA clone:dda29n16, 3' ... 1368 0.0 1
(BJ347618) Dictyostelium discoideum cDNA clone:dda27k14, 3' ... 1328 0.0 1
(C90153) Dictyostelium discoideum slug cDNA, clone SSI153. 521 e-143 1
(DY264372) IC0AAA14BE01RM1 CitNFL Citrus clementina cDNA 5',... 52 8e-11 2
(AB055079) Lithospermum erythrorhizon lepgt-2 mRNA, complete... 56 2e-07 2
(AB055078) Lithospermum erythrorhizon lepgt-1 mRNA, complete... 56 6e-07 2
(DW224449) GH_HYPS_01-01-10R_E03_InvR_14Apr04_023_R Stem - 7... 68 9e-07 1
(CU503833) Theobroma cacao, mRNA sequence (KZ0ACAK5YK22FM1). 68 9e-07 1
(CO074948) GR__Ea35F12.f GR__Ea Gossypium raimondii cDNA clo... 68 9e-07 1
(DY273682) IC0AAA34CE03RM1 CitNFL Citrus clementina cDNA 5',... 46 1e-06 2
(FC901972) IC0AAA34CE03RM1 IVIA1 Citrus clementina cDNA clon... 46 1e-06 2
(DY276248) IC0AAA40CE11RM1 CitNFL Citrus clementina cDNA 5',... 44 4e-06 2
(DY264781) IC0AAA15CA07RM1 CitNFL Citrus clementina cDNA 5',... 44 4e-06 2
(DY273310) IC0AAA33CD02RM1 CitNFL Citrus clementina cDNA 5',... 44 4e-06 2
(FC892086) IC0AAA41CD03RM1 IVIA1 Citrus clementina cDNA clon... 44 4e-06 2
(FC877882) IC0AAA15CA07RM1 IVIA1 Citrus clementina cDNA clon... 44 4e-06 2
(DY277503) IC0AAA44AC03RM1 CitNFL Citrus clementina cDNA 5',... 64 1e-05 1
(DQ397513) Arnebia euchroma geranyl diphosphate:4-hydroxyben... 50 3e-05 2
(DY265618) IC0AAA17DD05RM1 CitNFL Citrus clementina cDNA 5',... 44 5e-05 2
(EJ574945) 1092960089414 Global-Ocean-Sampling_GS-29-01-01-1... 40 5e-05 2
(EK410182) 1095505158462 Global-Ocean-Sampling_GS-31-01-01-1... 48 4e-04 2
(DY284351) IC0AAA61AE09RM1 CitNFL Citrus clementina cDNA 5',... 44 8e-04 2
(BJ330177) Dictyostelium discoideum cDNA clone:dda27k14, 5' ... 58 8e-04 1
(BJ328824) Dictyostelium discoideum cDNA clone:dda29n16, 5' ... 58 8e-04 1
(GH605995) G1297P557FG4.T0 C. parvum KSU-1 normalized sporoz... 50 9e-04 3
(EK050463) 1092959695113 Global-Ocean-Sampling_GS-31-01-01-1... 52 0.001 2
(DY269709) IC0AAA27CG08RM1 CitNFL Citrus clementina cDNA 5',... 44 0.003 2
(BJ059744) Xenopus laevis cDNA clone:XL063k17, 5' end, singl... 40 0.007 3
(CK149901) CsmgEST00528 Culicoides sonorensis female serum-f... 52 0.010 2
(FC909379) IC0AAA40CE11RM1 IVIA1 Citrus clementina cDNA clon... 44 0.011 2
(FG293583) 1108770679029 New World Screwworm Larvae 9387 EST... 54 0.013 1
(ER536423) 1093015851147 Global-Ocean-Sampling_GS-35-01-01-1... 40 0.013 2
(EG654256) AGENCOURT_90889043 NICHD_XGC_tropInt_62 Xenopus (... 42 0.014 3
(DT043744) Mdrtp1010O19.g1 Apple_EST_Mdrtp Malus x domestica... 40 0.042 2
(EK016189) 1092955235206 Global-Ocean-Sampling_GS-31-01-01-1... 44 0.048 3
(EK242395) 1095460237951 Global-Ocean-Sampling_GS-31-01-01-1... 52 0.052 1
(EK183251) 1095458132857 Global-Ocean-Sampling_GS-31-01-01-1... 52 0.052 1
(EK052819) 1092959720935 Global-Ocean-Sampling_GS-31-01-01-1... 52 0.052 1
(EK052100) 1092959713831 Global-Ocean-Sampling_GS-31-01-01-1... 52 0.052 1
(EJ829300) 1093017575394 Global-Ocean-Sampling_GS-30-02-01-1... 52 0.052 1
(EJ796044) 1093017401386 Global-Ocean-Sampling_GS-30-02-01-1... 52 0.052 1
(EJ791734) 1093017380689 Global-Ocean-Sampling_GS-30-02-01-1... 52 0.052 1
(EJ719380) 1092959442404 Global-Ocean-Sampling_GS-30-02-01-1... 52 0.052 1
(EJ712899) 1092956089799 Global-Ocean-Sampling_GS-30-02-01-1... 52 0.052 1
(EJ335436) 1092963474280 Global-Ocean-Sampling_GS-28-01-01-1... 52 0.052 1
(EK186568) 1095458155273 Global-Ocean-Sampling_GS-31-01-01-1... 44 0.053 3
(GH586854) G1297P514RJ13.T0 C. parvum KSU-1 normalized sporo... 50 0.060 2
(GH605051) G1297P552RO8.T0 C. parvum KSU-1 normalized sporoz... 50 0.064 2
(GH583455) G1297P51RJ7.T0 C. parvum KSU-1 normalized sporozo... 50 0.065 2
(GH609957) G1297P564RO12.T0 C. parvum KSU-1 normalized sporo... 50 0.065 2
(GH606415) G1297P557RN7.T0 C. parvum KSU-1 normalized sporoz... 50 0.066 2
(GH605684) G1297P554RM8.T0 C. parvum KSU-1 normalized sporoz... 50 0.066 2
(DQ021446) Daktulosphaira vitifoliae mitochondrion, partial ... 46 0.12 3
(EJ182633) 1092344133259 Global-Ocean-Sampling_GS-27-01-01-1... 44 0.14 3
(EK072048) 1092961001268 Global-Ocean-Sampling_GS-31-01-01-1... 40 0.16 2
(ER341601) 1092344349278 Global-Ocean-Sampling_GS-34-01-01-1... 40 0.16 2
(EW997453) ZBA4331 BgSSH (S-R) schistosome-exposed NHM 1742 ... 40 0.16 2
(AR548561) Sequence 3692 from patent US 6747137. 50 0.21 1
(CR382398) Plasmodium falciparum chromosome 6, complete sequ... 50 0.21 1
(EK321510) 1095462430744 Global-Ocean-Sampling_GS-31-01-01-1... 50 0.21 1
(EJ760877) 1092963129777 Global-Ocean-Sampling_GS-30-02-01-1... 42 0.25 2
(EJ731852) 1092960183588 Global-Ocean-Sampling_GS-30-02-01-1... 42 0.28 2
(EK201388) 1095460057666 Global-Ocean-Sampling_GS-31-01-01-1... 36 0.58 2
(EK071494) 1092960196117 Global-Ocean-Sampling_GS-31-01-01-1... 36 0.63 2
(EK427972) 1095516053791 Global-Ocean-Sampling_GS-31-01-01-1... 48 0.81 1
(EK343039) 1095467075840 Global-Ocean-Sampling_GS-31-01-01-1... 48 0.81 1
(EK300541) 1095462363443 Global-Ocean-Sampling_GS-31-01-01-1... 48 0.81 1
(EK002837) 1093030514193 Global-Ocean-Sampling_GS-30-02-01-1... 48 0.81 1
(EJ772238) 1092970404220 Global-Ocean-Sampling_GS-30-02-01-1... 48 0.81 1
(EJ703268) 1092956044712 Global-Ocean-Sampling_GS-30-02-01-1... 48 0.81 1
(EJ657697) 1092955012223 Global-Ocean-Sampling_GS-30-02-01-1... 48 0.81 1
(EJ435643) 1093015278812 Global-Ocean-Sampling_GS-28-01-01-1... 48 0.81 1
(EJ340685) 1092963514029 Global-Ocean-Sampling_GS-28-01-01-1... 48 0.81 1
(EJ324379) 1095403574727 Global-Ocean-Sampling_GS-27-01-01-1... 48 0.81 1
(EJ290113) 1095372002287 Global-Ocean-Sampling_GS-27-01-01-1... 48 0.81 1
(EJ210195) 1092345450035 Global-Ocean-Sampling_GS-27-01-01-1... 48 0.81 1
(EJ123177) 1092343382550 Global-Ocean-Sampling_GS-27-01-01-1... 48 0.81 1
(BI451298) kx22d02.y1 Parastrongyloides trichosuri FL pAMP1 ... 48 0.81 1
(GO136448) CAGA27087.rev CAGA Alvinella pompejana Normalized... 48 0.81 1
(FM250662) Caenorhabditis elegans EST, clone D10_ce5.trans.... 48 0.81 1
(AM260525) Bartonella tribocorum CIP 105476 complete genome,... 48 0.81 1
(EX674100) JS3CT73JG Heat stressed Fragaria vesca (strain Ha... 44 0.83 2
(EW692667) Q1_Javad_1EPTO_43_K21_331.F_229 Torpedo californi... 46 0.91 2
(ER569977) 1093015788175 Global-Ocean-Sampling_GS-36-01-01-2... 40 0.91 2
(EW692579) Q3_Javad_1EPTO_63_B17_258.F_244 Torpedo californi... 46 0.96 2
(AB083339) Bombyx mori mitochondrial DNA, complete genome, s... 40 1.3 5
(AF149768) Bombyx mori mitochondrion, complete genome. 40 1.3 5
(AB070264) Bombyx mori mitochondrial DNA, complete genome, s... 40 1.3 5
(EJ389187) 1092963887083 Global-Ocean-Sampling_GS-28-01-01-1... 34 2.2 2
(EK157346) 1095458010959 Global-Ocean-Sampling_GS-31-01-01-1... 34 2.2 2
(EK317129) 1095462417519 Global-Ocean-Sampling_GS-31-01-01-1... 32 2.2 2
(EK119127) 1092963324310 Global-Ocean-Sampling_GS-31-01-01-1... 34 2.2 2
(GE435129) 294559811 Nasonia vitripennis Adult Male Nasonia ... 42 2.9 2
(GE396060) 293779116 Nasonia vitripennis Female Pupae Nasoni... 42 3.0 2
(EK083781) 1092961126954 Global-Ocean-Sampling_GS-31-01-01-1... 44 3.0 2
(GE385036) 293694122 Nasonia vitripennis Female Pupae Nasoni... 42 3.0 2
(GE421245) 294507825 Nasonia vitripennis Adult Male Nasonia ... 42 3.1 2
(DQ490018) Schizosaccharomyces pombe strain SPQ-01 p-hydroxy... 46 3.2 1
(CU329670) Schizosaccharomyces pombe chromosome I. 46 3.2 1
(AP009253) Lotus japonicus genomic DNA, chromosome 1, clone:... 46 3.2 1
(AB053168) Schizosaccharomyces pombe ppt1 gene for p-hydroxy... 46 3.2 1
(AX647177) Sequence 1369 from Patent EP1270724. 46 3.2 1
(CR626911) Human DNA sequence from clone XX-NCIH2171_16G22. 46 3.2 1
(AC132479) Homo sapiens BAC clone RP11-769N11 from 2, comple... 46 3.2 1
(AC092602) Homo sapiens BAC clone RP11-134G21 from 2, comple... 46 3.2 1
(AC010984) Homo sapiens BAC clone RP11-510C1 from 2, complet... 46 3.2 1
(AC009318) Homo sapiens 12p BAC RP11-996F15 (Roswell Park Ca... 46 3.2 1
(AC127643) Rattus norvegicus clone CH230-130G18, *** SEQUENC... 46 3.2 1
(AC122650) Rattus norvegicus clone CH230-112P16, WORKING DRA... 46 3.2 1
(AC106216) Rattus norvegicus clone CH230-83A18, WORKING DRAF... 46 3.2 1
(CU928908) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 46 3.2 1
(CU928873) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 46 3.2 1
(AC214583) Bos taurus clone CH240-127B22, WORKING DRAFT SEQU... 46 3.2 1
(AC173615) Bos taurus clone CH240-187A5, WORKING DRAFT SEQUE... 46 3.2 1
(EJ199786) 1092344289628 Global-Ocean-Sampling_GS-27-01-01-1... 46 3.2 1
(EJ198755) 1092344274276 Global-Ocean-Sampling_GS-27-01-01-1... 46 3.2 1
(ED235379) AUAC-aax30c12.g1 Ascaris suum whole genome shotgu... 46 3.2 1
(CV296022) EST884399 petunia floral development cDNA library... 46 3.2 1
(CV295895) EST884272 petunia floral development cDNA library... 46 3.2 1
(CV295877) EST884254 petunia floral development cDNA library... 46 3.2 1
(CV295507) EST883884 petunia floral development cDNA library... 46 3.2 1
(AY301620) Bombyx mandarina from China mitochondrial DNA, co... 40 7.3 4
(EJ876061) 1093018370189 Global-Ocean-Sampling_GS-30-02-01-1... 32 8.0 2
(ER608125) 1093016289851 Global-Ocean-Sampling_GS-36-01-01-2... 32 8.0 2
(EJ866786) 1093018283402 Global-Ocean-Sampling_GS-30-02-01-1... 32 8.1 2
(EW776930) ST040013B20G04 Normalized and subtracted western ... 36 8.3 2
(AC210340) Populus trichocarpa clone POP083-L18, complete se... 44 8.3 4

