Contig-U14235-1
Contig ID Contig-U14235-1
Contig update 2002.12.18
Contig sequence
>Contig-U14235-1 (Contig-U14235-1Q) /CSM_Contig/Contig-U14235-1Q.Seq.d
NNNNNNNNNNAAAGAAGAAAAACTGGTTCAAGAAGAAATACCCTCTGGAC
TACCGAAGATGATGAGAAATTCGCTGAAGCTTACAATAAATATGGTAAAA
GTTGGAAAACTATTCATAGTCATTTACCTGATAAAACTAGAGAACAAGTT
CAAAGTCATGGTCAATATTTAATTAGAATTGGTAAATTACAAGATCTTCA
TAAAGATGGTAGAAGAACTAGACATATAAAACCTGATCTTGGATTAGGTA
ATAATAATAATAATAGCAATAGTAATAGCAATAATAACAATAACAATAAC
AATAATAATAGTGGTGGAGGTAATAATCATCACCATTCATCTCATCATAA
CCATCATTCACCATCTCACCATAATGATAATAAACACCATCACCATCATA
ACAACAACAACAATAATAACAATAATAATAATAACCACAACAATAATTTA
AACATTTTAAATAATTTAACAAATAACAATCATAATAACAATAATAATTA
TNATTACGATTCCCCAC

Gap no gap
Contig length 517
Chromosome number (1..6, M) -
Chromosome length -
Start point -
End point -
Strand (PLUS/MINUS) -
Number of clones 1
Number of EST 1
Link to clone list U14235
List of clone(s)

est1=CHA129Z,1,508
Translated Amino Acid sequence
XXXXRRKTGSRRNTLWTTEDDEKFAEAYNKYGKSWKTIHSHLPDKTREQVQSHGQYLIRI
GKLQDLHKDGRRTRHIKPDLGLGNNNNNSNSNSNNNNNNNNNNSGGGNNHHHSSHHNHHS
PSHHNDNKHHHHHNNNNNNNNNNNNHNNNLNILNNLTNNNHNNNNNYXYDSP


Translated Amino Acid sequence (All Frames)
Frame A:
XXXXRRKTGSRRNTLWTTEDDEKFAEAYNKYGKSWKTIHSHLPDKTREQVQSHGQYLIRI
GKLQDLHKDGRRTRHIKPDLGLGNNNNNSNSNSNNNNNNNNNNSGGGNNHHHSSHHNHHS
PSHHNDNKHHHHHNNNNNNNNNNNNHNNNLNILNNLTNNNHNNNNNYXYDSP


Frame B:
xxxkeeklvqeeipsglpkmmrnslkltinmvkvgklfiviyliklenkfkvmvni*lel
vnykifikmveeldi*nlild*viiiiiaiviaiitititiiivveviiitihliitiih
hltimiintitiittttiitiiiitttii*tf*ii*qitiiitiiixitiph


Frame C:
xxxkkknwfkkkypldyrr**eir*slq*iw*klenys*sft**n*rtsskswsifn*nw
*itrss*rw*kn*tykt*swir******q***q**q*q*q***wwr**sspfiss*psft
isp****tpsps*qqqq**q****pqq*fkhfk*fnk*qs**q**lxlrfp


own update 2004. 6.10
Homology vs CSM-cDNA
Query= Contig-U14235-1 (Contig-U14235-1Q)
/CSM_Contig/Contig-U14235-1Q.Seq.d
(517 letters)

Database: CSM
6905 sequences; 5,674,871 total letters


Score E
Sequences producing significant alignments: (bits) Value

Contig-U14235-1 (Contig-U14235-1Q) /CSM_Contig/Conti... 472 e-133
Contig-U11735-1 (Contig-U11735-1Q) /CSM_Contig/Conti... 38 0.009
Contig-U11910-1 (Contig-U11910-1Q) /CSM_Contig/Conti... 36 0.036
Contig-U01253-1 (Contig-U01253-1Q) /CSM_Contig/Conti... 36 0.036
Contig-U12423-1 (Contig-U12423-1Q) /CSM_Contig/Conti... 34 0.14
Contig-U11870-1 (Contig-U11870-1Q) /CSM_Contig/Conti... 34 0.14
Contig-U14490-1 (Contig-U14490-1Q) /CSM_Contig/Conti... 32 0.56
Contig-U14260-1 (Contig-U14260-1Q) /CSM_Contig/Conti... 32 0.56
Contig-U13829-1 (Contig-U13829-1Q) /CSM_Contig/Conti... 32 0.56
Contig-U13531-1 (Contig-U13531-1Q) /CSM_Contig/Conti... 32 0.56

>Contig-U14235-1 (Contig-U14235-1Q) /CSM_Contig/Contig-U14235-1Q.Seq.d
Length = 517

Score = 472 bits (238), Expect = e-133
Identities = 238/238 (100%)
Strand = Plus / Plus


Query: 11 aaagaagaaaaactggttcaagaagaaataccctctggactaccgaagatgatgagaaat 70
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11 aaagaagaaaaactggttcaagaagaaataccctctggactaccgaagatgatgagaaat 70


Query: 71 tcgctgaagcttacaataaatatggtaaaagttggaaaactattcatagtcatttacctg 130
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 71 tcgctgaagcttacaataaatatggtaaaagttggaaaactattcatagtcatttacctg 130


Query: 131 ataaaactagagaacaagttcaaagtcatggtcaatatttaattagaattggtaaattac 190
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 131 ataaaactagagaacaagttcaaagtcatggtcaatatttaattagaattggtaaattac 190


Query: 191 aagatcttcataaagatggtagaagaactagacatataaaacctgatcttggattagg 248
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 191 aagatcttcataaagatggtagaagaactagacatataaaacctgatcttggattagg 248


Score = 50.1 bits (25), Expect = 2e-06
Identities = 25/25 (100%)
Strand = Plus / Plus


Query: 373 aatgataataaacaccatcaccatc 397
|||||||||||||||||||||||||
Sbjct: 373 aatgataataaacaccatcaccatc 397


Score = 32.2 bits (16), Expect = 0.56
Identities = 19/19 (100%)
Strand = Plus / Plus


Query: 499 tatnattacgattccccac 517
|||||||||||||||||||
Sbjct: 499 tatnattacgattccccac 517


Score = 30.2 bits (15), Expect = 2.2
Identities = 15/15 (100%)
Strand = Plus / Plus


