Contig-U14247-1
Contig ID Contig-U14247-1
Contig update 2002.12.18
Contig sequence
>Contig-U14247-1 (Contig-U14247-1Q) /CSM_Contig/Contig-U14247-1Q.Seq.d
NNNNNNNNNNGGAACATTTGCAAATCTATCATTGGATTGTATCCTAAGGG
TATTGAGTGCAGTATTATTAGAACAAAGGGTTGTTTTTGTATGTGATAAT
TTATCAATACTATCATCATGTTGTTTCTCAATGATATCATTAATACATCC
ATTAAAATGGCAAGGTTTATTCGTACCAATTTTACCACAAAATCTTTTAG
ATTATCTTGAAGCACCTGTACCTTTTATTGTTGGTGTTTCTCATATTAAT
AGAAGAAATTTCGATGGTTTAATAGTTGATATAAAATCAAATAAAATAAC
TTATAATCGTTGTTCACAACCACCAATTATTCCAGAATTTAATAAATTAT
TAAATAATTTAAAAAATGATACAAATACATTAATTAATCAAAAGAATTAT
AATCCAGTAAAGAATACAAATCAACAAAATGAATCAGTTCATAGAATTTA
TTCAACCATTCAACAATATACATTATGGTTATTTAAAAAGATTGAAATTC
AATTTATTACAGTTAATGTTTTCGATAGTTTAGAAATCGAGGATTTTAAA
AAGAAATTCCTATCAACTGTATCCGATCATAATAAAGAATTTATTAAAAT
GTCTTTNGGAGACTCAACATTTCTCTCATTGCCTTCATCATAATCGTATT
AATANGACCAACAAGAAAGCAGAAGAATTAGAAACAANTNACAACTAATT
GAAAATCAAGCACAAATTANAATTCACNCACATCTAATCGCCAACAACAA

Gap no gap
Contig length 750
Chromosome number (1..6, M) 1
Chromosome length 4919822
Start point 1180813
End point 1181451
Strand (PLUS/MINUS) PLUS
Number of clones 1
Number of EST 1
Link to clone list U14247
List of clone(s)

est1=CHB254Z,1,741
Translated Amino Acid sequence
XXXGTFANLSLDCILRVLSAVLLEQRVVFVCDNLSILSSCCFSMISLIHPLKWQGLFVPI
LPQNLLDYLEAPVPFIVGVSHINRRNFDGLIVDIKSNKITYNRCSQPPIIPEFNKLLNNL
KNDTNTLINQKNYNPVKNTNQQNESVHRIYSTIQQYTLWLFKKIEIQFITVNVFDSLEIE
DFKKKFLSTVSDHNKEFIKMSXGDSTFLSLPSS*sy*xdqqesrrirnxxqlienqaqix
ihxhliann


Translated Amino Acid sequence (All Frames)
Frame A:
xxxxnicksiiglypkgiecsiirtkgcfcm**fintiimlflndiintsikmarfirtn
fttksfrls*stctfycwcfsy**kkfrwfns*ykik*nnl*slftttnysri**iik*f
kk*ykyin*skel*sskeykstk*iss*nlfnhstiyimvi*kd*nsiyys*cfr*frnr
gf*keipincirs**riy*nvfxrlnisliafiiivlixptrkqkn*kqxttn*ksstnx
nsxtsnrqqq


Frame B:
XXXGTFANLSLDCILRVLSAVLLEQRVVFVCDNLSILSSCCFSMISLIHPLKWQGLFVPI
LPQNLLDYLEAPVPFIVGVSHINRRNFDGLIVDIKSNKITYNRCSQPPIIPEFNKLLNNL
KNDTNTLINQKNYNPVKNTNQQNESVHRIYSTIQQYTLWLFKKIEIQFITVNVFDSLEIE
DFKKKFLSTVSDHNKEFIKMSXGDSTFLSLPSS*sy*xdqqesrrirnxxqlienqaqix
ihxhliann


Frame C:
xxxehlqiyhwivs*gy*vqyy*nkglflyviiyqyyhhvvsq*yh*yih*ngkvysyqf
yhkif*iilkhlyllllvflilieeismv**li*nqik*liivvhnhqlfqnliny*ii*
kmiqih*likriiiq*riqinkmnqfiefiqpfnnihygylkrlkfnllqlmfsiv*ksr
ilkrnsyqlypiiiknllkclxetqhfshclhhnrinxtnkkaeeletxxn*lkikhklx
fthi*sptt


own update 2004. 6.10
Homology vs CSM-cDNA
Query= Contig-U14247-1 (Contig-U14247-1Q)
/CSM_Contig/Contig-U14247-1Q.Seq.d
(750 letters)

Database: CSM
6905 sequences; 5,674,871 total letters


Score E
Sequences producing significant alignments: (bits) Value

Contig-U14247-1 (Contig-U14247-1Q) /CSM_Contig/Conti... 1431 0.0
Contig-U11654-1 (Contig-U11654-1Q) /CSM_Contig/Conti... 52 9e-07
Contig-U01940-1 (Contig-U01940-1Q) /CSM_Contig/Conti... 42 9e-04
Contig-U12384-1 (Contig-U12384-1Q) /CSM_Contig/Conti... 40 0.003
Contig-U08277-1 (Contig-U08277-1Q) /CSM_Contig/Conti... 40 0.003
Contig-U13134-1 (Contig-U13134-1Q) /CSM_Contig/Conti... 38 0.013
Contig-U11388-1 (Contig-U11388-1Q) /CSM_Contig/Conti... 38 0.013
Contig-U11294-1 (Contig-U11294-1Q) /CSM_Contig/Conti... 38 0.013
Contig-U04959-1 (Contig-U04959-1Q) /CSM_Contig/Conti... 38 0.013
Contig-U02000-1 (Contig-U02000-1Q) /CSM_Contig/Conti... 38 0.013

>Contig-U14247-1 (Contig-U14247-1Q) /CSM_Contig/Contig-U14247-1Q.Seq.d
Length = 750

Score = 1431 bits (722), Expect = 0.0
Identities = 740/740 (100%)
Strand = Plus / Plus


