Contig-U02610-1
Contig ID Contig-U02610-1
Contig update 2001. 8.29
Contig sequence
>Contig-U02610-1 (Contig-U02610-1Q) /CSM_Contig/Contig-U02610-1Q.Seq.d
TATTATTAGTGGAATTTTCAATATAGTAGCATTATTATTTATTGGGAAAT
ATTTAGAACCAATATGGGGTTCAAGAGAATTTATAAAGTTTATATTAGTA
GTAATTTTCTTTTCAAGTTTATGTTCATTCTTTTTCTTTGTATTTAAATT
TATGTTTTTTGGTGGTATTGATCTTATAATGAAAGCAAATGTTTGTGGAT
TTTCAGGTGTTATAGCAGCATTTTCAGTTGCATTGAAACAATTAATAACA
GAACAAGAATTTAATTTCTTTTTAATAAAGATTAGAGCAAAATGGATACC
ATTTATATTGATTTTATTTAGAGTGATTGTATTTTCATTCATTGGATTTC
AAGACAGATCATTCACATTGGTCATTTATGGTGTATTTATAGCTTGGATT
TATTTAAGATTTTATCAAGTTAAATCTGGTGTAAAAGGTGATCTTAATGA
ATCTTTTTCATTTTATACATTTTTCCCTGACCCAGTACAAGCACCAATTA
AAGTTATTTCAAATATAGTATTTAAAATTCTTTGTAAATTATCAATATGT
TCATCATCAAGATTTTCAAATCAATCAATTTTACCAACAACAAATAATAA
TAATATTAATAACAATGATGATAGCTATAATGTAGCTGATATGGAGAGAA
GAAGAGCATTAGCTGTTAAAGCTCTTGAAGAAA

Gap no gap
Contig length 683
Chromosome number (1..6, M) 3
Chromosome length 6358359
Start point 201958
End point 201275
Strand (PLUS/MINUS) MINUS
Number of clones 3
Number of EST 3
Link to clone list U02610
List of clone(s)

est1=SFD493Z,1,673
est2=CFH455Z,71,684
est3=AFE803Z,138,672
Translated Amino Acid sequence
IISGIFNIVALLFIGKYLEPIWGSREFIKFILVVIFFSSLCSFFFFVFKFMFFGGIDLIM
KANVCGFSGVIAAFSVALKQLITEQEFNFFLIKIRAKWIPFILILFRVIVFSFIGFQDRS
FTLVIYGVFIAWIYLRFYQVKSGVKGDLNESFSFYTFFPDPVQAPIKVISNIVFKILCKL
SICSSSRFSNQSILPTTNNNNINNNDDSYNVADMERRRALAVKALEE


Translated Amino Acid sequence (All Frames)
Frame A:
yy*wnfqyssiiiyweifrtnmgfkriykvyissnflfkfmfilflci*iyvfwwy*syn
eskclwifrcyssifscietinnrtri*flfnkd*skmdtiyidfi*sdcifihwisrqi
ihighlwciysldlfkilss*iwckr*s**iffilyifp*pststn*syfkysi*nsl*i
inmfiikifksinftnnk***y**q***l*cs*ygekksisc*ss*r


Frame B:
IISGIFNIVALLFIGKYLEPIWGSREFIKFILVVIFFSSLCSFFFFVFKFMFFGGIDLIM
KANVCGFSGVIAAFSVALKQLITEQEFNFFLIKIRAKWIPFILILFRVIVFSFIGFQDRS
FTLVIYGVFIAWIYLRFYQVKSGVKGDLNESFSFYTFFPDPVQAPIKVISNIVFKILCKL
SICSSSRFSNQSILPTTNNNNINNNDDSYNVADMERRRALAVKALEE


Frame C:
llvefsi**hyyllgni*nqygvqenl*sly***fsfqvyvhsfslylnlcflvvlil**
kqmfvdfqvl*qhfqlh*nn**qnknlisf**rleqngyhly*fyle*lyfhsldfktdh
shwsfmvyl*lgfi*dfiklnlv*kvilmnlfhfihfsltqykhqlklfqi*ylkffvny
qyvhhqdfqinqfyqqqiiiilitmmiaim*liwreeeh*llkllkk


own update 2004. 6. 9
Homology vs CSM-cDNA
Query= Contig-U02610-1 (Contig-U02610-1Q)
/CSM_Contig/Contig-U02610-1Q.Seq.d
(683 letters)

Database: CSM
6905 sequences; 5,674,871 total letters


Score E
Sequences producing significant alignments: (bits) Value

Contig-U02610-1 (Contig-U02610-1Q) /CSM_Contig/Conti... 1037 0.0
Contig-U14745-1 (Contig-U14745-1Q) /CSM_Contig/Conti... 48 1e-05
Contig-U11910-1 (Contig-U11910-1Q) /CSM_Contig/Conti... 48 1e-05
Contig-U10150-1 (Contig-U10150-1Q) /CSM_Contig/Conti... 48 1e-05
Contig-U13176-1 (Contig-U13176-1Q) /CSM_Contig/Conti... 46 5e-05
Contig-U13062-1 (Contig-U13062-1Q) /CSM_Contig/Conti... 46 5e-05
Contig-U12521-1 (Contig-U12521-1Q) /CSM_Contig/Conti... 46 5e-05
Contig-U11697-1 (Contig-U11697-1Q) /CSM_Contig/Conti... 46 5e-05
Contig-U11262-1 (Contig-U11262-1Q) /CSM_Contig/Conti... 46 5e-05
Contig-U11154-1 (Contig-U11154-1Q) /CSM_Contig/Conti... 46 5e-05

>Contig-U02610-1 (Contig-U02610-1Q) /CSM_Contig/Contig-U02610-1Q.Seq.d
Length = 683

Score = 1037 bits (523), Expect = 0.0
Identities = 523/523 (100%)
Strand = Plus / Plus


Query: 161 ggtggtattgatcttataatgaaagcaaatgtttgtggattttcaggtgttatagcagca 220
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 161 ggtggtattgatcttataatgaaagcaaatgtttgtggattttcaggtgttatagcagca 220


Query: 221 ttttcagttgcattgaaacaattaataacagaacaagaatttaatttctttttaataaag 280
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 221 ttttcagttgcattgaaacaattaataacagaacaagaatttaatttctttttaataaag 280


Query: 281 attagagcaaaatggataccatttatattgattttatttagagtgattgtattttcattc 340
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 281 attagagcaaaatggataccatttatattgattttatttagagtgattgtattttcattc 340


Query: 341 attggatttcaagacagatcattcacattggtcatttatggtgtatttatagcttggatt 400
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 341 attggatttcaagacagatcattcacattggtcatttatggtgtatttatagcttggatt 400


Query: 401 tatttaagattttatcaagttaaatctggtgtaaaaggtgatcttaatgaatctttttca 460
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 401 tatttaagattttatcaagttaaatctggtgtaaaaggtgatcttaatgaatctttttca 460


Query: 461 ttttatacatttttccctgacccagtacaagcaccaattaaagttatttcaaatatagta 520
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 461 ttttatacatttttccctgacccagtacaagcaccaattaaagttatttcaaatatagta 520


Query: 521 tttaaaattctttgtaaattatcaatatgttcatcatcaagattttcaaatcaatcaatt 580
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 521 tttaaaattctttgtaaattatcaatatgttcatcatcaagattttcaaatcaatcaatt 580


Query: 581 ttaccaacaacaaataataataatattaataacaatgatgatagctataatgtagctgat 640
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 581 ttaccaacaacaaataataataatattaataacaatgatgatagctataatgtagctgat 640


Query: 641 atggagagaagaagagcattagctgttaaagctcttgaagaaa 683
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 641 atggagagaagaagagcattagctgttaaagctcttgaagaaa 683


Score = 204 bits (103), Expect = 9e-53
Identities = 103/103 (100%)
Strand = Plus / Plus


Query: 1 tattattagtggaattttcaatatagtagcattattatttattgggaaatatttagaacc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tattattagtggaattttcaatatagtagcattattatttattgggaaatatttagaacc 60


Query: 61 aatatggggttcaagagaatttataaagtttatattagtagta 103
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 aatatggggttcaagagaatttataaagtttatattagtagta 103


>Contig-U14745-1 (Contig-U14745-1Q) /CSM_Contig/Contig-U14745-1Q.Seq.d
Length = 1780

Score = 48.1 bits (24), Expect = 1e-05
Identities = 27/28 (96%)
Strand = Plus / Plus


Query: 585 caacaacaaataataataatattaataa 612
||||||||||||||||||||| ||||||
Sbjct: 720 caacaacaaataataataataataataa 747


Score = 32.2 bits (16), Expect = 0.75
Identities = 19/20 (95%)
Strand = Plus / Plus


Query: 593 aataataataatattaataa 612
||||||||||||| ||||||
Sbjct: 731 aataataataataataataa 750


Score = 32.2 bits (16), Expect = 0.75
Identities = 19/20 (95%)
Strand = Plus / Plus


