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Dicty_cDB
Contig List | Clone List | cDNA Library List
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NBDC - LSDB Archive
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Dicty_cDB
Contig List | Clone List | cDNA Library List
Atlas
Atlas | Atlas Image List
Contig-U14382-1
Contig ID Contig-U14382-1
Contig update 2002.12.18
Contig sequence 
>Contig-U14382-1 (Contig-U14382-1Q) /CSM_Contig/Contig-U14382-1Q.Seq.d
NNNNNNNNNNAAAAAATTTGCAAATCCATTGTCTTTTCCTCATGAATTTA
GGNCAAATTTACATAAATCAACATTTTTAGACGCAAGTTTATTAGAATTA
CCAAATATAAGTGTTGATAAAACTAAAAATGAAAATAATTTTTCAATCNC
TGATAAAATTTTAATGGAGAGTTTAAAAGAAAATGAGTTCAAAATAAGAG
AGTTCATTAAAAACCAAGAAAGTGGAAATAGAGTTTTAATGATTGATAAA
AATTCTTTAAAAGAATTATTTAATATTAATGATAATCAGGCTTTGGATTT
AATATTCAATCAATATGTTCNATCTNCAAGGCCAAATTTAATTAGAAAAT
CNAGTAATAGTAGTTTAAATATAGNTTTAAAAAAAGGNATTNAAAAAAAA
ACAAAANNNTCAAGNGAATCATTTT
Gap no gap
Contig length 425
Chromosome number (1..6, M) 5
Chromosome length 5062330
Start point 4958608
End point 4958193
Strand (PLUS/MINUS) MINUS
Number of clones 1
Number of EST 1
Link to clone list U14382
List of clone(s) 

est1=CHK721Z,1,416
Translated Amino Acid sequence 
XXXKKFANPLSFPHEFRXNLHKSTFLDASLLELPNISVDKTKNENNFSIXDKILMESLKE
NEFKIREFIKNQESGNRVLMIDKNSLKELFNINDNQALDLIFNQYVXSXRPNLIRKSSNS
SLNIXLKKGIXKKTKXSXESF
Translated Amino Acid sequence (All Frames) 
Frame A:
xxxxkicksivfss*i*xkft*inifrrkfiritkykc**n*k*k*ffnx**nfngefkr
k*vqnkrvh*kprkwk*sfnd**kffkrii*y***sgfgfniqsicsixkakfn*kix**
*fkyxfkkrxxkknkxxkxii


Frame B:
XXXKKFANPLSFPHEFRXNLHKSTFLDASLLELPNISVDKTKNENNFSIXDKILMESLKE
NEFKIREFIKNQESGNRVLMIDKNSLKELFNINDNQALDLIFNQYVXSXRPNLIRKSSNS
SLNIXLKKGIXKKTKXSXESF


Frame C:
xxxknlqihclflmnlgqiyinqhf*tqvy*nyqi*vliklkmkiifqslikf*wrv*kk
mssk*esslktkkveief**likil*knylilmiirlwi*ysinmfxlqgqi*lenxviv
v*i*x*kkxxkkkqxxqxnhf
own update 2004. 6.10
Homology vs CSM-cDNA 
Query= Contig-U14382-1 (Contig-U14382-1Q)
/CSM_Contig/Contig-U14382-1Q.Seq.d
         (425 letters)

Database: CSM
           6905 sequences; 5,674,871 total letters


                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

Contig-U14382-1 (Contig-U14382-1Q) /CSM_Contig/Conti...   694  0.0
Contig-U02210-1 (Contig-U02210-1Q) /CSM_Contig/Conti...    44  1e-04
Contig-U05703-1 (Contig-U05703-1Q) /CSM_Contig/Conti...    40  0.002
Contig-U13620-1 (Contig-U13620-1Q) /CSM_Contig/Conti...    36  0.029
Contig-U11771-1 (Contig-U11771-1Q) /CSM_Contig/Conti...    36  0.029
Contig-U11453-1 (Contig-U11453-1Q) /CSM_Contig/Conti...    36  0.029
Contig-U11284-1 (Contig-U11284-1Q) /CSM_Contig/Conti...    36  0.029
Contig-U10831-1 (Contig-U10831-1Q) /CSM_Contig/Conti...    36  0.029
Contig-U05712-1 (Contig-U05712-1Q) /CSM_Contig/Conti...    36  0.029