Query: 311 gtggtggaggtaata 325
|||||||||||||||
Sbjct: 311 gtggtggaggtaata 325


>Contig-U11735-1 (Contig-U11735-1Q) /CSM_Contig/Contig-U11735-1Q.Seq.d
Length = 1850

Score = 38.2 bits (19), Expect = 0.009
Identities = 22/23 (95%)
Strand = Plus / Plus


Query: 164 aatatttaattagaattggtaaa 186
||||||||||||||| |||||||
Sbjct: 150 aatatttaattagaaatggtaaa 172


>Contig-U11910-1 (Contig-U11910-1Q) /CSM_Contig/Contig-U11910-1Q.Seq.d
Length = 763

Score = 36.2 bits (18), Expect = 0.036
Identities = 18/18 (100%)
Strand = Plus / Minus


Query: 164 aatatttaattagaattg 181
||||||||||||||||||
Sbjct: 340 aatatttaattagaattg 323


Database: CSM
Posted date: Jun 9, 2004 7:35 PM
Number of letters in database: 5,674,871
Number of sequences in database: 6905

Lambda K H
1.37 0.711 1.31

Gapped
Lambda K H
1.37 0.711 1.31


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3827
Number of Sequences: 6905
Number of extensions: 3827
Number of successful extensions: 326
Number of sequences better than 10.0: 100
length of query: 517
length of database: 5,674,871
effective HSP length: 16
effective length of query: 501
effective length of database: 5,564,391
effective search space: 2787759891
effective search space used: 2787759891
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 14 (28.2 bits)
dna update 2008.12.19
Homology vs DNA
Query= Contig-U14235-1 (Contig-U14235-1Q) /CSM_Contig/Contig-U14235-1Q.Seq.d
(517 letters)

Database: ddbj_A
92,845,959 sequences; 95,242,211,685 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value N

(BJ377035) Dictyostelium discoideum cDNA clone:ddc22i07, 3' ... 472 e-130 2
(AC116984) Dictyostelium discoideum chromosome 2 map 2567470... 52 0.020 1
(EX931469) li56d03.g7 Ginkgo female leaf (NYBG) Ginkgo bilob... 34 0.87 2
(DR073421) ik78h11.g1 Ginkgo female leaf (NYBG) Ginkgo bilob... 34 0.87 2
(ER537851) 1093015876355 Global-Ocean-Sampling_GS-35-01-01-1... 46 1.2 1
(AC123644) Mus musculus chromosome 15, clone RP23-85G7, comp... 44 4.9 1
(AC157240) Otolemur garnettii clone CH256-350L22, WORKING DR... 44 4.9 1
(AC156909) Bos taurus clone CH240-59M6, WORKING DRAFT SEQUEN... 44 4.9 1
(AC114104) Rattus norvegicus clone CH230-23N19, *** SEQUENCI... 44 4.9 1
(AM656412) Entamoeba moshkovskii FIC GSS, clone mosh039b11.q1k. 44 4.9 1
(EJ331175) 1092963438969 Global-Ocean-Sampling_GS-28-01-01-1... 44 4.9 1
(BZ933162) CH240_88M5.TJ CHORI-240 Bos taurus genomic clone ... 44 4.9 1
(ED050653) AUAC-aaq55a11.b1 Ascaris suum whole genome shotgu... 36 7.7 2
(CU928088) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 30 9.1 2

>(BJ377035) Dictyostelium discoideum cDNA clone:ddc22i07, 3' end,
single read.
Length = 508

Score = 472 bits (238), Expect(2) = e-130
Identities = 238/238 (100%)
Strand = Plus / Minus


Query: 11 aaagaagaaaaactggttcaagaagaaataccctctggactaccgaagatgatgagaaat 70
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 508 aaagaagaaaaactggttcaagaagaaataccctctggactaccgaagatgatgagaaat 449


Query: 71 tcgctgaagcttacaataaatatggtaaaagttggaaaactattcatagtcatttacctg 130
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 448 tcgctgaagcttacaataaatatggtaaaagttggaaaactattcatagtcatttacctg 389


Query: 131 ataaaactagagaacaagttcaaagtcatggtcaatatttaattagaattggtaaattac 190
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 388 ataaaactagagaacaagttcaaagtcatggtcaatatttaattagaattggtaaattac 329


Query: 191 aagatcttcataaagatggtagaagaactagacatataaaacctgatcttggattagg 248
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 328 aagatcttcataaagatggtagaagaactagacatataaaacctgatcttggattagg 271

Score = 30.2 bits (15), Expect(2) = e-130
Identities = 15/15 (100%)
Strand = Plus / Minus


Query: 503 attacgattccccac 517
|||||||||||||||
Sbjct: 16 attacgattccccac 2

Lambda K H
1.37 0.711 1.31

Matrix: blastn matrix:1 -3
Number of Sequences: 92845959
Number of Hits to DB: 305,840,729
Number of extensions: 18364979
Number of successful extensions: 1290466
Number of sequences better than 10.0: 14
Length of query: 517
Length of database: 95,242,211,685
Length adjustment: 23
Effective length of query: 494
Effective length of database: 93,106,754,628
Effective search space: 45994736786232
Effective search space used: 45994736786232
X1: 11 (21.8 bits)
S2: 21 (42.1 bits)

protein update 2009. 7.10
Homology vs Protein
Query= Contig-U14235-1 (Contig-U14235-1Q) /CSM_Contig/Contig-U14235-1Q.Seq.d
(517 letters)

Database: nrp_B
3,236,559 sequences; 1,051,180,864 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value

