Contig-U14351-1
Contig ID Contig-U14351-1
Contig update 2002.12.18
Contig sequence
>Contig-U14351-1 (Contig-U14351-1Q) /CSM_Contig/Contig-U14351-1Q.Seq.d
GGAGTTGGGCCGCTCTTATCATAATAATTATGGACACAAATGATTCTATC
ATTACCTTGACATCTTAGGTATATTAAAATAATCAATCTGATAAGTTGCT
AATTACCCTCTCTTATAGTGTTAATTAAATAAAAAAAAAAAGATGTCAAG
TGCTCAAGAAATTGTTGATAAAGTAGACCAACTTCACCTCGAACGTGAGT
TTGTAAAGATTTCAGAATTATTAACTGAAGGTCACAAACAATATCCAGAA
GATGTCGAGATAATGTGGAGACTTGCCAGATCATACTTTGACAAGAATGA
AGAAGTCGCTAATAAAGATGAAAAGAAAAAACTCATTGAACAAGCTTTAG
AACTTACCAACAAAGCCTCAACTATTAACCCAAATCATTGGGCTGTTCAT
AAATGGTTAGCAATTTTAATTTCAGCTTTAGGTGATCATATTTCATCAAA
AGAAAAGATTGCAAATGCATTCAAAATCAAAGATCATGCAGTCAAAGCAA
ATGAATTAAAACCAAATGATGCAACCACATTACATTTATTAGGTCGTTGG
TGTTTCTCAATTTCCTCAATTGGTTGGATTGAAAGAACTGCCGCCAGCGC
TTTGTTTGGAACCCCACCAACATCAACTTATGATGAAGCTTTGACTTACT
TTTTAGAAGCATACAAATGTGACCCAACCAACATTCGTAACGCCCTCTTC
ACTGGTGACACCTATGCTGCCCTTAAAGATAATGCCAAAGCTAAAGAGTT
TTACAAAATTGCTGCTGCAATCGAACCAAAATCAGAATTTGATAAAAATT
TAGTCAAAGAAGCCCAAAATAAAGCTAAATAAATAAATATTTAAATTTTA
TTATTTGTATAA

Gap no gap
Contig length 862
Chromosome number (1..6, M) 3
Chromosome length 6358359
Start point 1178078
End point 1178864
Strand (PLUS/MINUS) PLUS
Number of clones 4
Number of EST 4
Link to clone list U14351
List of clone(s)

est1=CHI642E,1,763
est2=VSJ842E,131,855
est3=VSE877Z,159,863
est4=VSD623Z,247,725
Translated Amino Acid sequence
elgrsyhnnyghk*fyhyldilgilk*si**vanypll*c*LNKKKKMSSAQEIVDKVDQ
LHLEREFVKISELLTEGHKQYPEDVEIMWRLARSYFDKNEEVANKDEKKKLIEQALELTN
KASTINPNHWAVHKWLAILISALGDHISSKEKIANAFKIKDHAVKANELKPNDATTLHLL
GRWCFSISSIGWIERTAASALFGTPPTSTYDEALTYFLEAYKCDPTNIRNALFTGDTYAA
LKDNAKAKEFYKIAAAIEPKSEFDKNLVKEAQNKAK*ini*illfv*


Translated Amino Acid sequence (All Frames)
Frame A:
gvgplls**lwtqmilslp*hlryikiinlisc*lpslivlik*kkkdvkcsrnc**srp
tsprt*vckdfriin*rsqtisrrcrdnvetcqiil*qe*rsr**r*kekth*tsfrtyq
qslny*pkslgcs*mvsnfnfsfr*syfikrkdckciqnqrscsqsk*iktk*cnhitfi
rslvflnflnwld*kncrqrfvwnptninl**sfdllfrsiqm*pnqhs*rplhw*hlcc
p*r*cqs*rvlqncccnrtkiri**kfsqrspk*s*inkylnfiici


Frame B:
elgrsyhnnyghk*fyhyldilgilk*si**vanypll*c*LNKKKKMSSAQEIVDKVDQ
LHLEREFVKISELLTEGHKQYPEDVEIMWRLARSYFDKNEEVANKDEKKKLIEQALELTN
KASTINPNHWAVHKWLAILISALGDHISSKEKIANAFKIKDHAVKANELKPNDATTLHLL
GRWCFSISSIGWIERTAASALFGTPPTSTYDEALTYFLEAYKCDPTNIRNALFTGDTYAA
LKDNAKAKEFYKIAAAIEPKSEFDKNLVKEAQNKAK*ini*illfv*


Frame C:
swaaliiiimdtndsiitlts*vy*nnqsdkllitlsysvn*ikkkrcqvlkkllik*tn
ftsnvsl*rfqny*lkvtnniqkmsr*cgdlpdhtltrmkkslikmkrknslnkl*nlpt
kpqlltqiiglfing*qf*fql*viifhqkkrlqmhskskimqskqmn*nqmmqphyiy*
vvgvsqfpqlvglkelppalclephqhqlmmkl*ltf*khtnvtqptfvtpsslvtpmlp
lkimpklksftklllqsnqnqnliki*skkpkiklnk*ifkfyyly


own update 2004. 6.10
Homology vs CSM-cDNA
Query= Contig-U14351-1 (Contig-U14351-1Q)
/CSM_Contig/Contig-U14351-1Q.Seq.d
(862 letters)

Database: CSM
6905 sequences; 5,674,871 total letters


Score E
Sequences producing significant alignments: (bits) Value

Contig-U14351-1 (Contig-U14351-1Q) /CSM_Contig/Conti... 1643 0.0
Contig-U06544-1 (Contig-U06544-1Q) /CSM_Contig/Conti... 44 2e-04
Contig-U13599-1 (Contig-U13599-1Q) /CSM_Contig/Conti... 42 0.001
Contig-U01498-1 (Contig-U01498-1Q) /CSM_Contig/Conti... 42 0.001
Contig-U13264-1 (Contig-U13264-1Q) /CSM_Contig/Conti... 40 0.004
Contig-U12487-1 (Contig-U12487-1Q) /CSM_Contig/Conti... 40 0.004
Contig-U09353-1 (Contig-U09353-1Q) /CSM_Contig/Conti... 40 0.004
Contig-U05026-1 (Contig-U05026-1Q) /CSM_Contig/Conti... 40 0.004
Contig-U04524-1 (Contig-U04524-1Q) /CSM_Contig/Conti... 40 0.004
Contig-U01814-1 (Contig-U01814-1Q) /CSM_Contig/Conti... 40 0.004