Query: 11 ggaacatttgcaaatctatcattggattgtatcctaagggtattgagtgcagtattatta 70
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11 ggaacatttgcaaatctatcattggattgtatcctaagggtattgagtgcagtattatta 70


Query: 71 gaacaaagggttgtttttgtatgtgataatttatcaatactatcatcatgttgtttctca 130
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 71 gaacaaagggttgtttttgtatgtgataatttatcaatactatcatcatgttgtttctca 130


Query: 131 atgatatcattaatacatccattaaaatggcaaggtttattcgtaccaattttaccacaa 190
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 131 atgatatcattaatacatccattaaaatggcaaggtttattcgtaccaattttaccacaa 190


Query: 191 aatcttttagattatcttgaagcacctgtaccttttattgttggtgtttctcatattaat 250
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 191 aatcttttagattatcttgaagcacctgtaccttttattgttggtgtttctcatattaat 250


Query: 251 agaagaaatttcgatggtttaatagttgatataaaatcaaataaaataacttataatcgt 310
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 251 agaagaaatttcgatggtttaatagttgatataaaatcaaataaaataacttataatcgt 310


Query: 311 tgttcacaaccaccaattattccagaatttaataaattattaaataatttaaaaaatgat 370
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 311 tgttcacaaccaccaattattccagaatttaataaattattaaataatttaaaaaatgat 370


Query: 371 acaaatacattaattaatcaaaagaattataatccagtaaagaatacaaatcaacaaaat 430
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 371 acaaatacattaattaatcaaaagaattataatccagtaaagaatacaaatcaacaaaat 430


Query: 431 gaatcagttcatagaatttattcaaccattcaacaatatacattatggttatttaaaaag 490
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 431 gaatcagttcatagaatttattcaaccattcaacaatatacattatggttatttaaaaag 490


Query: 491 attgaaattcaatttattacagttaatgttttcgatagtttagaaatcgaggattttaaa 550
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 491 attgaaattcaatttattacagttaatgttttcgatagtttagaaatcgaggattttaaa 550


Query: 551 aagaaattcctatcaactgtatccgatcataataaagaatttattaaaatgtctttngga 610
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 551 aagaaattcctatcaactgtatccgatcataataaagaatttattaaaatgtctttngga 610


Query: 611 gactcaacatttctctcattgccttcatcataatcgtattaatangaccaacaagaaagc 670
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 611 gactcaacatttctctcattgccttcatcataatcgtattaatangaccaacaagaaagc 670


Query: 671 agaagaattagaaacaantnacaactaattgaaaatcaagcacaaattanaattcacnca 730
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 671 agaagaattagaaacaantnacaactaattgaaaatcaagcacaaattanaattcacnca 730


Query: 731 catctaatcgccaacaacaa 750
||||||||||||||||||||
Sbjct: 731 catctaatcgccaacaacaa 750


>Contig-U11654-1 (Contig-U11654-1Q) /CSM_Contig/Contig-U11654-1Q.Seq.d
Length = 321

Score = 52.0 bits (26), Expect = 9e-07
Identities = 63/71 (88%), Gaps = 4/71 (5%)
Strand = Plus / Plus


Query: 612 actcaacatttct-ctcattgccttcatcataatcgtattaatangaccaacaagaaagc 670
||||||||||||| |||||| |||||||||||||| |||||||| | | |||||||||
Sbjct: 237 actcaacatttctgctcatttccttcatcataatc-tattaataa-ancnacaagaaag- 293


Query: 671 agaagaattag 681
|||||||||||
Sbjct: 294 agaagaattag 304


>Contig-U01940-1 (Contig-U01940-1Q) /CSM_Contig/Contig-U01940-1Q.Seq.d
Length = 674

Score = 42.1 bits (21), Expect = 9e-04
Identities = 24/25 (96%)
Strand = Plus / Plus


Query: 343 taaattattaaataatttaaaaaat 367
|||||||||||||||| ||||||||
Sbjct: 505 taaattattaaataatataaaaaat 529


Database: CSM
Posted date: Jun 9, 2004 7:35 PM
Number of letters in database: 5,674,871
Number of sequences in database: 6905

Lambda K H
1.37 0.711 1.31

Gapped
Lambda K H
1.37 0.711 1.31


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 18,005
Number of Sequences: 6905
Number of extensions: 18005
Number of successful extensions: 2792
Number of sequences better than 10.0: 470
length of query: 750
length of database: 5,674,871
effective HSP length: 16
effective length of query: 734
effective length of database: 5,564,391
effective search space: 4084262994
effective search space used: 4084262994
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 15 (30.2 bits)
dna update 2008.12.20
Homology vs DNA
Query= Contig-U14247-1 (Contig-U14247-1Q) /CSM_Contig/Contig-U14247-1Q.Seq.d
(750 letters)

Database: ddbj_A
92,845,959 sequences; 95,242,211,685 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value N