>Contig-U14382-1 (Contig-U14382-1Q) /CSM_Contig/Contig-U14382-1Q.Seq.d
          Length = 425

 Score =  694 bits (350), Expect = 0.0
 Identities = 368/368 (100%)
 Strand = Plus / Plus

                                                                       
Query: 11  aaaaaatttgcaaatccattgtcttttcctcatgaatttaggncaaatttacataaatca 70
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11  aaaaaatttgcaaatccattgtcttttcctcatgaatttaggncaaatttacataaatca 70

                                                                       
Query: 71  acatttttagacgcaagtttattagaattaccaaatataagtgttgataaaactaaaaat 130
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 71  acatttttagacgcaagtttattagaattaccaaatataagtgttgataaaactaaaaat 130

                                                                       
Query: 131 gaaaataatttttcaatcnctgataaaattttaatggagagtttaaaagaaaatgagttc 190
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 131 gaaaataatttttcaatcnctgataaaattttaatggagagtttaaaagaaaatgagttc 190

                                                                       
Query: 191 aaaataagagagttcattaaaaaccaagaaagtggaaatagagttttaatgattgataaa 250
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 191 aaaataagagagttcattaaaaaccaagaaagtggaaatagagttttaatgattgataaa 250

                                                                       
Query: 251 aattctttaaaagaattatttaatattaatgataatcaggctttggatttaatattcaat 310
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 251 aattctttaaaagaattatttaatattaatgataatcaggctttggatttaatattcaat 310

                                                                       
Query: 311 caatatgttcnatctncaaggccaaatttaattagaaaatcnagtaatagtagtttaaat 370
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 311 caatatgttcnatctncaaggccaaatttaattagaaaatcnagtaatagtagtttaaat 370

                   
Query: 371 atagnttt 378
           ||||||||
Sbjct: 371 atagnttt 378


>Contig-U02210-1 (Contig-U02210-1Q) /CSM_Contig/Contig-U02210-1Q.Seq.d
          Length = 1136

 Score = 44.1 bits (22), Expect = 1e-04
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 265 attatttaatattaatgataat 286
           ||||||||||||||||||||||
Sbjct: 258 attatttaatattaatgataat 279


>Contig-U05703-1 (Contig-U05703-1Q) /CSM_Contig/Contig-U05703-1Q.Seq.d
          Length = 1001

 Score = 40.1 bits (20), Expect = 0.002
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 124 taaaaatgaaaataattttt 143
           ||||||||||||||||||||
Sbjct: 779 taaaaatgaaaataattttt 760


 Score = 30.2 bits (15), Expect = 1.8
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                          
Query: 264 aattatttaatatta 278
           |||||||||||||||
Sbjct: 24  aattatttaatatta 38


  Database: CSM
    Posted date:  Jun 9, 2004  7:35 PM
  Number of letters in database: 5,674,871
  Number of sequences in database:  6905
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 9396
Number of Sequences: 6905
Number of extensions: 9396
Number of successful extensions: 1187
Number of sequences better than 10.0: 393
length of query: 425
length of database: 5,674,871
effective HSP length: 16
effective length of query: 409
effective length of database: 5,564,391
effective search space: 2275835919
effective search space used: 2275835919
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 14 (28.2 bits)
dna update 2008.12.21
Homology vs DNA 
Query= Contig-U14382-1 (Contig-U14382-1Q) /CSM_Contig/Contig-U14382-1Q.Seq.d
         (425 letters)

Database: ddbj_A
           92,845,959 sequences; 95,242,211,685 total letters

Searching..................................................done

                                                             Score    E
Sequences producing significant alignments:                  (bits) Value  N