(Q54K19) RecName: Full=Myb-like protein D; 113 2e-24
(Q54YB7) RecName: Full=Myb-like protein F; 80 3e-14
AC151822_5(AC151822|pid:none) Medicago truncatula clone mth2-32h... 49 6e-05
AB210850_1(AB210850|pid:none) Lemna gibba LgLHY H2 mRNA for LHY ... 48 1e-04
BT067765_1(BT067765|pid:none) Zea mays full-length cDNA clone ZM... 48 2e-04
DQ822986_1(DQ822986|pid:none) Glycine max MYB transcription fact... 48 2e-04
FJ024049_1(FJ024049|pid:none) Zea mays MYB-like protein E1 (MYBE... 48 2e-04
DQ822939_1(DQ822939|pid:none) Glycine max MYB transcription fact... 47 2e-04
DQ822925_1(DQ822925|pid:none) Glycine max MYB transcription fact... 47 2e-04
AC126787_20(AC126787|pid:none) Medicago truncatula clone mth2-11... 47 2e-04
AM485008_1(AM485008|pid:none) Vitis vinifera contig VV78X059648.... 47 2e-04
AP003225_15(AP003225|pid:none) Oryza sativa Japonica Group genom... 47 4e-04
AK316829_1(AK316829|pid:none) Arabidopsis thaliana AT1G01060 mRN... 47 4e-04
A68428_1(A68428|pid:none) Sequence 1 from Patent WO9749811. &AJ... 47 4e-04
AB363965_1(AB363965|pid:none) Chlamydomonas reinhardtii ROC40 mR... 46 5e-04
AC005310_12(AC005310|pid:none) Arabidopsis thaliana chromosome 2... 46 6e-04
DQ822977_1(DQ822977|pid:none) Glycine max MYB transcription fact... 46 6e-04
AB210849_1(AB210849|pid:none) Lemna gibba LgLHY H1 mRNA for LHY ... 46 6e-04
AB115696_1(AB115696|pid:none) Arabidopsis thaliana EPR1 mRNA for... 46 6e-04
EU076434_1(EU076434|pid:none) Glycine max late elongated hypocot... 46 6e-04
AY371287_1(AY371287|pid:none) Mesembryanthemum crystallinum circ... 46 6e-04
AM467028_4(AM467028|pid:none) Vitis vinifera contig VV78X185711.... 46 6e-04
FJ536229_1(FJ536229|pid:none) Mirabilis jalapa late elongated hy... 46 6e-04
AB429410_1(AB429410|pid:none) Populus nigra PnLHY1 mRNA for tran... 46 6e-04
EU078066_1(EU078066|pid:none) Solanum chilense putative At5g3726... 45 8e-04
EU078063_1(EU078063|pid:none) Solanum chilense putative At5g3726... 45 8e-04
EU078084_1(EU078084|pid:none) Solanum chilense putative At5g3726... 45 8e-04
EU078037_1(EU078037|pid:none) Solanum peruvianum putative At5g37... 45 8e-04
EU078075_1(EU078075|pid:none) Solanum chilense putative At5g3726... 45 8e-04
EU078091_1(EU078091|pid:none) Solanum chilense putative At5g3726... 45 8e-04
EU078085_1(EU078085|pid:none) Solanum chilense putative At5g3726... 45 8e-04
EU078030_1(EU078030|pid:none) Solanum peruvianum putative At5g37... 45 8e-04
AY941426_1(AY941426|pid:none) Lycopersicon chilense putative At5... 45 0.001
EU078083_1(EU078083|pid:none) Solanum chilense putative At5g3726... 45 0.001
EU078058_1(EU078058|pid:none) Solanum peruvianum putative At5g37... 45 0.001
EU078067_1(EU078067|pid:none) Solanum chilense putative At5g3726... 45 0.001
AY941451_1(AY941451|pid:none) Lycopersicon pimpinellifolium puta... 45 0.001
AY941415_1(AY941415|pid:none) Lycopersicon peruvianum putative A... 45 0.001
AY941418_1(AY941418|pid:none) Lycopersicon peruvianum putative A... 45 0.001
EU078035_1(EU078035|pid:none) Solanum peruvianum putative At5g37... 45 0.001
AY941435_1(AY941435|pid:none) Solanum habrochaites putative At5g... 45 0.001
EU078068_1(EU078068|pid:none) Solanum chilense putative At5g3726... 45 0.001
EU078076_1(EU078076|pid:none) Solanum chilense putative At5g3726... 45 0.001
AY941420_1(AY941420|pid:none) Lycopersicon peruvianum putative A... 45 0.001
EU078088_1(EU078088|pid:none) Solanum chilense putative At5g3726... 45 0.001
EU960292_1(EU960292|pid:none) Zea mays clone 223242 unknown mRNA. 45 0.001
EU078057_1(EU078057|pid:none) Solanum peruvianum putative At5g37... 45 0.001
EU078034_1(EU078034|pid:none) Solanum peruvianum putative At5g37... 45 0.001
EU078078_1(EU078078|pid:none) Solanum chilense putative At5g3726... 45 0.001
EU078043_1(EU078043|pid:none) Solanum peruvianum putative At5g37... 45 0.001
EU078060_1(EU078060|pid:none) Solanum peruvianum putative At5g37... 45 0.001
EU078061_1(EU078061|pid:none) Solanum peruvianum putative At5g37... 45 0.001
EU078065_1(EU078065|pid:none) Solanum chilense putative At5g3726... 45 0.001
AY941423_1(AY941423|pid:none) Lycopersicon peruvianum putative A... 45 0.001
AY941422_1(AY941422|pid:none) Lycopersicon peruvianum putative A... 45 0.001
AY941425_1(AY941425|pid:none) Lycopersicon chilense putative At5... 45 0.001
AY941456_1(AY941456|pid:none) Lycopersicon pimpinellifolium puta... 45 0.001
EF148067_1(EF148067|pid:none) Populus trichocarpa clone WS0127_E... 45 0.001
EU078044_1(EU078044|pid:none) Solanum peruvianum putative At5g37... 45 0.001
EU078049_1(EU078049|pid:none) Solanum peruvianum putative At5g37... 45 0.001
(Q54IF9) RecName: Full=Myb-like protein G; 45 0.001
DQ103498_1(DQ103498|pid:none) Solanum ochranthum putative At5g37... 45 0.001
EU078054_1(EU078054|pid:none) Solanum peruvianum putative At5g37... 45 0.001
AY941419_1(AY941419|pid:none) Lycopersicon peruvianum putative A... 45 0.001
EU078073_1(EU078073|pid:none) Solanum chilense putative At5g3726... 45 0.001
EU078047_1(EU078047|pid:none) Solanum peruvianum putative At5g37... 45 0.001
AY941424_1(AY941424|pid:none) Lycopersicon peruvianum putative A... 45 0.001
EU078051_1(EU078051|pid:none) Solanum peruvianum putative At5g37... 45 0.001
EU976661_1(EU976661|pid:none) Zea mays clone 986506 hypothetical... 45 0.001
EU078086_1(EU078086|pid:none) Solanum chilense putative At5g3726... 45 0.001
AY611029_1(AY611029|pid:none) Castanea sativa late elongated hyp... 45 0.001