(BJ377457) Dictyostelium discoideum cDNA clone:ddc24k14, 3' ... 652 0.0 2
(AC231213) Choloepus hoffmanni clone CH281-153A2, WORKING DR... 40 0.018 5
(AF003138) Caenorhabditis elegans cosmid F12B6, complete seq... 40 0.037 3
(AC115598) Dictyostelium discoideum chromosome 2 map 581427-... 38 0.13 6
(AC115612) Dictyostelium discoideum chromosome 2 map 6245135... 48 0.48 1
(AC176947) Strongylocentrotus purpuratus clone R3-34B06, WOR... 48 0.48 1
(CZ293197) cp99h06.r Candida parapsilosis Random Genomic Lib... 48 0.48 1
(CZ287343) cp52a06.f Candida parapsilosis Random Genomic Lib... 48 0.48 1
(CZ280682) cp12g09.f Candida parapsilosis Random Genomic Lib... 48 0.48 1
(CT126189) Sus scrofa genomic clone PigE-187D4, genomic surv... 48 0.48 1
(AM053813) Eudiplodinium maggii EST, clone Em07_C04. 48 0.48 1
(AC151077) Bos taurus clone CH240-191O10, WORKING DRAFT SEQU... 36 0.98 2
(AC151193) Bos taurus clone CH240-136K18, *** SEQUENCING IN ... 36 0.98 2
(BZ388235) EINAS71TR EI_10_12_KB Entamoeba invadens genomic ... 38 1.3 2
(AC116330) Dictyostelium discoideum chromosome 2 map 3191214... 40 1.4 5
(EK098780) 1092962061072 Global-Ocean-Sampling_GS-31-01-01-1... 36 1.5 3
(BV376896) S231P611RH10.T0 BedlingtonTerrier Canis familiari... 46 1.9 1
(AX345923) Sequence 994 from Patent WO0200928. 46 1.9 1
(AC162706) Bos taurus clone CH240-116H19, WORKING DRAFT SEQU... 46 1.9 1
(AC161396) Bos taurus clone CH240-69P7, WORKING DRAFT SEQUEN... 46 1.9 1
(AC223385) Bos taurus clone CH240-420J15, WORKING DRAFT SEQU... 46 1.9 1
(AC185722) Bos taurus clone RP42-269L1, WORKING DRAFT SEQUEN... 46 1.9 1
(AC185721) Bos taurus clone RP42-268N1, WORKING DRAFT SEQUEN... 46 1.9 1
(AC163126) Bos taurus clone CH240-126J22, WORKING DRAFT SEQU... 46 1.9 1
(CR956578) Equus caballus GSS, BAC clone CH241-110G2, T7 end... 46 1.9 1
(CC534449) CH240_412F24.T7 CHORI-240 Bos taurus genomic clon... 46 1.9 1
(DR034499) 17176.2 Swollen Stolon Solanum tuberosum cDNA clo... 46 1.9 1
(CK717350) 17176 Swollen Stolon Solanum tuberosum cDNA, mRNA... 46 1.9 1
(FG078722) UI-FF-IH0-aao-m-22-0-UI.r1 Ceratitis capitata adu... 46 1.9 1
(CR382399) Plasmodium falciparum chromosome 6, complete sequ... 34 2.2 7
(AC006751) Caenorhabditis elegans clone Y39G10, *** SEQUENCI... 40 2.8 6
(AC034296) Homo sapiens chromosome 13 clone RP11-438I6 map 1... 44 2.9 3
(CQ869999) Sequence 420 from Patent WO2004074320. 34 3.5 2
(EF444987) Homo sapiens immunoglobulin superfamily, member 4... 34 3.5 2
(AC231319) Choloepus hoffmanni clone CH281-702O10, WORKING D... 40 3.5 3
(AC200590) Rhesus Macaque BAC CH250-308E4 () complete seque... 34 3.6 2
(AB017654) Homo sapiens genomic DNA, chromosome 11q23.2, clo... 34 3.6 2
(AP003167) Homo sapiens genomic DNA, chromosome 11q clone:RP... 34 3.7 2
(AC051650) Homo sapiens chromosome 11 clone RP11-243C19 map ... 34 3.7 2
(AP000462) Homo sapiens genomic DNA, chromosome 11q clone:B4... 34 3.7 2
(DC041942) Xenopus laevis NBRP cDNA clone:xlk119o14ex, 5' end. 38 4.1 2
(EJ267316) 1095351023714 Global-Ocean-Sampling_GS-27-01-01-1... 36 4.4 2
(AM466205) Vitis vinifera, whole genome shotgun sequence, co... 36 4.7 4
(AC166315) Medicago truncatula chromosome 7 BAC clone mth2-5... 40 5.0 3
(BI502181) kt86d03.y1 Strongyloides ratti L2 pAMP1 v1 Chiape... 32 5.0 2
(AC091885) Homo sapiens chromosome 5 clone RP11-116O11, comp... 36 6.1 7
(AC176329) Strongylocentrotus purpuratus clone R3-3012D18, W... 38 6.7 6
(BF336074) QV4-CT0491-100800-347-h11 CT0491 Homo sapiens cDN... 38 6.7 2
(CU571359) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 40 7.1 5
(EK379723) 1095469455867 Global-Ocean-Sampling_GS-31-01-01-1... 34 7.4 3
(CU468254) Zebrafish DNA sequence from clone CH73-374J3 in l... 44 7.5 1
(BX322555) Zebrafish DNA sequence from clone DKEY-19D21 in l... 44 7.5 1
(BV440136) S237P6107RD7.T0 PortugueseWaterDog Canis familiar... 44 7.5 1
(AC158364) Mus musculus BAC clone RP23-187J8 from chromosome... 44 7.5 1
(AC125207) Mus musculus BAC clone RP23-220C16 from 8, comple... 44 7.5 1
(AC159651) Pan troglodytes BAC clone CH251-495E21 from chrom... 44 7.5 1
(AC159464) Pan troglodytes BAC clone CH251-505P8 from chromo... 44 7.5 1
(EU081054) Carlowrightia torreyana trnS-trnG intergenic spac... 44 7.5 1
(EU081053) Carlowrightia texana trnS-trnG intergenic spacer,... 44 7.5 1
(EU081052) Carlowrightia serpyllifolia trnS-trnG intergenic ... 44 7.5 1
(CU633895) Podospora anserina genomic DNA chromosome 4, supe... 44 7.5 1
(DD010735) Diagnosis of known genetic Parameters within the ... 44 7.5 1
(AX344561) Sequence 12 from Patent WO0200932. 44 7.5 1
(AC087423) Sus scrofa clone RP44-55G2, complete sequence. 44 7.5 1
(EU220112) Solenopsis invicta isolate LP-745/a putative odor... 44 7.5 1
(AL359436) Human DNA sequence from clone RP11-513N16 on chro... 44 7.5 1
(AL139189) Human DNA sequence from clone RP11-94F16 on chrom... 44 7.5 1
(AC006484) Homo sapiens chromosome 5, clone hRPK.448_K_10, c... 44 7.5 1
(AC160420) Bos taurus clone CH240-82O23, WORKING DRAFT SEQUE... 44 7.5 1
(AC156959) Bos taurus clone CH240-71A10, WORKING DRAFT SEQUE... 44 7.5 1
(AC153457) Bos taurus clone CH240-17M12, WORKING DRAFT SEQUE... 44 7.5 1
(AC133236) Rattus norvegicus clone CH230-284B10, *** SEQUENC... 44 7.5 1
(AC109428) Rattus norvegicus clone CH230-286I21, WORKING DRA... 44 7.5 1
(CU633583) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 44 7.5 1
(AC079421) Mus musculus chromosome 16 clone RP23-105J18, WOR... 44 7.5 1
(AL354684) Human DNA sequence *** SEQUENCING CANCELLED *** f... 44 7.5 1
(AC219534) Bos taurus clone CH240-330D2, WORKING DRAFT SEQUE... 44 7.5 1
(AC182929) Bos taurus clone CH240-273P14, WORKING DRAFT SEQU... 44 7.5 1
(AC166460) Bos taurus clone CH240-176C6, WORKING DRAFT SEQUE... 44 7.5 1
(EK564264) 1095521033062 Global-Ocean-Sampling_GS-32-01-01-1... 44 7.5 1
(EK529846) 1095516004743 Global-Ocean-Sampling_GS-32-01-01-1... 44 7.5 1
(AM639772) Entamoeba dispar GSS, clone dispar69b10.q1k. 44 7.5 1
(EJ273641) 1095366003828 Global-Ocean-Sampling_GS-27-01-01-1... 44 7.5 1
(EJ151090) 1092343762510 Global-Ocean-Sampling_GS-27-01-01-1... 44 7.5 1
(ED626208) GM_WBa0024A23.r GM_WBa Glycine max genomic clone ... 44 7.5 1
(DU105350) JBnY024D24F Brassica napus BAC library JBnY Brass... 44 7.5 1
(CE782150) tigr-gss-dog-17000330661258 Dog Library Canis lup... 44 7.5 1
(CE253961) tigr-gss-dog-17000336272378 Dog Library Canis lup... 44 7.5 1
(ES277403) AJAG-aaa17c09.g1 Aph cDNA-InfSeedling Aphanomyces... 44 7.5 1
(DW259223) UI-S-GG1-aaz-l-24-0-UI.s1 UI-S-GG1 Euprymna scolo... 44 7.5 1
(AU294023) Zinnia elegans cDNA, clone:Z8785, primer:M13 forw... 44 7.5 1
(DN200454) USDA-FP_138518 Citrus root weevil whole body adul... 44 7.5 1
(CA072445) SCEPAM1016C04.g AM1 Saccharum officinarum cDNA cl... 44 7.5 1
(BE820647) GM700012B20H3 Gm-r1070 Glycine max cDNA clone Gm-... 44 7.5 1
(FC832682) CBHI4654.fwd CBHI Metridium senile tentacle Metri... 44 7.5 1
(EV272761) GLMBN74TF JCVI-SOY2 Glycine max cDNA 5', mRNA seq... 44 7.5 1
(CP000111) Prochlorococcus marinus str. MIT 9312, complete g... 44 7.5 1
(AY770626) Mycoplasma pullorum 16S ribosomal RNA gene, parti... 44 7.5 1
(D31785) Pichia canadensis mitochondrial genomic DNA, comple... 42 8.1 2
(AL359265) Human DNA sequence from clone RP11-195C7 on chrom... 38 9.8 4

