Homology vs DNA |
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Homology vs Protein |
Query= Contig-U14299-1 (Contig-U14299-1Q) /CSM_Contig/Contig-U14299-1Q.Seq.d (979 letters)
Database: nrp_B 3,236,559 sequences; 1,051,180,864 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
AC115592_21(AC115592|pid:none) Dictyostelium discoideum chromoso... 243 4e-63 AB112442_1(AB112442|pid:none) Ciona intestinalis Ci-VWFL2 mRNA f... 45 3e-08 AL773560_5(AL773560|pid:none) Pig DNA sequence from clone PigI-5... 43 9e-08 AC116984_103(AC116984|pid:none) Dictyostelium discoideum chromos... 44 1e-07 (Q9UMG7) RecName: Full=Tenascin-X; Short=TN-X; AltName:... 47 2e-07 AL049547_2(AL049547|pid:none) Human DNA sequence from clone RP1-... 47 2e-07 AL645922_24(AL645922|pid:none) Human DNA sequence from clone XXb... 47 2e-07 X71923_1(X71923|pid:none) H.sapiens XB gene for tenascin-X, exon... 47 2e-07 CP001055_918(CP001055|pid:none) Elusimicrobium minutum Pei191, c... 47 8e-07 AB010266_2(AB010266|pid:none) Mus musculus Creb-rp, Tnx, Cyp21 g... 46 3e-06 (Q6ZWJ8) RecName: Full=Cysteine-rich motor neuron 2 protein; ... 49 8e-06 AX817295_1(AX817295|pid:none) Sequence 43 from Patent WO02081517. 37 1e-05 AX817297_1(AX817297|pid:none) Sequence 45 from Patent WO02081517. 37 1e-05 CT009745_1(CT009745|pid:none) Zebrafish DNA sequence from clone ... 42 4e-05 BC163556_1(BC163556|pid:none) Danio rerio tenascin C, mRNA (cDNA... 47 1e-04 DQ096731_1(DQ096731|pid:none) Danio rerio tenascin-C (TNC) mRNA,... 47 1e-04 BX004856_1(BX004856|pid:none) Zebrafish DNA sequence from clone ... 47 1e-04 AB210038_1(AB210038|pid:none) Homo sapiens mRNA for TNC variant ... 38 4e-04 (P24821) RecName: Full=Tenascin; Short=TN; AltName: Ful... 38 4e-04 X56160_1(X56160|pid:none) Human mRNA for tenascin. 38 4e-04 AK304015_1(AK304015|pid:none) Homo sapiens cDNA FLJ60213 complet... 38 4e-04 T10081(T10081;A37199)sperm mitochondrial capsule selenoprotein -... 48 6e-04 AK077172_1(AK077172|pid:none) Mus musculus adult male testis cDN... 47 8e-04 AB112441_1(AB112441|pid:none) Ciona intestinalis Ci-VWFL1 mRNA f... 47 8e-04 CP001055_471(CP001055|pid:none) Elusimicrobium minutum Pei191, c... 47 0.001 (Q5SS00) RecName: Full=DBF4-type zinc finger-containing protein ... 46 0.002 A55035(A55035;S45034) cysteine-rich protein CRP1 - earthworm (En... 41 0.002 T27283(T27283)hypothetical protein Y64G10A.f - Caenorhabditis el... 36 0.004 EU974210_1(EU974210|pid:none) Zea mays clone 442907 keratin-asso... 42 0.005 JC5598(JC5598) mucin - rat &U83139_1(U83139|pid:none) 44 0.006 AK079449_1(AK079449|pid:none) Mus musculus adult female vagina c... 39 0.007 BC151843_1(BC151843|pid:none) Homo sapiens tenascin C, mRNA (cDN... 38 0.008 CP001055_523(CP001055|pid:none) Elusimicrobium minutum Pei191, c... 44 0.008 EU972808_1(EU972808|pid:none) Zea mays clone 388422 unknown mRNA. 36 0.009 AB076354_1(AB076354|pid:none) Homo sapiens KRTAP18.7 mRNA for ke... 35 0.009 (P60368) RecName: Full=Keratin-associated protein 10-2; AltName:... 32 0.009 AM746676_5248(AM746676|pid:none) Sorangium cellulosum 'So ce 56'... 32 0.011 EU955480_1(EU955480|pid:none) Zea mays clone 1534022 unknown mRNA. 35 0.014 BC120950_1(BC120950|pid:none) Homo sapiens keratin associated pr... 33 0.015 (P60370) RecName: Full=Keratin-associated protein 10-5; AltName:... 