AC151804_19(AC151804|pid:none) Solanum demissum chromosome 5 clo... 44 0.002
EU076433_1(EU076433|pid:none) Glycine max late elongated hypocot... 44 0.002
AJ420902_1(AJ420902|pid:none) Phaseolus vulgaris mRNA for LHY pr... 44 0.002
BT041237_1(BT041237|pid:none) Zea mays full-length cDNA clone ZM... 44 0.002
EU955544_1(EU955544|pid:none) Zea mays clone 1536169 LHY protein... 44 0.003
EU954568_1(EU954568|pid:none) Zea mays clone 1470263 LHY protein... 44 0.003
BT062361_1(BT062361|pid:none) Zea mays full-length cDNA clone ZM... 43 0.004
AP004460_25(AP004460|pid:none) Oryza sativa Japonica Group genom... 43 0.004
AP008214_282(AP008214|pid:none) Oryza sativa (japonica cultivar-... 43 0.004
AP004071_5(AP004071|pid:none) Oryza sativa Japonica Group genomi... 43 0.005
CP001330_126(CP001330|pid:none) Micromonas sp. RCC299 chromosome... 43 0.005
AY452478_1(AY452478|pid:none) Oryza sativa (japonica cultivar-gr... 43 0.005
AC061957_6(AC061957|pid:none) Sequence of BAC F22L4 from Arabido... 42 0.007
AJ937211_1(AJ937211|pid:none) Arabidopsis thaliana mRNA for myb ... 42 0.007
Y12776_3(Y12776|pid:none) Arabidopsis thaliana DNA, 40 kb surrou... 42 0.007
BT037661_1(BT037661|pid:none) Zea mays full-length cDNA clone ZM... 42 0.009
(Q54Z40) RecName: Full=Myb-like protein H; 42 0.009
EU956129_1(EU956129|pid:none) Zea mays clone 1557827 DNA binding... 42 0.009
AY740077_1(AY740077|pid:none) Ostreococcus tauri MYB transcripti... 42 0.009
AF007269_11(AF007269|pid:none) Arabidopsis thaliana BAC IG002N01... 42 0.009
AL161491_37(AL161491|pid:none) Arabidopsis thaliana DNA chromoso... 42 0.009
CR954206_438(CR954206|pid:none) Ostreococcus tauri strain OTTH05... 42 0.009
AL662987_20(AL662987|pid:none) Oryza sativa genomic DNA, chromos... 42 0.009
CS145504_1(CS145504|pid:none) Sequence 11 from Patent EP1566444. 42 0.009
AJ937212_1(AJ937212|pid:none) Arabidopsis thaliana mRNA for myb ... 42 0.009
AB493668_1(AB493668|pid:none) Arabidopsis thaliana At4g01280 mRN... 42 0.009
AY091106_1(AY091106|pid:none) Arabidopsis thaliana unknown prote... 41 0.016
DQ822912_1(DQ822912|pid:none) Glycine max MYB transcription fact... 41 0.016
AC128646_5(AC128646|pid:none) Oryza sativa chromosome 3 BAC OSJN... 41 0.016
AM455206_1(AM455206|pid:none) Vitis vinifera contig VV78X069637.... 41 0.016
AC016661_17(AC016661|pid:none) Arabidopsis thaliana chromosome 3... 41 0.016
AJ937213_1(AJ937213|pid:none) Arabidopsis thaliana mRNA for myb ... 41 0.016
EF025311_1(EF025311|pid:none) Catharanthus roseus clone 4C19 MYB... 41 0.016
EF148355_1(EF148355|pid:none) Populus trichocarpa x Populus delt... 41 0.016
AP005197_14(AP005197|pid:none) Oryza sativa Japonica Group genom... 41 0.020
EU963341_1(EU963341|pid:none) Zea mays clone 261093 DNA binding ... 40 0.026
BT066074_1(BT066074|pid:none) Zea mays full-length cDNA clone ZM... 40 0.026
EU963464_1(EU963464|pid:none) Zea mays clone 262971 unknown mRNA. 40 0.026
AP005823_19(AP005823|pid:none) Oryza sativa Japonica Group genom... 40 0.026
DQ822984_1(DQ822984|pid:none) Glycine max MYB transcription fact... 40 0.026
BT040600_1(BT040600|pid:none) Zea mays full-length cDNA clone ZM... 40 0.026
EU116031_1(EU116031|pid:none) Chimonanthus praecox transcription... 40 0.026
(Q5SXM2) RecName: Full=snRNA-activating protein complex subunit ... 40 0.035
AJ430052_1(AJ430052|pid:none) Oryza sativa mRNA for transcriptio... 40 0.035
AF032387_1(AF032387|pid:none) Homo sapiens snRNA activating prot... 40 0.035
DQ822917_1(DQ822917|pid:none) Glycine max MYB transcription fact... 40 0.045
CP000598_49(CP000598|pid:none) Ostreococcus lucimarinus CCE9901 ... 40 0.045
AP008207_3035(AP008207|pid:none) Oryza sativa (japonica cultivar... 40 0.045
AB025606_16(AB025606|pid:none) Arabidopsis thaliana genomic DNA,... 40 0.045
AJ430054_1(AJ430054|pid:none) Oryza sativa partial myb15 gene fo... 40 0.045
AY550303_1(AY550303|pid:none) Arabidopsis thaliana MYB transcrip... 40 0.045
AP003241_27(AP003241|pid:none) Oryza sativa Japonica Group genom... 40 0.045
BC059803_1(BC059803|pid:none) Danio rerio transcription factor c... 39 0.059
DQ822956_1(DQ822956|pid:none) Glycine max MYB transcription fact... 39 0.059
EF677005_1(EF677005|pid:none) Picea sitchensis clone WS02759_P20... 39 0.059
EF025314_1(EF025314|pid:none) Catharanthus roseus clone 4C80 MYB... 39 0.059
AP001305_11(AP001305|pid:none) Arabidopsis thaliana genomic DNA,... 39 0.077
AC146552_8(AC146552|pid:none) Medicago truncatula clone mth2-9d1... 39 0.077
AP003415_4(AP003415|pid:none) Oryza sativa Japonica Group genomi... 39 0.077
AJ583497_1(AJ583497|pid:none) Arabidopsis thaliana mRNA for alwa... 39 0.077
AY042894_1(AY042894|pid:none) Arabidopsis thaliana putative prot... 39 0.10
AJ937209_1(AJ937209|pid:none) Arabidopsis thaliana mRNA for myb ... 39 0.10
AL162973_15(AL162973|pid:none) Arabidopsis thaliana DNA chromoso... 39 0.10
CR382137_139(CR382137|pid:none) Debaryomyces hansenii strain CBS... 39 0.10
AK317012_1(AK317012|pid:none) Arabidopsis thaliana AT5G02840 mRN... 39 0.10
BT035959_1(BT035959|pid:none) Zea mays full-length cDNA clone ZM... 39 0.10
BT068965_1(BT068965|pid:none) Zea mays full-length cDNA clone ZM... 38 0.13
(Q54HX6) RecName: Full=Myb-like protein I; 38 0.13
DQ074476_1(DQ074476|pid:none) Malus x domestica MYBR5 mRNA, comp... 38 0.13
AY740078_1(AY740078|pid:none) Ostreococcus tauri MYB transcripti... 38 0.13
CP000584_462(CP000584|pid:none) Ostreococcus lucimarinus CCE9901... 38 0.13