(BJ382173) Dictyostelium discoideum cDNA clone:ddc43j05, 3' ...   694   0.0    1
(AY224390) Dictyostelium discoideum superoxide-generating NA...   375   0.0    2
(CP000942) Ureaplasma parvum serovar 3 str. ATCC 27815, comp...    36   0.003  11
(AC231299) Nomascus leucogenys leucogenys clone CH271-312K12...    54   0.004  1
(AC207852) Nomascus leucogenys leucogenys clone CH271-447H11...    54   0.004  1
(AL844506) Plasmodium falciparum chromosome  7.                    36   0.007  13
(AM101329) Lutzomyia longipalpis EST clone NSFM-72e02, seque...    52   0.016  1
(AL844507) Plasmodium falciparum chromosome 8.                     34   0.051  16
(AE013218) Buchnera aphidicola str. Sg (Schizaphis graminum)...    36   0.057  10
(AC098863) Homo sapiens BAC clone RP11-347I16 from 4, comple...    50   0.064  1
(AC080151) Homo sapiens chromosome 4 clone RP11-411O17 map 4...    50   0.064  1
(EK034553) 1092959419905 Global-Ocean-Sampling_GS-31-01-01-1...    44   0.11   2
(BD452566) Diagnosis of Diseases Associated with tumor suppr...    32   0.11   4
(AX251045) Sequence 13 from Patent WO0168912.                      32   0.11   4
(AC118857) Rattus norvegicus clone CH230-247P24, WORKING DRA...    38   0.15   2
(AC111844) Rattus norvegicus clone CH230-277I3, WORKING DRAF...    38   0.15   2
(CP000263) Buchnera aphidicola str. Cc (Cinara cedri), compl...    34   0.16   11
(AL445563) Mycoplasma pulmonis (strain UAB CTIP) complete ge...    40   0.17   9
(AC116957) Dictyostelium discoideum chromosome 2 map 1685067...    36   0.21   9
(AX392735) Sequence 25 from Patent WO0212526.                      32   0.21   6
(AR707082) Sequence 25 from patent US 6933145.                     32   0.21   6
(AC152964) Medicago truncatula chromosome 8 clone mth2-82o6 ...    48   0.25   1
(AC225330) Solanum lycopersicum chromosome 9 clone C09SLm014...    48   0.25   1
(AC173964) Medicago truncatula chromosome 8 clone mth2-46d13...    48   0.25   1
(BH137379) ENTNZ81TR Entamoeba histolytica Sheared DNA Entam...    48   0.25   1
(EK397366) 1095469526204 Global-Ocean-Sampling_GS-31-01-01-1...    34   0.34   3
(AL929352) Plasmodium falciparum strain 3D7, chromosome 5, s...    34   0.38   9
(AP009757) Lotus japonicus genomic DNA, clone: LjT14D09, TM1...    36   0.41   4
(EJ423858) 1093012250070 Global-Ocean-Sampling_GS-28-01-01-1...    36   0.44   2
(CU694619) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f...    38   0.47   4
(AC116967) Dictyostelium discoideum chromosome 2 map 5481549...    40   0.52   3
(AM285317) Spiroplasma citri GII3-3X chromosome, contig Cont...    34   0.60   5
(AX196297) Sequence 4 from Patent WO0151627.                       34   0.72   9
(AF083031) Guillardia theta nucleomorph chromosome 3, comple...    34   0.81   7
(CU469464) Candidatus Phytoplasma mali strain AT complete ch...    44   0.82   10
(AJ294725) Astasia longa complete chloroplast genome.              32   0.96   6
(AL034556) Plasmodium falciparum MAL3P5.                           42   0.97   4
(BX294006) Zebrafish DNA sequence from clone CH211-145M1 in ...    46   1.0    1
(AC159826) Gallus gallus BAC clone CH261-57J20 from chromoso...    46   1.0    1
(AC157662) Gallus gallus BAC clone CH261-183P12 from chromos...    46   1.0    1
(AC219225) Solanum lycopersicum chromosome 6 clone C06SLm008...    46   1.0    1
(AC135316) Medicago truncatula clone mth2-20l8, complete seq...    46   1.0    1
(EA263357) Sequence 3 from patent US 7238100.                      46   1.0    1
(DD441737) Avian Transgenesis Using a Chicken Ovalbumin Gene...    46   1.0    1
(DD420017) Gene constructs for expressing protein in oviduct...    46   1.0    1
(DD420010) Gene constructs for expressing protein in oviduct...    46   1.0    1
(DD420008) Gene constructs for expressing protein in oviduct...    46   1.0    1
(DD135017) Molecular Typing of Group B Streptococci.               46   1.0    1
(BD166249) Beta-1,3-galactosyltransferase and DNA encoding t...    46   1.0    1
(AR613460) Sequence 3 from patent US 6828128.                      46   1.0    1