Query: 593 aataataataatattaataa 612
||||||||||||| ||||||
Sbjct: 146 aataataataataataataa 165


Score = 30.2 bits (15), Expect = 3.0
Identities = 15/15 (100%)
Strand = Plus / Plus


Query: 598 taataatattaataa 612
|||||||||||||||
Sbjct: 47 taataatattaataa 61


>Contig-U11910-1 (Contig-U11910-1Q) /CSM_Contig/Contig-U11910-1Q.Seq.d
Length = 763

Score = 48.1 bits (24), Expect = 1e-05
Identities = 27/28 (96%)
Strand = Plus / Plus


Query: 585 caacaacaaataataataatattaataa 612
||||||||||||||||||||| ||||||
Sbjct: 632 caacaacaaataataataataataataa 659


Score = 30.2 bits (15), Expect = 3.0
Identities = 18/19 (94%)
Strand = Plus / Minus


Query: 445 taatgaatctttttcattt 463
||||| |||||||||||||
Sbjct: 483 taatgcatctttttcattt 465


Database: CSM
Posted date: Jun 9, 2004 7:35 PM
Number of letters in database: 5,674,871
Number of sequences in database: 6905

Lambda K H
1.37 0.711 1.31

Gapped
Lambda K H
1.37 0.711 1.31


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 27,855
Number of Sequences: 6905
Number of extensions: 27855
Number of successful extensions: 11285
Number of sequences better than 10.0: 1423
length of query: 683
length of database: 5,674,871
effective HSP length: 16
effective length of query: 667
effective length of database: 5,564,391
effective search space: 3711448797
effective search space used: 3711448797
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 15 (30.2 bits)
dna update 2009. 5.19
Homology vs DNA
Query= Contig-U02610-1 (Contig-U02610-1Q) /CSM_Contig/Contig-U02610-1Q.Seq.d
(683 letters)

Database: ddbj_A
102,105,510 sequences; 101,790,757,118 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value N