>(BJ377457) Dictyostelium discoideum cDNA clone:ddc24k14, 3' end,
single read.
Length = 741

Score = 652 bits (329), Expect(2) = 0.0
Identities = 347/347 (100%)
Strand = Plus / Minus


Query: 404 ccagtaaagaatacaaatcaacaaaatgaatcagttcatagaatttattcaaccattcaa 463
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 348 ccagtaaagaatacaaatcaacaaaatgaatcagttcatagaatttattcaaccattcaa 289


Query: 464 caatatacattatggttatttaaaaagattgaaattcaatttattacagttaatgttttc 523
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 288 caatatacattatggttatttaaaaagattgaaattcaatttattacagttaatgttttc 229


Query: 524 gatagtttagaaatcgaggattttaaaaagaaattcctatcaactgtatccgatcataat 583
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 228 gatagtttagaaatcgaggattttaaaaagaaattcctatcaactgtatccgatcataat 169


Query: 584 aaagaatttattaaaatgtctttnggagactcaacatttctctcattgccttcatcataa 643
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 168 aaagaatttattaaaatgtctttnggagactcaacatttctctcattgccttcatcataa 109


Query: 644 tcgtattaatangaccaacaagaaagcagaagaattagaaacaantnacaactaattgaa 703
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 108 tcgtattaatangaccaacaagaaagcagaagaattagaaacaantnacaactaattgaa 49


Query: 704 aatcaagcacaaattanaattcacncacatctaatcgccaacaacaa 750
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 48 aatcaagcacaaattanaattcacncacatctaatcgccaacaacaa 2

Score = 618 bits (312), Expect(2) = 0.0
Identities = 312/312 (100%)
Strand = Plus / Minus


Query: 13 aacatttgcaaatctatcattggattgtatcctaagggtattgagtgcagtattattaga 72
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 739 aacatttgcaaatctatcattggattgtatcctaagggtattgagtgcagtattattaga 680


Query: 73 acaaagggttgtttttgtatgtgataatttatcaatactatcatcatgttgtttctcaat 132
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 679 acaaagggttgtttttgtatgtgataatttatcaatactatcatcatgttgtttctcaat 620


Query: 133 gatatcattaatacatccattaaaatggcaaggtttattcgtaccaattttaccacaaaa 192
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 619 gatatcattaatacatccattaaaatggcaaggtttattcgtaccaattttaccacaaaa 560


Query: 193 tcttttagattatcttgaagcacctgtaccttttattgttggtgtttctcatattaatag 252
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 559 tcttttagattatcttgaagcacctgtaccttttattgttggtgtttctcatattaatag 500


Query: 253 aagaaatttcgatggtttaatagttgatataaaatcaaataaaataacttataatcgttg 312
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 499 aagaaatttcgatggtttaatagttgatataaaatcaaataaaataacttataatcgttg 440