(AC153736) Otolemur garnettii clone CH256-152M16, WORKING DR...    46   1.0    1
(AC138579) Medicago truncatula clone mth2-7b13, WORKING DRAF...    46   1.0    1
(AC111819) Rattus norvegicus clone CH230-50M22, WORKING DRAF...    46   1.0    1
(CU651653) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f...    46   1.0    1
(CT971484) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f...    46   1.0    1
(AC214015) Macaca mulatta clone CH250-157E19, WORKING DRAFT ...    46   1.0    1
(BH234978) MHAA_F06.y Spiroplasma kunkelii H Spiroplasma kun...    46   1.0    1
(EJ927676) 1093018789389 Global-Ocean-Sampling_GS-30-02-01-1...    46   1.0    1
(EJ321224) 1095403371303 Global-Ocean-Sampling_GS-27-01-01-1...    46   1.0    1
(CZ987401) 201867 Tomato MboI BAC Library Solanum lycopersic...    46   1.0    1
(EC978923) WIN109.C21_F11 Muscat Hamburg post-veraison peric...    46   1.0    1
(AY528560) Spiroplasma kunkelii strain CR2-3x plasmid pSKU14...    46   1.0    1
(AJ969074) Spiroplasma citri plasmid pSci6.                        46   1.0    1
(AF332917) Streptococcus agalactiae strain SG99/477 capsular...    46   1.0    1
(AF332916) Streptococcus agalactiae strain NCDC SS618 capsul...    46   1.0    1
(AF332915) Streptococcus agalactiae strain H36B capsular pol...    46   1.0    1
(AE000783) Borrelia burgdorferi B31, complete genome.              46   1.0    1
(AB050723) Streptococcus agalactiae cpsIbD, cpsIbF, cpsIbG, ...    46   1.0    1
(ER427498) 1092963760889 Global-Ocean-Sampling_GS-35-01-01-1...    42   1.0    2
(CE219713) tigr-gss-dog-17000326876921 Dog Library Canis lup...    36   1.0    2
(AC180001) Strongylocentrotus purpuratus clone R3-3036L24, W...    38   1.1    4
(EJ809692) 1093017483294 Global-Ocean-Sampling_GS-30-02-01-1...    36   1.1    3
(AC132833) Mus musculus chromosome 15, clone RP24-498G7, com...    38   1.2    4
(EJ174595) 1092344095933 Global-Ocean-Sampling_GS-27-01-01-1...    40   1.2    2
(EJ814549) 1093017508062 Global-Ocean-Sampling_GS-30-02-01-1...    36   1.2    3
(AG298608) Mus musculus molossinus DNA, clone:MSMg01-075O11....    40   1.2    2
(AG301269) Mus musculus molossinus DNA, clone:MSMg01-080G18....    40   1.2    2
(AC171138) Helobdella robusta clone CH306-1A9, complete sequ...    38   1.3    4
(EJ611467) 1092962048315 Global-Ocean-Sampling_GS-29-01-01-1...    34   1.4    2
(EK154465) 1095456067774 Global-Ocean-Sampling_GS-31-01-01-1...    42   1.4    2
(EJ376760) 1092963745105 Global-Ocean-Sampling_GS-28-01-01-1...    32   1.4    3
(EK233554) 1095460190812 Global-Ocean-Sampling_GS-31-01-01-1...    38   1.5    2
(EJ325339) 1092405876099 Global-Ocean-Sampling_GS-28-01-01-1...    36   1.5    2
(AM467695) Vitis vinifera contig VV78X054113.7, whole genome...    30   1.5    7
(EJ064986) 1095458032320 Global-Ocean-Sampling_GS-26-01-01-1...    38   1.5    2
(AC027556) Homo sapiens chromosome 17 clone RP11-81O13 map 1...    38   1.6    3
(AX392733) Sequence 23 from Patent WO0212526.                      32   1.6    5
(AR707080) Sequence 23 from patent US 6933145.                     32   1.6    5
(ER326115) 1092344213929 Global-Ocean-Sampling_GS-34-01-01-1...    34   1.6    2
(AC160546) Mus musculus chromosome 3 clone RP23-224K13 map 3...    42   1.6    6
(EJ515952) 1092955091748 Global-Ocean-Sampling_GS-29-01-01-1...    42   1.6    2
(CG062678) PUJCB70TD ZM_0.6_1.0_KB Zea mays genomic clone ZM...    42   1.6    2
(EJ615153) 1092963013178 Global-Ocean-Sampling_GS-29-01-01-1...    34   1.6    2
(BD455614) Listeria monocytogenes genome,polypeptides and uses.    32   1.7    2
(AE017262) Listeria monocytogenes str. 4b F2365, complete ge...    32   1.7    2
(AE017308) Mycoplasma mobile 163K complete genome.                 34   1.7    11
(CU464129) Zebrafish DNA sequence from clone CH211-30M1 in l...    42   1.7    2
(AM910987) Plasmodium knowlesi strain H chromosome 5, comple...    32   1.8    2
(AC189196) Brassica rapa subsp. pekinensis clone KBrB004G11,...    38   1.8    4
(AX641672) Sequence 2862 from Patent WO0101118.                    32   1.9    2