33 0.015 AB076352_1(AB076352|pid:none) Homo sapiens KRTAP18.5 mRNA for ke... 33 0.015 AK122555_1(AK122555|pid:none) Mus musculus mRNA for mKIAA1781 pr... 33 0.018 T16840(T16840)hypothetical protein T10E10.4 - Caenorhabditis ele... 39 0.018 (Q80T91) RecName: Full=Multiple epidermal growth factor-like dom... 33 0.018 U39644_2(U39644|pid:none) Caenorhabditis elegans cosmid T10E10, ... 39 0.018 AK051642_1(AK051642|pid:none) Mus musculus 12 days embryo spinal... 33 0.018 (P15265) RecName: Full=Sperm mitochondrial-associated cysteine-r... 43 0.019 EU015401_1(EU015401|pid:none) Strongylocentrotus purpuratus chor... 43 0.019 BC131611_1(BC131611|pid:none) Homo sapiens keratin associated pr... 32 0.019 (P60412) RecName: Full=Keratin-associated protein 10-11; AltName... 32 0.019 FJ039903_1(FJ039903|pid:none) Hordeum vulgare DEP1 (DEP1) mRNA, ... 31 0.019 U54641_1(U54641|pid:none) Chironomus thummi 220 kDa silk protein... 37 0.022 (P60409) RecName: Full=Keratin-associated protein 10-7; AltName:... 35 0.024 BT071595_1(BT071595|pid:none) Picea sitchensis clone WS02926_J21... 42 0.024 EU836312_1(EU836312|pid:none) Peromyscus eremicus isolate PGSC18... 42 0.032 BC119982_1(BC119982|pid:none) Bos taurus keratin associated prot... 33 0.032 BX571800_1(BX571800|pid:none) Zebrafish DNA sequence from clone ... 38 0.036 EU836311_1(EU836311|pid:none) Peromyscus aztecus hylocetes isola... 42 0.042 (Q7ZXL5) RecName: Full=Protein kinase C-binding protein NELL2; A... 33 0.065 J03641_1(J03641|pid:none) Chicken cytotactin mRNA, partial cds, ... 38 0.065 (Q62220) RecName: Full=Keratin-associated protein 5-4; AltName: ... 37 0.070 AC091665_10(AC091665|pid:none) Oryza sativa chromosome 10 clone ... 41 0.071 AB236148_1(AB236148|pid:none) Pholcus phalangioides Pp-sog mRNA ... 41 0.071 AY788097_1(AY788097|pid:none) Peromyscus maniculatus mitochondri... 41 0.071 AF172322_1(AF172322|pid:none) Coturnix coturnix JAC (JAC) mRNA, ... 41 0.071 AK124189_1(AK124189|pid:none) Homo sapiens cDNA FLJ42195 fis, cl... 41 0.071 EU048249_1(EU048249|pid:none) Lytechinus variegatus chordin mRNA... 40 0.093 AJ001402_1(AJ001402|pid:none) Homo sapiens mRNA for MUC5AC prote... 40 0.094 CQ858282_1(CQ858282|pid:none) Sequence 6 from Patent WO2004069136. 40 0.094 (Q8WWQ3) RecName: Full=Mucin-5AC; AltName: Full=Mucin-5 subtype ... 40 0.094 AL591417_4(AL591417|pid:none) Mouse DNA sequence from clone RP23... 35 0.12 AL627123_1(AL627123|pid:none) Mouse DNA sequence from clone RP23... 40 0.12 AK134303_1(AK134303|pid:none) Mus musculus 13 days embryo male t... 40 0.12 AK173032_1(AK173032|pid:none) Mus musculus mRNA for mKIAA0815 pr... 40 0.12 BC058571_1(BC058571|pid:none) Mus musculus multiple EGF-like-dom... 40 0.12 BC140725_1(BC140725|pid:none) Homo sapiens keratin associated pr... 32 0.15 FJ039902_1(FJ039902|pid:none) Triticum aestivum DEP1 (DEP1) mRNA... 30 0.15 (Q9BYQ5) RecName: Full=Keratin-associated protein 4-6; AltName: ... 32 0.15 (Q9BYP9) RecName: Full=Keratin-associated protein 9-9; AltName: ... 40 0.16 M31039_1(M31039|pid:none) Mus musculus complement receptor 3 bet... 40 0.16 A55677(A55677)laminin beta-2 chain precursor (version 1) - human 40 0.16 X79683_1(X79683|pid:none) H.sapiens LAMB2 mRNA for beta2 laminin. 