>Contig-U14351-1 (Contig-U14351-1Q) /CSM_Contig/Contig-U14351-1Q.Seq.d
Length = 862

Score = 1643 bits (829), Expect = 0.0
Identities = 851/862 (98%)
Strand = Plus / Plus


Query: 1 ggagttgggccgctcttatcataataattatggacacaaatgattctatcattaccttga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ggagttgggccgctcttatcataataattatggacacaaatgattctatcattaccttga 60


Query: 61 catcttaggtatattaaaataatcaatctgataagttgctaattaccctctcttatagtg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 catcttaggtatattaaaataatcaatctgataagttgctaattaccctctcttatagtg 120


Query: 121 ttaattaaatnnnnnnnnnnngatgtcaagtgctcaagaaattgttgataaagtagacca 180
|||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ttaattaaataaaaaaaaaaagatgtcaagtgctcaagaaattgttgataaagtagacca 180


Query: 181 acttcacctcgaacgtgagtttgtaaagatttcagaattattaactgaaggtcacaaaca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 acttcacctcgaacgtgagtttgtaaagatttcagaattattaactgaaggtcacaaaca 240


Query: 241 atatccagaagatgtcgagataatgtggagacttgccagatcatactttgacaagaatga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 atatccagaagatgtcgagataatgtggagacttgccagatcatactttgacaagaatga 300


Query: 301 agaagtcgctaataaagatgaaaagaaaaaactcattgaacaagctttagaacttaccaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 agaagtcgctaataaagatgaaaagaaaaaactcattgaacaagctttagaacttaccaa 360


Query: 361 caaagcctcaactattaacccaaatcattgggctgttcataaatggttagcaattttaat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 caaagcctcaactattaacccaaatcattgggctgttcataaatggttagcaattttaat 420


Query: 421 ttcagctttaggtgatcatatttcatcaaaagaaaagattgcaaatgcattcaaaatcaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 ttcagctttaggtgatcatatttcatcaaaagaaaagattgcaaatgcattcaaaatcaa 480


Query: 481 agatcatgcagtcaaagcaaatgaattaaaaccaaatgatgcaaccacattacatttatt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 agatcatgcagtcaaagcaaatgaattaaaaccaaatgatgcaaccacattacatttatt 540


Query: 541 aggtcgttggtgtttctcaatttcctcaattggttggattgaaagaactgccgccagcgc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 aggtcgttggtgtttctcaatttcctcaattggttggattgaaagaactgccgccagcgc 600


Query: 601 tttgtttggaaccccaccaacatcaacttatgatgaagctttgacttactttttagaagc 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 tttgtttggaaccccaccaacatcaacttatgatgaagctttgacttactttttagaagc 660


Query: 661 atacaaatgtgacccaaccaacattcgtaacgccctcttcactggtgacacctatgctgc 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 atacaaatgtgacccaaccaacattcgtaacgccctcttcactggtgacacctatgctgc 720


Query: 721 ccttaaagataatgccaaagctaaagagttttacaaaattgctgctgcaatcgaaccaaa 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 ccttaaagataatgccaaagctaaagagttttacaaaattgctgctgcaatcgaaccaaa 780


Query: 781 atcagaatttgataaaaatttagtcaaagaagcccaaaataaagctaaataaataaatat 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 atcagaatttgataaaaatttagtcaaagaagcccaaaataaagctaaataaataaatat 840


Query: 841 ttaaattttattatttgtataa 862
||||||||||||||||||||||
Sbjct: 841 ttaaattttattatttgtataa 862


>Contig-U06544-1 (Contig-U06544-1Q) /CSM_Contig/Contig-U06544-1Q.Seq.d
Length = 653

Score = 44.1 bits (22), Expect = 2e-04
Identities = 28/30 (93%)
Strand = Plus / Minus


Query: 817 aaataaagctaaataaataaatatttaaat 846
||||||| |||||||||||||||||||||
Sbjct: 635 aaataaatataaataaataaatatttaaat 606


>Contig-U13599-1 (Contig-U13599-1Q) /CSM_Contig/Contig-U13599-1Q.Seq.d
Length = 145

Score = 42.1 bits (21), Expect = 0.001
Identities = 21/21 (100%)
Strand = Plus / Minus


Query: 826 taaataaataaatatttaaat 846
|||||||||||||||||||||
Sbjct: 74 taaataaataaatatttaaat 54


Database: CSM
Posted date: Jun 9, 2004 7:35 PM
Number of letters in database: 5,674,871
Number of sequences in database: 6905

Lambda K H
1.37 0.711 1.31

Gapped
Lambda K H
1.37 0.711 1.31


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 18,239
Number of Sequences: 6905
Number of extensions: 18239
Number of successful extensions: 3570
Number of sequences better than 10.0: 306
length of query: 862
length of database: 5,674,871
effective HSP length: 16
effective length of query: 846
effective length of database: 5,564,391
effective search space: 4707474786
effective search space used: 4707474786
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 15 (30.2 bits)
dna update 2008.12.21
Homology vs DNA
Query= Contig-U14351-1 (Contig-U14351-1Q) /CSM_Contig/Contig-U14351-1Q.Seq.d
(862 letters)

Database: ddbj_A
92,845,959 sequences; 95,242,211,685 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value N