>(BJ345976) Dictyostelium discoideum cDNA clone:dda29n16, 3' end,
single read.
Length = 761

Score = 1368 bits (690), Expect = 0.0
Identities = 690/690 (100%)
Strand = Plus / Minus


Query: 461 ttgtgttataaatgatatggctgattataaatttgattcaaaagttgaacgtacaaaaac 520
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 759 ttgtgttataaatgatatggctgattataaatttgattcaaaagttgaacgtacaaaaac 700


Query: 521 tagaccaatagcttcaaaacaattaactcataaacaaagtttaatatttttaggtggtca 580
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 699 tagaccaatagcttcaaaacaattaactcataaacaaagtttaatatttttaggtggtca 640


Query: 581 attattagcttcttttggtttaattttatcaagtttaaattattatactattgcattatg 640
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 639 attattagcttcttttggtttaattttatcaagtttaaattattatactattgcattatg 580


Query: 641 tgcatcatcattaccaattgtggtattgtatccatttatgaaaagatttacatattatcc 700
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 579 tgcatcatcattaccaattgtggtattgtatccatttatgaaaagatttacatattatcc 520


Query: 701 acaatttgtattaggattagcatttaattggggagcattggctggatattcagcgattgc 760
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 519 acaatttgtattaggattagcatttaattggggagcattggctggatattcagcgattgc 460


Query: 761 aggatcatgtaattggtcaatcgttgcaccattatatttggcaggtattagttggacgat 820
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 459 aggatcatgtaattggtcaatcgttgcaccattatatttggcaggtattagttggacgat 400


Query: 821 ggtttatgatacaatctatgcacatcaagataaaagggatgatattttagttggtgttaa 880
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 399 ggtttatgatacaatctatgcacatcaagataaaagggatgatattttagttggtgttaa 340


Query: 881 atctactgcattgaaatttgcagaaaagagtcgtattattttatcagttttctctggtct 940
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 339 atctactgcattgaaatttgcagaaaagagtcgtattattttatcagttttctctggtct 280


Query: 941 agttatatctggtatgtttttaactggtatcgctgcaaatatgccattgttttattattt 1000
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 279 agttatatctggtatgtttttaactggtatcgctgcaaatatgccattgttttattattt 220


Query: 1001 gggtactgctgcttgtagtagtcatttaatttggcaattgaaaactgtagatttcaataa 1060
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 219 gggtactgctgcttgtagtagtcatttaatttggcaattgaaaactgtagatttcaataa 160


Query: 1061 tccttcctcttgtcttgaaaaattcatttccaataagaatttcggtctttatttcctttt 1120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 159 tccttcctcttgtcttgaaaaattcatttccaataagaatttcggtctttatttcctttt 100


Query: 1121 aatcattatagtttcaaaattattacaaga 1150
||||||||||||||||||||||||||||||
Sbjct: 99 aatcattatagtttcaaaattattacaaga 70

Lambda K H
1.37 0.711 1.31

Matrix: blastn matrix:1 -3
Number of Sequences: 102105510
Number of Hits to DB: 993,947,409
Number of extensions: 59870498
Number of successful extensions: 4776970
Number of sequences better than 10.0: 127
Length of query: 1230
Length of database: 101,790,757,118
Length adjustment: 24
Effective length of query: 1206
Effective length of database: 99,340,224,878
Effective search space: 119804311202868
Effective search space used: 119804311202868
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)

protein update 2009. 7.13
Homology vs Protein
Query= Contig-U00653-1 (Contig-U00653-1Q) /CSM_Contig/Contig-U00653-1Q.Seq.d
(1230 letters)

Database: nrp_B
3,236,559 sequences; 1,051,180,864 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value