Query: 313 ttcacaaccacc 324
||||||||||||
Sbjct: 439 ttcacaaccacc 428

Lambda K H
1.37 0.711 1.31

Matrix: blastn matrix:1 -3
Number of Sequences: 92845959
Number of Hits to DB: 849,967,822
Number of extensions: 54942692
Number of successful extensions: 4823184
Number of sequences better than 10.0: 101
Length of query: 750
Length of database: 95,242,211,685
Length adjustment: 24
Effective length of query: 726
Effective length of database: 97,308,875,965
Effective search space: 70646243950590
Effective search space used: 70646243950590
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)

protein update 2009. 7.10
Homology vs Protein
Query= Contig-U14247-1 (Contig-U14247-1Q) /CSM_Contig/Contig-U14247-1Q.Seq.d
(750 letters)

Database: nrp_B
3,236,559 sequences; 1,051,180,864 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value

AK067308_1(AK067308|pid:none) Oryza sativa Japonica Group cDNA c... 88 3e-16
AM443008_3(AM443008|pid:none) Vitis vinifera contig VV78X166267.... 87 4e-16
AY093021_1(AY093021|pid:none) Arabidopsis thaliana unknown prote... 86 1e-15
BT037091_1(BT037091|pid:none) Zea mays full-length cDNA clone ZM... 83 8e-15
CR954217_258(CR954217|pid:none) Ostreococcus tauri strain OTTH05... 83 1e-14
BT087821_1(BT087821|pid:none) Zea mays full-length cDNA clone ZM... 82 1e-14
CP000596_251(CP000596|pid:none) Ostreococcus lucimarinus CCE9901... 82 2e-14
AB384168_1(AB384168|pid:none) Synthetic construct DNA, clone: pF... 81 4e-14
BC049193_1(BC049193|pid:none) Homo sapiens DENN/MADD domain cont... 81 4e-14
BC123934_1(BC123934|pid:none) Xenopus tropicalis hypothetical pr... 80 5e-14
BC145599_1(BC145599|pid:none) Mus musculus DENN/MADD domain cont... 80 5e-14
AK135781_1(AK135781|pid:none) Mus musculus in vitro fertilized e... 80 5e-14
BC168024_1(BC168024|pid:none) Xenopus tropicalis cDNA clone MGC:... 79 1e-13
AK293245_1(AK293245|pid:none) Homo sapiens cDNA FLJ55510 complet... 79 2e-13
BC140494_1(BC140494|pid:none) Bos taurus suppression of tumorige... 79 2e-13
AB384990_1(AB384990|pid:none) Synthetic construct DNA, clone: pF... 79 2e-13
BC030391_1(BC030391|pid:none) Mus musculus suppression of tumori... 79 2e-13
U15131_1(U15131|pid:none) Human p126 (ST5) mRNA, complete cds. 79 2e-13
BC076471_1(BC076471|pid:none) Danio rerio suppression of tumorig... 79 2e-13
AK127763_1(AK127763|pid:none) Homo sapiens cDNA FLJ45864 fis, cl... 79 2e-13
BX323591_7(BX323591|pid:none) Zebrafish DNA sequence from clone ... 79 2e-13
AJ307670_2(AJ307670|pid:none) Mus musculus St5 gene, L27a gene a... 79 2e-13
AB193558_1(AB193558|pid:none) Danio rerio fc11b09 mRNA for fc11b... 79 2e-13
AK312758_1(AK312758|pid:none) Homo sapiens cDNA, FLJ93168, Homo ... 79 2e-13
(P78524) RecName: Full=Suppression of tumorigenicity 5; AltName:... 79 2e-13
BC032266_1(BC032266|pid:none) Mus musculus suppression of tumori... 79 2e-13
BX321886_7(BX321886|pid:none) Zebrafish DNA sequence from clone ... 77 8e-13
CR749576_1(CR749576|pid:none) Homo sapiens mRNA; cDNA DKFZp686N1... 75 2e-12
EU832032_1(EU832032|pid:none) Synthetic construct Homo sapiens c... 75 2e-12
BC076860_1(BC076860|pid:none) Xenopus laevis MGC84588 protein, m... 74 4e-12
AL133382_1(AL133382|pid:none) Human DNA sequence from clone RP5-... 74 5e-12
(Q68D51) RecName: Full=DENN domain-containing protein 2C; &AL13... 74 5e-12
(Q6P9P8) RecName: Full=DENN domain-containing protein 2C; &BC06... 72 1e-11
BC161647_1(BC161647|pid:none) Xenopus tropicalis hypothetical pr... 72 2e-11
AK137637_1(AK137637|pid:none) Mus musculus adult female vagina c... 72 2e-11
BC066182_1(BC066182|pid:none) Mus musculus DENN/MADD domain cont... 71 4e-11
CU638743_498(CU638743|pid:none) Podospora anserina genomic DNA c... 70 7e-11
BC027786_1(BC027786|pid:none) Mus musculus DENN/MADD domain cont... 69 1e-10
BC009616_1(BC009616|pid:none) Homo sapiens DENN/MADD domain cont... 69 1e-10
BC023016_1(BC023016|pid:none) Mus musculus DENN/MADD domain cont... 69 1e-10
AL390189_17(AL390189|pid:none) Neurospora crassa DNA linkage gro... 69 1e-10
AK295710_1(AK295710|pid:none) Homo sapiens cDNA FLJ50169 complet... 69 1e-10
BC028061_1(BC028061|pid:none) Homo sapiens DENN/MADD domain cont... 69 1e-10
AL161790_2(AL161790|pid:none) Human DNA sequence from clone RP11... 69 1e-10
AK074151_1(AK074151|pid:none) Homo sapiens mRNA for FLJ00224 pro... 69 1e-10
AK173046_1(AK173046|pid:none) Mus musculus mRNA for mKIAA0870 pr... 69 2e-10
BC078047_1(BC078047|pid:none) Xenopus laevis hypothetical protei... 69 2e-10
BX248111_6(BX248111|pid:none) Zebrafish DNA sequence from clone ... 69 2e-10
AK297959_1(AK297959|pid:none) Homo sapiens cDNA FLJ54496 complet... 69 2e-10
CR749672_1(CR749672|pid:none) Homo sapiens mRNA; cDNA DKFZp761D0... 68 3e-10
AB209682_1(AB209682|pid:none) Homo sapiens mRNA for SET binding ... 68 3e-10
AK129485_1(AK129485|pid:none) Mus musculus mRNA for mKIAA3020 pr... 68 3e-10
AJ851585_1(AJ851585|pid:none) Gallus gallus mRNA for hypothetica... 68 3e-10
BC157935_1(BC157935|pid:none) Mus musculus SET binding factor 1,... 68 3e-10
BC158013_1(BC158013|pid:none) Mus musculus SET binding factor 1,... 68 3e-10