EU954865_1(EU954865|pid:none) Zea mays clone 1488290 hypothetica... 38 0.13
FM992691_416(FM992691|pid:none) Candida dubliniensis CD36 chromo... 38 0.13
(B0G0Y5) RecName: Full=Myb-like protein AA; 38 0.17
Z11534_1(Z11534|pid:none) D.discoideum DNA for Myb DNA-Binding d... 38 0.17
AC151426_11(AC151426|pid:none) Medicago truncatula clone mth2-6o... 38 0.17
DQ356929_1(DQ356929|pid:none) Euplotes aediculatus EMYB4 (emyb4)... 38 0.17
CR954203_298(CR954203|pid:none) Ostreococcus tauri strain OTTH05... 37 0.22
CR380958_101(CR380958|pid:none) Candida glabrata strain CBS138 c... 37 0.29
CP000501_43(CP000501|pid:none) Pichia stipitis CBS 6054 chromoso... 37 0.29
(P01103) RecName: Full=Myb proto-oncogene protein; AltName: Full... 37 0.29
AC006528_6(AC006528|pid:none) Arabidopsis thaliana chromosome 2 ... 37 0.29
BT061882_1(BT061882|pid:none) Zea mays full-length cDNA clone ZM... 37 0.29
AB006697_8(AB006697|pid:none) Arabidopsis thaliana genomic DNA, ... 37 0.29
BT024758_1(BT024758|pid:none) Arabidopsis thaliana At2g13960 mRN... 37 0.29
TVMSMB(A25285;A23939;A93630;I59075;I53245;S07545;I49626) transfo... 37 0.38
AJ606318_1(AJ606318|pid:none) Homo sapiens mRNA for v-myb myelob... 37 0.38
TVHUMB(A26661;A41952;S11197;I59517;I80450;I58400;S08492)transfor... 37 0.38
D26148_1(D26148|pid:none) Bos taurus mRNA for protooncogene c-my... 37 0.38
S11198(S11198) transforming protein myb (clone Mbm-2) - human (f... 37 0.38
(P06876) RecName: Full=Myb proto-oncogene protein; AltName: Full... 37 0.38
AF191559_1(AF191559|pid:none) Danio rerio transcription factor c... 37 0.38
AL162874_8(AL162874|pid:none) Arabidopsis thaliana DNA chromosom... 37 0.38
AJ606317_1(AJ606317|pid:none) Homo sapiens mRNA for v-myb myelob... 37 0.38
AJ606320_1(AJ606320|pid:none) Homo sapiens mRNA for v-myb myelob... 37 0.38
AJ606322_1(AJ606322|pid:none) Homo sapiens mRNA for v-myb myelob... 37 0.38
AJ616791_8(AJ616791|pid:none) Homo sapiens c-myb gene for v-myb ... 37 0.38
M15024_1(M15024|pid:none) Human c-myb mRNA, complete cds. 37 0.38
X02774_1(X02774|pid:none) Mouse myb proto-oncogene mRNA fragment... 37 0.38
AP008211_1376(AP008211|pid:none) Oryza sativa (japonica cultivar... 37 0.38
M12848_1(M12848|pid:none) Mouse myb proto-oncogene mRNA encoding... 37 0.38
U22376_3(U22376|pid:none) Human (c-myb) gene, complete primary c... 37 0.38
AF371976_1(AF371976|pid:none) Arabidopsis thaliana putative c-my... 37 0.38
AY893841_1(AY893841|pid:none) Synthetic construct Homo sapiens c... 37 0.38
AJ616235_1(AJ616235|pid:none) Homo sapiens mRNA for v-myb myelob... 37 0.38
AJ606323_1(AJ606323|pid:none) Homo sapiens mRNA for v-myb myelob... 37 0.38
AE014185_324(AE014185|pid:none) Plasmodium falciparum 3D7 chromo... 37 0.38
(P10242) RecName: Full=Myb proto-oncogene protein; AltName: Full... 37 0.38
AY034964_1(AY034964|pid:none) Arabidopsis thaliana putative MYB ... 36 0.50
AF214117_1(AF214117|pid:none) Arabidopsis thaliana putative c-my... 36 0.50
CP001160_492(CP001160|pid:none) Thalassiosira pseudonana CCMP133... 36 0.50
BT051984_1(BT051984|pid:none) Medicago truncatula clone MTYF9_FA... 36 0.50
AM447500_1(AM447500|pid:none) Vitis vinifera contig VV78X097283.... 36 0.50
EZ000490_1(EZ000490|pid:none) TSA: Culex tarsalis Ctar-354 conse... 36 0.50
CR940353_465(CR940353|pid:none) Theileria annulata strain Ankara... 36 0.50
AC011436_22(AC011436|pid:none) Arabidopsis thaliana chromosome I... 36 0.50
AB056123_1(AB056123|pid:none) Nicotiana tabacum NtmybA2 mRNA for... 36 0.50
DQ653075_1(DQ653075|pid:none) Arabidopsis thaliana clone 0000017... 36 0.65
M35509_1(M35509|pid:none) Chicken c-myb gene, exon 4. 36 0.65
AB114037_1(AB114037|pid:none) Oryzias latipes c-myb mRNA for tra... 36 0.65
S61155(S61155) hypothetical protein YDR359c - yeast (Saccharomyc... 36 0.65
AJ567344_1(AJ567344|pid:none) Populus tremula x Populus tremuloi... 36 0.65
(Q08759) RecName: Full=Myb protein; &I51581(I51581) &L22741_1(L... 36 0.65
BC096006_1(BC096006|pid:none) Xenopus tropicalis v-myb myeloblas... 36 0.65
AC011560_12(AC011560|pid:none) Arabidopsis thaliana chromosome 3... 36 0.65
L00056_1(L00056|pid:none) Chicken c-myb gene (analogue to v-myb ... 35 0.85
BC101186_1(BC101186|pid:none) Homo sapiens v-myb myeloblastosis ... 35 0.85
CU928169_28(CU928169|pid:none) Kluyveromyces thermotolerans stra... 35 0.85
BC118123_1(BC118123|pid:none) Bos taurus v-myb myeloblastosis vi... 35 0.85
AF530160_1(AF530160|pid:none) Arabidopsis thaliana myb/SANT doma... 35 0.85
AF189785_1(AF189785|pid:none) Physcomitrella patens putative c-m... 35 0.85
FN392319_336(FN392319|pid:none) Pichia pastoris GS115 chromosome... 35 0.85
AM910988_182(AM910988|pid:none) Plasmodium knowlesi strain H chr... 35 0.85
(P04197) RecName: Full=Myb protein; &AE014298_2354(AE014298|pid... 35 0.85
TVFFMA(S00578;A01345) transforming protein myb - fruit fly (Dros... 35 0.85
AC006922_15(AC006922|pid:none) Arabidopsis thaliana chromosome 2... 35 0.85
CP001325_737(CP001325|pid:none) Micromonas sp. RCC299 chromosome... 35 0.85
X13294_1(X13294|pid:none) Human mRNA for myb-related gene A-myb ... 35 0.85
CU928174_692(CU928174|pid:none) Zygosaccharomyces rouxii strain ... 35 0.85
BC103533_1(BC103533|pid:none) Mus musculus myeloblastosis oncoge... 35 0.85
(P51960) RecName: Full=Myb-related protein A; AltName: Full=A-Myb; 35 0.85
M11281_1(M11281|pid:none) D.melanogaster c-myb proto-oncogene. 35 0.85
AJ719577_1(AJ719577|pid:none) Gallus gallus mRNA for hypothetica... 35 1.1