40 0.16 EU596506_1(EU596506|pid:none) Rattus norvegicus tenascin C (Tnc)... 40 0.16 EU836310_1(EU836310|pid:none) Peromyscus leucopus isolate PGSC16... 39 0.21 EU195078_1(EU195078|pid:none) Clytia hemisphaerica nematocyst ou... 39 0.21 (Q6L8H1) RecName: Full=Keratin-associated protein 5-4; AltName: ... 39 0.27 AF250284_141(AF250284|pid:none) Amsacta moorei entomopoxvirus, c... 39 0.27 CP000513_277(CP000513|pid:none) Dichelobacter nodosus VCS1703A, ... 39 0.27 AL034559_42(AL034559|pid:none) Plasmodium falciparum MAL3P7, com... 39 0.27 AL833232_1(AL833232|pid:none) Homo sapiens mRNA; cDNA DKFZp762L1... 33 0.29 (A2VCU8) RecName: Full=Protein kinase C-binding protein NELL2; A... 30 0.30 (P60411) RecName: Full=Keratin-associated protein 10-9; AltName:... 34 0.32 AL133553_4(AL133553|pid:none) Human DNA sequence from clone GS1-... 33 0.32 Z77666_6(Z77666|pid:none) Caenorhabditis elegans Cosmid K08E7, c... 39 0.35 Z77666_9(Z77666|pid:none) Caenorhabditis elegans Cosmid K08E7, c... 39 0.35 AF318334_1(AF318334|pid:none) Homo sapiens pp13479 mRNA, complet... 39 0.35 BC168665_1(BC168665|pid:none) Rattus norvegicus platelet endothe... 39 0.35 BC149826_1(BC149826|pid:none) Bos taurus keratin associated prot... 39 0.36 (P60331) RecName: Full=Keratin-associated protein 10-1; AltName:... 29 0.41 M33753_1(M33753|pid:none) D.melanogaster crumbs protein mRNA, co... 38 0.46 (P10040) RecName: Full=Protein crumbs; AltName: Full=95F; Flags:... 38 0.46 BC069560_1(BC069560|pid:none) Homo sapiens keratin associated pr... 38 0.46 X08030_1(X08030|pid:none) Chicken mRNA fragment for tenascin (cT... 38 0.50 AY386263_77(AY386263|pid:none) Orf virus strain OV-IA82, complet... 38 0.60 AF060203_1(AF060203|pid:none) Biomphalaria glabrata beta integri... 38 0.60 AX647605_1(AX647605|pid:none) Sequence 1797 from Patent EP1270724. 38 0.60 CP000769_2725(CP000769|pid:none) Anaeromyxobacter sp. Fw109-5, c... 38 0.60 AL591496_16(AL591496|pid:none) Mouse DNA sequence from clone RP2... 38 0.60 A26838(A26838)prestalk protein precursor - slime mold (Dictyoste... 38 0.60 AL591496_15(AL591496|pid:none) Mouse DNA sequence from clone RP2... 38 0.60 AE013599_3395(AE013599|pid:none) Drosophila melanogaster chromos... 38 0.61 EU000366_1(EU000366|pid:none) Drosophila melanogaster clone RE17... 38 0.61 AP008215_740(AP008215|pid:none) Oryza sativa (japonica cultivar-... 34 0.66 AP005419_8(AP005419|pid:none) Oryza sativa Japonica Group genomi... 34 0.66 FJ501956_1(FJ501956|pid:none) Oryza sativa Indica Group keratin ... 34 0.66 A43932(A49963;A45106;B45106;A43932;B33532;A61257;PQ0328;)mucin 2... 37 0.79 AE014297_4387(AE014297|pid:none) Drosophila melanogaster chromos... 37 0.79 AF181965_1(AF181965|pid:none) Canis familiaris B-2 integrin (ITG... 37 0.79 (P55949) RecName: Full=Metallothionein-1B; Short=MT-1B;... 37 0.79 (Q02817) RecName: Full=Mucin-2; Short=MUC-2; AltName: F... 37 0.79 CQ824892_1(CQ824892|pid:none) Sequence 3 from Patent EP1431309. 37 0.79 AB236149_1(AB236149|pid:none) Artemia franciscana Af-sog mRNA fo... 37 0.79 AF054584_1(AF054584|pid:none) Sus scrofa domestica clone PGM-Z13... 37 0.79 BC162591_1(BC162591|pid:none) Danio rerio cysteine rich transmem... 37 0.79 (Q7T3Q2) RecName: Full=Cysteine-rich motor neuron 1 protein; ... 