>(BJ382173) Dictyostelium discoideum cDNA clone:ddc43j05, 3' end,
           single read.
          Length = 416

 Score =  694 bits (350), Expect = 0.0
 Identities = 368/368 (100%)
 Strand = Plus / Minus


Query: 11  aaaaaatttgcaaatccattgtcttttcctcatgaatttaggncaaatttacataaatca 70
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 416 aaaaaatttgcaaatccattgtcttttcctcatgaatttaggncaaatttacataaatca 357


Query: 71  acatttttagacgcaagtttattagaattaccaaatataagtgttgataaaactaaaaat 130
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 356 acatttttagacgcaagtttattagaattaccaaatataagtgttgataaaactaaaaat 297


Query: 131 gaaaataatttttcaatcnctgataaaattttaatggagagtttaaaagaaaatgagttc 190
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 296 gaaaataatttttcaatcnctgataaaattttaatggagagtttaaaagaaaatgagttc 237


Query: 191 aaaataagagagttcattaaaaaccaagaaagtggaaatagagttttaatgattgataaa 250
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 236 aaaataagagagttcattaaaaaccaagaaagtggaaatagagttttaatgattgataaa 177


Query: 251 aattctttaaaagaattatttaatattaatgataatcaggctttggatttaatattcaat 310
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 176 aattctttaaaagaattatttaatattaatgataatcaggctttggatttaatattcaat 117


Query: 311 caatatgttcnatctncaaggccaaatttaattagaaaatcnagtaatagtagtttaaat 370
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 116 caatatgttcnatctncaaggccaaatttaattagaaaatcnagtaatagtagtttaaat 57


Query: 371 atagnttt 378
           ||||||||
Sbjct: 56  atagnttt 49

Lambda     K      H
    1.37    0.711     1.31

Matrix: blastn matrix:1 -3
Number of Sequences: 92845959
Number of Hits to DB: 580,641,577
Number of extensions: 39973543
Number of successful extensions: 3552733
Number of sequences better than 10.0: 280
Length of query: 425
Length of database: 95,242,211,685
Length adjustment: 23
Effective length of query: 402
Effective length of database: 93,106,754,628
Effective search space: 37428915360456
Effective search space used: 37428915360456
X1: 11 (21.8 bits)
S2: 21 (42.1 bits)
protein update 2009. 7.11
Homology vs Protein 
Query= Contig-U14382-1 (Contig-U14382-1Q) /CSM_Contig/Contig-U14382-1Q.Seq.d
         (425 letters)