(BJ399881) Dictyostelium discoideum cDNA clone:dds7j24, 3' e... 1017 0.0 2
(BJ373088) Dictyostelium discoideum cDNA clone:ddc15n14, 3' ... 957 0.0 3
(BJ339697) Dictyostelium discoideum cDNA clone:dda10f02, 3' ... 1007 0.0 1
(AE014849) Plasmodium falciparum 3D7 chromosome 12, section ... 40 2e-05 8
(CU571160) Zebrafish DNA sequence from clone CH73-160J1 in l... 62 3e-05 1
(CR382400) Plasmodium falciparum chromosome 6, complete sequ... 48 6e-05 9
(CR450713) Zebrafish DNA sequence from clone DKEY-264H9 in l... 60 1e-04 1
(CU856025) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 60 1e-04 1
(CU656014) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 60 1e-04 1
(AC115604) Dictyostelium discoideum chromosome 2 map 4354771... 40 3e-04 7
(AE014842) Plasmodium falciparum 3D7 chromosome 11 section 7... 40 4e-04 7
(AE014817) Plasmodium falciparum 3D7 chromosome 14 section 2... 44 0.001 12
(AC168407) Strongylocentrotus purpuratus clone R3-4002F24, W... 44 0.001 2
(AC157959) Strongylocentrotus purpuratus clone R3-4002F24, W... 44 0.001 2
(CR382291) Zebrafish DNA sequence from clone CH211-245G10. 46 0.002 4
(CR759910) Zebrafish DNA sequence from clone DKEYP-79C4 in l... 48 0.002 7
(AC177043) Strongylocentrotus purpuratus clone R3-38O8, WORK... 56 0.002 1
(AC116979) Dictyostelium discoideum chromosome 2 map 6445720... 48 0.002 2
(AC219143) Monodelphis domestica clone VMRC6-348K23, WORKING... 38 0.002 7
(AP010813) Solanum lycopersicum DNA, chromosome 8, clone: C0... 40 0.002 6
(BX322662) Zebrafish DNA sequence from clone CH211-222C18 in... 54 0.004 5
(BX664719) Zebrafish DNA sequence from clone DKEY-159I6 in l... 46 0.004 2
(AC116955) Dictyostelium discoideum chromosome 2 map 5455881... 46 0.004 5
(CU469503) Zebrafish DNA sequence from clone DKEY-251J19 in ... 52 0.005 7
(CR848052) Zebrafish DNA sequence from clone DKEY-28F6 in li... 38 0.005 2
(AC179590) Strongylocentrotus purpuratus clone R3-1029I2, WO... 52 0.006 5
(CU928083) Zebrafish DNA sequence from clone CH73-134B5 in l... 36 0.006 6
(CR631124) Zebrafish DNA sequence from clone DKEY-52E24 in l... 40 0.007 7
(BJ352445) Dictyostelium discoideum cDNA clone:dda46d22, 3' ... 36 0.007 3
(CR848837) Zebrafish DNA sequence from clone DKEY-8N9 in lin... 54 0.007 1
(CR388087) Zebrafish DNA sequence from clone DKEY-19N7 in li... 54 0.007 1
(BX927185) Zebrafish DNA sequence from clone CH211-198G1 in ... 54 0.007 1
(BX548247) Zebrafish DNA sequence from clone DKEY-177G18 in ... 54 0.007 1
(BX510929) Zebrafish DNA sequence from clone CH211-261F9. 54 0.007 1
(BX119920) Zebrafish DNA sequence from clone CH211-46O21 in ... 54 0.007 1
(BX004783) Zebrafish DNA sequence from clone DKEY-14E1 in li... 54 0.007 1
(AL928976) Zebrafish DNA sequence from clone CH211-134B16 in... 54 0.007 1
(AM488340) Vitis vinifera, whole genome shotgun sequence, co... 54 0.007 1
(AM439557) Vitis vinifera contig VV78X158123.1, whole genome... 54 0.007 1
(AC151776) Ornithorhynchus anatinus chromosome UNK clone OAB... 54 0.007 1
(AC112060) Rattus norvegicus clone CH230-180E21, *** SEQUENC... 54 0.007 1
(AC108612) Rattus norvegicus clone CH230-293B15, WORKING DRA... 54 0.007 1
(CU929228) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 54 0.007 1
(AC201575) Strongylocentrotus purpuratus clone R3-4009F07, W... 54 0.007 1
(AC180388) Strongylocentrotus purpuratus clone R3-3114B7, WO... 54 0.007 1
(AC179778) Strongylocentrotus purpuratus clone R3-1015N15, W... 54 0.007 1
(AC176715) Strongylocentrotus purpuratus clone R3-3095H21, W... 54 0.007 1
(AC168743) Strongylocentrotus purpuratus clone R3-3004P24, W... 54 0.007 1
(AC168578) Strongylocentrotus purpuratus clone R3-3065J20, W... 54 0.007 1
(DX091826) AU_BAC031B2F06_Sp6 CHORI212 Ictalurus punctatus g... 54 0.007 1
(DX085086) AU_BAC006B1F09_Sp6 CHORI212 Ictalurus punctatus g... 54 0.007 1
(DH687968) Rattus norvegicus DNA, BAC clone: RNB1-243K09, 3'... 54 0.007 1
(BX210540) Danio rerio genomic clone DKEY-241O1, genomic sur... 54 0.007 1
(BX165268) Danio rerio genomic clone DKEY-168J3, genomic sur... 54 0.007 1
(EL496211) F12_PFBAMHI-M-T7-PLATE21A.AB1 Blood stage Plasmod... 54 0.007 1
(EB766497) 1957253 AG03 Danio rerio cDNA clone 764792, mRNA ... 54 0.007 1
(CX560801) ydb46b05.y2 Sea urchin EST Lib1 Strongylocentrotu... 54 0.007 1
(BU778284) SJEEBD07 SJE Schistosoma japonicum cDNA, mRNA seq... 54 0.007 1
(FM992688) Candida dubliniensis CD36 chromosome 1, complete ... 50 0.008 5
(BX323030) Zebrafish DNA sequence from clone DKEYP-77D7 in l... 40 0.008 8
(CU467851) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 48 0.008 6
(CU185242) Zebrafish DNA sequence from clone DKEY-208K14 in ... 46 0.008 4
(AF356600) Dictyostelium discoideum filament-interacting pro... 48 0.009 2
(AP000464) Homo sapiens genomic DNA, chromosome 11q, clone:P... 46 0.010 3
(AB017652) Homo sapiens genomic DNA, chromosome 11q23.2, clo... 46 0.010 3
(AB211596) Dictyostelium discoideum DrbA gene for retinoblas... 44 0.011 3
(AC115598) Dictyostelium discoideum chromosome 2 map 581427-... 48 0.013 2
(EG347739) SAAH-aac78d07.b1 Agen 0058 Schmidtea mediterranea... 42 0.013 2
(DD010736) Diagnosis of known genetic Parameters within the ... 46 0.014 10
(BX470117) Zebrafish DNA sequence from clone CH211-204N10 in... 46 0.015 3
(CU855695) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 52 0.016 3
(CU929394) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 44 0.017 3
(BX005045) Zebrafish DNA sequence from clone CH211-69C9 in l... 46 0.017 5
(AL844509) Plasmodium falciparum chromosome 13. 50 0.018 4
(CT573320) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 44 0.018 7
(AC128212) Rattus norvegicus clone CH230-490M14, WORKING DRA... 36 0.019 2
(AC176990) Strongylocentrotus purpuratus clone R3-1103B18, W... 40 0.019 2
(CR384100) Zebrafish DNA sequence from clone DKEYP-22H2 in l... 50 0.021 5
(AC005507) Plasmodium falciparum chromosome 12 clone PFYACB8... 38 0.022 6
(CR762418) Zebrafish DNA sequence from clone RP71-15A9 in li... 52 0.022 6
(BX510923) Zebrafish DNA sequence from clone CH211-214J8 in ... 40 0.022 4
(AM480219) Vitis vinifera contig VV78X070749.4, whole genome... 38 0.022 2
(AM436347) Vitis vinifera contig VV78X143219.7, whole genome... 40 0.022 2
(L36887) Saccharomyces cerevisiae mitochondrion transfer RNA... 40 0.027 4
(FP102924) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 48 0.027 5
(CU694454) Zebrafish DNA sequence from clone DKEYP-100F5 in ... 52 0.028 1
(CU651673) Zebrafish DNA sequence from clone CH1073-416M20 i... 52 0.028 1
(CU571316) Zebrafish DNA sequence from clone CH73-125N14 in ... 52 0.028 1
(CU462909) Zebrafish DNA sequence from clone RP71-8I12 in li... 52 0.028 1
(CT009676) Zebrafish DNA sequence from clone CH73-390A17 in ... 52 0.028 1
(CR855996) Zebrafish DNA sequence from clone DKEY-219B24 in ... 52 0.028 1
(CR854915) Zebrafish DNA sequence from clone DKEY-4G13 in li... 52 0.028 1
(CR352217) Zebrafish DNA sequence from clone CH211-129P13 in... 52 0.028 1
(BX640464) Zebrafish DNA sequence from clone DKEY-22M8 in li... 52 0.028 1
(BX294444) Zebrafish DNA sequence from clone CH211-281E15 in... 52 0.028 1
(BX284620) Zebrafish DNA sequence from clone CH211-218E20 in... 52 0.028 1
(BX276182) Zebrafish DNA sequence from clone CH211-283K4 in ... 52 0.028 1
(BX255942) Zebrafish DNA sequence from clone DKEY-269K6 in l... 52 0.028 1
(BX005061) Zebrafish DNA sequence from clone CH211-158F5 in ... 52 0.028 1
(AL929216) Zebrafish DNA sequence from clone CH211-138G9 in ... 52 0.028 1
(AC188944) Gallus gallus BAC clone CH261-61B9 from chromosom... 52 0.028 1
(AC186824) Gallus gallus BAC clone CH261-143N19 from chromos... 52 0.028 1
(AL627102) Mouse DNA sequence from clone RP23-291A3 on chrom... 52 0.028 1
(AC117584) Mus musculus chromosome 3, clone RP23-151D16, com... 52 0.028 1
(AP006085) Lotus japonicus genomic DNA, chromosome 4, clone:... 52 0.028 1
(AM488996) Vitis vinifera contig VV78X061225.9, whole genome... 52 0.028 1
(AM488153) Vitis vinifera contig VV78X277790.2, whole genome... 52 0.028 1
(AM478216) Vitis vinifera contig VV78X133914.16, whole genom... 52 0.028 1
(BX936293) Platypus DNA sequence from clone XX-516O5. 52 0.028 1
(AL035477) Plasmodium falciparum MAL4P4. 52 0.028 1
(AE014821) Plasmodium falciparum 3D7 chromosome 14 section 6... 52 0.028 1
(AC117082) Dictyostelium discoideum chromosome 2 map complem... 52 0.028 1
(AC105939) Homo sapiens chromosome 3 clone RP11-241A5, compl... 52 0.028 1
(AC104849) Homo sapiens chromosome 3 clone RP11-154D3, compl... 52 0.028 1
(AC153741) Ornithorhynchus anatinus clone OA_Bb-10N20, WORKI... 52 0.028 1
(AC149957) Strongylocentrotus purpuratus clone R3-32B13, WOR... 52 0.028 1
(AC139640) Rattus norvegicus clone CH230-190N14, WORKING DRA... 52 0.028 1
(AC131447) Strongylocentrotus purpuratus clone Sp154N12, ***... 52 0.028 1
(AC127627) Rattus norvegicus clone CH230-423G17, WORKING DRA... 52 0.028 1
(AC126618) Rattus norvegicus clone CH230-447J16, WORKING DRA... 52 0.028 1
(AC114128) Rattus norvegicus clone CH230-88C7, *** SEQUENCIN... 52 0.028 1
(AC098261) Rattus norvegicus clone CH230-1L10, *** SEQUENCIN... 52 0.028 1
(FP102167) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 52 0.028 1
(FP102071) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 52 0.028 1