37 0.79 (Q891P0) RecName: Full=V-type ATP synthase subunit E 2; AltName:... 37 0.79 Z68155_1(Z68155|pid:none) Homo sapiens LAMB2 gene for laminin be... 37 0.79 EU973332_1(EU973332|pid:none) Zea mays clone 396882 keratin-asso... 37 1.0 CP001323_751(CP001323|pid:none) Micromonas sp. RCC299 chromosome... 37 1.0 AL844509_127(AL844509|pid:none) Plasmodium falciparum 3D7 chromo... 37 1.0 AK221695_1(AK221695|pid:none) Arabidopsis thaliana mRNA for puta... 37 1.0 CP001083_892(CP001083|pid:none) Clostridium botulinum Ba4 str. 6... 37 1.0 BC146642_1(BC146642|pid:none) Danio rerio BMP binding endothelia... 37 1.0 (Q80YX1) RecName: Full=Tenascin; Short=TN; AltName: Ful... 37 1.3 EU553919_1(EU553919|pid:none) Bison bison CD18 (CD18) mRNA, comp... 37 1.3 BC104354_1(BC104354|pid:none) Mus musculus predicted gene, ENSMU... 37 1.3 S44208(S44208) extracellular matrix protein B - Dictyostelium mi... 37 1.3 AL590997_33(AL590997|pid:none) Mouse DNA sequence from clone RP2... 37 1.3 (P32592) RecName: Full=Integrin beta-2; AltName: Full=Cell surfa... 37 1.3 AL732556_3(AL732556|pid:none) Mouse DNA sequence from clone RP24... 37 1.3 AY842449_1(AY842449|pid:none) Bubalus bubalis integrin beta-2 (I... 37 1.3 EU975774_1(EU975774|pid:none) Zea mays clone 500142 hypothetical... 37 1.3 AJ406949_1(AJ406949|pid:none) Homo sapiens partial mRNA for kera... 37 1.3 AK014635_1(AK014635|pid:none) Mus musculus 10 days neonate skin ... 37 1.3 AL732556_1(AL732556|pid:none) Mouse DNA sequence from clone RP24... 37 1.3 M24630_1(M24630|pid:none) Human hexabrachion mRNA, partial cds. 37 1.4 CP000251_2747(CP000251|pid:none) Anaeromyxobacter dehalogenans 2... 37 1.4 (P60410) RecName: Full=Keratin-associated protein 10-8; AltName:... 29 1.5 AB007985_1(AB007985|pid:none) Mesocricetus auratus MCS mRNA for ... 36 1.8 CP001110_67(CP001110|pid:none) Pelodictyon phaeoclathratiforme B... 36 1.8 BC129830_1(BC129830|pid:none) Homo sapiens tenascin R (restricti... 36 1.8 AE014296_356(AE014296|pid:none) Drosophila melanogaster chromoso... 36 1.8 X98085_1(X98085|pid:none) H.sapiens mRNA for tenascin-R. 36 1.8 CP000939_922(CP000939|pid:none) Clostridium botulinum B1 str. Ok... 36 1.8 AK295823_1(AK295823|pid:none) Homo sapiens cDNA FLJ60578 complet... 36 1.8 (Q8BYI9) RecName: Full=Tenascin-R; Short=TN-R; AltName:... 36 1.8 (A8MUX0) RecName: Full=Putative keratin-associated protein 10-li... 36 1.8 (Q05546) RecName: Full=Tenascin-R; Short=TN-R; AltName:... 36 1.8 BC132392_1(BC132392|pid:none) Mus musculus tenascin R, mRNA (cDN... 36 1.8 Z94055_1(Z94055|pid:none) Human DNA sequence from clone RP1-24M1... 36 1.8 BC072469_1(BC072469|pid:none) Rattus norvegicus granulin, mRNA (... 30 1.8 AJ311906_1(AJ311906|pid:none) Mus musculus mRNA for Muc5b protein. 33 2.0 BC030862_1(BC030862|pid:none) Mus musculus mucin 2, mRNA (cDNA c... 36 2.3 BC088400_1(BC088400|pid:none) Rattus norvegicus laminin, beta 2,... 36 2.3 AC131945_1(AC131945|pid:none) Homo sapiens BAC clone RP11-5K24 f... 36 2.3 (Q86XX4) RecName: Full=Extracellular matrix protein FRAS1; Flags... 