(Q6ZPE2) RecName: Full=Myotubularin-related protein 5; AltName: ... 68 3e-10
BC168698_1(BC168698|pid:none) Rattus norvegicus similar to SET b... 68 4e-10
BC067204_1(BC067204|pid:none) Mus musculus SET binding factor 2,... 68 4e-10
AK080952_1(AK080952|pid:none) Mus musculus 4 days neonate male a... 68 4e-10
BC048706_1(BC048706|pid:none) Mus musculus SET binding factor 2,... 68 4e-10
CR954213_247(CR954213|pid:none) Ostreococcus tauri strain OTTH05... 67 5e-10
BC085532_1(BC085532|pid:none) Danio rerio zgc:103487, mRNA (cDNA... 67 5e-10
(Q68F67) RecName: Full=DENN domain-containing protein 1A; AltNam... 67 5e-10
AL831839_1(AL831839|pid:none) Homo sapiens mRNA; cDNA DKFZp547O0... 67 5e-10
(Q3U1T9) RecName: Full=DENN domain-containing protein 1B; 67 5e-10
AJ851460_1(AJ851460|pid:none) Gallus gallus mRNA for hypothetica... 67 5e-10
AL139136_5(AL139136|pid:none) Human DNA sequence from clone RP11... 67 5e-10
BC101466_1(BC101466|pid:none) Homo sapiens SET binding factor 2,... 67 6e-10
BC128615_1(BC128615|pid:none) Xenopus tropicalis hypothetical pr... 67 6e-10
CR954201_46(CR954201|pid:none) Ostreococcus tauri strain OTTH059... 67 6e-10
AB051553_1(AB051553|pid:none) Homo sapiens mRNA for KIAA1766 pro... 67 6e-10
BC120139_1(BC120139|pid:none) Bos taurus DENN/MADD domain contai... 67 8e-10
CU469314_3(CU469314|pid:none) Zebrafish DNA sequence from clone ... 66 1e-09
AM920437_1730(AM920437|pid:none) Penicillium chrysogenum Wiscons... 66 1e-09
BC124709_1(BC124709|pid:none) Danio rerio zgc:153628, mRNA (cDNA... 66 1e-09
AK173257_1(AK173257|pid:none) Mus musculus mRNA for mKIAA1766 pr... 65 2e-09
AM430340_1(AM430340|pid:none) Vitis vinifera contig VV78X088660.... 65 2e-09
AE013599_811(AE013599|pid:none) Drosophila melanogaster chromoso... 65 2e-09
AK303226_1(AK303226|pid:none) Homo sapiens cDNA FLJ53259 complet... 65 3e-09
(Q9H6A0) RecName: Full=DENN domain-containing protein 2D; &AL35... 65 3e-09
AL355816_3(AL355816|pid:none) Human DNA sequence from clone RP5-... 65 3e-09
FN357510_2(FN357510|pid:none) Schistosoma mansoni genome sequenc... 65 3e-09
AK026410_1(AK026410|pid:none) Homo sapiens cDNA: FLJ22757 fis, c... 65 3e-09
CP001142_284(CP001142|pid:none) Phaeodactylum tricornutum CCAP 1... 64 4e-09
CP000081_292(CP000081|pid:none) Leishmania major chromosome 35, ... 64 5e-09
BC133023_1(BC133023|pid:none) Homo sapiens DENN/MADD domain cont... 64 5e-09
AB020677_1(AB020677|pid:none) Homo sapiens mRNA for KIAA0870 pro... 64 5e-09
AK157279_1(AK157279|pid:none) Mus musculus activated spleen cDNA... 64 7e-09
(Q91VV4) RecName: Full=DENN domain-containing protein 2D; &BC00... 64 7e-09
AL032624_3(AL032624|pid:none) Caenorhabditis elegans YAC Y49A10A... 64 7e-09
T15824(T15824)hypothetical protein C52E12.4 - Caenorhabditis ele... 63 9e-09
AM502253_303(AM502253|pid:none) Leishmania infantum chromosome 35. 63 9e-09
U50135_4(U50135|pid:none) Caenorhabditis elegans cosmid C52E12, ... 63 9e-09
BC158880_1(BC158880|pid:none) Rattus norvegicus DENN/MADD domain... 62 2e-08
AY082605_1(AY082605|pid:none) Arabidopsis thaliana stomatal cyto... 62 3e-08
BC151194_1(BC151194|pid:none) Mus musculus DENN/MADD domain cont... 60 6e-08
(Q3U1Y4) RecName: Full=DENN domain-containing protein 4B; AltNam... 60 6e-08
BC066102_1(BC066102|pid:none) Mus musculus DENN/MADD domain cont... 60 6e-08
(Q6ZUT9) RecName: Full=DENN domain-containing protein 5B; AltNam... 60 7e-08
AY512564_1(AY512564|pid:none) Mus musculus brain specific protei... 60 7e-08
AJ719982_1(AJ719982|pid:none) Gallus gallus mRNA for hypothetica... 60 7e-08
BC020855_1(BC020855|pid:none) Homo sapiens DENN/MADD domain cont... 60 7e-08
AK123642_1(AK123642|pid:none) Homo sapiens cDNA FLJ41648 fis, cl... 60 7e-08
AK125323_1(AK125323|pid:none) Homo sapiens cDNA FLJ43333 fis, cl... 60 7e-08
AP008207_1658(AP008207|pid:none) Oryza sativa (japonica cultivar... 59 2e-07
AE014297_1419(AE014297|pid:none) Drosophila melanogaster chromos... 59 2e-07
AE014297_1418(AE014297|pid:none) Drosophila melanogaster chromos... 59 2e-07
T00257(T00257)hypothetical protein KIAA0476 - human 58 3e-07
(A2RSQ0) RecName: Full=DENN domain-containing protein 5B; AltNam... 58 3e-07
(O75064) RecName: Full=DENN domain-containing protein 4B; &AB38... 58 3e-07
CU207334_1(CU207334|pid:none) Mouse DNA sequence from clone CH29... 58 3e-07
AB007945_1(AB007945|pid:none) Homo sapiens mRNA for KIAA0476 pro... 58 3e-07
U49945_3(U49945|pid:none) Caenorhabditis elegans cosmid C02H7, c... 58 4e-07
U93181_1(U93181|pid:none) Homo sapiens nuclear dual-specificity ... 57 5e-07
CP001574_699(CP001574|pid:none) Micromonas sp. RCC299 chromosome... 57 6e-07
BX001012_3(BX001012|pid:none) Zebrafish DNA sequence from clone ... 57 8e-07
BC067136_1(BC067136|pid:none) Danio rerio DENN/MADD domain conta... 57 8e-07
T13717(T13717) CRAG protein - fruit fly (Drosophila melanogaster... 56 1e-06
CP001326_696(CP001326|pid:none) Micromonas sp. RCC299 chromosome... 56 1e-06
AE014298_1264(AE014298|pid:none) Drosophila melanogaster chromos... 56 1e-06
AE014296_292(AE014296|pid:none) Drosophila melanogaster chromoso... 55 2e-06
AE014296_294(AE014296|pid:none) Drosophila melanogaster chromoso... 55 2e-06