BC134043_1(BC134043|pid:none) Danio rerio zgc:162600, mRNA (cDNA... 268 3e-70
BT049480_1(BT049480|pid:none) Salmo salar clone ssal-evf-534-048... 258 4e-67
BT079077_1(BT079077|pid:none) Esox lucius clone eluc-evq-539-335... 256 9e-67
BC020728_1(BC020728|pid:none) Homo sapiens coenzyme Q2 homolog, ... 239 1e-61
(Q96H96) RecName: Full=Para-hydroxybenzoate--polyprenyltransfera... 239 1e-61
(Q2KIQ4) RecName: Full=Para-hydroxybenzoate--polyprenyltransfera... 238 3e-61
(Q499N4) RecName: Full=Para-hydroxybenzoate--polyprenyltransfera... 236 2e-60
(Q298G6) RecName: Full=Para-hydroxybenzoate--polyprenyltransfera... 229 2e-58
(Q9VHS7) RecName: Full=Para-hydroxybenzoate--polyprenyltransfera... 228 4e-58
AB052553_1(AB052553|pid:none) Arabidopsis thaliana AtPPT1 mRNA f... 222 2e-56
EF197847_7(EF197847|pid:none) Capsella rubella miR319a microRNA ... 220 9e-56
CP000774_653(CP000774|pid:none) Parvibaculum lavamentivorans DS-... 219 2e-55
(Q8I7J4) RecName: Full=Para-hydroxybenzoate--polyprenyltransfera... 218 3e-55
EU959922_1(EU959922|pid:none) Zea mays clone 220662 para-hydroxy... 218 3e-55
CP000600_234(CP000600|pid:none) Ostreococcus lucimarinus CCE9901... 216 1e-54
U13876_8(U13876|pid:none) Caenorhabditis elegans cosmid F57B9, c... 203 1e-50
DQ397513_1(DQ397513|pid:none) Arnebia euchroma geranyl diphospha... 200 1e-49
AB055079_1(AB055079|pid:none) Lithospermum erythrorhizon lepgt-2... 200 1e-49
AB055078_1(AB055078|pid:none) Lithospermum erythrorhizon lepgt-1... 199 2e-49
D88493(D88493)protein F57B9.4 [imported] - Caenorhabditis elegans 195 3e-48
AP007255_771(AP007255|pid:none) Magnetospirillum magneticum AMB-... 194 4e-48
AK009092_1(AK009092|pid:none) Mus musculus adult male tongue cDN... 194 7e-48
CP001331_101(CP001331|pid:none) Micromonas sp. RCC299 chromosome... 192 2e-47
CP000115_2547(CP000115|pid:none) Nitrobacter winogradskyi Nb-255... 187 9e-46
CP000830_3084(CP000830|pid:none) Dinoroseobacter shibae DFL 12, ... 186 1e-45
CR954214_260(CR954214|pid:none) Ostreococcus tauri strain OTTH05... 186 1e-45
CP000319_3017(CP000319|pid:none) Nitrobacter hamburgensis X14, c... 186 1e-45
AM260525_571(AM260525|pid:none) Bartonella tribocorum CIP 105476... 186 2e-45
CP000133_879(CP000133|pid:none) Rhizobium etli CFN 42, complete ... 183 1e-44
CP000463_870(CP000463|pid:none) Rhodopseudomonas palustris BisA5... 183 1e-44
CR380949_147(CR380949|pid:none) Candida glabrata strain CBS138 c... 183 1e-44
CP000494_1589(CP000494|pid:none) Bradyrhizobium sp. BTAi1, compl... 182 2e-44
CP000708_388(CP000708|pid:none) Brucella ovis ATCC 25840 chromos... 181 4e-44
AM236080_966(AM236080|pid:none) Rhizobium leguminosarum bv. vici... 180 1e-43
CP001562_398(CP001562|pid:none) Bartonella grahamii as4aup, comp... 179 1e-43
CP000524_373(CP000524|pid:none) Bartonella bacilliformis KC583, ... 179 2e-43
CP001196_3210(CP001196|pid:none) Oligotropha carboxidovorans OM5... 177 5e-43
CP000264_3913(CP000264|pid:none) Jannaschia sp. CCS1, complete g... 177 9e-43
FN392321_297(FN392321|pid:none) Pichia pastoris GS115 chromosome... 177 9e-43
CP001096_1321(CP001096|pid:none) Rhodopseudomonas palustris TIE-... 176 2e-42
CP000633_712(CP000633|pid:none) Agrobacterium vitis S4 chromosom... 176 2e-42
CP000283_4093(CP000283|pid:none) Rhodopseudomonas palustris BisB... 175 3e-42
CP000628_880(CP000628|pid:none) Agrobacterium radiobacter K84 ch... 175 3e-42
CT005266_138(CT005266|pid:none) Leishmania major strain Friedlin... 174 8e-42
AY224191_1(AY224191|pid:none) Agrobacterium tumefaciens BNQ0605 ... 174 8e-42
CP001389_471(CP001389|pid:none) Rhizobium sp. NGR234, complete g... 173 1e-41
CP001150_2400(CP001150|pid:none) Rhodobacter sphaeroides KD131 c... 173 1e-41
AM989985_15(AM989985|pid:none) Zygosaccharomyces rouxii strain C... 173 1e-41
CP000031_3551(CP000031|pid:none) Ruegeria pomeroyi DSS-3, comple... 172 2e-41
CP000489_620(CP000489|pid:none) Paracoccus denitrificans PD1222 ... 172 2e-41
CP000143_2623(CP000143|pid:none) Rhodobacter sphaeroides 2.4.1 c... 171 4e-41
CR382133_584(CR382133|pid:none) Debaryomyces hansenii strain CBS... 169 1e-40
AM494965_142(AM494965|pid:none) Leishmania braziliensis chromoso... 169 2e-40
CP000376_49(CP000376|pid:none) Silicibacter sp. TM1040 mega plas... 168 3e-40
CP000362_3795(CP000362|pid:none) Roseobacter denitrificans OCh 1... 168 3e-40
CU928165_296(CU928165|pid:none) Kluyveromyces thermotolerans str... 167 7e-40
(Q02E04) RecName: Full=4-hydroxybenzoate octaprenyltransferase; ... 166 1e-39
CQ867551_1(CQ867551|pid:none) Sequence 19 from Patent WO20040744... 166 1e-39
CP000738_474(CP000738|pid:none) Sinorhizobium medicae WSM419, co... 166 2e-39
CR382126_447(CR382126|pid:none) Kluyveromyces lactis strain NRRL... 166 2e-39
CQ867555_1(CQ867555|pid:none) Sequence 23 from Patent WO20040744... 164 5e-39
BA000012_5864(BA000012|pid:none) Mesorhizobium loti MAFF303099 D... 164 6e-39
AY659043_1(AY659043|pid:none) Synthetic construct Peudomonas aer... 162 2e-38
AE016820_140(AE016820|pid:none) Ashbya gossypii (= Eremothecium ... 162 2e-38
AL591688_866(AL591688|pid:none) Sinorhizobium meliloti 1021 comp... 162 2e-38
CR382132_236(CR382132|pid:none) Yarrowia lipolytica strain CLIB1... 162 3e-38
FM992695_923(FM992695|pid:none) Candida dubliniensis CD36 chromo... 162 3e-38
CP000613_3547(CP000613|pid:none) Rhodospirillum centenum SW, com... 162 3e-38
CP001016_2205(CP001016|pid:none) Beijerinckia indica subsp. indi... 160 9e-38
CP000394_2189(CP000394|pid:none) Granulibacter bethesdensis CGDN... 159 3e-37
(A4VGN3) RecName: Full=4-hydroxybenzoate octaprenyltransferase; ... 158 4e-37
(Q87U39) RecName: Full=4-hydroxybenzoate octaprenyltransferase; ... 156 1e-36
AB174216_1(AB174216|pid:none) Macaca fascicularis brain cDNA clo... 156 1e-36
CP000107_564(CP000107|pid:none) Ehrlichia canis str. Jake, compl... 155 3e-36
(Q4K3L9) RecName: Full=4-hydroxybenzoate octaprenyltransferase; ... 155 4e-36
CP000628_2301(CP000628|pid:none) Agrobacterium radiobacter K84 c... 154 5e-36
(Q4ZLB4) RecName: Full=4-hydroxybenzoate octaprenyltransferase; ... 153 1e-35
AP009384_2378(AP009384|pid:none) Azorhizobium caulinodans ORS 57... 152 2e-35
(Q31DM4) RecName: Full=4-hydroxybenzoate octaprenyltransferase; ... 152 2e-35
AL035394_13(AL035394|pid:none) Arabidopsis thaliana DNA chromoso... 152 2e-35
CP000934_151(CP000934|pid:none) Cellvibrio japonicus Ueda107, co... 152 2e-35
(Q48BQ5) RecName: Full=4-hydroxybenzoate octaprenyltransferase; ... 152 3e-35
(A7MPP0) RecName: Full=4-hydroxybenzoate octaprenyltransferase; ... 152 3e-35
(Q3JBS8) RecName: Full=4-hydroxybenzoate octaprenyltransferase; ... 151 5e-35
(Q1QSG2) RecName: Full=4-hydroxybenzoate octaprenyltransferase; ... 150 7e-35
(Q0A5V9) RecName: Full=4-hydroxybenzoate octaprenyltransferase; ... 150 9e-35
(A6TGU9) RecName: Full=4-hydroxybenzoate octaprenyltransferase; ... 150 1e-34
CP001189_3040(CP001189|pid:none) Gluconacetobacter diazotrophicu... 150 1e-34
BX640437_99(BX640437|pid:none) Bordetella bronchiseptica strain ... 149 2e-34
CP000236_424(CP000236|pid:none) Ehrlichia chaffeensis str. Arkan... 149 2e-34
(O52366) RecName: Full=4-hydroxybenzoate octaprenyltransferase; ... 149 3e-34
(Q3K4G3) RecName: Full=4-hydroxybenzoate octaprenyltransferase; ... 149 3e-34
CP001191_2211(CP001191|pid:none) Rhizobium leguminosarum bv. tri... 149 3e-34
BX640422_73(BX640422|pid:none) Bordetella pertussis strain Toham... 148 4e-34
AE017321_531(AE017321|pid:none) Wolbachia endosymbiont strain TR... 148 4e-34
BX640423_100(BX640423|pid:none) Bordetella parapertussis strain ... 148 4e-34
FM178379_2894(FM178379|pid:none) Aliivibrio salmonicida LFI1238 ... 147 8e-34