(P48972) RecName: Full=Myb-related protein B; AltName: Full=B-My... 35 1.1
AC157506_6(AC157506|pid:none) Medicago truncatula chromosome 7 c... 35 1.1
BC057141_1(BC057141|pid:none) Mus musculus REST corepressor 3, m... 35 1.1
(Q5ZJ40) RecName: Full=REST corepressor 3; &AJ720594_1(AJ720594... 35 1.1
BC031608_1(BC031608|pid:none) Homo sapiens REST corepressor 3, m... 35 1.1
AK223482_1(AK223482|pid:none) Homo sapiens mRNA for MYB-related ... 35 1.1
AC016041_20(AC016041|pid:none) Genomic sequence for Arabidopsis ... 35 1.1
AF190311_1(AF190311|pid:none) Lycopodium sp. BW-2000 c-myb-like ... 35 1.1
BC031242_1(BC031242|pid:none) Homo sapiens coiled-coil domain co... 35 1.1
AY892448_1(AY892448|pid:none) Synthetic construct Homo sapiens c... 35 1.1
(P01104) RecName: Full=Transforming protein Myb; &S74099_3(S740... 35 1.1
(Q9P2K3) RecName: Full=REST corepressor 3; &AB463216_1(AB463216... 35 1.1
AJ580807_1(AJ580807|pid:none) Homo sapiens mRNA for mutated in b... 35 1.1
AK302664_1(AK302664|pid:none) Homo sapiens cDNA FLJ56809 complet... 35 1.1
EF422871_1(EF422871|pid:none) Euplotes aediculatus EMYB2 (emyb2)... 35 1.1
AM910991_204(AM910991|pid:none) Plasmodium knowlesi strain H chr... 35 1.1
AL590101_2(AL590101|pid:none) Human DNA sequence from clone RP11... 35 1.1
QOYV(A36314;A90831;A94263;A01347)transforming protein myb - avia... 35 1.1
AK300942_1(AK300942|pid:none) Homo sapiens cDNA FLJ59439 complet... 35 1.1
BC169033_1(BC169033|pid:none) Rattus norvegicus REST corepressor... 35 1.1
EF676178_1(EF676178|pid:none) Picea sitchensis clone WS02717_G12... 35 1.5
M13138_2(M13138|pid:none) Mouse c-myb mRNA with Cas-BR-M viral g... 35 1.5
AP003607_7(AP003607|pid:none) Oryza sativa Japonica Group genomi... 35 1.5
U96090_1(U96090|pid:none) Strongylocentrotus purpuratus myb-rela... 35 1.5
X04099_1(X04099|pid:none) M.musculus c-myb oncogene, exon a (and... 35 1.5
AL023693_3(AL023693|pid:none) Human DNA sequence from clone RP1-... 35 1.5
NRL(1POM) C-myb proto-oncogene (dna-binding domain repeat 3) 35 1.5
DQ976501_1(DQ976501|pid:none) Gorilla gorilla MYB (MYB) gene, pa... 35 1.5
AF190303_1(AF190303|pid:none) Adiantum raddianum c-myb-like tran... 35 1.5
M13666_1(M13666|pid:none) Human c-myb mRNA, 3' end. 35 1.5
DQ822910_1(DQ822910|pid:none) Glycine max MYB transcription fact... 35 1.5
AP008207_1489(AP008207|pid:none) Oryza sativa (japonica cultivar... 35 1.5
AL590445_35(AL590445|pid:none) chromosome V of strain GB-M1 of E... 35 1.5
NRL(1MSEC) C-myb dna-binding domain complexed with dna (nmr, min... 35 1.5
AL023693_2(AL023693|pid:none) Human DNA sequence from clone RP1-... 35 1.5
AB056122_1(AB056122|pid:none) Nicotiana tabacum NtmybA1 mRNA for... 35 1.5
AJ630489_1(AJ630489|pid:none) Arabidopsis thaliana mRNA for hypo... 34 1.9
AY519652_1(AY519652|pid:none) Arabidopsis thaliana MYB transcrip... 34 1.9
AB020749_7(AB020749|pid:none) Arabidopsis thaliana genomic DNA, ... 34 1.9
AL050351_6(AL050351|pid:none) Arabidopsis thaliana DNA chromosom... 34 1.9
BT037984_1(BT037984|pid:none) Zea mays full-length cDNA clone ZM... 34 1.9
AC131239_17(AC131239|pid:none) Medicago truncatula clone mth2-18... 34 1.9
(Q03237) RecName: Full=Myb-related protein B; AltName: Full=B-My... 34 1.9
CU633876_92(CU633876|pid:none) Podospora anserina genomic DNA ch... 34 1.9
AK081684_1(AK081684|pid:none) Mus musculus 16 days embryo head c... 34 1.9
AC079890_14(AC079890|pid:none) Oryza sativa chromosome 10 BAC OS... 34 1.9
AB026295_29(AB026295|pid:none) Oryza sativa Japonica Group genom... 34 1.9
(Q69Z66) RecName: Full=Histone H2A deubiquitinase MYSM1; ... 34 1.9
AK241812_1(AK241812|pid:none) Oryza sativa Japonica Group cDNA, ... 34 1.9
AL606668_8(AL606668|pid:none) Oryza sativa genomic DNA, chromoso... 34 2.5
AM424678_5(AM424678|pid:none) Vitis vinifera contig VV78X203929.... 34 2.5
FN392319_1089(FN392319|pid:none) Pichia pastoris GS115 chromosom... 34 2.5
AM466384_2(AM466384|pid:none) Vitis vinifera contig VV78X097971.... 34 2.5
AB493466_1(AB493466|pid:none) Arabidopsis thaliana At1g18960 mRN... 34 2.5
EU966101_1(EU966101|pid:none) Zea mays clone 291733 DNA binding ... 34 2.5
BT062722_1(BT062722|pid:none) Zea mays full-length cDNA clone ZM... 34 2.5
AF189787_1(AF189787|pid:none) Hordeum vulgare putative c-myb-lik... 34 2.5
AY449461_7(AY449461|pid:none) Oikopleura dioica clone BACOIKO005... 33 3.2
AM450058_2(AM450058|pid:none) Vitis vinifera contig VV78X108547.... 33 3.2
AF189212_1(AF189212|pid:none) Arabidopsis thaliana putative c-my... 33 3.2
(Q9S7G7) RecName: Full=Myb-related protein 3R-1; AltName: Full=P... 33 3.2
DQ822969_1(DQ822969|pid:none) Glycine max MYB transcription fact... 33 3.2
AJ430053_1(AJ430053|pid:none) Oryza sativa myb3R1 gene for trans... 33 3.2
(Q5F3F2) RecName: Full=Histone H2A deubiquitinase MYSM1; ... 33 3.2
AL022537_7(AL022537|pid:none) Arabidopsis thaliana DNA chromosom... 33 3.2
AY648782_1(AY648782|pid:none) Danio rerio b-myb mRNA, complete c... 33 3.2
AC137611_7(AC137611|pid:none) Oryza sativa (japonica cultivar-gr... 33 3.2
EU971721_1(EU971721|pid:none) Zea mays clone 369608 unknown mRNA... 33 3.2
FB798659_1(FB798659|pid:none) Sequence 17932 from Patent WO20080... 33 3.2
AP008218_559(AP008218|pid:none) Oryza sativa (japonica cultivar-... 33 3.2
AJ430051_1(AJ430051|pid:none) Oryza sativa mRNA for transcriptio... 33 3.2
AC007070_18(AC007070|pid:none) Arabidopsis thaliana chromosome 2... 33 3.2