(AU263449) Dictyostelium discoideum vegetative cDNA clone:VS... 1243 0.0 1
(BJ380773) Dictyostelium discoideum cDNA clone:ddc39c12, 3' ... 1233 0.0 1
(AU270557) Dictyostelium discoideum vegetative cDNA clone:VS... 1078 0.0 1
(AU270556) Dictyostelium discoideum vegetative cDNA clone:VS... 1007 0.0 1
(BJ366521) Dictyostelium discoideum cDNA clone:ddc39c12, 5' ... 718 0.0 2
(AU264324) Dictyostelium discoideum vegetative cDNA clone:VS... 914 0.0 1
(AC115613) Dictyostelium discoideum chromosome 2 map 209116-... 226 1e-54 1
(AC116986) Dictyostelium discoideum chromosome 2 map 2234041... 218 3e-52 1
(DQ466086) Clostridium phage phiC2, complete genome. 42 0.12 4
(EU115830) Dictyostelium discoideum Ddi2511 RNA, complete se... 50 0.14 1
(BZ261862) CH230-521G3.TJ CHORI-230 Segment 2 Rattus norvegi... 46 0.21 2
(AC149029) Alligator mississippiensis clone VMRC8-367D4, WOR... 48 0.55 1
(EJ708306) 1092956062656 Global-Ocean-Sampling_GS-30-02-01-1... 48 0.55 1
(EI513439) MUGQ_CH252P232H17Sp6_CN404_073 CHORI-252 Vervet M... 36 1.5 2
(ET021305) MUGQ_CH252P328K04T7_CP615_006 CHORI-252 Vervet Mo... 36 1.5 2
(CT739527) Paramecium tetraurelia 5-PRIME EST from clone LK0... 32 2.2 3
(AC125373) Mus musculus BAC clone RP23-379A13 from chromosom... 46 2.2 1
(AC183598) Pan troglodytes BAC clone CH251-455P14 from chrom... 46 2.2 1
(AM452261) Vitis vinifera contig VV78X064446.6, whole genome... 46 2.2 1
(AC005011) Homo sapiens BAC clone GS1-111G14 from 7, complet... 46 2.2 1
(AC130143) Rattus norvegicus clone CH230-171A22, WORKING DRA... 46 2.2 1
(DU036728) 19366 Tomato HindIII BAC Library Solanum lycopers... 46 2.2 1
(DE960663) Macropus eugenii DNA, BAC clone: MEB1-162A23_R, 3... 46 2.2 1
(AC214855) Pan troglodytes chromosome 7 clone CH251-311M8, W... 34 2.2 5
(FF576670) TTEEB53THB Tetrahymena thermophila conjugation cD... 36 2.3 3
(CT814469) Paramecium tetraurelia 5-PRIME EST from clone LK0... 32 2.4 3
(ES640346) NVPEI23TR NVPA Nasonia vitripennis cDNA, mRNA seq... 34 2.4 3
(CT761224) Paramecium tetraurelia 5-PRIME EST from clone LK0... 32 2.4 3
(CT804240) Paramecium tetraurelia 5-PRIME EST from clone LK0... 32 2.5 3
(CT804451) Paramecium tetraurelia 5-PRIME EST from clone LK0... 32 2.6 3
(CT743080) Paramecium tetraurelia 5-PRIME EST from clone LK0... 32 2.8 3
(CT796602) Paramecium tetraurelia 5-PRIME EST from clone LK0... 32 2.9 3
(CT823009) Paramecium tetraurelia 5-PRIME EST from clone LK0... 32 3.2 3
(CT793534) Paramecium tetraurelia 5-PRIME EST from clone LK0... 32 3.3 3
(CT753193) Paramecium tetraurelia 5-PRIME EST from clone LK0... 32 3.5 3
(CT793677) Paramecium tetraurelia 5-PRIME EST from clone LK0... 32 4.2 3
(CT811709) Paramecium tetraurelia 5-PRIME EST from clone LK0... 32 4.4 3
(CT757137) Paramecium tetraurelia 5-PRIME EST from clone LK0... 32 4.5 3
(CT785253) Paramecium tetraurelia 5-PRIME EST from clone LK0... 32 4.5 3
(AC129291) Mus musculus BAC clone RP24-491O22 from chromosom... 38 4.6 5
(CT802395) Paramecium tetraurelia 5-PRIME EST from clone LK0... 32 4.7 3
(CT783998) Paramecium tetraurelia 5-PRIME EST from clone LK0... 32 4.9 3
(CP000915) Francisella tularensis subsp. mediasiatica FSC147... 34 4.9 19
(CT785821) Paramecium tetraurelia 5-PRIME EST from clone LK0... 32 5.0 3
(CT802854) Paramecium tetraurelia 5-PRIME EST from clone LK0... 32 5.1 3
(AC099572) Mus musculus chromosome 15, clone RP23-16A17, com... 36 5.2 3
(CT813871) Paramecium tetraurelia 5-PRIME EST from clone LK0... 32 5.8 3
(CT738670) Paramecium tetraurelia 3-PRIME EST from clone LK0... 32 6.1 3
(CT791115) Paramecium tetraurelia 5-PRIME EST from clone LK0... 32 6.7 3
(CT801457) Paramecium tetraurelia 5-PRIME EST from clone LK0... 32 6.9 3
(CT782074) Paramecium tetraurelia 5-PRIME EST from clone LK0... 32 6.9 3
(CT813971) Paramecium tetraurelia 5-PRIME EST from clone LK0... 32 7.2 3
(CT795113) Paramecium tetraurelia 3-PRIME EST from clone LK0... 32 8.3 3
(AL808106) Mouse DNA sequence from clone RP23-281P6 on chrom... 44 8.6 1
(AC132585) Mus musculus BAC clone RP24-355K7 from chromosome... 44 8.6 1
(AC079243) Mus musculus strain C57BL6/J chromosome 6 clone R... 44 8.6 1
(CP000585) Ostreococcus lucimarinus CCE9901 chromosome 5, co... 44 8.6 1
(AC091067) Homo sapiens chromosome 18, clone RP11-702M18, co... 44 8.6 1
(AC015861) Homo sapiens, clone RP11-45A1, complete sequence. 44 8.6 1
(AC142486) Rattus norvegicus clone CH230-522E23, *** SEQUENC... 44 8.6 1
(AC136855) Rattus norvegicus clone CH230-70O16, *** SEQUENCI... 44 8.6 1
(AC134515) Rattus norvegicus clone CH230-10I6, *** SEQUENCIN... 44 8.6 1
(AC134104) Rattus norvegicus clone CH230-12I13, *** SEQUENCI... 44 8.6 1
(AC133713) Rattus norvegicus clone CH230-74P16, WORKING DRAF... 44 8.6 1
(AC133484) Rattus norvegicus clone CH230-191C3, *** SEQUENCI... 44 8.6 1
(AC132723) Rattus norvegicus clone CH230-40C15, *** SEQUENCI... 44 8.6 1
(AC131809) Rattus norvegicus clone CH230-120F17, *** SEQUENC... 44 8.6 1
(AC131444) Rattus norvegicus clone CH230-5A7, *** SEQUENCING... 44 8.6 1
(AC131442) Rattus norvegicus clone CH230-5A10, *** SEQUENCIN... 44 8.6 1
(AC131367) Rattus norvegicus clone CH230-58B20, WORKING DRAF... 44 8.6 1
(AC130617) Rattus norvegicus clone CH230-150K4, *** SEQUENCI... 44 8.6 1
(AC128778) Rattus norvegicus clone CH230-427E20, *** SEQUENC... 44 8.6 1
(AC127978) Rattus norvegicus clone CH230-342M6, *** SEQUENCI... 44 8.6 1
(AC126890) Rattus norvegicus clone CH230-181P16, WORKING DRA... 44 8.6 1
(AC126632) Rattus norvegicus clone CH230-440I11, WORKING DRA... 44 8.6 1
(AC122066) Rattus norvegicus clone CH230-57G16, WORKING DRAF... 44 8.6 1
(AC119110) Rattus norvegicus clone CH230-259O14, *** SEQUENC... 44 8.6 1
(AC118838) Rattus norvegicus clone CH230-216L16, *** SEQUENC... 44 8.6 1
(AC114203) Rattus norvegicus clone CH230-216M17, WORKING DRA... 44 8.6 1
(AC114118) Rattus norvegicus clone CH230-12I3, *** SEQUENCIN... 44 8.6 1
(AC113750) Rattus norvegicus clone CH230-186O6, *** SEQUENCI... 44 8.6 1
(AC112765) Rattus norvegicus clone CH230-197J17, *** SEQUENC... 44 8.6 1
(AC111930) Rattus norvegicus clone CH230-154D3, WORKING DRAF... 44 8.6 1
(AC110386) Rattus norvegicus clone CH230-275F2, *** SEQUENCI... 44 8.6 1
(AC108658) Rattus norvegicus clone CH230-93H13, *** SEQUENCI... 44 8.6 1
(AC106116) Rattus norvegicus clone CH230-18P4, *** SEQUENCIN... 44 8.6 1
(AC105824) Rattus norvegicus chromosome 18 clone CH230-141H1... 44 8.6 1
(AC105604) Rattus norvegicus chromosome 18 clone CH230-166N1... 44 8.6 1
(AC099002) Rattus norvegicus clone CH230-116I21, *** SEQUENC... 44 8.6 1
(AC098608) Rattus norvegicus clone CH230-149B18, *** SEQUENC... 44 8.6 1
(AC098542) Rattus norvegicus clone CH230-99J13, WORKING DRAF... 44 8.6 1
(AC098343) Rattus norvegicus clone CH230-1P15, *** SEQUENCIN... 44 8.6 1
(AC097760) Rattus norvegicus clone CH230-78E1, *** SEQUENCIN... 44 8.6 1
(AC096464) Rattus norvegicus clone CH230-109B16, *** SEQUENC... 44 8.6 1
(AC096015) Rattus norvegicus clone CH230-29G18, WORKING DRAF... 44 8.6 1
(AC094334) Rattus norvegicus clone CH230-3J9, *** SEQUENCING... 44 8.6 1
(CU074328) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 44 8.6 1
(AP002441) Homo sapiens genomic DNA, chromosome 18q22 clone:... 44 8.6 1
(AC216502) Muntiacus muntjak vaginalis clone CH244-65I19, WO... 44 8.6 1
(AC194379) Zea mays chromosome 4 clone ZMMBBb-582E12; ZMMBBb... 44 8.6 1