(CU693457) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 52 0.028 1
(CU469440) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 52 0.028 1
(AC094347) Rattus norvegicus clone CH230-3K2, WORKING DRAFT ... 52 0.028 1
(AP007784) Lotus japonicus genomic DNA, chromosome 4, clone:... 52 0.028 1
(AC201378) Strongylocentrotus purpuratus clone R3-17F12, WOR... 52 0.028 1
(AC200997) Strongylocentrotus purpuratus clone R3-12D11, WOR... 52 0.028 1
(AC184670) Strongylocentrotus purpuratus clone R3-1005H19, W... 52 0.028 1
(AC181241) Strongylocentrotus purpuratus clone R3-4010K23, W... 52 0.028 1
(AC180469) Strongylocentrotus purpuratus clone R3-3011A15, W... 52 0.028 1
(AC178679) Strongylocentrotus purpuratus clone R3-12C2, WORK... 52 0.028 1
(AC177335) Strongylocentrotus purpuratus clone R3-46L21, WOR... 52 0.028 1
(AC176783) Strongylocentrotus purpuratus clone R3-3106E9, WO... 52 0.028 1
(AC174873) Strongylocentrotus purpuratus clone R3-3112M6, WO... 52 0.028 1
(AC174118) Strongylocentrotus purpuratus clone R3-36N2, WORK... 52 0.028 1
(AC173364) Strongylocentrotus purpuratus clone R3-3061J20, W... 52 0.028 1
(AC168468) Strongylocentrotus purpuratus clone R3-35C6, WORK... 52 0.028 1
(BH126744) BARC-Satt578 Size-selected soybean genomic Glycin... 52 0.028 1
(FI249972) CccaBb012-L20JR CccABb Cajanus cajan genomic clon... 52 0.028 1
(FI238074) CccaBb015-C24JR CccABb Cajanus cajan genomic clon... 52 0.028 1
(CT534458) A BAC library has been constructed from cultivar ... 52 0.028 1
(DY893357) CeleSEQ12672 Cunninghamella elegans pBluescript (... 52 0.028 1
(DY891252) CeleSEQ7949 Cunninghamella elegans pBluescript (E... 52 0.028 1
(DY580554) A011-H10 Acropora millepora postsettlement librar... 52 0.028 1
(AU273923) Hemicentrotus pulcherrimus mRNA, clone:001b02r_G0... 52 0.028 1
(EY343542) CAWZ12559.rev CAWZ Helobdella robusta Primary Lat... 52 0.028 1
(EY292366) CAWX10516.rev CAWX Helobdella robusta Primary Ear... 52 0.028 1
(CU855765) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 46 0.029 4
(AL928817) Zebrafish DNA sequence from clone CH211-244H4 in ... 34 0.029 8
(AL929352) Plasmodium falciparum strain 3D7, chromosome 5, s... 44 0.031 7
(AC116984) Dictyostelium discoideum chromosome 2 map 2567470... 48 0.031 3
(BX649602) Zebrafish DNA sequence from clone CH211-57E5 in l... 40 0.032 4
(AM465200) Vitis vinifera contig VV78X192407.23, whole genom... 46 0.033 3
(BX293559) Zebrafish DNA sequence from clone CH211-197E18. 46 0.033 5
(AL844506) Plasmodium falciparum chromosome 7. 46 0.034 4
(AC110374) Mus musculus BAC clone RP23-293P18 from 15, compl... 40 0.034 5
(CU929290) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 48 0.036 6
(CR848046) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 48 0.036 4
(AC210348) Solanum lycopersicum chromosome 7 clone C07HBa001... 36 0.043 6
(AC120473) Rattus norvegicus clone CH230-509E18, WORKING DRA... 42 0.043 3
(AY484460) Dictyostelium discoideum kinesin family member 3 ... 38 0.047 4
(CR932980) Zebrafish DNA sequence from clone DKEY-81L13 in l... 46 0.047 8
(AE014850) Plasmodium falciparum 3D7 chromosome 12, section ... 38 0.048 9
(BX248312) Zebrafish DNA sequence from clone CH211-139O4. 48 0.051 2
(BX511081) Zebrafish DNA sequence from clone DKEY-6B12 in li... 44 0.052 8
(AC171766) Atelerix albiventris clone LB4-510B9, WORKING DRA... 46 0.053 5
(AP009603) Solanum lycopersicum DNA, chromosome 8, clone: C0... 48 0.053 5
(AU284470) Dictyostelium discoideum gamete cDNA clone:FC-AY0... 48 0.054 2
(CT573448) Zebrafish DNA sequence *** SEQUENCING CANCELLED *... 46 0.057 7
(CR925753) Zebrafish DNA sequence from clone CH211-222B21 in... 48 0.058 7
(BX179913) Danio rerio genomic clone DKEY-180M3, genomic sur... 38 0.062 2
(AL929353) Plasmodium falciparum strain 3D7, chromosome 5, s... 46 0.063 6
(CR376851) Zebrafish DNA sequence from clone DKEY-48N5 in li... 50 0.066 2
(AC124306) Homo sapiens chromosome 15, clone RP11-275I4, com... 46 0.068 4
(CU672264) Zebrafish DNA sequence from clone CH1073-278H8. 40 0.069 5
(AC129930) Mus musculus clone RP23-135F12, LOW-PASS SEQUENCE... 40 0.072 2
(BX173816) Danio rerio genomic clone DKEY-179K19, genomic su... 38 0.073 2
(AC110624) Rattus norvegicus clone CH230-223G5, *** SEQUENCI... 48 0.073 2
(AC178472) Strongylocentrotus purpuratus clone R3-3035A8, WO... 46 0.073 4
(AC180942) Strongylocentrotus purpuratus clone R3-3061O09, W... 48 0.073 3
(BX936459) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 46 0.074 7
(CU138503) Zebrafish DNA sequence from clone CH211-114C17. 46 0.074 4
(ET743610) CHO_OF256xm18f1.ab1 CHO_OF Nicotiana tabacum geno... 42 0.075 2
(AP002991) Homo sapiens genomic DNA, chromosome 11 clone:CTC... 46 0.075 4
(CU928132) S.lycopersicum DNA sequence from clone SL_MboI-49... 38 0.075 7
(AE014837) Plasmodium falciparum 3D7 chromosome 11 section 2... 48 0.079 5
(BX005479) Zebrafish DNA sequence from clone DKEY-209E8 in l... 44 0.080 4
(AP009896) Lotus japonicus genomic DNA, clone: LjT41N19, TM2... 40 0.080 3
(AC013279) Homo sapiens chromosome 15 clone RP11-511H10, WOR... 46 0.080 4
(CU633948) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 34 0.083 5
(AC219144) Monodelphis domestica clone VMRC6-613B15, WORKING... 38 0.085 6
(AC005505) Plasmodium falciparum chromosome 12 clone PFYAC18... 38 0.085 9
(AC177095) Strongylocentrotus purpuratus clone R3-4012I16, W... 50 0.085 4
(DY886874) CeleSEQ2695 Cunninghamella elegans pBluescript (E... 48 0.085 2
(CU041264) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 48 0.086 4
(AC116977) Dictyostelium discoideum chromosome 2 map 5515173... 48 0.088 2
(BX539348) Zebrafish DNA sequence from clone DKEY-273G16 in ... 46 0.088 5
(AL049180) Plasmodium falciparum DNA *** SEQUENCING IN PROGR... 44 0.090 7
(AX344574) Sequence 25 from Patent WO0200932. 46 0.090 8
(CR931806) Zebrafish DNA sequence from clone DKEY-96F1 in li... 40 0.090 5
(CU468727) Zebrafish DNA sequence from clone CH73-272G3 in l... 36 0.092 7
(CT737151) Zebrafish DNA sequence from clone CH211-253B1 in ... 40 0.093 7
(BX470167) Zebrafish DNA sequence from clone DKEYP-86G2 in l... 46 0.093 5
(BX323800) Zebrafish DNA sequence from clone DKEYP-73A2 in l... 42 0.096 7
(AX348975) Sequence 433 from Patent WO0202807. 36 0.098 5
(AF404303) Spizellomyces punctatus mitochondrial chromosome ... 42 0.100 3
(BX537280) Zebrafish DNA sequence from clone DKEY-228C11 in ... 46 0.10 6
(BX537124) Zebrafish DNA sequence *** SEQUENCING CANCELLED *... 40 0.10 9
(CR855325) Zebrafish DNA sequence from clone DKEY-48K8 in li... 44 0.10 7
(FP236707) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 40 0.10 6
(CU856516) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 40 0.10 6
(AC117075) Dictyostelium discoideum chromosome 2 map 5201047... 44 0.10 3
(CR396595) Zebrafish DNA sequence from clone DKEY-238H7 in l... 48 0.10 4
(AL929354) Plasmodium falciparum strain 3D7, chromosome 5, s... 38 0.10 9
(BX936414) Zebrafish DNA sequence *** SEQUENCING CANCELLED *... 40 0.10 5
(CT027764) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 46 0.10 4
(CU469464) Candidatus Phytoplasma mali strain AT complete ch... 36 0.10 11
(CU993820) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 38 0.11 4
(BX537118) Zebrafish DNA sequence from clone CH211-202N8 in ... 44 0.11 5
(CR626887) Zebrafish DNA sequence from clone DKEY-46I14 in l... 40 0.11 5
(CU459027) Zebrafish DNA sequence from clone CH73-281K5 in l... 50 0.11 1
(CR932985) Zebrafish DNA sequence from clone DKEY-169L5 in l... 50 0.11 1
(CR376794) Zebrafish DNA sequence from clone CH211-188F17 in... 50 0.11 1
(CR352223) Zebrafish DNA sequence from clone CH211-124N19 in... 50 0.11 1
(BX679670) Zebrafish DNA sequence from clone CH211-286D16 in... 50 0.11 1
(BX470121) Zebrafish DNA sequence from clone DKEY-267G17 in ... 50 0.11 1
(BX296541) Zebrafish DNA sequence from clone CH211-278P9. 50 0.11 1
(AY635595) Bufo boreas clone BBR201 microsatellite sequence. 50 0.11 1
(AL844152) Zebrafish DNA sequence from clone DKEY-37L7 in li... 50 0.11 1
(BV211768) BARC27 Wheat var Chinese Spring Genomic DNA Triti... 50 0.11 1
(AC132589) Mus musculus BAC clone RP24-258M24 from 1, comple... 50 0.11 1
(AC122287) Mus musculus BAC clone RP23-253A15 from 1, comple... 50 0.11 1
(AC102377) Mus musculus chromosome 18, clone RP23-416I22, co... 50 0.11 1
(CR382126) Kluyveromyces lactis strain NRRL Y-1140 chromosom... 50 0.11 1
(AP009268) Solanum lycopersicum genomic DNA, chromosome 8, c... 50 0.11 1
(AM450140) Vitis vinifera contig VV78X158759.5, whole genome... 50 0.11 1
(AL033391) C.albicans cosmid Ca20C1. 50 0.11 1
(EA265005) Sequence 19 from patent US 7241613. 50 0.11 1
(AC116963) Dictyostelium discoideum chromosome 2 map 4657875... 50 0.11 1
(AC087327) Trypanosoma brucei chromosome 4 clone RPCI93-3I12... 50 0.11 1
(FP017252) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 50 0.11 1
(CU928545) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 50 0.11 1
(CU862078) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 50 0.11 1
(CU855862) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 50 0.11 1
(CU463034) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 50 0.11 1
(CU313313) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 50 0.11 1