(Q608Z9) RecName: Full=4-hydroxybenzoate octaprenyltransferase; ... 147 8e-34
CP000107_565(CP000107|pid:none) Ehrlichia canis str. Jake, compl... 147 1e-33
BT037620_1(BT037620|pid:none) Zea mays full-length cDNA clone ZM... 147 1e-33
CP000826_4447(CP000826|pid:none) Serratia proteamaculans 568, co... 146 1e-33
(Q1I2R3) RecName: Full=4-hydroxybenzoate octaprenyltransferase; ... 145 2e-33
CP001139_2458(CP001139|pid:none) Vibrio fischeri MJ11 chromosome... 145 3e-33
CR767821_601(CR767821|pid:none) Ehrlichia ruminantium strain Wel... 145 3e-33
AM902716_4882(AM902716|pid:none) Bordetella petrii strain DSM 12... 145 3e-33
CP000949_156(CP000949|pid:none) Pseudomonas putida W619, complet... 145 3e-33
CP001321_715(CP001321|pid:none) Haemophilus parasuis SH0165, com... 145 4e-33
(A4IYU3) RecName: Full=4-hydroxybenzoate octaprenyltransferase; ... 145 4e-33
(A8A7E0) RecName: Full=4-hydroxybenzoate octaprenyltransferase; ... 144 5e-33
CP000235_283(CP000235|pid:none) Anaplasma phagocytophilum HZ, co... 144 5e-33
(Q83IP7) RecName: Full=4-hydroxybenzoate octaprenyltransferase; ... 144 5e-33
AM270062_17(AM270062|pid:none) Aspergillus niger contig An04c001... 144 5e-33
(A7ZUR2) RecName: Full=4-hydroxybenzoate octaprenyltransferase; ... 144 6e-33
CP001339_126(CP001339|pid:none) Thioalkalivibrio sp. HL-EbGR7, c... 144 6e-33
U00006_87(U00006|pid:none) E. coli chromosomal region from 89.2 ... 144 8e-33
(A3QIF2) RecName: Full=4-hydroxybenzoate octaprenyltransferase; ... 143 1e-32
(A8AN88) RecName: Full=4-hydroxybenzoate octaprenyltransferase; ... 143 1e-32
(A1JRU3) RecName: Full=4-hydroxybenzoate octaprenyltransferase; ... 143 1e-32
CU638743_375(CU638743|pid:none) Podospora anserina genomic DNA c... 143 1e-32
AE005673_3395(AE005673|pid:none) Caulobacter crescentus CB15, co... 143 1e-32
CP001616_145(CP001616|pid:none) Tolumonas auensis DSM 9187, comp... 143 1e-32
(Q2A564) RecName: Full=4-hydroxybenzoate octaprenyltransferase; ... 143 1e-32
(Q87F82) RecName: Full=4-hydroxybenzoate octaprenyltransferase; ... 143 1e-32
CP000961_4447(CP000961|pid:none) Shewanella woodyi ATCC 51908, c... 142 2e-32
(A7FN99) RecName: Full=4-hydroxybenzoate octaprenyltransferase; ... 142 2e-32
AE005174_5005(AE005174|pid:none) Escherichia coli O157:H7 EDL933... 142 2e-32
(Q0I0W3) RecName: Full=4-hydroxybenzoate octaprenyltransferase; ... 142 2e-32
(B0UUY3) RecName: Full=4-hydroxybenzoate octaprenyltransferase; ... 142 2e-32
(A8GZR0) RecName: Full=4-hydroxybenzoate octaprenyltransferase; ... 142 2e-32
CU928158_3959(CU928158|pid:none) Escherichia fergusonii ATCC 354... 142 2e-32
(Q7VL38) RecName: Full=4-hydroxybenzoate octaprenyltransferase; ... 142 3e-32
(Q5E207) RecName: Full=4-hydroxybenzoate octaprenyltransferase; ... 141 4e-32
(Q21DY7) RecName: Full=4-hydroxybenzoate octaprenyltransferase; ... 141 4e-32
AY967047_1(AY967047|pid:none) Synthetic construct isolate FTT085... 141 4e-32
(A1U6P5) RecName: Full=4-hydroxybenzoate octaprenyltransferase; ... 141 4e-32
(A9N1L3) RecName: Full=4-hydroxybenzoate octaprenyltransferase; ... 141 4e-32
CP000941_45(CP000941|pid:none) Xylella fastidiosa M12, complete ... 141 5e-32
CP000488_69(CP000488|pid:none) Candidatus Ruthia magnifica str. ... 141 5e-32
AM494475_274(AM494475|pid:none) Orientia tsutsugamushi Boryong c... 140 7e-32
(A9MH90) RecName: Full=4-hydroxybenzoate octaprenyltransferase; ... 140 9e-32
AP009247_76(AP009247|pid:none) Candidatus Vesicomyosocius okutan... 140 9e-32
CP000544_946(CP000544|pid:none) Halorhodospira halophila SL1, co... 140 1e-31
CP001079_597(CP001079|pid:none) Anaplasma marginale str. Florida... 139 2e-31
CP000030_600(CP000030|pid:none) Anaplasma marginale str. St. Mar... 139 2e-31
AP007157_894(AP007157|pid:none) Aspergillus oryzae RIB40 genomic... 139 2e-31
CP001020_1773(CP001020|pid:none) Coxiella burnetii CbuK_Q154, co... 139 3e-31
(Q494A7) RecName: Full=4-hydroxybenzoate octaprenyltransferase; ... 138 4e-31
(Q7MQ87) RecName: Full=4-hydroxybenzoate octaprenyltransferase; ... 138 4e-31
(Q8DD49) RecName: Full=4-hydroxybenzoate octaprenyltransferase; ... 138 5e-31
AL451012_4(AL451012|pid:none) Neurospora crassa DNA linkage grou... 137 1e-30
AE003849_68(AE003849|pid:none) Xylella fastidiosa 9a5c, complete... 137 1e-30
(Q9PH76) RecName: Full=4-hydroxybenzoate octaprenyltransferase; ... 137 1e-30
(Q5QUP3) RecName: Full=4-hydroxybenzoate octaprenyltransferase; ... 136 2e-30
(Q3BYM7) RecName: Full=4-hydroxybenzoate octaprenyltransferase; ... 136 2e-30
(Q48AL9) RecName: Full=4-hydroxybenzoate octaprenyltransferase; ... 136 2e-30
CP000644_3920(CP000644|pid:none) Aeromonas salmonicida subsp. sa... 135 2e-30
(B0U042) RecName: Full=4-hydroxybenzoate octaprenyltransferase; ... 135 2e-30
(Q6D9I8) RecName: Full=4-hydroxybenzoate octaprenyltransferase; ... 135 3e-30
(Q5WWR8) RecName: Full=4-hydroxybenzoate octaprenyltransferase; ... 135 4e-30
CP001103_72(CP001103|pid:none) Alteromonas macleodii 'Deep ecoty... 134 5e-30
CP000157_585(CP000157|pid:none) Erythrobacter litoralis HTCC2594... 134 7e-30
(A5IBS2) RecName: Full=4-hydroxybenzoate octaprenyltransferase; ... 133 1e-29
CP000943_2118(CP000943|pid:none) Methylobacterium sp. 4-46, comp... 133 1e-29
CP001111_3802(CP001111|pid:none) Stenotrophomonas maltophilia R5... 133 1e-29
CP000471_238(CP000471|pid:none) Magnetococcus sp. MC-1, complete... 133 1e-29
CP000158_1351(CP000158|pid:none) Hyphomonas neptunium ATCC 15444... 132 2e-29
(Q7VQU0) RecName: Full=4-hydroxybenzoate octaprenyltransferase; ... 132 2e-29
CP001612_814(CP001612|pid:none) Rickettsia africae ESF-5, comple... 132 3e-29
(Q2Y5S3) RecName: Full=4-hydroxybenzoate octaprenyltransferase; ... 132 3e-29
(Q5ZVL0) RecName: Full=4-hydroxybenzoate octaprenyltransferase; ... 132 3e-29
(A9L4Q8) RecName: Full=4-hydroxybenzoate octaprenyltransferase; ... 132 3e-29
(A6WT76) RecName: Full=4-hydroxybenzoate octaprenyltransferase; ... 132 3e-29
CP001510_623(CP001510|pid:none) Methylobacterium extorquens AM1,... 132 3e-29
(A3CZR1) RecName: Full=4-hydroxybenzoate octaprenyltransferase; ... 132 3e-29
(Q5X5D5) RecName: Full=4-hydroxybenzoate octaprenyltransferase; ... 131 4e-29
(Q0HN13) RecName: Full=4-hydroxybenzoate octaprenyltransferase; ... 131 4e-29
A97831(A97831) hypothetical protein ubiA [imported] - Rickettsia... 131 4e-29
CP000908_873(CP000908|pid:none) Methylobacterium extorquens PA1,... 130 7e-29
(Q8EJJ5) RecName: Full=4-hydroxybenzoate octaprenyltransferase; ... 130 7e-29
CP000766_1078(CP000766|pid:none) Rickettsia rickettsii str. Iowa... 130 1e-28
CP001277_1463(CP001277|pid:none) Candidatus Hamiltonella defensa... 130 1e-28
CP001227_796(CP001227|pid:none) Rickettsia peacockii str. Rustic... 130 1e-28
(A5F4H4) RecName: Full=4-hydroxybenzoate octaprenyltransferase; ... 129 2e-28
CP000683_764(CP000683|pid:none) Rickettsia massiliae MTU5, compl... 129 2e-28
AE008692_1419(AE008692|pid:none) Zymomonas mobilis subsp. mobili... 128 4e-28
CP000009_1912(CP000009|pid:none) Gluconobacter oxydans 621H, com... 125 2e-27
(Q3SLJ4) RecName: Full=4-hydroxybenzoate octaprenyltransferase; ... 125 2e-27
CP000237_776(CP000237|pid:none) Neorickettsia sennetsu strain Mi... 125 3e-27
CP000100_1962(CP000100|pid:none) Synechococcus elongatus PCC 794... 125 4e-27
A71675(A71675) 4-hydroxybenzoate octaprenyltransferase (ubiA) RP... 124 7e-27
CP000356_2254(CP000356|pid:none) Sphingopyxis alaskensis RB2256,... 124 7e-27
AM910993_418(AM910993|pid:none) Plasmodium knowlesi strain H chr... 124 9e-27
CP000713_477(CP000713|pid:none) Psychrobacter sp. PRwf-1, comple... 122 3e-26
DQ295237_12(DQ295237|pid:none) Uncultured marine bacterium Ant4D... 122 3e-26
(Q5P5M0) RecName: Full=4-hydroxybenzoate octaprenyltransferase; ... 121 6e-26