>(AU263449) Dictyostelium discoideum vegetative cDNA clone:VSE877,
3' end single read.
Length = 705

Score = 1243 bits (627), Expect = 0.0
Identities = 627/627 (100%)
Strand = Plus / Plus


Query: 159 aaattgttgataaagtagaccaacttcacctcgaacgtgagtttgtaaagatttcagaat 218
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aaattgttgataaagtagaccaacttcacctcgaacgtgagtttgtaaagatttcagaat 60


Query: 219 tattaactgaaggtcacaaacaatatccagaagatgtcgagataatgtggagacttgcca 278
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tattaactgaaggtcacaaacaatatccagaagatgtcgagataatgtggagacttgcca 120


Query: 279 gatcatactttgacaagaatgaagaagtcgctaataaagatgaaaagaaaaaactcattg 338
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gatcatactttgacaagaatgaagaagtcgctaataaagatgaaaagaaaaaactcattg 180


Query: 339 aacaagctttagaacttaccaacaaagcctcaactattaacccaaatcattgggctgttc 398
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 aacaagctttagaacttaccaacaaagcctcaactattaacccaaatcattgggctgttc 240


Query: 399 ataaatggttagcaattttaatttcagctttaggtgatcatatttcatcaaaagaaaaga 458
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ataaatggttagcaattttaatttcagctttaggtgatcatatttcatcaaaagaaaaga 300


Query: 459 ttgcaaatgcattcaaaatcaaagatcatgcagtcaaagcaaatgaattaaaaccaaatg 518
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ttgcaaatgcattcaaaatcaaagatcatgcagtcaaagcaaatgaattaaaaccaaatg 360


Query: 519 atgcaaccacattacatttattaggtcgttggtgtttctcaatttcctcaattggttgga 578
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 atgcaaccacattacatttattaggtcgttggtgtttctcaatttcctcaattggttgga 420