36 2.3 BC039284_1(BC039284|pid:none) Mus musculus mucin 2, mRNA (cDNA c... 36 2.3 AJ511873_1(AJ511873|pid:none) Mus musculus partial Muc2 gene for... 36 2.3 (Q61292) RecName: Full=Laminin subunit beta-2; AltName: Full=S-l... 36 2.3 AL110498_8(AL110498|pid:none) Caenorhabditis elegans YAC Y64G10A... 36 2.3 BC131821_1(BC131821|pid:none) Homo sapiens Fraser syndrome 1, mR... 36 2.3 (P15800) RecName: Full=Laminin subunit beta-2; AltName: Full=S-l... 36 2.3 BC034197_1(BC034197|pid:none) Mus musculus mucin 2, mRNA (cDNA c... 36 2.3 BC026051_1(BC026051|pid:none) Mus musculus laminin, beta 2, mRNA... 36 2.3 BC131820_1(BC131820|pid:none) Homo sapiens Fraser syndrome 1, mR... 36 2.3 EF601709_1(EF601709|pid:none) Gekko gecko beta-keratin 8 mRNA, c... 36 2.3 DQ017481_1(DQ017481|pid:none) Plasmodium falciparum leucine-rich... 36 2.3 X82245_1(X82245|pid:none) H.sapiens nidogen gene (exon 1). 35 3.0 (Q9JLL0) RecName: Full=Cysteine-rich motor neuron 1 protein; ... 35 3.0 AL122018_1(AL122018|pid:none) Human DNA sequence from clone RP4-... 35 3.0 (A2ARV4) RecName: Full=Low-density lipoprotein receptor-related ... 35 3.0 (P14543) RecName: Full=Nidogen-1; Short=NID-1; AltName:... 35 3.0 AK049346_1(AK049346|pid:none) Mus musculus ES cells cDNA, RIKEN ... 35 3.0 AF168680_1(AF168680|pid:none) Mus musculus cysteine-rich repeat-... 35 3.0 S14324(S14324)platelet glycoprotein IIIa - human (fragments) 35 3.0 CR786571_11(CR786571|pid:none) Zebrafish DNA sequence from clone... 35 3.0 Z69717_3(Z69717|pid:none) Caenorhabditis elegans Cosmid E01G6, c... 35 3.0 T20406(T20406)hypothetical protein E01G6.1 - Caenorhabditis eleg... 35 3.0 CU640366_77(CU640366|pid:none) Podospora anserina genomic DNA ch... 35 3.0 AF465787_1(AF465787|pid:none) Xenopus laevis Riddle 3 (Rdd3) mRN... 35 3.0 CP001078_926(CP001078|pid:none) Clostridium botulinum E3 str. Al... 35 3.0 AF374376_25(AF374376|pid:none) Oikopleura dioica clone BAC clone... 35 3.0 AB209448_1(AB209448|pid:none) Homo sapiens mRNA for nidogen (ena... 35 3.9 (P04275) RecName: Full=von Willebrand factor; Short=vWF... 35 3.9 AY892318_1(AY892318|pid:none) Synthetic construct Homo sapiens c... 35 3.9 BC005861_1(BC005861|pid:none) Homo sapiens integrin, beta 2 (com... 35 3.9 AK129157_1(AK129157|pid:none) Mus musculus premature mRNA for mK... 35 3.9 M10321_1(M10321|pid:none) Human von Willebrand factor mRNA, 3' e... 35 3.9 AK303488_1(AK303488|pid:none) Homo sapiens cDNA FLJ59807 complet... 35 3.9 AF340067_1(AF340067|pid:none) Pan troglodytes isolate Bonnie leu... 35 3.9 Y00057_1(Y00057|pid:none) Human mRNA for beta-subunit of cell su... 35 3.9 BC021077_1(BC021077|pid:none) Homo sapiens integrin, beta 2 (com... 35 3.9 AK297600_1(AK297600|pid:none) Homo sapiens cDNA FLJ59036 complet... 35 3.9 FJ389580_1(FJ389580|pid:none) Pinctada maxima metallothionein mR... 35 3.9 AK095992_1(AK095992|pid:none) Homo sapiens cDNA FLJ38673 fis, cl... 35 3.9 BC071284_1(BC071284|pid:none) Danio rerio tenascin W, mRNA (cDNA... 35 3.9 DQ867017_1(DQ867017|pid:none) Bos taurus integrin beta6 mRNA, co... 35 3.9 (A6QP35) RecName: Full=Keratin-associated protein 10-8; &BC1491... 35 3.9 CP000698_1368(CP000698|pid:none) Geobacter uraniireducens Rf4, c... 35 3.9 AJ628246_1(AJ628246|pid:none) Homo sapiens partial mRNA for kera... 35 3.9 (Q6L8H2) RecName: Full=Keratin-associated protein 5-3; AltName: ... 35 3.9 DQ482581_1(DQ482581|pid:none) Galleria mellonella lipophorin rec... 35 3.9 BX640593_6(BX640593|pid:none) Zebrafish DNA sequence from clone ... 