(Q4FR08) RecName: Full=4-hydroxybenzoate octaprenyltransferase; ... 120 1e-25
AP008231_2131(AP008231|pid:none) Synechococcus elongatus PCC 630... 120 1e-25
AM778956_109(AM778956|pid:none) Microcystis aeruginosa PCC 7806 ... 119 2e-25
CP001037_4220(CP001037|pid:none) Nostoc punctiforme PCC 73102, c... 118 4e-25
CP000409_883(CP000409|pid:none) Rickettsia canadensis str. McKie... 118 4e-25
CP000847_980(CP000847|pid:none) Rickettsia akari str. Hartford, ... 118 5e-25
(Q6F9N8) RecName: Full=4-hydroxybenzoate octaprenyltransferase; ... 117 8e-25
(Q9JV93) RecName: Full=4-hydroxybenzoate octaprenyltransferase; ... 117 8e-25
(Q9K083) RecName: Full=4-hydroxybenzoate octaprenyltransferase; ... 117 8e-25
AL954747_1839(AL954747|pid:none) Nitrosomonas europaea ATCC 1971... 117 1e-24
(Q1GXB3) RecName: Full=4-hydroxybenzoate octaprenyltransferase; ... 117 1e-24
(Q82TP2) RecName: Full=4-hydroxybenzoate octaprenyltransferase; ... 117 1e-24
AE016825_3608(AE016825|pid:none) Chromobacterium violaceum ATCC ... 117 1e-24
(Q47J11) RecName: Full=4-hydroxybenzoate octaprenyltransferase; ... 116 1e-24
CP001050_460(CP001050|pid:none) Neisseria gonorrhoeae NCCP11945,... 116 2e-24
CP000513_374(CP000513|pid:none) Dichelobacter nodosus VCS1703A, ... 115 2e-24
CP000828_3503(CP000828|pid:none) Acaryochloris marina MBIC11017,... 115 4e-24
(Q5F9S8) RecName: Full=4-hydroxybenzoate octaprenyltransferase; ... 114 5e-24
CP000239_985(CP000239|pid:none) Synechococcus sp. JA-3-3Ab, comp... 114 9e-24
(A1KSZ7) RecName: Full=4-hydroxybenzoate octaprenyltransferase; ... 114 9e-24
CP001281_790(CP001281|pid:none) Thauera sp. MZ1T, complete genome. 113 1e-23
CP001132_732(CP001132|pid:none) Acidithiobacillus ferrooxidans A... 112 2e-23
(A2SMA7) RecName: Full=4-hydroxybenzoate octaprenyltransferase; ... 112 3e-23
CP000825_534(CP000825|pid:none) Prochlorococcus marinus str. MIT... 111 5e-23
BA000039_401(BA000039|pid:none) Thermosynechococcus elongatus BP... 111 6e-23
CP000951_1373(CP000951|pid:none) Synechococcus sp. PCC 7002, com... 110 8e-23
BA000021_127(BA000021|pid:none) Wigglesworthia glossinidia endos... 110 1e-22
CP000576_482(CP000576|pid:none) Prochlorococcus marinus str. MIT... 110 1e-22
CP000097_1723(CP000097|pid:none) Synechococcus sp. CC9902, compl... 110 1e-22
(A1TJR2) RecName: Full=4-hydroxybenzoate octaprenyltransferase; ... 110 1e-22
DQ366731_11(DQ366731|pid:none) Uncultured Prochlorococcus marinu... 109 2e-22
CP001068_2877(CP001068|pid:none) Ralstonia pickettii 12J chromos... 108 3e-22
CP001052_686(CP001052|pid:none) Burkholderia phytofirmans PsJN c... 108 4e-22
CP000806_2560(CP000806|pid:none) Cyanothece sp. ATCC 51142 circu... 107 7e-22
(Q12GA4) RecName: Full=4-hydroxybenzoate octaprenyltransferase; ... 107 9e-22
CP001013_1604(CP001013|pid:none) Leptothrix cholodnii SP-6, comp... 107 9e-22
CP000117_3512(CP000117|pid:none) Anabaena variabilis ATCC 29413,... 107 1e-21
CP001408_3437(CP001408|pid:none) Burkholderia pseudomallei MSHR3... 107 1e-21
EU603710_24(EU603710|pid:none) Aphanizomenon sp. NH-5 genomic se... 106 1e-21
AP005502_11(AP005502|pid:none) Oryza sativa Japonica Group genom... 106 1e-21
CP000124_3309(CP000124|pid:none) Burkholderia pseudomallei 1710b... 106 1e-21
BX571965_2888(BX571965|pid:none) Burkholderia pseudomallei strai... 106 1e-21
AM920431_38(AM920431|pid:none) Penicillium chrysogenum Wisconsin... 106 1e-21
(A3MPC2) RecName: Full=4-hydroxybenzoate octaprenyltransferase; ... 106 1e-21
CP000086_1273(CP000086|pid:none) Burkholderia thailandensis E264... 106 2e-21
(Q2SZ16) RecName: Full=4-hydroxybenzoate octaprenyltransferase; ... 106 2e-21
(Q46XG9) RecName: Full=4-hydroxybenzoate octaprenyltransferase; ... 105 3e-21
(Q145H3) RecName: Full=4-hydroxybenzoate octaprenyltransferase; ... 105 3e-21
BX569694_31(BX569694|pid:none) Synechococcus sp. WH8102 complete... 105 4e-21
CP000095_493(CP000095|pid:none) Prochlorococcus marinus str. NAT... 103 1e-20
AM260479_3030(AM260479|pid:none) Ralstonia eutropha H16 chromoso... 103 2e-20
(Q0K739) RecName: Full=4-hydroxybenzoate octaprenyltransferase; ... 103 2e-20
(A4G1Y9) RecName: Full=4-hydroxybenzoate octaprenyltransferase; ... 103 2e-20
CP001344_1419(CP001344|pid:none) Cyanothece sp. PCC 7425, comple... 102 2e-20
(A0K4Q5) RecName: Full=4-hydroxybenzoate octaprenyltransferase; ... 100 1e-19
CP000958_694(CP000958|pid:none) Burkholderia cenocepacia MC0-3 c... 100 1e-19
(Q1LJ64) RecName: Full=4-hydroxybenzoate octaprenyltransferase; ... 100 1e-19
CP001291_1136(CP001291|pid:none) Cyanothece sp. PCC 7424, comple... 100 2e-19
CU633749_2522(CU633749|pid:none) Cupriavidus taiwanensis str. LM... 99 2e-19
CU694390_116(CU694390|pid:none) Ralstonia solanacearum strain Mo... 99 2e-19
CP000435_2105(CP000435|pid:none) Synechococcus sp. CC9311, compl... 99 3e-19
CP001025_639(CP001025|pid:none) Burkholderia ambifaria MC40-6 ch... 99 4e-19
AM747720_3302(AM747720|pid:none) Burkholderia cenocepacia J2315 ... 98 5e-19
AM270027_12(AM270027|pid:none) Aspergillus niger contig An02c032... 98 7e-19
CP000815_704(CP000815|pid:none) Paulinella chromatophora chromat... 97 2e-18
U13876_10(U13876|pid:none) Caenorhabditis elegans cosmid F57B9, ... 95 6e-18
AK300972_1(AK300972|pid:none) Homo sapiens cDNA FLJ61421 complet... 95 6e-18
CP000554_654(CP000554|pid:none) Prochlorococcus marinus str. MIT... 90 1e-16
CP001154_322(CP001154|pid:none) Laribacter hongkongensis HLHK9, ... 90 1e-16
CP001080_1440(CP001080|pid:none) Sulfurihydrogenibium sp. YO3AOP... 82 4e-14
AP010904_493(AP010904|pid:none) Desulfovibrio magneticus RS-1 DN... 80 1e-13
CP000249_505(CP000249|pid:none) Frankia sp. CcI3, complete genome. 78 7e-13
BA000030_4817(BA000030|pid:none) Streptomyces avermitilis MA-468... 75 6e-12
AE017285_969(AE017285|pid:none) Desulfovibrio vulgaris subsp. vu... 75 6e-12
AP008955_2464(AP008955|pid:none) Brevibacillus brevis NBRC 10059... 73 2e-11
CP001147_1179(CP001147|pid:none) Thermodesulfovibrio yellowstoni... 73 2e-11
AP006840_1565(AP006840|pid:none) Symbiobacterium thermophilum IA... 72 3e-11
CP000141_1755(CP000141|pid:none) Carboxydothermus hydrogenoforma... 72 3e-11
AP009493_4202(AP009493|pid:none) Streptomyces griseus subsp. gri... 72 5e-11
CP001229_902(CP001229|pid:none) Sulfurihydrogenibium azorense Az... 72 5e-11
CP000777_969(CP000777|pid:none) Leptospira biflexa serovar Patoc... 71 7e-11
AM260522_177(AM260522|pid:none) Helicobacter acinonychis str. Sh... 71 7e-11
AE000657_37(AE000657|pid:none) Aquifex aeolicus VF5, complete ge... 71 7e-11
CP000448_646(CP000448|pid:none) Syntrophomonas wolfei subsp. wol... 71 7e-11
AE010300_2331(AE010300|pid:none) Leptospira interrogans serovar ... 71 9e-11
AE016823_1568(AE016823|pid:none) Leptospira interrogans serovar ... 71 9e-11
AY915472_1(AY915472|pid:none) Schistosoma japonicum SJCHGC06961 ... 70 2e-10
CP001358_640(CP001358|pid:none) Desulfovibrio desulfuricans subs... 70 2e-10
CP000241_1308(CP000241|pid:none) Helicobacter pylori HPAG1, comp... 70 2e-10
CP000487_212(CP000487|pid:none) Campylobacter fetus subsp. fetus... 69 3e-10
CP000930_1879(CP000930|pid:none) Heliobacterium modesticaldum Ic... 69 3e-10
AE001439_1274(AE001439|pid:none) Helicobacter pylori J99, comple... 69 3e-10
CP000142_346(CP000142|pid:none) Pelobacter carbinolicus DSM 2380... 69 3e-10
CP000975_1911(CP000975|pid:none) Methylacidiphilum infernorum V4... 69 4e-10
CP000481_254(CP000481|pid:none) Acidothermus cellulolyticus 11B ... 69 4e-10
AE000511_1341(AE000511|pid:none) Helicobacter pylori 26695, comp... 65 4e-09
CP000359_2305(CP000359|pid:none) Deinococcus geothermalis DSM 11... 65 4e-09
CP001230_1437(CP001230|pid:none) Persephonella marina EX-H1, com... 65 5e-09