Query: 579 ttgaaagaactgccgccagcgctttgtttggaaccccaccaacatcaacttatgatgaag 638
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 ttgaaagaactgccgccagcgctttgtttggaaccccaccaacatcaacttatgatgaag 480


Query: 639 ctttgacttactttttagaagcatacaaatgtgacccaaccaacattcgtaacgccctct 698
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 ctttgacttactttttagaagcatacaaatgtgacccaaccaacattcgtaacgccctct 540


Query: 699 tcactggtgacacctatgctgcccttaaagataatgccaaagctaaagagttttacaaaa 758
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 tcactggtgacacctatgctgcccttaaagataatgccaaagctaaagagttttacaaaa 600


Query: 759 ttgctgctgcaatcgaaccaaaatcag 785
|||||||||||||||||||||||||||
Sbjct: 601 ttgctgctgcaatcgaaccaaaatcag 627

Lambda K H
1.37 0.711 1.31

Matrix: blastn matrix:1 -3
Number of Sequences: 92845959
Number of Hits to DB: 934,359,152
Number of extensions: 59380320
Number of successful extensions: 4461456
Number of sequences better than 10.0: 125
Length of query: 862
Length of database: 95,242,211,685
Length adjustment: 24
Effective length of query: 838
Effective length of database: 97,308,875,965
Effective search space: 81544838058670
Effective search space used: 81544838058670
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)

protein update 2009. 7.11
Homology vs Protein
Query= Contig-U14351-1 (Contig-U14351-1Q) /CSM_Contig/Contig-U14351-1Q.Seq.d
(862 letters)

Database: nrp_B
3,236,559 sequences; 1,051,180,864 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value