35 3.9 AF036687_2(AF036687|pid:none) Caenorhabditis elegans cosmid C08G... 35 3.9 CP001270_26(CP001270|pid:none) Borrelia burgdorferi 156a plasmid... 35 3.9 T32497(T32497)hypothetical protein C08G9.2 - Caenorhabditis eleg... 35 3.9 EF601708_1(EF601708|pid:none) Gekko gecko beta-keratin 7 mRNA, c... 35 5.1 BC143738_1(BC143738|pid:none) Homo sapiens integrin, beta 4, mRN... 35 5.1 (P16144) RecName: Full=Integrin beta-4; AltName: Full=GP150; Alt... 35 5.1 A36429(S12380;S08465;A36429;S06963;B33534)integrin beta-4 chain ... 35 5.1 AF011375_1(AF011375|pid:none) Homo sapiens integrin variant beta... 35 5.1 BT059014_1(BT059014|pid:none) Salmo salar clone ssal-rgf-520-138... 35 5.1 BC126411_1(BC126411|pid:none) Homo sapiens integrin, beta 4, mRN... 35 5.1 BC099151_1(BC099151|pid:none) Rattus norvegicus integrin beta 2,... 35 5.1 EU623794_1(EU623794|pid:none) Odocoileus hemionus CD18 (CD18) mR... 35 5.1 AK304792_1(AK304792|pid:none) Homo sapiens cDNA FLJ60224 complet... 35 5.1 U66541_2(U66541|pid:none) Human beta4-integrin (ITGB4) and alter... 35 5.1 BC118916_1(BC118916|pid:none) Homo sapiens integrin, beta 4, mRN... 35 5.1 (A8MTY7) RecName: Full=Putative keratin-associated protein 9-2-l... 35 5.1 AF199482_1(AF199482|pid:none) Pacifastacus leniusculus metalloth... 35 5.1 X52186_1(X52186|pid:none) Human mRNA for integrin beta-4 subunit. 35 5.1 DQ149103_1(DQ149103|pid:none) Danio rerio integrin beta1 subunit... 35 5.1 X53587_1(X53587|pid:none) Human mRNA for integrin beta 4. 35 5.1 BC109238_1(BC109238|pid:none) Homo sapiens integrin, beta 4, mRN... 35 5.1 AE014134_2528(AE014134|pid:none) Drosophila melanogaster chromos... 35 5.1 AL590997_30(AL590997|pid:none) Mouse DNA sequence from clone RP2... 35 5.1 BC146386_1(BC146386|pid:none) Synthetic construct Homo sapiens c... 35 5.1 (O88799) RecName: Full=Zonadhesin; Flags: Precursor; &T42215(T4... 35 5.1 AK035019_1(AK035019|pid:none) Mus musculus 12 days embryo embryo... 35 5.1 AK039790_1(AK039790|pid:none) Mus musculus adult male spinal cor... 35 5.1 (Q16RY9) RecName: Full=Leucine-rich repeat-containing protein 50... 35 5.1 CP000825_617(CP000825|pid:none) Prochlorococcus marinus str. MIT... 35 5.1 BC051968_1(BC051968|pid:none) Mus musculus NEL-like 2 (chicken),... 35 5.1 BA000011_370(BA000011|pid:none) Thermoplasma volcanium GSS1 DNA,... 35 5.1 AC007378_1(AC007378|pid:none) Homo sapiens BAC clone RP11-78I14 ... 34 6.7 AF168681_1(AF168681|pid:none) Homo sapiens CRIM1 protein gene, p... 34 6.7 AY536890_1(AY536890|pid:none) Theromyzon rude cys-rich cocoon pr... 34 6.7 (Q9BYT5) RecName: Full=Keratin-associated protein 2-2; AltName: ... 34 6.7 U28971_1(U28971|pid:none) Caenorhabditis elegans cosmid B0244, c... 34 6.7 AB384861_1(AB384861|pid:none) Synthetic construct DNA, clone: pF... 34 6.7 (Q01643) RecName: Full=Male-specific sperm protein Mst84Db; &AE... 34 6.7 (Q3UV74) RecName: Full=Integrin beta-2-like protein; AltName: Fu... 34 6.7 (Q27591) RecName: Full=Integrin beta-nu; Flags: Precursor; &AE0... 34 6.7 B88465(B88465)protein B0244.8 [imported] - Caenorhabditis elegans 34 6.7 AF051367_1(AF051367|pid:none) Mus musculus pactolus mRNA, comple... 34 6.7 BC155681_1(BC155681|pid:none) Xenopus tropicalis hypothetical pr... 34 6.7 AX058612_1(AX058612|pid:none) Sequence 19 from Patent WO0075321.... 