CP000875_1709(CP000875|pid:none) Herpetosiphon aurantiacus ATCC ... 65 5e-09
CP001173_1280(CP001173|pid:none) Helicobacter pylori G27, comple... 65 6e-09
AP009178_304(AP009178|pid:none) Nitratiruptor sp. SB155-2 genomi... 64 8e-09
BA000023_2369(BA000023|pid:none) Sulfolobus tokodaii str. 7 DNA,... 64 1e-08
AE002160_481(AE002160|pid:none) Chlamydia muridarum Nigg, comple... 63 2e-08
CP000153_1803(CP000153|pid:none) Sulfurimonas denitrificans DSM ... 63 2e-08
BA000011_409(BA000011|pid:none) Thermoplasma volcanium GSS1 DNA,... 62 3e-08
AP009179_2215(AP009179|pid:none) Sulfurovum sp. NBC37-1 genomic ... 61 9e-08
CP000968_479(CP000968|pid:none) Candidatus Korarchaeum cryptofil... 60 2e-07
CP000232_95(CP000232|pid:none) Moorella thermoacetica ATCC 39073... 59 4e-07
CP000667_4038(CP000667|pid:none) Salinispora tropica CNB-440, co... 58 6e-07
CP000768_149(CP000768|pid:none) Campylobacter jejuni subsp. doyl... 58 6e-07
EF106972_55(EF106972|pid:none) Uncultured marine Nitrospinaceae ... 58 8e-07
CP000473_1287(CP000473|pid:none) Solibacter usitatus Ellin6076, ... 58 8e-07
CP000814_159(CP000814|pid:none) Campylobacter jejuni subsp. jeju... 57 1e-06
CP000025_155(CP000025|pid:none) Campylobacter jejuni RM1221, com... 57 1e-06
CT573072_520(CT573072|pid:none) Kuenenia stuttgartiensis genome ... 57 1e-06
BC116454_1(BC116454|pid:none) Homo sapiens coenzyme Q2 homolog, ... 57 2e-06
CP000767_189(CP000767|pid:none) Campylobacter curvus 525.92, com... 56 2e-06
CP001124_230(CP001124|pid:none) Geobacter bemidjiensis Bem, comp... 56 2e-06
AY816013_1(AY816013|pid:none) Schistosoma japonicum SJCHGC06589 ... 56 2e-06
AE017125_1668(AE017125|pid:none) Helicobacter hepaticus ATCC 514... 56 2e-06
CP000077_2181(CP000077|pid:none) Sulfolobus acidocaldarius DSM 6... 55 4e-06
CP001390_411(CP001390|pid:none) Geobacter sp. FRC-32, complete g... 55 7e-06
CP000482_283(CP000482|pid:none) Pelobacter propionicus DSM 2379,... 55 7e-06
CP001197_1324(CP001197|pid:none) Desulfovibrio vulgaris str. 'Mi... 54 9e-06
CP001614_77(CP001614|pid:none) Teredinibacter turnerae T7901, co... 53 2e-05
BA000002_1033(BA000002|pid:none) Aeropyrum pernix K1 DNA, comple... 53 3e-05
(Q2JNL3) RecName: Full=Protoheme IX farnesyltransferase; ... 53 3e-05
CP001014_1478(CP001014|pid:none) Thermoproteus neutrophilus V24S... 52 4e-05
CP000561_1680(CP000561|pid:none) Pyrobaculum calidifontis JCM 11... 52 6e-05
AL445066_265(AL445066|pid:none) Thermoplasma acidophilum complet... 51 1e-04
(Q7MDC8) RecName: Full=Protoheme IX farnesyltransferase; ... 51 1e-04
AE017261_572(AE017261|pid:none) Picrophilus torridus DSM 9790, c... 51 1e-04
(Q8PFU4) RecName: Full=Protoheme IX farnesyltransferase; ... 51 1e-04
AE017180_437(AE017180|pid:none) Geobacter sulfurreducens PCA, co... 50 1e-04
CP000941_654(CP000941|pid:none) Xylella fastidiosa M12, complete... 50 2e-04
(Q8D6H2) RecName: Full=Protoheme IX farnesyltransferase; ... 50 2e-04
CP001281_1005(CP001281|pid:none) Thauera sp. MZ1T, complete geno... 50 2e-04
AX970936_1(AX970936|pid:none) Sequence 1739 from Patent EP1104808. 49 3e-04
(Q2GJ17) RecName: Full=Protoheme IX farnesyltransferase; ... 49 3e-04
CP000792_130(CP000792|pid:none) Campylobacter concisus 13826, co... 49 3e-04
(Q2NYG1) RecName: Full=Protoheme IX farnesyltransferase; ... 49 3e-04
BX294137_255(BX294137|pid:none) Rhodopirellula baltica SH 1 comp... 49 4e-04
(A7N6I9) RecName: Full=Protoheme IX farnesyltransferase 2; ... 49 4e-04
CP001391_393(CP001391|pid:none) Wolbachia sp. wRi, complete geno... 49 5e-04
CP001037_5032(CP001037|pid:none) Nostoc punctiforme PCC 73102, c... 49 5e-04
AE009442_565(AE009442|pid:none) Xylella fastidiosa Temecula1, co... 48 6e-04
(A1SY55) RecName: Full=Protoheme IX farnesyltransferase; ... 47 0.001
(Q0HDH7) RecName: Full=Protoheme IX farnesyltransferase 2; ... 47 0.001
CP001111_319(CP001111|pid:none) Stenotrophomonas maltophilia R55... 47 0.001
(Q15N01) RecName: Full=Protoheme IX farnesyltransferase 2; ... 47 0.001
CP001359_394(CP001359|pid:none) Anaeromyxobacter dehalogenans 2C... 47 0.001
(Q2A5L1) RecName: Full=Protoheme IX farnesyltransferase; ... 47 0.001
CP001277_60(CP001277|pid:none) Candidatus Hamiltonella defensa 5... 47 0.001
CU468135_2519(CU468135|pid:none) Erwinia tasmaniensis strain ET1... 47 0.002
(Q8YYA3) RecName: Full=Protoheme IX farnesyltransferase; ... 47 0.002
(A0Q4E4) RecName: Full=Protoheme IX farnesyltransferase; ... 47 0.002
(Q83GF8) RecName: Full=Protoheme IX farnesyltransferase; ... 47 0.002
(A3Q941) RecName: Full=Protoheme IX farnesyltransferase 1; ... 47 0.002
(Q6D836) RecName: Full=Protoheme IX farnesyltransferase; ... 46 0.002
CR543861_2216(CR543861|pid:none) Acinetobacter sp. ADP1 complete... 46 0.002
(Q6F9R1) RecName: Full=Protoheme IX farnesyltransferase; ... 46 0.002
(Q67ML5) RecName: Full=Protoheme IX farnesyltransferase; ... 46 0.002
(B0KFZ0) RecName: Full=Protoheme IX farnesyltransferase 1; ... 46 0.003
(Q3IJQ0) RecName: Full=Protoheme IX farnesyltransferase 2; ... 46 0.003
(Q88RL9) RecName: Full=Protoheme IX farnesyltransferase 1; ... 45 0.004
CP001404_720(CP001404|pid:none) Sulfolobus islandicus Y.N.15.51,... 45 0.004
(A6VRF6) RecName: Full=Protoheme IX farnesyltransferase; ... 45 0.004
(Q0HPR0) RecName: Full=Protoheme IX farnesyltransferase 2; ... 45 0.005
CP000359_405(CP000359|pid:none) Deinococcus geothermalis DSM 113... 45 0.005
(Q1LTJ4) RecName: Full=Protoheme IX farnesyltransferase; ... 45 0.007
(A4TPF3) RecName: Full=Protoheme IX farnesyltransferase; ... 45 0.007
AE017283_1540(AE017283|pid:none) Propionibacterium acnes KPA1712... 45 0.007
(Q4WP81) RecName: Full=Protoheme IX farnesyltransferase, mitocho... 45 0.007
CP000860_1031(CP000860|pid:none) Candidatus Desulforudis audaxvi... 45 0.007
AP008232_663(AP008232|pid:none) Sodalis glossinidius str. 'morsi... 44 0.009
CP001628_1075(CP001628|pid:none) Micrococcus luteus NCTC 2665, c... 44 0.009
CP001401_1916(CP001401|pid:none) Sulfolobus islandicus M.16.27, ... 44 0.009
CP000514_69(CP000514|pid:none) Marinobacter aquaeolei VT8, compl... 44 0.009
(A1TWQ8) RecName: Full=Protoheme IX farnesyltransferase; ... 44 0.009
(Q2NV87) RecName: Full=Protoheme IX farnesyltransferase; ... 44 0.009
(A1JNP6) RecName: Full=Protoheme IX farnesyltransferase; ... 44 0.012
(A7N2M2) RecName: Full=Protoheme IX farnesyltransferase 1; ... 44 0.012
(B1XKB3) RecName: Full=Protoheme IX farnesyltransferase; ... 44 0.012
AM942759_104(AM942759|pid:none) Proteus mirabilis strain HI4320,... 44 0.012
(Q4ZXC3) RecName: Full=Protoheme IX farnesyltransferase; ... 44 0.012
(Q7NQZ3) RecName: Full=Protoheme IX farnesyltransferase 2; ... 44 0.015
AB033827_5(AB033827|pid:none) Shewanella violacea CyoA, CyoB, Cy... 44 0.015
(A5VWP2) RecName: Full=Protoheme IX farnesyltransferase 1; ... 44 0.015
AM920428_811(AM920428|pid:none) Penicillium chrysogenum Wisconsi... 44 0.015
(Q8CXI8) RecName: Full=Protoheme IX farnesyltransferase; ... 43 0.020
AM420293_1280(AM420293|pid:none) Saccharopolyspora erythraea NRR... 43 0.020
(A9MM32) RecName: Full=Protoheme IX farnesyltransferase; ... 43 0.020
(B3CN58) RecName: Full=Protoheme IX farnesyltransferase; ... 43 0.020
AP008981_1195(AP008981|pid:none) Orientia tsutsugamushi str. Ike... 43 0.020
CP001063_317(CP001063|pid:none) Shigella boydii CDC 3083-94, com... 43 0.026
(A6WC46) RecName: Full=Protoheme IX farnesyltransferase; ... 43 0.026
(Q79EF2) RecName: Full=Protoheme IX farnesyltransferase; ... 43 0.026
AE005674_369(AE005674|pid:none) Shigella flexneri 2a str. 301, c... 43 0.026
(Q089I2) RecName: Full=Protoheme IX farnesyltransferase 1; ... 43 0.026