BC054253_1(BC054253|pid:none) Xenopus laevis microtubule-associa... 170 6e-41
BC088015_1(BC088015|pid:none) Xenopus tropicalis hypothetical LO... 167 3e-40
AY028171_5(AY028171|pid:none) Leishmania donovani extra chromoso... 161 2e-38
(Q4G069) RecName: Full=Regulator of microtubule dynamics protein... 159 9e-38
CT005258_151(CT005258|pid:none) Leishmania major strain Friedlin... 159 1e-37
AF151848_1(AF151848|pid:none) Homo sapiens CGI-90 protein mRNA, ... 158 3e-37
(Q96DB5) RecName: Full=Regulator of microtubule dynamics protein... 158 3e-37
(Q5R8E4) RecName: Full=Regulator of microtubule dynamics protein... 158 3e-37
(Q32KL4) RecName: Full=Regulator of microtubule dynamics protein... 157 6e-37
AK002442_1(AK002442|pid:none) Mus musculus adult male kidney cDN... 151 2e-35
BC025158_1(BC025158|pid:none) Mus musculus family with sequence ... 151 2e-35
AK010421_1(AK010421|pid:none) Mus musculus ES cells cDNA, RIKEN ... 151 2e-35
(Q9DCV4) RecName: Full=Regulator of microtubule dynamics protein... 151 2e-35
BC151918_1(BC151918|pid:none) Danio rerio zgc:171674, mRNA (cDNA... 149 9e-35
(Q5EAU9) RecName: Full=Regulator of microtubule dynamics protein... 128 3e-28
DQ215526_1(DQ215526|pid:none) Taeniopygia guttata clone 0063P003... 127 4e-28
Z81526_3(Z81526|pid:none) Caenorhabditis elegans Cosmid F33H2, c... 123 7e-27
FN357708_11(FN357708|pid:none) Schistosoma mansoni genome sequen... 122 2e-26
T18764(T18764) hypothetical protein B0491.3 - Caenorhabditis ele... 120 6e-26
Z81042_6(Z81042|pid:none) Caenorhabditis elegans Cosmid C27H6, c... 118 3e-25
T19537(T19537) hypothetical protein C27H6.4 - Caenorhabditis ele... 118 3e-25
Z81042_8(Z81042|pid:none) Caenorhabditis elegans Cosmid C27H6, c... 118 3e-25
FN317939_1(FN317939|pid:none) Schistosoma japonicum isolate Anhu... 117 4e-25
(Q2TBQ7) RecName: Full=Regulator of microtubule dynamics protein... 115 2e-24
BC109797_1(BC109797|pid:none) Bos taurus family with sequence si... 115 2e-24
(Q95LL7) RecName: Full=Regulator of microtubule dynamics protein... 114 4e-24
AK303122_1(AK303122|pid:none) Homo sapiens cDNA FLJ53118 complet... 114 4e-24
AF450129_1(AF450129|pid:none) Homo sapiens BLOCK18 gene, exon 15... 114 5e-24
AF435956_1(AF435956|pid:none) Homo sapiens unknown mRNA. 114 5e-24
(Q8NHM0) RecName: Full=Regulator of microtubule dynamics protein... 114 5e-24
(Q66H15) RecName: Full=Regulator of microtubule dynamics protein... 113 7e-24
AY811423_1(AY811423|pid:none) Schistosoma japonicum SJCHGC06109 ... 113 7e-24
BC163078_1(BC163078|pid:none) Danio rerio family with sequence s... 112 2e-23
AB070101_1(AB070101|pid:none) Macaca fascicularis testis cDNA cl... 112 2e-23
(Q498D5) RecName: Full=Regulator of microtubule dynamics protein... 111 3e-23
AK146299_1(AK146299|pid:none) Mus musculus CRL-1722 L5178Y-R cDN... 111 4e-23
(Q3UJU9) RecName: Full=Regulator of microtubule dynamics protein... 109 1e-22
AK153322_1(AK153322|pid:none) Mus musculus bone marrow macrophag... 109 1e-22
BC055754_1(BC055754|pid:none) Mus musculus family with sequence ... 109 1e-22
AB070026_1(AB070026|pid:none) Macaca fascicularis testis cDNA cl... 108 2e-22
AC016689_1(AC016689|pid:none) Homo sapiens BAC clone RP11-81H20 ... 107 5e-22
AK057516_1(AK057516|pid:none) Homo sapiens cDNA FLJ32954 fis, cl... 107 5e-22
(Q5R6Z1) RecName: Full=Regulator of microtubule dynamics protein... 106 9e-22
(Q8BSE0) RecName: Full=Regulator of microtubule dynamics protein... 105 1e-21
AB000782_1(AB000782|pid:none) Homo sapiens hucep-10 mRNA for cer... 105 1e-21
AJ242719_1(AJ242719|pid:none) Homo sapiens mRNA for partial puta... 105 3e-21
BC008970_1(BC008970|pid:none) Homo sapiens family with sequence ... 105 3e-21
(Q1JQC5) RecName: Full=Regulator of microtubule dynamics protein... 104 3e-21
AK297896_1(AK297896|pid:none) Homo sapiens cDNA FLJ59260 complet... 103 1e-20
BC024059_1(BC024059|pid:none) Mus musculus family with sequence ... 102 1e-20
AK095462_1(AK095462|pid:none) Homo sapiens cDNA FLJ38143 fis, cl... 98 4e-19
CP001101_1372(CP001101|pid:none) Chlorobium phaeobacteroides BS1... 87 9e-16
CP000607_942(CP000607|pid:none) Chlorobium phaeovibrioides DSM 2... 83 1e-14
AY811802_1(AY811802|pid:none) Schistosoma japonicum SJCHGC09126 ... 81 5e-14
CP000108_1124(CP000108|pid:none) Chlorobium chlorochromatii CaD3... 80 9e-14
AK123192_1(AK123192|pid:none) Homo sapiens cDNA FLJ41198 fis, cl... 80 1e-13
T25913(T25913) hypothetical protein T23B3.3 - Caenorhabditis ele... 76 1e-12
CP001100_2019(CP001100|pid:none) Chloroherpeton thalassium ATCC ... 73 1e-11
CP000159_834(CP000159|pid:none) Salinibacter ruber DSM 13855, co... 70 1e-10
CP000383_3562(CP000383|pid:none) Cytophaga hutchinsonii ATCC 334... 67 6e-10
AP009153_792(AP009153|pid:none) Gemmatimonas aurantiaca T-27 DNA... 65 3e-09
CP001032_583(CP001032|pid:none) Opitutus terrae PB90-1, complete... 62 3e-08
CP000482_2707(CP000482|pid:none) Pelobacter propionicus DSM 2379... 62 3e-08
CP000585_245(CP000585|pid:none) Ostreococcus lucimarinus CCE9901... 59 3e-07
AY814877_1(AY814877|pid:none) Schistosoma japonicum SJCHGC06798 ... 53 1e-05
FN357340_36(FN357340|pid:none) Schistosoma mansoni genome sequen... 50 7e-05
CR760019_1(CR760019|pid:none) Xenopus tropicalis finished cDNA, ... 50 7e-05
CP001100_494(CP001100|pid:none) Chloroherpeton thalassium ATCC 3... 50 1e-04
CP000859_1516(CP000859|pid:none) Desulfococcus oleovorans Hxd3, ... 49 3e-04
CP001359_1601(CP001359|pid:none) Anaeromyxobacter dehalogenans 2... 48 5e-04
CP001080_329(CP001080|pid:none) Sulfurihydrogenibium sp. YO3AOP1... 47 8e-04
CP001131_1510(CP001131|pid:none) Anaeromyxobacter sp. K, complet... 47 0.001
CP001089_2075(CP001089|pid:none) Geobacter lovleyi SZ, complete ... 44 0.005
AP009552_1426(AP009552|pid:none) Microcystis aeruginosa NIES-843... 44 0.007
AE001437_1052(AE001437|pid:none) Clostridium acetobutylicum ATCC... 44 0.009
CP001099_1350(CP001099|pid:none) Chlorobaculum parvum NCIB 8327,... 44 0.009
AE001437_1055(AE001437|pid:none) Clostridium acetobutylicum ATCC... 43 0.015
CP000393_2497(CP000393|pid:none) Trichodesmium erythraeum IMS101... 43 0.015
CP000251_2338(CP000251|pid:none) Anaeromyxobacter dehalogenans 2... 42 0.020
AX971338_1(AX971338|pid:none) Sequence 2141 from Patent EP1104808. 42 0.034
AB171044_1(AB171044|pid:none) Macaca fascicularis brain cDNA clo... 42 0.034
CP000526_2543(CP000526|pid:none) Burkholderia mallei SAVP1 chrom... 41 0.059
CP000010_401(CP000010|pid:none) Burkholderia mallei ATCC 23344 c... 41 0.059
CP000804_209(CP000804|pid:none) Roseiflexus castenholzii DSM 139... 41 0.059
CP000572_2927(CP000572|pid:none) Burkholderia pseudomallei 1106a... 40 0.13
CP000124_2970(CP000124|pid:none) Burkholderia pseudomallei 1710b... 40 0.13
CR380949_68(CR380949|pid:none) Candida glabrata strain CBS138 ch... 38 0.38