AL117448_1(AL117448|pid:none) Homo sapiens mRNA; cDNA DKFZp586B1... 55 2e-06
AK294016_1(AK294016|pid:none) Homo sapiens cDNA FLJ58453 complet... 55 2e-06
(Q6IQ26) RecName: Full=DENN domain-containing protein 5A; AltNam... 55 2e-06
BC166235_1(BC166235|pid:none) Xenopus tropicalis hypothetical pr... 55 2e-06
T17242(T17242)hypothetical protein DKFZp586B1417.1 - human (frag... 55 2e-06
AJ245569_1(AJ245569|pid:none) Mus musculus partial mRNA for hypo... 55 2e-06
AK295881_1(AK295881|pid:none) Homo sapiens cDNA FLJ61286 complet... 55 2e-06
AK302478_1(AK302478|pid:none) Homo sapiens cDNA FLJ56807 complet... 54 4e-06
AC006569_12(AC006569|pid:none) Arabidopsis thaliana chromosome 2... 54 4e-06
AB015477_21(AB015477|pid:none) Arabidopsis thaliana genomic DNA,... 54 7e-06
AL691450_9(AL691450|pid:none) Mouse DNA sequence from clone RP23... 53 1e-05
AL691450_8(AL691450|pid:none) Mouse DNA sequence from clone RP23... 53 1e-05
AY263984_1(AY263984|pid:none) Mus musculus MAP-kinase activating... 53 1e-05
AB002356_1(AB002356|pid:none) Homo sapiens mRNA for KIAA0358 gen... 53 1e-05
AL691450_7(AL691450|pid:none) Mouse DNA sequence from clone RP23... 53 1e-05
BC040484_1(BC040484|pid:none) Homo sapiens MAP-kinase activating... 53 1e-05
AY263988_1(AY263988|pid:none) Mus musculus MAP-kinase activating... 53 1e-05
BC125676_1(BC125676|pid:none) Xenopus tropicalis hypothetical pr... 53 1e-05
AK036347_1(AK036347|pid:none) Mus musculus 16 days neonate cereb... 53 1e-05
AY263986_1(AY263986|pid:none) Mus musculus MAP-kinase activating... 53 1e-05
(Q80WL7) RecName: Full=MAP kinase-activating death domain protei... 53 1e-05
AY263989_1(AY263989|pid:none) Mus musculus MAP-kinase activating... 53 1e-05
(Q8WXG5) RecName: Full=MAP kinase-activating death domain protei... 53 1e-05
AL691450_13(AL691450|pid:none) Mouse DNA sequence from clone RP2... 53 1e-05
U77352_1(U77352|pid:none) Homo sapiens MAP kinase-activating dea... 53 1e-05
U44953_1(U44953|pid:none) Homo sapiens DENN mRNA, complete cds. 53 1e-05
AL691450_5(AL691450|pid:none) Mouse DNA sequence from clone RP23... 53 1e-05
FN357299_34(FN357299|pid:none) Schistosoma mansoni genome sequen... 52 2e-05
AF440103_1(AF440103|pid:none) Homo sapiens insulinoma-glucagonom... 52 3e-05
AF440434_1(AF440434|pid:none) Homo sapiens insulinoma-glucagonom... 52 3e-05
AF440100_1(AF440100|pid:none) Homo sapiens insulinoma-glucagonom... 52 3e-05
AF440101_1(AF440101|pid:none) Homo sapiens insulinoma-glucagonom... 52 3e-05
FN357359_28(FN357359|pid:none) Schistosoma mansoni genome sequen... 51 3e-05
AL772228_1(AL772228|pid:none) Mouse DNA sequence from clone RP23... 51 4e-05
BC127590_1(BC127590|pid:none) Danio rerio hypothetical protein L... 51 4e-05
BC151819_1(BC151819|pid:none) Bos taurus SET binding factor 1, m... 50 6e-05
AK125842_1(AK125842|pid:none) Homo sapiens cDNA FLJ43854 fis, cl... 50 8e-05
BC124163_1(BC124163|pid:none) Danio rerio similar to DENN/MADD d... 50 8e-05
(Q9H6N4) RecName: Full=DENN domain-containing protein 4C; &AL16... 50 8e-05
FN357596_9(FN357596|pid:none) Schistosoma mansoni genome sequenc... 49 1e-04
AE014298_2194(AE014298|pid:none) Drosophila melanogaster chromos... 49 2e-04
AF534403_1(AF534403|pid:none) Homo sapiens c-MYC promoter-bindin... 49 2e-04
BC028057_1(BC028057|pid:none) Homo sapiens DENN/MADD domain cont... 49 2e-04
AK290292_1(AK290292|pid:none) Homo sapiens cDNA FLJ77039 partial... 49 2e-04
AK299570_1(AK299570|pid:none) Homo sapiens cDNA FLJ52112 complet... 49 2e-04
BC163551_1(BC163551|pid:none) Danio rerio DENN/MADD domain conta... 47 8e-04
AF093637_1(AF093637|pid:none) Drosophila melanogaster SET domain... 46 0.001
AP007157_443(AP007157|pid:none) Aspergillus oryzae RIB40 genomic... 44 0.005
CU638743_450(CU638743|pid:none) Podospora anserina genomic DNA c... 44 0.005
AL807577_16(AL807577|pid:none) Aspergillus fumigatus BAC AFA12F2. 44 0.005
AF100657_2(AF100657|pid:none) Caenorhabditis elegans cosmid F52C... 44 0.007
AM270172_26(AM270172|pid:none) Aspergillus niger contig An08c017... 44 0.007
F88640(F88640)protein F52C12.4 [imported] - Caenorhabditis elegans 44 0.007
BX284747_5(BX284747|pid:none) Neurospora crassa DNA linkage grou... 42 0.021
AM920436_2180(AM920436|pid:none) Penicillium chrysogenum Wiscons... 42 0.021
BC160823_1(BC160823|pid:none) Rattus norvegicus hypothetical LOC... 39 0.17
AM502222_57(AM502222|pid:none) Leishmania infantum chromosome 4. 39 0.23
BC009354_1(BC009354|pid:none) Homo sapiens DENN/MADD domain cont... 36 1.5
EU221556_1(EU221556|pid:none) Bos taurus clone 2_71 alpha S1 cas... 35 1.9
EU221559_1(EU221559|pid:none) Bos taurus clone 11_48 alpha S1 ca... 35 1.9
EU221561_1(EU221561|pid:none) Bos taurus clone 2_49 alpha S1 cas... 35 3.3
EU221555_1(EU221555|pid:none) Bos taurus clone 2_61 alpha S1 cas... 35 3.3
AC016041_16(AC016041|pid:none) Genomic sequence for Arabidopsis ... 35 3.3
KASHS1(A25069) alpha-s1-casein precursor - sheep &X03237_1(X032... 35 3.3
(Q59PL9) RecName: Full=Eukaryotic translation initiation factor ... 33 9.6
FN357416_18(FN357416|pid:none) Schistosoma mansoni genome sequen... 33 9.6
AY669748_1(AY669748|pid:none) HIV-1 isolate 98IN022 from India e... 33 9.7