(CT971503) Zebrafish DNA sequence *** SEQUENCING CANCELLED *... 50 0.11 1
(CR457448) Zebrafish DNA sequence *** SEQUENCING CANCELLED *... 50 0.11 1
(CR388375) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 50 0.11 1
(AC200944) Strongylocentrotus purpuratus clone R3-1037D10, W... 50 0.11 1
(AC184544) Strongylocentrotus purpuratus clone R3-10M4, WORK... 50 0.11 1
(AC181133) Strongylocentrotus purpuratus clone R3-3037E15, W... 50 0.11 1
(AC178475) Strongylocentrotus purpuratus clone R3-3039B24, W... 50 0.11 1
(AC178016) Strongylocentrotus purpuratus clone R3-1117G22, W... 50 0.11 1
(AC177772) Strongylocentrotus purpuratus clone R3-1004M23, W... 50 0.11 1
(AC177634) Strongylocentrotus purpuratus clone R3-1020G3, WO... 50 0.11 1
(AC177545) Strongylocentrotus purpuratus clone R3-1026N2, WO... 50 0.11 1
(AC176734) Strongylocentrotus purpuratus clone R3-3096O20, W... 50 0.11 1
(AZ863789) 2M0173M02F Mouse 10kb plasmid UUGC1M library Mus ... 50 0.11 1
(AZ128657) OSJNBb0099H01r CUGI Rice BAC Library (EcoRI) Oryz... 50 0.11 1
(FI262698) CccaBb041-L13JR CccABb Cajanus cajan genomic clon... 50 0.11 1
(CT419388) Sus scrofa genomic clone CH242-484O19, genomic su... 50 0.11 1
(BX125569) Danio rerio genomic clone DKEY-69B16, genomic sur... 50 0.11 1
(DT949190) CFW102-A04.x1d-t SHGC-CFW Gasterosteus aculeatus ... 50 0.11 1
(DR073148) qs66d04.g1 Ginkgo female leaf (NYBG) Ginkgo bilob... 50 0.11 1
(AU087262) Plasmodium falciparum 3D7 cDNA clone from Sugano ... 50 0.11 1
(C91219) Dictyostelium discoideum slug cDNA, clone SSJ833. 50 0.11 1
(C84252) Dictyostelium discoideum slug cDNA, clone SSB395. 50 0.11 1
(BY879758) Cryptomeria japonica cDNA clone: CMFL006_C21, 5'e... 50 0.11 1
(BY879242) Cryptomeria japonica cDNA clone: CMFL004_M10, 5'e... 50 0.11 1
(BM171595) EST574118 PyBS Plasmodium yoelii yoelii cDNA clon... 50 0.11 1
(BM167639) EST570162 PyBS Plasmodium yoelii yoelii cDNA clon... 50 0.11 1
(BM159755) EST562278 PyBS Plasmodium yoelii yoelii cDNA clon... 50 0.11 1
(BJ397318) Dictyostelium discoideum cDNA clone:dds45j20, 5' ... 50 0.11 1
(BJ396134) Dictyostelium discoideum cDNA clone:dds41b13, 5' ... 50 0.11 1
(BJ395602) Dictyostelium discoideum cDNA clone:dds39b15, 5' ... 50 0.11 1
(BJ391822) Dictyostelium discoideum cDNA clone:dds25f12, 5' ... 50 0.11 1
(BJ339476) Dictyostelium discoideum cDNA clone:dda65a18, 5' ... 50 0.11 1
(FE745004) CAYC2725.b1 CAYC Petrolisthes cinctipes heart, ne... 50 0.11 1
(EY438090) CBAY2256.fwd CBAY Tubifex tubifex Embryos and juv... 50 0.11 1
(EY438089) CBAY2256.rev CBAY Tubifex tubifex Embryos and juv... 50 0.11 1
(AC116305) Dictyostelium discoideum chromosome 2 map 1005175... 46 0.12 2
(AL121960) Human DNA sequence *** SEQUENCING CANCELLED *** f... 48 0.12 5
(BX248239) Zebrafish DNA sequence from clone CH211-213I9 in ... 38 0.12 4
(AC097459) Homo sapiens BAC clone RP11-13F20 from 4, complet... 38 0.12 7
(BX649409) Zebrafish DNA sequence *** SEQUENCING CANCELLED *... 44 0.12 5
(FP067436) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 40 0.12 6
(CR381644) Zebrafish DNA sequence from clone CH211-80A15 in ... 38 0.12 6
(FP103058) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 42 0.12 4
(AC115605) Dictyostelium discoideum chromosome 2 map 5817431... 46 0.13 4
(BX649258) Zebrafish DNA sequence from clone CH211-203F4 in ... 46 0.13 5
(CR936260) Zebrafish DNA sequence from clone DKEY-16H22 in l... 48 0.14 5
(AC174265) Strongylocentrotus purpuratus clone R3-3001E13, W... 34 0.14 7
(AC202054) Pan troglodytes chromosome 19 clone CH251-637K12,... 48 0.14 4
(AP001913) Homo sapiens genomic DNA, chromosome 18q22 clone:... 38 0.15 9
(AC197669) Zea mays chromosome unknown clone ZMMBBb-600H24; ... 40 0.15 4
(AC115592) Dictyostelium discoideum chromosome 2 map 1-12595... 42 0.15 2
(CT025749) Zebrafish DNA sequence from clone DKEY-249P9 in l... 32 0.15 10
(AC004795) Homo sapiens chromosome 4, *** SEQUENCING IN PROG... 44 0.15 5
(AC117070) Dictyostelium discoideum chromosome 2 map 2097701... 46 0.16 2
(BX927402) Zebrafish DNA sequence from clone CH211-262G12 in... 40 0.16 5
(AC180931) Strongylocentrotus purpuratus clone R3-3061I14, W... 46 0.17 3
(BX323588) Zebrafish DNA sequence from clone DKEY-225F23 in ... 46 0.17 6
(CR382335) Zebrafish DNA sequence from clone DKEY-56I16 in l... 40 0.17 5
(BX927165) Zebrafish DNA sequence from clone DKEYP-120H9 in ... 46 0.17 7
(CR847562) Zebrafish DNA sequence from clone DKEY-151M24 in ... 40 0.17 4
(CR385078) Zebrafish DNA sequence from clone DKEYP-104F11 in... 36 0.17 9
(CE320856) tigr-gss-dog-17000360481726 Dog Library Canis lup... 36 0.18 3
(BX470222) Zebrafish DNA sequence from clone DKEYP-120F10 in... 48 0.18 3
(CR391930) Zebrafish DNA sequence from clone CH211-154B16 in... 40 0.18 7
(AC171130) Helobdella robusta clone CH306-1A12, complete seq... 42 0.18 7
(BX572080) Zebrafish DNA sequence from clone DKEY-22N17 in l... 36 0.18 7
(AC183462) Atelerix albiventris clone LB4-524C13, WORKING DR... 46 0.18 5
(CT583721) Zebrafish DNA sequence from clone DKEY-193G10 in ... 46 0.18 5
(AM458302) Vitis vinifera contig VV78X007560.2, whole genome... 38 0.19 2
(CU683869) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 46 0.19 5
(BX119926) Zebrafish DNA sequence from clone CH211-42C8 in l... 48 0.19 3
(AC139368) Mus musculus chromosome 1, clone RP24-534C15, com... 44 0.19 2
(AC027670) Homo sapiens chromosome 10 clone RP11-176H12, com... 40 0.19 6
(BX072569) Zebrafish DNA sequence from clone CH211-184B9 in ... 40 0.19 6
(AM443576) Vitis vinifera contig VV78X133447.2, whole genome... 38 0.20 3
(CT010464) M.truncatula DNA sequence from clone MTH2-95O22 o... 40 0.20 5
(BX950169) Zebrafish DNA sequence from clone CH211-203N19 in... 46 0.20 4
(AC019040) Homo sapiens chromosome 2 clone RP11-1D24, WORKIN... 36 0.20 6
(AL929351) Plasmodium falciparum strain 3D7, chromosome 5, s... 46 0.21 5
(AC004157) Plasmodium falciparum chromosome 12 clone PFYAC29... 44 0.21 5
(BX510308) Zebrafish DNA sequence from clone DKEY-108H8 in l... 46 0.21 7
(CU179680) Mycoplasma agalactiae PG2 chromosome, complete se... 32 0.21 15
(CR735110) Zebrafish DNA sequence from clone CH211-176A19 in... 46 0.21 5
(AY211984) Dictyostelium discoideum putative cyclic nucleoti... 48 0.22 2
(FP015851) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 46 0.22 2
(AC055121) Homo sapiens chromosome 5 clone RP11-481H5, WORKI... 42 0.22 5
(AC171499) Medicago truncatula chromosome 8 clone mth2-157b1... 34 0.22 8
(CT990566) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 44 0.22 7
(AL741791) Danio rerio genomic clone DKEY-8O18, genomic surv... 42 0.22 2
(BX005462) Zebrafish DNA sequence from clone CH211-158D24 in... 48 0.23 5
(M38703) Dictyostelium discoideum protein kinase (GPK2) gene... 34 0.24 3
(CU468733) Zebrafish DNA sequence from clone DKEY-116L11 in ... 46 0.25 2
(BJ434745) Dictyostelium discoideum cDNA clone:ddv24h22, 3' ... 38 0.25 2
(AC132382) Mus musculus BAC clone RP23-425E9 from 8, complet... 34 0.25 2
(AC164052) Bos taurus clone CH240-149I17, WORKING DRAFT SEQU... 38 0.25 2
(BX000690) Zebrafish DNA sequence from clone CH211-1C6. 34 0.25 2
(AM481481) Vitis vinifera contig VV78X209716.2, whole genome... 46 0.25 2
(BX510656) Zebrafish DNA sequence from clone CH211-132N7 in ... 34 0.25 2
(CU468447) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 34 0.25 2
(AC184657) Strongylocentrotus purpuratus clone R3-4014M9, WO... 34 0.26 2
(AC177410) Strongylocentrotus purpuratus clone R3-53O7, WORK... 38 0.26 2
(CU024870) Zebrafish DNA sequence from clone CH211-193F12. 44 0.26 6
(CR855382) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 42 0.26 8
(BX218736) Danio rerio genomic clone DKEY-51A3, genomic surv... 42 0.26 2
(AC176152) Strongylocentrotus purpuratus clone R3-2I21, WORK... 46 0.26 4
(CR855220) Zebrafish DNA sequence from clone DKEY-100J1 in l... 48 0.26 6
(DR079926) RTFEPL1_18_E11.g1_A029 Roots plus added iron Pinu... 44 0.26 2
(FH580905) CHO_OF4674xk09r1.ab1 CHO_OF4 Nicotiana tabacum ge... 44 0.26 2
(DR016572) STRS1_10_H10.g1_A034 Shoot tip pitch canker susce... 44 0.26 2
(CT538228) A BAC library has been constructed from cultivar ... 46 0.26 2
(AC152751) Medicago truncatula clone mth2-18n7, complete seq... 42 0.26 6
(AC176095) Strongylocentrotus purpuratus clone R3-24D18, WOR... 34 0.26 2
(FC833010) CBHI4825.fwd CBHI Metridium senile tentacle Metri... 46 0.27 2
(CR812481) Zebrafish DNA sequence from clone DKEY-225D17 in ... 40 0.27 8
(CU672269) Zebrafish DNA sequence *** SEQUENCING CANCELLED *... 44 0.27 2
(AC180221) Strongylocentrotus purpuratus clone R3-3008A8, WO... 40 0.27 5
(BK006336) TPA_exp: Drosophila ananassae mitochondrion, comp... 34 0.27 5
(CU463233) Zebrafish DNA sequence from clone CH73-364M4. 46 0.28 3
(AL583742) Human chromosome 14 DNA sequence BAC R-318A9 of l... 40 0.28 4
(AM449701) Vitis vinifera contig VV78X107639.12, whole genom... 38 0.29 2
(AE001396) Plasmodium falciparum 3D7 chromosome 2 section 33... 46 0.29 2
(AY159038) Dictyostelium discoideum LvsB (lvsB) gene, comple... 46 0.29 2
(AC225502) Medicago truncatula clone mth2-58c24, WORKING DRA... 40 0.29 8
(AC217477) Neofelis nebulosa clone CH87-280D5, WORKING DRAFT... 36 0.29 8
(BX890565) Zebrafish DNA sequence from clone CH211-250G22. 36 0.29 6
(CU672267) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 38 0.30 3