AE009951_1395(AE009951|pid:none) Fusobacterium nucleatum subsp. ... 38 0.38
CP000053_1394(CP000053|pid:none) Rickettsia felis URRWXCal2, com... 38 0.38
CT573073_804(CT573073|pid:none) Kuenenia stuttgartiensis genome ... 38 0.38
CP000393_407(CP000393|pid:none) Trichodesmium erythraeum IMS101,... 38 0.50
CR382125_906(CR382125|pid:none) Kluyveromyces lactis strain NRRL... 38 0.50
CP000360_4598(CP000360|pid:none) Acidobacteria bacterium Ellin34... 37 0.65
FJ496648_16(FJ496648|pid:none) Salmonella enterica subsp. salama... 37 0.65
CT573072_559(CT573072|pid:none) Kuenenia stuttgartiensis genome ... 37 0.65
AF113847_1(AF113847|pid:none) Drosophila melanogaster kismet (ki... 37 0.85
AF491946_1(AF491946|pid:none) Plasmodium vivax isolate IEC-Brazi... 37 0.85
AE014134_63(AE014134|pid:none) Drosophila melanogaster chromosom... 37 0.85
AE017226_1044(AE017226|pid:none) Treponema denticola ATCC 35405,... 37 0.85
FP102531_63(FP102531|pid:none) magnetite-containing magnetic vib... 37 0.85
AF491950_1(AF491950|pid:none) Plasmodium vivax strain Ong merozo... 37 0.85
CP001287_140(CP001287|pid:none) Cyanothece sp. PCC 8801, complet... 37 0.85
AE014134_62(AE014134|pid:none) Drosophila melanogaster chromosom... 37 0.85
(P38042) RecName: Full=Anaphase-promoting complex subunit CDC27;... 37 1.1
X79489_36(X79489|pid:none) S.cerevisiae genomic DNA, chromosome ... 37 1.1
CP000742_88(CP000742|pid:none) Methanococcus vannielii SB, compl... 37 1.1
CP000821_845(CP000821|pid:none) Shewanella sediminis HAW-EB3, co... 37 1.1
AP009380_1340(AP009380|pid:none) Porphyromonas gingivalis ATCC 3... 37 1.1
AE017180_2600(AE017180|pid:none) Geobacter sulfurreducens PCA, c... 37 1.1
CP000941_2101(CP000941|pid:none) Xylella fastidiosa M12, complet... 36 1.4
CP000806_1237(CP000806|pid:none) Cyanothece sp. ATCC 51142 circu... 36 1.4
AM920428_237(AM920428|pid:none) Penicillium chrysogenum Wisconsi... 36 1.4
T09748(T09748;C64246)DNA-directed DNA polymerase (EC 2.7.7.7) II... 36 1.4
AE000666_69(AE000666|pid:none) Methanothermobacter thermautotrop... 36 1.4
CP000109_1721(CP000109|pid:none) Thiomicrospira crunogena XCL-2,... 36 1.9
CP000446_3127(CP000446|pid:none) Shewanella sp. MR-4, complete g... 36 1.9
CP001348_2591(CP001348|pid:none) Clostridium cellulolyticum H10,... 36 1.9
T21710(T21710)hypothetical protein F33H2.6 - Caenorhabditis eleg... 36 1.9
AF491951_1(AF491951|pid:none) Plasmodium vivax from Bangladesh m... 36 1.9
CP000350_1831(CP000350|pid:none) Leptospira borgpetersenii serov... 36 1.9
CU928174_159(CU928174|pid:none) Zygosaccharomyces rouxii strain ... 36 1.9
AF491948_1(AF491948|pid:none) Plasmodium vivax isolate IEC-Brazi... 35 2.5
AY833018_1(AY833018|pid:none) Plasmodium vivax strain Thailand M... 35 2.5
AM114193_526(AM114193|pid:none) Uncultured methanogenic archaeon... 35 2.5
CP001322_133(CP001322|pid:none) Desulfatibacillum alkenivorans A... 35 2.5
CP000993_182(CP000993|pid:none) Borrelia recurrentis A1, complet... 35 2.5
CP000553_44(CP000553|pid:none) Prochlorococcus marinus str. NATL... 35 3.2
AM746676_2815(AM746676|pid:none) Sorangium cellulosum 'So ce 56'... 35 3.2
AE000657_977(AE000657|pid:none) Aquifex aeolicus VF5, complete g... 35 3.2
(P43016) RecName: Full=Transcriptional regulator hilA; ... 35 3.2
AJ864949_1(AJ864949|pid:none) Plasmodium vivax partial msp3a gen... 35 3.2
A52315_1(A52315|pid:none) Sequence 19 from Patent EP0721989. &X... 35 3.2
CP001291_1331(CP001291|pid:none) Cyanothece sp. PCC 7424, comple... 35 3.2
CP000360_287(CP000360|pid:none) Acidobacteria bacterium Ellin345... 35 3.2
EU016579_19(EU016579|pid:none) Uncultured marine microorganism H... 35 4.2
AM039952_183(AM039952|pid:none) Xanthomonas campestris pv. vesic... 35 4.2
CP001107_3612(CP001107|pid:none) Eubacterium rectale ATCC 33656,... 35 4.2
AE000513_1179(AE000513|pid:none) Deinococcus radiodurans R1 chro... 35 4.2
EU430584_1(EU430584|pid:none) Plasmodium vivax merozoite surface... 35 4.2
CP001291_4612(CP001291|pid:none) Cyanothece sp. PCC 7424, comple... 35 4.2
CP000473_5901(CP000473|pid:none) Solibacter usitatus Ellin6076, ... 35 4.2
CP000469_793(CP000469|pid:none) Shewanella sp. ANA-3, complete g... 35 4.2
AE017221_263(AE017221|pid:none) Thermus thermophilus HB27, compl... 35 4.2
CP000863_1835(CP000863|pid:none) Acinetobacter baumannii ACICU, ... 34 5.5
AE017354_2437(AE017354|pid:none) Legionella pneumophila subsp. p... 34 5.5
CP000993_692(CP000993|pid:none) Borrelia recurrentis A1, complet... 34 5.5
CP000675_2644(CP000675|pid:none) Legionella pneumophila str. Cor... 34 5.5
CR628337_2415(CR628337|pid:none) Legionella pneumophila str. Len... 34 5.5
CP000350_53(CP000350|pid:none) Leptospira borgpetersenii serovar... 34 5.5
CP000086_475(CP000086|pid:none) Burkholderia thailandensis E264 ... 34 5.5
AF491949_1(AF491949|pid:none) Plasmodium vivax isolate IEC-Brazi... 34 5.5
CP000521_1934(CP000521|pid:none) Acinetobacter baumannii ATCC 17... 34 5.5
CP000099_2442(CP000099|pid:none) Methanosarcina barkeri str. Fus... 34 5.5
CP000254_2327(CP000254|pid:none) Methanospirillum hungatei JF-1,... 34 5.5
CP000976_703(CP000976|pid:none) Borrelia duttonii Ly, complete g... 34 5.5
CP001229_1338(CP001229|pid:none) Sulfurihydrogenibium azorense A... 34 7.2
CP001357_1935(CP001357|pid:none) Brachyspira hyodysenteriae WA1,... 34 7.2
CP000103_375(CP000103|pid:none) Nitrosospira multiformis ATCC 25... 34 7.2
CP001052_1181(CP001052|pid:none) Burkholderia phytofirmans PsJN ... 34 7.2
FN321283_1(FN321283|pid:none) Schistosoma japonicum isolate Anhu... 34 7.2
BA000028_1779(BA000028|pid:none) Oceanobacillus iheyensis HTE831... 34 7.2
AP009384_2926(AP009384|pid:none) Azorhizobium caulinodans ORS 57... 34 7.2
FN321286_1(FN321286|pid:none) Schistosoma japonicum isolate Anhu... 34 7.2
CP001390_3456(CP001390|pid:none) Geobacter sp. FRC-32, complete ... 34 7.2
CP000251_1205(CP000251|pid:none) Anaeromyxobacter dehalogenans 2... 34 7.2
FN321289_1(FN321289|pid:none) Schistosoma japonicum isolate Anhu... 34 7.2
AM912960_1(AM912960|pid:none) Uncultured bacterium partial integ... 33 9.4
AC116960_63(AC116960|pid:none) Dictyostelium discoideum chromoso... 33 9.4
AE015927_1584(AE015927|pid:none) Clostridium tetani E88, complet... 33 9.4
(Q8BW49) RecName: Full=Tetratricopeptide repeat protein 12; ... 33 9.4
AK076457_1(AK076457|pid:none) Mus musculus 0 day neonate head cD... 33 9.4
CP001503_827(CP001503|pid:none) Burkholderia glumae BGR1 chromos... 33 9.4
CR954204_74(CR954204|pid:none) Ostreococcus tauri strain OTTH059... 33 9.4
CT573071_845(CT573071|pid:none) Kuenenia stuttgartiensis genome ... 33 9.4
AM494964_123(AM494964|pid:none) Leishmania braziliensis chromoso... 33 9.4
CP000786_2307(CP000786|pid:none) Leptospira biflexa serovar Pato... 33 9.4
CP000393_1249(CP000393|pid:none) Trichodesmium erythraeum IMS101... 33 9.4