34 6.7 CP000251_2584(CP000251|pid:none) Anaeromyxobacter dehalogenans 2... 34 6.7 (Q9NZV1) RecName: Full=Cysteine-rich motor neuron 1 protein; ... 34 6.7 EU553918_1(EU553918|pid:none) Cervus elaphus canadensis CD18 (CD... 34 6.7 AJ508747_1(AJ508747|pid:none) Bos taurus mRNA for organic anion ... 34 6.7 BC113142_1(BC113142|pid:none) Mus musculus integrin beta 2-like,... 34 6.7 AL034557_45(AL034557|pid:none) Plasmodium falciparum MAL4P1. &A... 34 6.7 AL034559_20(AL034559|pid:none) Plasmodium falciparum MAL3P7, com... 34 6.7 (Q80V70) RecName: Full=Multiple epidermal growth factor-like dom... 34 8.7 CP001131_1246(CP001131|pid:none) Anaeromyxobacter sp. K, complet... 34 8.7 AM743083_1(AM743083|pid:none) Cyanagraea praedator Mt gene for m... 34 8.7 FJ554569_1(FJ554569|pid:none) Oryza sativa Japonica Group cultiv... 34 8.7 (P15269) RecName: Full=Spore coat protein SP70; AltName: Full=Pr... 34 8.7 AC116963_42(AC116963|pid:none) Dictyostelium discoideum chromoso... 34 8.8 AL844508_163(AL844508|pid:none) Plasmodium falciparum 3D7 chromo... 34 8.8 AB463075_1(AB463075|pid:none) Synthetic construct DNA, clone: pF... 34 8.8 AY428849_1(AY428849|pid:none) Microcebus murinus zonadhesin mRNA... 34 8.8 A37057(A37057;I69201)integrin beta-6 chain - human 34 8.8 BT045323_1(BT045323|pid:none) Salmo salar clone ssal-rgf-518-160... 34 8.8 AK304203_1(AK304203|pid:none) Homo sapiens cDNA FLJ54265 complet... 34 8.8 (P98164) RecName: Full=Low-density lipoprotein receptor-related ... 34 8.8 A26609_1(A26609|pid:none) Human integrin subunit Beta 6. 34 8.8 AC008178_1(AC008178|pid:none) Homo sapiens BAC clone RP11-551O2 ... 34 8.8 BC071021_1(BC071021|pid:none) Xenopus laevis hypothetical protei... 34 8.8 (Q9BYQ7) RecName: Full=Keratin-associated protein 4-1; AltName: ... 34 8.8 EU273942_1(EU273942|pid:none) Amphimedon queenslandica notch mRN... 28 9.8
>AC115592_21(AC115592|pid:none) Dictyostelium discoideum chromosome 2 map 1-125959 strain AX4, complete sequence. Length = 421
Score = 241 bits (614), Expect(2) = 4e-63 Identities = 100/101 (99%), Positives = 100/101 (99%) Frame = +3
Query: 621 CASKXVCDPTYQCPLLGCEPGYKAFTAPGECCASQCVCDPNYPCPLLGCGPGYIAYTPPG 800 CASK VCDPTYQCPLLGCEPGYKAFTAPGECCASQCVCDPNYPCPLLGCGPGYIAYTPPG Sbjct: 321 CASKCVCDPTYQCPLLGCEPGYKAFTAPGECCASQCVCDPNYPCPLLGCGPGYIAYTPPG 380
Query: 801 ECCANKCICDPNYQCPLLGCPPSTIEYTAPNACCPSKCVPV 923 ECCANKCICDPNYQCPLLGCPPSTIEYTAPNACCPSKCVPV Sbjct: 381 ECCANKCICDPNYQCPLLGCPPSTIEYTAPNACCPSKCVPV 421
Score = 25.0 bits (53), Expect(2) = 4e-63 Identities = 9/9 (100%), Positives = 9/9 (100%) Frame = +2
Query: 590 FIPYTEPGN 616 FIPYTEPGN Sbjct: 311 FIPYTEPGN 319
Score = 243 bits (619), Expect = 9e-63 Identities = 120/225 (53%), Positives = 133/225 (59%), Gaps = 34/225 (15%) Frame = +1
Query: 1 NFSQHLNYYSKTIIFFFNKXYKISF-FIFMVCLLLTKLNYKVFADSSSSNPTLPTNCXGV 177 N+ + +K I F ISF F+ C+ VFADSSSSNPTLPTNC GV Sbjct: 152 NYVDSIRKVTKFITFKLIIKNLISFLFVLTSCM-------SVFADSSSSNPTLPTNCNGV 204
Query: 178 ECPMTXVXGIGYKPHIXXXXXXXXXXXXXXXYQCPLLGCPPXTYYYTAPGDCCASKCVCN 357 ECPMT V GIGYKPHI YQCPLLGCPP TYYYTAPGDCCASKCVCN Sbjct: 205 ECPMTVVCGIGYKPHIPPGECCPTTCECDTTYQCPLLGCPPETYYYTAPGDCCASKCVCN 264
Query: 358 STYPCPLLGXGPGYTPYTQQGDCCP---------------------------------NK 438 STYPCPLLG GPGYTPYTQQGDCCP +K Sbjct: 265 STYPCPLLGCGPGYTPYTQQGDCCPSECIPDCNENQPCPILNCATSFIPYTEPGNCCASK 324