AP008207_551(AP008207|pid:none) Oryza sativa (japonica cultivar-... 33 3.2
FB926505_1(FB926505|pid:none) Sequence 145778 from Patent WO2008... 33 4.2
AY667452_1(AY667452|pid:none) Selaginella kraussiana PHANTASTICA... 33 4.2
(Q6P116) RecName: Full=REST corepressor 2; &BC065331_1(BC065331... 33 4.2
BT066620_1(BT066620|pid:none) Zea mays full-length cDNA clone ZM... 33 4.2
AE017348_21(AE017348|pid:none) Cryptococcus neoformans var. neof... 33 4.2
AF190309_1(AF190309|pid:none) Marchantia polymorpha c-myb-like t... 33 4.2
DQ356008_1(DQ356008|pid:none) Euplotes aediculatus EMYB3 (emyb3)... 33 4.2
CP001331_3(CP001331|pid:none) Micromonas sp. RCC299 chromosome 1... 33 4.2
AK067964_1(AK067964|pid:none) Oryza sativa Japonica Group cDNA c... 33 4.2
(Q05935) RecName: Full=Myb-related protein A; AltName: Full=A-My... 33 4.2
(Q6NRZ0) RecName: Full=REST corepressor 2; &BC070565_1(BC070565... 33 4.2
DQ323739_1(DQ323739|pid:none) Hevea brasiliensis MYB transcripti... 33 4.2
AJ133783_1(AJ133783|pid:none) Gallus gallus mRNA for TRF2 protei... 33 4.2
AE017352_3(AE017352|pid:none) Cryptococcus neoformans var. neofo... 33 4.2
DQ459071_13(DQ459071|pid:none) Sorghum bicolor cultivar BTx623 c... 33 4.2
AY973541_1(AY973541|pid:none) Hyaloperonospora parasitica isolat... 33 4.2
AY712938_1(AY712938|pid:none) Hevea brasiliensis MYB transcripti... 33 5.5
EU020322_1(EU020322|pid:none) Cypridopsis vidua clone Ost166f2 C... 33 5.5
FB926507_1(FB926507|pid:none) Sequence 145780 from Patent WO2008... 33 5.5
AE014298_2988(AE014298|pid:none) Drosophila melanogaster chromos... 33 5.5
AK118135_1(AK118135|pid:none) Arabidopsis thaliana At2g38090 mRN... 33 5.5
CR548612_430(CR548612|pid:none) Paramecium tetraurelia macronucl... 33 5.5
AP008208_2164(AP008208|pid:none) Oryza sativa (japonica cultivar... 33 5.5
CR382128_542(CR382128|pid:none) Yarrowia lipolytica strain CLIB1... 33 5.5
FB926513_1(FB926513|pid:none) Sequence 145786 from Patent WO2008... 33 5.5
EU971405_1(EU971405|pid:none) Zea mays clone 363908 DNA binding ... 33 5.5
BT023817_1(BT023817|pid:none) Drosophila melanogaster LD26250 fu... 33 5.5
FB926511_1(FB926511|pid:none) Sequence 145784 from Patent WO2008... 33 5.5
AP002743_24(AP002743|pid:none) Oryza sativa Japonica Group genom... 33 5.5
BT033986_1(BT033986|pid:none) Zea mays full-length cDNA clone ZM... 33 5.5
FB926565_1(FB926565|pid:none) Sequence 145838 from Patent WO2008... 33 5.5
EU162609_13(EU162609|pid:none) Cleome spinosa clone contig83 BAC... 33 5.5
AJ870304_1(AJ870304|pid:none) Cucumis sativus mRNA for putative ... 33 5.5
AC003028_2(AC003028|pid:none) Arabidopsis thaliana chromosome 2 ... 33 5.5
AY118507_1(AY118507|pid:none) Drosophila melanogaster LD11215 fu... 33 5.5
AF239956_1(AF239956|pid:none) Hevea brasiliensis unknown mRNA. ... 33 5.5
EF636819_1(EF636819|pid:none) Nicotiana langsdorffii x Nicotiana... 33 5.5
EU956859_1(EU956859|pid:none) Zea mays clone 1575939 MYB-like tr... 33 5.5
FB835186_1(FB835186|pid:none) Sequence 54459 from Patent WO20080... 33 5.5
FJ805315_1(FJ805315|pid:none) Heptacodium miconioides DIV3B (DIV... 32 7.2
AB006702_18(AB006702|pid:none) Arabidopsis thaliana genomic DNA,... 32 7.2
FJ805304_1(FJ805304|pid:none) Diervilla sessilifolia DIV3B prote... 32 7.2
CP000594_131(CP000594|pid:none) Ostreococcus lucimarinus CCE9901... 32 7.2
BC160584_1(BC160584|pid:none) Xenopus tropicalis REST corepresso... 32 7.2
AM478727_1(AM478727|pid:none) Vitis vinifera contig VV78X086495.... 32 7.2
AB005237_20(AB005237|pid:none) Arabidopsis thaliana genomic DNA,... 32 7.2
AF122053_1(AF122053|pid:none) Solanum tuberosum clone 14 tuber-s... 32 7.2
BC064495_1(BC064495|pid:none) Homo sapiens REST corepressor 1, m... 32 7.2
FB835194_1(FB835194|pid:none) Sequence 54467 from Patent WO20080... 32 7.2
CP000594_201(CP000594|pid:none) Ostreococcus lucimarinus CCE9901... 32 7.2
FM992688_866(FM992688|pid:none) Candida dubliniensis CD36 chromo... 32 7.2
AB093210_1(AB093210|pid:none) Mus musculus mRNA for mKIAA0071 pr... 32 7.2
BC042731_1(BC042731|pid:none) Mus musculus REST corepressor 1, m... 32 7.2
DQ822891_1(DQ822891|pid:none) Glycine max MYB transcription fact... 32 7.2
(Q869R9) RecName: Full=Myb-like protein J; &AC116957_56(AC11695... 32 7.2
DQ822929_1(DQ822929|pid:none) Glycine max MYB transcription fact... 32 7.2
(Q5APG6) RecName: Full=Pre-mRNA-splicing factor CEF1; 32 7.2
CU633899_191(CU633899|pid:none) Podospora anserina genomic DNA c... 32 7.2
CU928170_683(CU928170|pid:none) Kluyveromyces thermotolerans str... 32 7.2
(Q54TN2) RecName: Full=Myb-like protein C; 32 7.2
AF098507_1(AF098507|pid:none) Dictyostelium discoideum myb prote... 32 7.2
CR942498_1(CR942498|pid:none) Xenopus tropicalis finished cDNA, ... 32 7.2
FJ805311_1(FJ805311|pid:none) Heptacodium miconioides DIV1A (DIV... 32 9.4
EU971402_1(EU971402|pid:none) Zea mays clone 363860 unknown mRNA. 32 9.4
AL845481_8(AL845481|pid:none) Zebrafish DNA sequence from clone ... 32 9.4
AB018114_17(AB018114|pid:none) Arabidopsis thaliana genomic DNA,... 32 9.4
AL137189_19(AL137189|pid:none) Arabidopsis thaliana DNA chromoso... 32 9.4
DQ653111_1(DQ653111|pid:none) Arabidopsis thaliana clone 0000013... 32 9.4
AF334817_1(AF334817|pid:none) Arabidopsis thaliana putative tran... 32 9.4
AF190307_1(AF190307|pid:none) Adiantum raddianum c-myb-like tran... 32 9.4
DQ976638_1(DQ976638|pid:none) Ateles geoffroyi MYB (MYB) gene, p... 32 9.4
(Q54CT1) RecName: Full=Myb-like protein N; 32 9.4