Database: nrp_B
           3,236,559 sequences; 1,051,180,864 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AP009552_1104(AP009552|pid:none) Microcystis aeruginosa NIES-843...    38   0.13
AE009950_508(AE009950|pid:none) Pyrococcus furiosus DSM 3638, co...    36   0.49
(Q54FD2) RecName: Full=Probable polyketide synthase 38;         ...    35   0.64
(Q5HMG0) RecName: Full=Ketol-acid reductoisomerase;          EC=...    33   2.4
AL034559_35(AL034559|pid:none) Plasmodium falciparum MAL3P7, com...    33   3.2
CP000411_956(CP000411|pid:none) Oenococcus oeni PSU-1, complete ...    33   4.1
CP000770_133(CP000770|pid:none) Candidatus Sulcia muelleri GWSS,...    32   5.4
AL844509_627(AL844509|pid:none) Plasmodium falciparum 3D7 chromo...    32   5.4
AE014188_88(AE014188|pid:none) Plasmodium falciparum 3D7 chromos...    32   5.4
CP001034_347(CP001034|pid:none) Natranaerobius thermophilus JW/N...    32   5.4
AE014185_76(AE014185|pid:none) Plasmodium falciparum 3D7 chromos...    32   5.4
AF072714_2(AF072714|pid:none) Mycoplasma mycoides mycoides LC pu...    32   5.4
AE009951_904(AE009951|pid:none) Fusobacterium nucleatum subsp. n...    32   5.4
CP000932_845(CP000932|pid:none) Campylobacter lari RM2100, compl...    32   7.0
DQ158856_95(DQ158856|pid:none) Bigelowiella natans nucleomorph c...    32   7.0
AF091239_1(AF091239|pid:none) Plasmodium falciparum c-13 antigen...    32   7.0
(P75341) RecName: Full=Uncharacterized protein MPN_437;  &S73730...    32   7.0
EU016567_41(EU016567|pid:none) Uncultured marine microorganism H...    32   7.0
AE017194_2457(AE017194|pid:none) Bacillus cereus ATCC 10987, com...    32   9.2
AM982810_1(AM982810|pid:none) Neisseria meningitidis siaD-Y gene...    32   9.2
CP001104_881(CP001104|pid:none) Eubacterium eligens ATCC 27750, ...    32   9.2
FJ860267_1(FJ860267|pid:none) Tachypleus tridentatus mitochondri...    32   9.2

>AP009552_1104(AP009552|pid:none) Microcystis aeruginosa NIES-843
           DNA, complete genome.
          Length = 132

 Score = 37.7 bits (86), Expect = 0.13
 Identities = 22/65 (33%), Positives = 35/65 (53%), Gaps = 2/65 (3%)
 Frame = -3

Query: 279 LILNNSFKEFL--SIIKTLFPLSWFLMNSLILNSFSFKLSIKILSXIEKLFSFLVLSTLI 106
           L   + F  FL   ++ TLF   +FL  SLIL   ++K ++ + + I  LF+F     L+
Sbjct: 3   LFQKSKFARFLLVGVLNTLF--GYFLYGSLILIGLNYKYAVLLATIIGVLFNFQTTGRLV 60

Query: 105 FGNSN 91
           FG+ N
Sbjct: 61  FGSKN 65

Lambda     K      H
   0.318    0.134    0.401

Gapped
Lambda     K      H
   0.267   0.0410    0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3236559
Number of Hits to DB: 420,154,270
Number of extensions: 5788915
Number of successful extensions: 21298
Number of sequences better than 10.0: 22
Number of HSP's gapped: 21260
Number of HSP's successfully gapped: 24
Length of query: 141
Length of database: 1,051,180,864
Length adjustment: 104
Effective length of query: 37
Effective length of database: 714,578,728
Effective search space: 26439412936
Effective search space used: 26439412936
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 29 (15.8 bits)
PSORT 

 psg: 0.83  gvh: 0.33  alm: 0.51  top: 0.53  tms: 0.00  mit: 0.32  mip: 0.00
 nuc: 0.00  erl: 0.00  erm: 0.00  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 1.00 

	 40.0 %: cytoplasmic
	 32.0 %: nuclear
	 16.0 %: mitochondrial
	  4.0 %: cytoskeletal
	  4.0 %: plasma membrane
	  4.0 %: peroxisomal

>> prediction for Contig-U14382-1 is cyt
VS (DIR, S) 0
VH (FL, L) 0
VF (FL, S) 0
AH (FL, L) 0
AF (FL, S) 0
SL (DIR, L) 0
SS (DIR, S) 0
SH (FL, L) 0
SF (FL, S) 0
CH (FL, L) 1
CF (FL, S) 0
FCL (DIR, L) 0
FC (DIR, S) 0
FC-IC (SUB) 0