Query: 439 CVCDSSYQCPLLGCPPNTITYTKPGDCCPSECIPDCNENQPCPIL 573 CVCD +YQCPLLGC P +T PG+CC S+C+ C+ N PCP+L Sbjct: 325 CVCDPTYQCPLLGCEPGYKAFTAPGECCASQCV--CDPNYPCPLL 367
Score = 160 bits (405), Expect = 6e-38 Identities = 62/90 (68%), Positives = 72/90 (80%) Frame = +1
Query: 271 YQCPLLGCPPXTYYYTAPGDCCASKCVCNSTYPCPLLGXGPGYTPYTQQGDCCPNKCVCD 450 YQCPLLGC P +TAPG+CCAS+CVC+ YPCPLLG GPGY YT G+CC NKC+CD Sbjct: 331 YQCPLLGCEPGYKAFTAPGECCASQCVCDPNYPCPLLGCGPGYIAYTPPGECCANKCICD 390
Query: 451 SSYQCPLLGCPPNTITYTKPGDCCPSECIP 540 +YQCPLLGCPP+TI YT P CCPS+C+P Sbjct: 391 PNYQCPLLGCPPSTIEYTAPNACCPSKCVP 420
Score = 149 bits (377), Expect = 1e-34 Identities = 66/132 (50%), Positives = 75/132 (56%), Gaps = 33/132 (25%) Frame = +3
Query: 621 CASKXVCDPTYQCPLLGCEPGYKAFTAPGECCASQCVCDPNYPCPLLGCGPGY------- 779 C + CD TYQCPLLGC P +TAPG+CCAS+CVC+ YPCPLLGCGPGY Sbjct: 226 CPTTCECDTTYQCPLLGCPPETYYYTAPGDCCASKCVCNSTYPCPLLGCGPGYTPYTQQG 285
Query: 780 --------------------------IAYTPPGECCANKCICDPNYQCPLLGCPPSTIEY 881 I YT PG CCA+KC+CDP YQCPLLGC P + Sbjct: 286 DCCPSECIPDCNENQPCPILNCATSFIPYTEPGNCCASKCVCDPTYQCPLLGCEPGYKAF 345
Query: 882 TAPNACCPSKCV 917 TAP CC S+CV Sbjct: 346 TAPGECCASQCV 357
Score = 139 bits (349), Expect = 2e-31 Identities = 56/99 (56%), Positives = 69/99 (69%) Frame = +1
Query: 277 CPLLGCPPXTYYYTAPGDCCASKCVCNSTYPCPLLGXGPGYTPYTQQGDCCPNKCVCDSS 456 CP+L C YT PG+CCASKCVC+ TY CPLLG PGY +T G+CC ++CVCD + Sbjct: 302 CPILNCATSFIPYTEPGNCCASKCVCDPTYQCPLLGCEPGYKAFTAPGECCASQCVCDPN 361
Query: 457 YQCPLLGCPPNTITYTKPGDCCPSECIPDCNENQPCPIL 573 Y CPLLGC P I YT PG+CC ++CI C+ N CP+L Sbjct: 362 YPCPLLGCGPGYIAYTPPGECCANKCI--CDPNYQCPLL 398
Score = 122 bits (305), Expect = 2e-26 Identities = 58/129 (44%), Positives = 70/129 (54%), Gaps = 12/129 (9%) Frame = +3
Query: 570 FKLXHKXLYHILNQVIGC----ASKXVCDPTY-------QCPL-LGCEPGYKAFTAPGEC 713 FKL K L L + C A +PT +CP+ + C GYK PGEC Sbjct: 166 FKLIIKNLISFLFVLTSCMSVFADSSSSNPTLPTNCNGVECPMTVVCGIGYKPHIPPGEC 225
Query: 714 CASQCVCDPNYPCPLLGCGPGYIAYTPPGECCANKCICDPNYQCPLLGCPPSTIEYTAPN 893 C + C CD Y CPLLGC P YT PG+CCA+KC+C+ Y CPLLGC P YT Sbjct: 226 CPTTCECDTTYQCPLLGCPPETYYYTAPGDCCASKCVCNSTYPCPLLGCGPGYTPYTQQG 285
Query: 894 ACCPSKCVP 920 CCPS+C+P Sbjct: 286 DCCPSECIP 294
Score = 35.0 bits (79), Expect = 3.9 Identities = 20/67 (29%), Positives = 28/67 (41%), Gaps = 2/67 (2%) Frame = +1
Query: 403 PYTQQGDCCPNKCVCDSSYQCPLLGCPPNTITYTKPGDCCPSECIPDCNENQPCPILN-- 576 P G CP VC Y+ + PG+CCP+ C +C+ CP+L Sbjct: 198 PTNCNGVECPMTVVCGIGYK-----------PHIPPGECCPTTC--ECDTTYQCPLLGCP 244
Query: 577 XATXFYT 597 T +YT Sbjct: 245 PETYYYT 251
Lambda K H 0.318 0.134 0.401
Gapped Lambda K H 0.267 0.0410 0.140
Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 3236559 Number of Hits to DB: 1,539,869,490 Number of extensions: 34774719 Number of successful extensions: 101452 Number of sequences better than 10.0: 282 Number of HSP's gapped: 99570 Number of HSP's successfully gapped: 578 Length of query: 326 Length of database: 1,051,180,864 Length adjustment: 129 Effective length of query: 197 Effective length of database: 633,664,753 Effective search space: 124831956341 Effective search space used: 124831956341 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 32 (16.9 bits)
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