(AC091075) Homo sapiens chromosome 8 clone RP11-680G2 map 8,... 38 0.31 7
(DY886920) CeleSEQ2752 Cunninghamella elegans pBluescript (E... 46 0.31 2
(CU466288) Zebrafish DNA sequence from clone CH73-314K14 in ... 42 0.31 5
(DD010735) Diagnosis of known genetic Parameters within the ... 44 0.31 10
(CT544833) A BAC library has been constructed from cultivar ... 40 0.31 2
(AU073035) Dictyostelium discoideum slug cDNA, clone SSF759. 42 0.31 2
(AC174553) Strongylocentrotus purpuratus clone R3-15I10, WOR... 44 0.31 6
(AL772373) Zebrafish DNA sequence from clone CH211-143A22 in... 46 0.32 4
(FE521699) li0678759 Radiata pine mature earlywood cDNA libr... 44 0.32 2
(AL929495) Zebrafish DNA sequence from clone CH211-136M16 in... 44 0.32 7
(CT030153) Zebrafish DNA sequence from clone DKEYP-80E12 in ... 46 0.32 7
(CT573208) Zebrafish DNA sequence from clone CH73-52H17 in l... 44 0.32 4
(CP000087) Rickettsia bellii RML369-C, complete genome. 34 0.32 15
(BX927228) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 42 0.33 5
(EY384478) CAXA5169.fwd CAXA Helobdella robusta Subtracted L... 36 0.33 2
(EY365495) CAXA10218.rev CAXA Helobdella robusta Subtracted ... 36 0.33 2
(EY347743) CAWZ1608.rev CAWZ Helobdella robusta Primary Late... 36 0.33 2
(BX511013) Zebrafish DNA sequence from clone DKEY-221I2 in l... 40 0.33 8
(EY384477) CAXA5169.rev CAXA Helobdella robusta Subtracted L... 36 0.33 2
(CU468918) Zebrafish DNA sequence from clone CH211-41B11 in ... 48 0.33 2
(EI459508) PV_GBa0062H02.f PV_GBa Phaseolus vulgaris genomic... 36 0.33 2
(EI430148) PV_GBa0021M16.f PV_GBa Phaseolus vulgaris genomic... 36 0.34 2
(DC219250) Plasmodium berghei strain ANKA cDNA clone:MZ00074... 34 0.34 3
(CR847502) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 46 0.34 5
(BX927069) Zebrafish DNA sequence from clone DKEY-24C22 in l... 36 0.34 8
(AC181915) Strongylocentrotus purpuratus clone R3-1011A10, W... 42 0.35 3
(CT027830) Zebrafish DNA sequence from clone CH211-160K22 in... 36 0.35 7
(CR361562) Zebrafish DNA sequence from clone CH211-281H24 in... 40 0.35 7
(BX294123) Zebrafish DNA sequence from clone DKEYP-16G7 in l... 34 0.35 6
(BX649325) Zebrafish DNA sequence from clone DKEY-81F9 in li... 46 0.36 6
(CT990569) Zebrafish DNA sequence from clone DKEY-33H4 in li... 38 0.36 8
(BX324148) Zebrafish DNA sequence from clone RP71-17G11 in l... 40 0.36 6
(BX004781) Zebrafish DNA sequence from clone CH211-149G8 in ... 40 0.37 6
(AC180445) Strongylocentrotus purpuratus clone R3-3102N02, W... 40 0.37 6
(AM475914) Vitis vinifera contig VV78X063046.2, whole genome... 36 0.37 2
(AL935034) Zebrafish DNA sequence from clone CH211-160A3 in ... 46 0.38 6
(AP010322) Lotus japonicus genomic DNA, chromosome 1, clone:... 40 0.38 2
(BX548069) Zebrafish DNA sequence from clone CH211-238G23 in... 42 0.38 5
(CR376772) Zebrafish DNA sequence from clone CH211-244C20 in... 34 0.38 8
(BX546460) Zebrafish DNA sequence from clone RP71-84C10. 40 0.39 5
(CU302223) Zebrafish DNA sequence from clone CH73-58A17 in l... 46 0.39 4
(FP236172) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 46 0.39 4
(FP102164) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 42 0.40 4
(CR628383) Zebrafish DNA sequence from clone DKEY-84L8 in li... 48 0.40 3
(AE014841) Plasmodium falciparum 3D7 chromosome 11 section 6... 46 0.40 8
(BX927414) Zebrafish DNA sequence from clone DKEYP-5A5 in li... 46 0.40 4
(AE014851) Plasmodium falciparum 3D7 chromosome 12, section ... 46 0.41 9
(BX666062) Zebrafish DNA sequence from clone DKEY-99O18 in l... 40 0.41 6
(AL606520) Mouse DNA sequence from clone RP23-280G18 on chro... 38 0.41 3
(CU896644) Zebrafish DNA sequence from clone CH73-43D13 in l... 36 0.42 3
(BX908384) Zebrafish DNA sequence from clone DKEY-38K3 in li... 36 0.43 7
(AC161864) Medicago truncatula clone mth2-69d21, complete se... 44 0.44 6
(AM462952) Vitis vinifera contig VV79X001842.3, whole genome... 36 0.44 5
(FP015828) Zebrafish DNA sequence from clone CH73-179G5 in l... 48 0.44 1
(CU905505) Zebrafish DNA sequence from clone ZFOS-405G10 in ... 48 0.44 1
(CU855690) Zebrafish DNA sequence from clone CH73-211K12 in ... 48 0.44 1
(CU694368) Zebrafish DNA sequence from clone CH73-252I11 in ... 48 0.44 1
(CU634006) Zebrafish DNA sequence from clone CH1073-137O9 in... 48 0.44 1
(CU611050) Zebrafish DNA sequence from clone CH1073-390K14 i... 48 0.44 1
(CU571062) Zebrafish DNA sequence from clone CH211-187D7 in ... 48 0.44 1
(CU570788) Zebrafish DNA sequence from clone CH73-299H12 in ... 48 0.44 1
(CU467042) Zebrafish DNA sequence from clone CH73-49C19 in l... 48 0.44 1
(CU464205) Zebrafish DNA sequence from clone DKEY-111K8 in l... 48 0.44 1
(CU459164) Zebrafish DNA sequence from clone CH73-377J22 in ... 48 0.44 1
(CU326366) Zebrafish DNA sequence from clone DKEYP-117G7 in ... 48 0.44 1
(CU210942) Zebrafish DNA sequence from clone CH73-128K20 in ... 48 0.44 1
(CU179730) Zebrafish DNA sequence from clone CH211-186I18 in... 48 0.44 1
(CU104743) Zebrafish DNA sequence from clone CH73-310I18 in ... 48 0.44 1
(CT737139) Zebrafish DNA sequence from clone DKEYP-7C9 in li... 48 0.44 1
(CT573393) Zebrafish DNA sequence from clone DKEY-48P11 in l... 48 0.44 1
(CT573157) Zebrafish DNA sequence from clone CH73-1M18 in li... 48 0.44 1
(CT025596) Zebrafish DNA sequence from clone CH211-191J19 in... 48 0.44 1
(CR954963) Zebrafish DNA sequence from clone DKEY-77J9 in li... 48 0.44 1
(CR936437) Zebrafish DNA sequence from clone CH211-197I23 in... 48 0.44 1
(CR936285) Zebrafish DNA sequence from clone CH73-35G18 in l... 48 0.44 1
(CR932979) Zebrafish DNA sequence from clone CH211-80M8 in l... 48 0.44 1
(CR931813) Zebrafish DNA sequence from clone DKEY-242K1 in l... 48 0.44 1
(CR854923) Zebrafish DNA sequence from clone CH211-170J16 in... 48 0.44 1
(CR854911) Zebrafish DNA sequence from clone DKEY-46O18 in l... 48 0.44 1
(CR848753) Zebrafish DNA sequence from clone DKEY-46J3 in li... 48 0.44 1
(CR848021) Zebrafish DNA sequence from clone DKEY-219E21 in ... 48 0.44 1
(CR847800) Zebrafish DNA sequence from clone DKEY-182M5 in l... 48 0.44 1
(CR847799) Zebrafish DNA sequence from clone DKEY-117P4 in l... 48 0.44 1
(CR762395) Zebrafish DNA sequence from clone CH211-170P16 in... 48 0.44 1
(CR759424) Zebrafish DNA sequence from clone DKEY-100G2 in l... 48 0.44 1
(CR749163) Zebrafish DNA sequence from clone CH211-216B21 in... 48 0.44 1
(CR678304) Zebrafish DNA sequence from clone DKEY-254E8 in l... 48 0.44 1
(CR626884) Zebrafish DNA sequence from clone DKEY-83H2 in li... 48 0.44 1
(CR548630) Zebrafish DNA sequence from clone CH211-232B12 in... 48 0.44 1
(CR545479) Zebrafish DNA sequence from clone CH211-219M24 in... 48 0.44 1
(CR450781) Zebrafish DNA sequence from clone DKEY-20O6 in li... 48 0.44 1
(CR407586) Zebrafish DNA sequence from clone CH211-283G6 in ... 48 0.44 1
(CR407583) Zebrafish DNA sequence from clone DKEY-151C12 in ... 48 0.44 1
(CR396590) Zebrafish DNA sequence from clone CH211-238P8 in ... 48 0.44 1
(CR392021) Zebrafish DNA sequence from clone CH211-126H20 in... 48 0.44 1
(CR391978) Zebrafish DNA sequence from clone DKEY-252L8 in l... 48 0.44 1
(CR388161) Zebrafish DNA sequence from clone CH211-288B17 in... 48 0.44 1
(CR388051) Zebrafish DNA sequence from clone CH211-239B6 in ... 48 0.44 1
(CR385042) Zebrafish DNA sequence from clone DKEYP-87A12 in ... 48 0.44 1
(CR381694) Zebrafish DNA sequence from clone CH211-55I2 in l... 48 0.44 1
(CR381594) Zebrafish DNA sequence from clone DKEY-12H3 in li... 48 0.44 1
(CR376824) Zebrafish DNA sequence from clone DKEY-9P24 in li... 48 0.44 1
(CR356240) Zebrafish DNA sequence from clone CH211-226E7 in ... 48 0.44 1
(CR352297) Zebrafish DNA sequence from clone CH211-165L15 in... 48 0.44 1
(CR352239) Zebrafish DNA sequence from clone DKEY-283B10 in ... 48 0.44 1
(CR293531) Zebrafish DNA sequence from clone DKEY-125H23 in ... 48 0.44 1
(BX957236) Zebrafish DNA sequence from clone DKEY-178O3 in l... 48 0.44 1
(BX950207) Zebrafish DNA sequence from clone CH211-10H13 in ... 48 0.44 1
(BX950177) Zebrafish DNA sequence from clone CH211-101D21 in... 48 0.44 1
(BX927392) Zebrafish DNA sequence from clone DKEY-17E11 in l... 48 0.44 1
(BX927240) Zebrafish DNA sequence from clone DKEY-16N13 in l... 48 0.44 1
(BX784036) Zebrafish DNA sequence from clone CH211-223P14 in... 48 0.44 1
(BX649387) Zebrafish DNA sequence from clone CH211-198I20 in... 48 0.44 1
(BX571833) Zebrafish DNA sequence from clone DKEY-287J13. 48 0.44 1
(BX571773) Zebrafish DNA sequence from clone DKEY-174K1 in l... 48 0.44 1
(BX548028) Zebrafish DNA sequence from clone CH211-260H24 in... 48 0.44 1
(BX539313) Zebrafish DNA sequence from clone DKEYP-84F3 in l... 48 0.44 1
(BX530721) Zebrafish DNA sequence from clone CH211-195B13 in... 48 0.44 1
(BX530407) Zebrafish DNA sequence from clone DKEY-83M22 in l... 48 0.44 1
(BX511190) Zebrafish DNA sequence from clone RP71-80D18 in l... 48 0.44 1
(BX510959) Zebrafish DNA sequence from clone CH211-51A19 in ... 48 0.44 1
(BX510939) Zebrafish DNA sequence from clone CH211-78C9 in l... 48 0.44 1
(BX465192) Zebrafish DNA sequence from clone CH211-202P4 in ... 48 0.44 1
(BX323031) Zebrafish DNA sequence from clone DKEYP-7B3 in li... 48 0.44 1
(BX321882) Zebrafish DNA sequence from clone DKEYP-30F1 in l... 48 0.44 1