>AK067308_1(AK067308|pid:none) Oryza sativa Japonica Group cDNA
clone:J013100G23, full insert sequence.
&AP004140_6(AP004140|pid:none)
&AP008208_2711(AP008208|pid:none)
Length = 832

Score = 88.2 bits (217), Expect = 3e-16
Identities = 40/104 (38%), Positives = 68/104 (65%), Gaps = 4/104 (3%)
Frame = +2

Query: 26 LSLDCILRVLSAVLLEQRVVFVCDNLSILSSCCFSMISLIHPLKWQGLFVPILPQNLLDY 205
L L+ ++ + +A LLE++++ VC NL +LS+ S+I LI P +WQ L +P+LP +++D+
Sbjct: 614 LRLEHVMTLFAAALLEKQIIIVCSNLGMLSASVLSIIPLIRPYQWQSLLIPVLPNDMMDF 673

Query: 206 LEAPVPFIVGV----SHINRRNFDGLIVDIKSNKITYNRCSQPP 325
L+APVP+IVGV S ++ R + +++D N+I Q P
Sbjct: 674 LDAPVPYIVGVQNKTSDVHSRLVNAVVIDANKNQIKSTSVPQLP 717

Lambda K H
0.318 0.134 0.401

Gapped
Lambda K H
0.267 0.0410 0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3236559
Number of Hits to DB: 954,340,003
Number of extensions: 16389611
Number of successful extensions: 41716
Number of sequences better than 10.0: 189
Number of HSP's gapped: 41707
Number of HSP's successfully gapped: 189
Length of query: 250
Length of database: 1,051,180,864
Length adjustment: 125
Effective length of query: 125
Effective length of database: 646,610,989
Effective search space: 80826373625
Effective search space used: 80826373625
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 31 (16.5 bits)

PSORT

psg: 0.75 gvh: 0.52 alm: 0.34 top: 0.53 tms: 0.00 mit: 0.23 mip: 0.00
nuc: 0.00 erl: 0.00 erm: 0.00 pox: 0.00 px2: 0.00 vac: 0.00 rnp: 0.00
act: 0.00 caa: 0.00 yqr: 0.00 tyr: 0.00 leu: 0.00 gpi: 0.00 myr: 0.50
dna: 0.00 rib: 0.00 bac: 0.00 m1a: 0.00 m1b: 0.00 m2 : 0.00 mNt: 0.00
m3a: 0.00 m3b: 0.00 m_ : 1.00

52.0 %: nuclear
28.0 %: cytoplasmic
8.0 %: mitochondrial
8.0 %: Golgi
4.0 %: vesicles of secretory system

>> prediction for Contig-U14247-1 is nuc

VS (DIR, S) 0
VH (FL, L) 0
VF (FL, S) 0
AH (FL, L) 0
AF (FL, S) 0
SL (DIR, L) 0
SS (DIR, S) 0
SH (FL, L) 0
SF (FL, S) 0
CH (FL, L) 1
CF (FL, S) 0
FCL (DIR, L) 0
FC (DIR, S) 0
FC-IC (SUB) 0