>BC054253_1(BC054253|pid:none) Xenopus laevis microtubule-associated
protein, mRNA (cDNA clone MGC:64464 IMAGE:6880991),
complete cds.
Length = 308

Score = 170 bits (430), Expect = 6e-41
Identities = 89/227 (39%), Positives = 139/227 (61%), Gaps = 2/227 (0%)
Frame = +2

Query: 155 QEIVDKVDQLHLEREFVKISELLTEGHKQYPEDVEIMWRLARSYFDKNE-EVANKDEKKK 331
++IV++ D L+ E +K+ ELL++ + D E++WRLAR+ D +DEKK+
Sbjct: 78 EDIVEQADYLYGSGETIKLYELLSQYKDR--NDAELLWRLARAARDMTLLSTTPRDEKKR 135

Query: 332 LIEQALELTNKASTINPNHWAVHKWLAILISALGDHISSKEKIANAFKIKDHAVKANELK 511
L+ ++ + KA ++ WA HKW +I +S +GD+ K KI NA+ +K+H +A EL
Sbjct: 136 LVYESFDCAKKALEVDELCWAAHKWYSICLSNVGDYEGIKTKIGNAYIVKEHLERAKELN 195

Query: 512 PNDATTLHLLGRWCFSISSIGWIERTAASALFGTPPTSTYDEALTYFLEAYKCDP-TNIR 688
P DATT+H++G WC+ + + W + ASALFGTPP++T++EALTYFL+A + DP
Sbjct: 196 PKDATTIHIIGVWCYMFADLPWYQVKIASALFGTPPSATFEEALTYFLQAEEVDPHFYST 255

Query: 689 NALFTGDTYAALKDNAKAKEFYKIAAAIEPKSEFDKNLVKEAQNKAK 829
N LF G TY LK+ + A ++ A +S+ D + KEA + K
Sbjct: 256 NLLFLGKTYLKLKNKSLALDWLTKAKDFPARSDEDIEVQKEATDLLK 302

Lambda K H
0.318 0.134 0.401

Gapped
Lambda K H
0.267 0.0410 0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3236559
Number of Hits to DB: 1,200,976,644
Number of extensions: 20912658
Number of successful extensions: 55524
Number of sequences better than 10.0: 177
Number of HSP's gapped: 55382
Number of HSP's successfully gapped: 185
Length of query: 287
Length of database: 1,051,180,864
Length adjustment: 127
Effective length of query: 160
Effective length of database: 640,137,871
Effective search space: 102422059360
Effective search space used: 102422059360
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)

PSORT

psg: 0.75 gvh: 0.29 alm: 0.43 top: 0.53 tms: 0.00 mit: 0.19 mip: 0.00
nuc: 0.04 erl: 0.00 erm: 0.20 pox: 0.00 px2: 0.00 vac: 0.00 rnp: 0.00
act: 0.00 caa: 0.00 yqr: 0.00 tyr: 0.00 leu: 0.00 gpi: 0.00 myr: 0.00
dna: 0.00 rib: 0.00 bac: 0.00 m1a: 0.00 m1b: 0.00 m2 : 0.00 mNt: 0.00
m3a: 0.00 m3b: 0.00 m_ : 1.00

44.0 %: cytoplasmic
28.0 %: nuclear
24.0 %: cytoskeletal
4.0 %: mitochondrial

>> prediction for Contig-U14351-1 is cyt

VS (DIR, S) 3
VH (FL, L) 0
VF (FL, S) 0
AH (FL, L) 0
AF (FL, S) 0
SL (DIR, L) 0
SS (DIR, S) 0
SH (FL, L) 0
SF (FL, S) 0
CH (FL, L) 1
CF (FL, S) 0
FCL (DIR, L) 0
FC (DIR, S) 0
FC-IC (SUB) 0