>(BJ399881) Dictyostelium discoideum cDNA clone:dds7j24, 3' end,
single read.
Length = 673

Score = 1017 bits (513), Expect(2) = 0.0
Identities = 513/513 (100%)
Strand = Plus / Minus


Query: 161 ggtggtattgatcttataatgaaagcaaatgtttgtggattttcaggtgttatagcagca 220
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 513 ggtggtattgatcttataatgaaagcaaatgtttgtggattttcaggtgttatagcagca 454


Query: 221 ttttcagttgcattgaaacaattaataacagaacaagaatttaatttctttttaataaag 280
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 453 ttttcagttgcattgaaacaattaataacagaacaagaatttaatttctttttaataaag 394


Query: 281 attagagcaaaatggataccatttatattgattttatttagagtgattgtattttcattc 340
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 393 attagagcaaaatggataccatttatattgattttatttagagtgattgtattttcattc 334


Query: 341 attggatttcaagacagatcattcacattggtcatttatggtgtatttatagcttggatt 400
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 333 attggatttcaagacagatcattcacattggtcatttatggtgtatttatagcttggatt 274


Query: 401 tatttaagattttatcaagttaaatctggtgtaaaaggtgatcttaatgaatctttttca 460
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 273 tatttaagattttatcaagttaaatctggtgtaaaaggtgatcttaatgaatctttttca 214


Query: 461 ttttatacatttttccctgacccagtacaagcaccaattaaagttatttcaaatatagta 520
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 213 ttttatacatttttccctgacccagtacaagcaccaattaaagttatttcaaatatagta 154


Query: 521 tttaaaattctttgtaaattatcaatatgttcatcatcaagattttcaaatcaatcaatt 580
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 153 tttaaaattctttgtaaattatcaatatgttcatcatcaagattttcaaatcaatcaatt 94


Query: 581 ttaccaacaacaaataataataatattaataacaatgatgatagctataatgtagctgat 640
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 93 ttaccaacaacaaataataataatattaataacaatgatgatagctataatgtagctgat 34


Query: 641 atggagagaagaagagcattagctgttaaagct 673
|||||||||||||||||||||||||||||||||
Sbjct: 33 atggagagaagaagagcattagctgttaaagct 1

Score = 204 bits (103), Expect(2) = 0.0
Identities = 103/103 (100%)
Strand = Plus / Minus


Query: 1 tattattagtggaattttcaatatagtagcattattatttattgggaaatatttagaacc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 673 tattattagtggaattttcaatatagtagcattattatttattgggaaatatttagaacc 614


Query: 61 aatatggggttcaagagaatttataaagtttatattagtagta 103
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 613 aatatggggttcaagagaatttataaagtttatattagtagta 571

Lambda K H
1.37 0.711 1.31

Matrix: blastn matrix:1 -3
Number of Sequences: 102105510
Number of Hits to DB: 1,028,240,979
Number of extensions: 72377858
Number of successful extensions: 9921710
Number of sequences better than 10.0: 6346
Length of query: 683
Length of database: 101,790,757,118
Length adjustment: 24
Effective length of query: 659
Effective length of database: 99,340,224,878
Effective search space: 65465208194602
Effective search space used: 65465208194602
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)

protein update 2009. 7.19
Homology vs Protein
Query= Contig-U02610-1 (Contig-U02610-1Q) /CSM_Contig/Contig-U02610-1Q.Seq.d
(683 letters)

Database: nrp_B
3,236,559 sequences; 1,051,180,864 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value