>(Q54K19) RecName: Full=Myb-like protein D;
Length = 595

Score = 113 bits (283), Expect = 2e-24
Identities = 49/68 (72%), Positives = 57/68 (83%)
Frame = +1

Query: 19 KTGSRRNTLWTTEDDEKFAEAYNKYGKSWKTIHSHLPDKTREQVQSHGQYLIRIGKLQDL 198
K R+N +WT E+DEK A+ YNKYGKSWK IHSH DKTREQVQSHGQYLIRIGKL+D+
Sbjct: 434 KKKHRKNAIWTQEEDEKMAQLYNKYGKSWKAIHSHFDDKTREQVQSHGQYLIRIGKLEDI 493

Query: 199 HKDGRRTR 222
H+DGR+ R
Sbjct: 494 HRDGRKER 501

Lambda K H
0.315 0.133 0.412

Gapped
Lambda K H
0.267 0.0410 0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3236559
Number of Hits to DB: 414,558,112
Number of extensions: 6001389
Number of successful extensions: 17854
Number of sequences better than 10.0: 359
Number of HSP's gapped: 17810
Number of HSP's successfully gapped: 448
Length of query: 172
Length of database: 1,051,180,864
Length adjustment: 119
Effective length of query: 53
Effective length of database: 666,030,343
Effective search space: 35299608179
Effective search space used: 35299608179
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 30 (16.2 bits)

PSORT

psg: 0.61 gvh: 0.20 alm: 0.64 top: 0.53 tms: 0.00 mit: 0.44 mip: 0.03
nuc: 0.00 erl: 0.00 erm: 0.20 pox: 0.00 px2: 0.00 vac: 0.00 rnp: 0.00
act: 0.00 caa: 0.00 yqr: 0.00 tyr: 0.00 leu: 0.00 gpi: 0.00 myr: 0.00
dna: 0.00 rib: 0.00 bac: 0.00 m1a: 0.00 m1b: 0.00 m2 : 0.00 mNt: 0.00
m3a: 0.00 m3b: 0.00 m_ : 1.00

40.0 %: mitochondrial
32.0 %: nuclear
12.0 %: cytoskeletal
12.0 %: cytoplasmic
4.0 %: endoplasmic reticulum

>> prediction for Contig-U14235-1 is mit

VS (DIR, S) 0
VH (FL, L) 0
VF (FL, S) 0
AH (FL, L) 0
AF (FL, S) 0
SL (DIR, L) 0
SS (DIR, S) 0
SH (FL, L) 0
SF (FL, S) 0
CH (FL, L) 1
CF (FL, S) 0
FCL (DIR, L) 0
FC (DIR, S) 0
FC-IC (SUB) 0