(Q83SF7) RecName: Full=Protoheme IX farnesyltransferase; ... 43 0.026
CP001601_1203(CP001601|pid:none) Corynebacterium aurimucosum ATC... 43 0.026
(Q57SC4) RecName: Full=Protoheme IX farnesyltransferase; ... 42 0.034
(A4XNK8) RecName: Full=Protoheme IX farnesyltransferase; ... 42 0.034
(Q72VU2) RecName: Full=Protoheme IX farnesyltransferase; ... 42 0.034
AE017220_481(AE017220|pid:none) Salmonella enterica subsp. enter... 42 0.034
(A9MWZ0) RecName: Full=Protoheme IX farnesyltransferase; ... 42 0.034
CP000263_263(CP000263|pid:none) Buchnera aphidicola str. Cc (Cin... 42 0.034
CP001600_2135(CP001600|pid:none) Edwardsiella ictaluri 93-146, c... 42 0.034
(A6T5H1) RecName: Full=Protoheme IX farnesyltransferase; ... 42 0.034
AP006725_1119(AP006725|pid:none) Klebsiella pneumoniae NTUH-K204... 42 0.034
(Q057F2) RecName: Full=Protoheme IX farnesyltransferase; ... 42 0.034
CP000243_442(CP000243|pid:none) Escherichia coli UTI89, complete... 42 0.045
CP001164_466(CP001164|pid:none) Escherichia coli O157:H7 str. EC... 42 0.045
CP001127_461(CP001127|pid:none) Salmonella enterica subsp. enter... 42 0.045
(A1A897) RecName: Full=Protoheme IX farnesyltransferase; ... 42 0.045
CU928163_457(CU928163|pid:none) Escherichia coli UMN026 chromoso... 42 0.045
(A5CF31) RecName: Full=Protoheme IX farnesyltransferase; ... 42 0.045
(Q0ABY1) RecName: Full=Protoheme IX farnesyltransferase; ... 42 0.045
BC123368_1(BC123368|pid:none) Xenopus laevis hypothetical protei... 42 0.045
(Q1IGZ4) RecName: Full=Protoheme IX farnesyltransferase 1; ... 42 0.045
(Q8Z8V5) RecName: Full=Protoheme IX farnesyltransferase; ... 42 0.045
(A7ZII5) RecName: Full=Protoheme IX farnesyltransferase; ... 42 0.045
AY466718_5(AY466718|pid:none) Pseudomonas putida strain DOT-T1E ... 42 0.045
(B7K336) RecName: Full=Protoheme IX farnesyltransferase; ... 42 0.045
(A6V8N8) RecName: Full=Protoheme IX farnesyltransferase 2; ... 42 0.059
AM181176_5019(AM181176|pid:none) Pseudomonas fluorescens SBW25 c... 42 0.059
(Q04PG4) RecName: Full=Protoheme IX farnesyltransferase; ... 42 0.059
(B0KPE4) RecName: Full=Protoheme IX farnesyltransferase 2; ... 42 0.059
(Q9WWR5) RecName: Full=Protoheme IX farnesyltransferase; ... 41 0.077
(A1RZ10) RecName: Full=Protoheme IX farnesyltransferase; ... 41 0.077
(A5CRS6) RecName: Full=Protoheme IX farnesyltransferase; ... 41 0.077
(Q3Z4X5) RecName: Full=Protoheme IX farnesyltransferase; ... 41 0.077
AM270074_13(AM270074|pid:none) Aspergillus niger contig An04c013... 41 0.077
(B0C0A5) RecName: Full=Protoheme IX farnesyltransferase; ... 41 0.10
BA000030_6322(BA000030|pid:none) Streptomyces avermitilis MA-468... 41 0.10
(Q887G7) RecName: Full=Protoheme IX farnesyltransferase; ... 41 0.10
(Q48M92) RecName: Full=Protoheme IX farnesyltransferase; ... 41 0.10
(Q6G4C6) RecName: Full=Protoheme IX farnesyltransferase; ... 41 0.10
(Q3IRC9) RecName: Full=Protoheme IX farnesyltransferase 1; ... 41 0.10
(Q829U3) RecName: Full=Protoheme IX farnesyltransferase; ... 41 0.10
(A4YC13) RecName: Full=Protoheme IX farnesyltransferase 1; ... 40 0.13
(B1JDU9) RecName: Full=Protoheme IX farnesyltransferase 2; ... 40 0.13
(Q1RI93) RecName: Full=Protoheme IX farnesyltransferase; ... 40 0.17
(Q87IH5) RecName: Full=Protoheme IX farnesyltransferase 2; ... 40 0.17
(A0QWY2) RecName: Full=Protoheme IX farnesyltransferase; ... 40 0.17
(A3CYW8) RecName: Full=Protoheme IX farnesyltransferase; ... 40 0.17
(B0REI2) RecName: Full=Protoheme IX farnesyltransferase; ... 40 0.17
CU458896_2734(CU458896|pid:none) Mycobacterium abscessus chromos... 40 0.17
CP001616_2051(CP001616|pid:none) Tolumonas auensis DSM 9187, com... 40 0.17
(Q6AF34) RecName: Full=Protoheme IX farnesyltransferase; ... 40 0.17
AP011115_6968(AP011115|pid:none) Rhodococcus opacus B4 DNA, comp... 40 0.17
(Q0RH20) RecName: Full=Protoheme IX farnesyltransferase; ... 40 0.22
(Q1IEP0) RecName: Full=Protoheme IX farnesyltransferase 2; ... 40 0.22
CP000431_7115(CP000431|pid:none) Rhodococcus jostii RHA1, comple... 40 0.22
(A4W799) RecName: Full=Protoheme IX farnesyltransferase; ... 40 0.22
(Q6KZG0) RecName: Full=Protoheme IX farnesyltransferase 2; ... 40 0.22
CT573213_4471(CT573213|pid:none) Frankia alni str. ACN14A chromo... 40 0.22
(A8GVN8) RecName: Full=Protoheme IX farnesyltransferase; ... 40 0.22
(Q0S0I5) RecName: Full=Protoheme IX farnesyltransferase; ... 40 0.22
CP000758_582(CP000758|pid:none) Ochrobactrum anthropi ATCC 49188... 39 0.29
CP000462_2864(CP000462|pid:none) Aeromonas hydrophila subsp. hyd... 39 0.29
CP000384_2401(CP000384|pid:none) Mycobacterium sp. MCS, complete... 39 0.29
(A0KME5) RecName: Full=Protoheme IX farnesyltransferase; ... 39 0.29
CP000854_2233(CP000854|pid:none) Mycobacterium marinum M, comple... 39 0.29
(Q310M2) RecName: Full=Protoheme IX farnesyltransferase; ... 39 0.29
(A6WWG0) RecName: Full=Protoheme IX farnesyltransferase; ... 39 0.29
(O28243) RecName: Full=Protoheme IX farnesyltransferase; ... 39 0.29
CP000777_2542(CP000777|pid:none) Leptospira biflexa serovar Pato... 39 0.38
(A4SPY8) RecName: Full=Protoheme IX farnesyltransferase; ... 39 0.38
(A0PPP7) RecName: Full=Protoheme IX farnesyltransferase; ... 39 0.38
(A9VUA6) RecName: Full=Protoheme IX farnesyltransferase; ... 39 0.38
(Q2JCG7) RecName: Full=Protoheme IX farnesyltransferase; ... 39 0.38
(A0RHW3) RecName: Full=Protoheme IX farnesyltransferase; ... 39 0.38
(B7H6T1) RecName: Full=Protoheme IX farnesyltransferase; ... 39 0.38
(A3Q9U4) RecName: Full=Protoheme IX farnesyltransferase 2; ... 39 0.38
(B7JK33) RecName: Full=Protoheme IX farnesyltransferase; ... 39 0.38
(Q3K773) RecName: Full=Protoheme IX farnesyltransferase 2; ... 39 0.38
(B7IVI2) RecName: Full=Protoheme IX farnesyltransferase; ... 39 0.38
CP000667_3040(CP000667|pid:none) Salinispora tropica CNB-440, co... 39 0.38
AF321090_5(AF321090|pid:none) Pseudomonas putida cytochrome o ub... 39 0.38
CP000485_3384(CP000485|pid:none) Bacillus thuringiensis str. Al ... 39 0.38
(A6WU49) RecName: Full=Protoheme IX farnesyltransferase 2; ... 39 0.50
AP009179_1522(AP009179|pid:none) Sulfurovum sp. NBC37-1 genomic ... 39 0.50
(Q7S5E7) RecName: Full=Protoheme IX farnesyltransferase, mitocho... 39 0.50
(Q0HDK5) RecName: Full=Protoheme IX farnesyltransferase 1; ... 39 0.50
(A9KV13) RecName: Full=Protoheme IX farnesyltransferase 2; ... 39 0.50
(Q82VQ6) RecName: Full=Protoheme IX farnesyltransferase; ... 38 0.65
(A1RE49) RecName: Full=Protoheme IX farnesyltransferase 1; ... 38 0.65
(A8H9S9) RecName: Full=Protoheme IX farnesyltransferase; ... 38 0.65
(Q8E8P7) RecName: Full=Protoheme IX farnesyltransferase; ... 38 0.65
(A4YC85) RecName: Full=Protoheme IX farnesyltransferase 2; ... 38 0.85
AP008955_2700(AP008955|pid:none) Brevibacillus brevis NBRC 10059... 38 0.85
BC158428_1(BC158428|pid:none) Xenopus tropicalis hypothetical pr... 38 0.85
(Q8D350) RecName: Full=Protoheme IX farnesyltransferase; ... 38 0.85
AP007157_644(AP007157|pid:none) Aspergillus oryzae RIB40 genomic... 38 0.85
CP001252_4049(CP001252|pid:none) Shewanella baltica OS223, compl... 38 0.85
EU016633_38(EU016633|pid:none) Uncultured Group I marine crenarc... 37 1.1
(Q0HPV6) RecName: Full=Protoheme IX farnesyltransferase 1; ... 37 1.1
(A1QRH1) RecName: Full=Protoheme IX farnesyltransferase; ... 37 1.1
AE016823_267(AE016823|pid:none) Leptospira interrogans serovar C... 37 1.4
(B0JGA8) RecName: Full=Protoheme IX farnesyltransferase; ... 37 1.4
AM778904_19(AM778904|pid:none) Microcystis aeruginosa PCC 7806 g... 37 1.4
(A4FBP2) RecName: Full=Protoheme IX farnesyltransferase 2; ... 37 1.9
(B1L5A4) RecName: Full=Protoheme IX farnesyltransferase; ... 37 1.9
(A2BM25) RecName: Full=Protoheme IX farnesyltransferase; ... 37 1.9