EF676930_1(EF676930|pid:none) Picea sitchensis clone WS02758_C18... 119 8e-26
AP008209_1504(AP008209|pid:none) Oryza sativa (japonica cultivar... 117 2e-25
BT055762_1(BT055762|pid:none) Zea mays full-length cDNA clone ZM... 116 7e-25
BT038763_1(BT038763|pid:none) Zea mays full-length cDNA clone ZM... 115 2e-24
AC013483_29(AC013483|pid:none) Arabidopsis thaliana chromosome I... 114 4e-24
AY085112_1(AY085112|pid:none) Arabidopsis thaliana clone 13017 m... 114 4e-24
BT076328_1(BT076328|pid:none) Caligus rogercresseyi clone crog-e... 112 1e-23
EF146635_1(EF146635|pid:none) Populus trichocarpa clone WS01211_... 110 3e-23
CR854998_3(CR854998|pid:none) Oryza sativa (indica cultivar-grou... 107 4e-22
AL662935_3(AL662935|pid:none) Oryza sativa genomic DNA, chromoso... 107 4e-22
AK061755_1(AK061755|pid:none) Oryza sativa Japonica Group cDNA c... 107 4e-22
AM270115_41(AM270115|pid:none) Aspergillus niger contig An06c009... 105 1e-21
BT037740_1(BT037740|pid:none) Zea mays full-length cDNA clone ZM... 102 8e-21
AE017344_601(AE017344|pid:none) Cryptococcus neoformans var. neo... 96 1e-18
BC152589_1(BC152589|pid:none) Danio rerio transmembrane protein ... 92 2e-17
BC160707_1(BC160707|pid:none) Xenopus laevis hypothetical protei... 92 2e-17
BC109435_1(BC109435|pid:none) Danio rerio transmembrane protein ... 92 2e-17
FN357295_55(FN357295|pid:none) Schistosoma mansoni genome sequen... 91 4e-17
AK314166_1(AK314166|pid:none) Homo sapiens cDNA, FLJ94877, highl... 89 1e-16
AK154202_1(AK154202|pid:none) Mus musculus NOD-derived CD11c +ve... 89 2e-16
(Q9WUH1) RecName: Full=Transmembrane protein 115; AltName: Full=... 89 2e-16
AB435542_11(AB435542|pid:none) Pholiota nameko mmsd, lmwppp, hp1... 87 4e-16
AE014134_1148(AE014134|pid:none) Drosophila melanogaster chromos... 86 1e-15
AL669993_2(AL669993|pid:none) Neurospora crassa DNA linkage grou... 83 7e-15
CU638743_579(CU638743|pid:none) Podospora anserina genomic DNA c... 80 4e-14
CR382130_584(CR382130|pid:none) Yarrowia lipolytica strain CLIB1... 80 7e-14
CR382137_712(CR382137|pid:none) Debaryomyces hansenii strain CBS... 74 4e-12
FN392320_1202(FN392320|pid:none) Pichia pastoris GS115 chromosom... 65 2e-09
CP000588_12(CP000588|pid:none) Ostreococcus lucimarinus CCE9901 ... 64 4e-09
FN318333_1(FN318333|pid:none) Schistosoma japonicum isolate Anhu... 61 3e-08
FN314132_1(FN314132|pid:none) Schistosoma japonicum isolate Anhu... 61 4e-08
FM992688_1154(FM992688|pid:none) Candida dubliniensis CD36 chrom... 60 8e-08
AC002481_1(AC002481|pid:none) Human cosmid clone LUCA12 from 3p2... 59 2e-07
AY810337_1(AY810337|pid:none) Schistosoma japonicum SJCHGC05040 ... 57 4e-07
CU928174_289(CU928174|pid:none) Zygosaccharomyces rouxii strain ... 56 9e-07
CP001325_774(CP001325|pid:none) Micromonas sp. RCC299 chromosome... 52 1e-05
C88854(C88854)protein F11A10.3 [imported] - Caenorhabditis elegans 52 2e-05
T20737(T20737) hypothetical protein F11A10.6 - Caenorhabditis el... 52 2e-05
CU928167_381(CU928167|pid:none) Kluyveromyces thermotolerans str... 50 6e-05
BC009099_1(BC009099|pid:none) Mus musculus transmembrane protein... 50 8e-05
FM992688_221(FM992688|pid:none) Candida dubliniensis CD36 chromo... 44 0.003
AE010300_1218(AE010300|pid:none) Leptospira interrogans serovar ... 38 0.33
(Q8ILR9) RecName: Full=LRR domain-containing protein PF14_0175; ... 36 1.2
AM039952_2901(AM039952|pid:none) Xanthomonas campestris pv. vesi... 34 3.6
AP008229_3107(AP008229|pid:none) Xanthomonas oryzae pv. oryzae M... 34 4.7
CP000975_1405(CP000975|pid:none) Methylacidiphilum infernorum V4... 34 4.7
CP000076_3762(CP000076|pid:none) Pseudomonas fluorescens Pf-5, c... 33 6.1
DQ889747_5(DQ889747|pid:none) Streptococcus salivarius strain 9 ... 33 6.1
CP000777_956(CP000777|pid:none) Leptospira biflexa serovar Patoc... 33 6.1
CP000934_665(CP000934|pid:none) Cellvibrio japonicus Ueda107, co... 33 8.0
EF127281_1(EF127281|pid:none) Macrothele calpeiana voucher HU2 1... 33 8.0
BX950851_994(BX950851|pid:none) Erwinia carotovora subsp. atrose... 33 8.0

>EF676930_1(EF676930|pid:none) Picea sitchensis clone WS02758_C18
unknown mRNA.
Length = 318

Score = 119 bits (298), Expect = 8e-26
Identities = 68/189 (35%), Positives = 104/189 (55%), Gaps = 3/189 (1%)
Frame = +2

Query: 14 IFNIVALLFIGKYLEPIWGSREFIKFILVVIXXXXXXXXXXXXXXXXXXGGIDLIMKANV 193
I +I+ LLF GK LEPIWGSREF+KFI ++ ++ + +
Sbjct: 78 ILSIIGLLFSGKLLEPIWGSREFLKFI-AIVNIVTSISVFITTIFLYYITWKEIFLYTPL 136

Query: 194 CGFSGVIAAFSVALKQLITEQEFN-FFLIKIRAKWIPFILILFRVIVFSFIGFQDRSFTL 370
GF GV++ F V +KQ++ +QE F++K+RAKW+P +L+L +IV
Sbjct: 137 SGFHGVLSGFLVGVKQIMPDQEITILFVLKLRAKWLPSLLVLVSIIVSILATDSTSYLPF 196

Query: 371 VIYGVFIAWIYLRFYQVK--SGVKGDLNESFSFYTFFPDPVQAPIKVISNIVFKILCKLS 544
+I+G + +W+YLRF Q K + +KGD ++ F+F TFFP+ + + I+ I KI C S
Sbjct: 197 IIFGTYSSWLYLRFLQRKPETNLKGDPSDEFAFSTFFPEFMGPIVDAIAVICEKICCGGS 256

Query: 545 ICSSSRFSN 571
SS N
Sbjct: 257 QISSEEEGN 265

Lambda K H
0.318 0.134 0.401

Gapped
Lambda K H
0.267 0.0410 0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3236559
Number of Hits to DB: 860,783,810
Number of extensions: 15316733
Number of successful extensions: 40121
Number of sequences better than 10.0: 52
Number of HSP's gapped: 40008
Number of HSP's successfully gapped: 54
Length of query: 227
Length of database: 1,051,180,864
Length adjustment: 124
Effective length of query: 103
Effective length of database: 649,847,548
Effective search space: 66934297444
Effective search space used: 66934297444
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 31 (16.5 bits)

PSORT

psg: 0.97 gvh: 0.66 alm: 0.21 top: 0.60 tms: 0.33 mit: 0.23 mip: 0.00
nuc: 0.00 erl: 0.00 erm: 0.20 pox: 0.00 px2: 0.00 vac: 0.00 rnp: 0.00
act: 0.00 caa: 0.00 yqr: 0.00 tyr: 0.00 leu: 0.00 gpi: 0.00 myr: 0.00
dna: 0.00 rib: 0.00 bac: 0.00 m1a: 0.00 m1b: 0.00 m2 : 0.00 mNt: 0.00
m3a: 0.00 m3b: 1.00 m_ : 0.00

32.0 %: endoplasmic reticulum
28.0 %: plasma membrane
12.0 %: nuclear
8.0 %: mitochondrial
8.0 %: vacuolar
4.0 %: cytoskeletal
4.0 %: Golgi
4.0 %: cytoplasmic

>> prediction for Contig-U02610-1 is end

VS (DIR, S) 0
VH (FL, L) 0
VF (FL, S) 0
AH (FL, L) 0
AF (FL, S) 1
SL (DIR, L) 0
SS (DIR, S) 0
SH (FL, L) 0
SF (FL, S) 1
CH (FL, L) 0
CF (FL, S) 1
FCL (DIR, L) 0
FC (DIR, S) 0
FC-IC (SUB) 0