>BC134043_1(BC134043|pid:none) Danio rerio zgc:162600, mRNA (cDNA
clone MGC:162600 IMAGE:7139794), complete cds.
Length = 378

Score = 268 bits (685), Expect = 3e-70
Identities = 128/228 (56%), Positives = 166/228 (72%)
Frame = +3

Query: 459 GCVINDMADYKFDSKVERTKTRPIASKQLTHKQSLIFLGGQLLASFGLILSSLNYYTIAL 638
GC INDM D FD KV RT TRPIAS +T Q+L+FLGGQL + G++LS LNYY+IAL
Sbjct: 134 GCTINDMWDKDFDKKVSRTATRPIASGDITRFQALVFLGGQLSLALGVLLS-LNYYSIAL 192

Query: 639 CASSLPIVVLYPFMKRFTYYPQFVLGLAFNWGALAGYSAIAGSCNWSIVAPLYLAGISWT 818
A+SL +VV YP MKR TY+PQF+LGL FNWGAL G+SA+ GSC+WS+ PLY++G+ WT
Sbjct: 193 GAASLSLVVTYPLMKRITYWPQFILGLTFNWGALLGWSAVKGSCDWSVCLPLYVSGVMWT 252

Query: 819 MVYDTIYAHQDKRDDILVGVKSTALKFAEKSRIILSVFSGLVISGMFLTGIAANMPLFYY 998
++YDTIYAHQDK DD+ VGVKSTAL+F E +++ LS F+G ++SG+ L G+ A+ YY
Sbjct: 253 LIYDTIYAHQDKDDDLKVGVKSTALRFQENTKLWLSGFTGAMLSGLLLAGVNADQTAPYY 312

Query: 999 LGTAACSSHLIWQLKTVDFNNPSSCLEKFISNKNFGLYFLLIIIVSKL 1142
+A + HL Q+ +VD N P C +KF SN+N GL L I+ L
Sbjct: 313 CAVSAVALHLAHQIYSVDINRPEDCWKKFASNRNLGLLLFLGIVAGNL 360

Lambda K H
0.318 0.134 0.401

Gapped
Lambda K H
0.267 0.0410 0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3236559
Number of Hits to DB: 1,336,572,788
Number of extensions: 22808246
Number of successful extensions: 70042
Number of sequences better than 10.0: 544
Number of HSP's gapped: 69384
Number of HSP's successfully gapped: 545
Length of query: 410
Length of database: 1,051,180,864
Length adjustment: 131
Effective length of query: 279
Effective length of database: 627,191,635
Effective search space: 174986466165
Effective search space used: 174986466165
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)

PSORT

psg: 0.80 gvh: 0.38 alm: 0.26 top: 0.30 tms: 0.27 mit: 0.40 mip: 0.00
nuc: 0.00 erl: 0.00 erm: 0.00 pox: 0.00 px2: 0.00 vac: 0.00 rnp: 0.00
act: 0.00 caa: 0.00 yqr: 0.00 tyr: 0.00 leu: 0.00 gpi: 0.00 myr: 0.00
dna: 0.00 rib: 0.00 bac: 0.00 m1a: 0.00 m1b: 0.00 m2 : 0.00 mNt: 0.00
m3a: 1.00 m3b: 0.00 m_ : 0.00

28.0 %: mitochondrial
28.0 %: endoplasmic reticulum
20.0 %: plasma membrane
8.0 %: extracellular, including cell wall
8.0 %: nuclear
4.0 %: Golgi
4.0 %: vesicles of secretory system

>> prediction for Contig-U00653-1 is mit

VS (DIR, S) 0
VH (FL, L) 0
VF (FL, S) 0
AH (FL, L) 0
AF (FL, S) 1
SL (DIR, L) 0
SS (DIR, S) 1
SH (FL, L) 0
SF (FL, S) 0
CH (FL, L) 0
CF (FL, S) 0
FCL (DIR, L) 0
FC (DIR, S) 0
FC-IC (SUB) 0