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Dicty_cDB
Contig List | Clone List | cDNA Library List
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NBDC - LSDB Archive
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Dicty_cDB
Contig List | Clone List | cDNA Library List
Atlas
Atlas | Atlas Image List
Contig-U14181-1
Contig ID Contig-U14181-1
Contig update 2002.12.18
Contig sequence 
>Contig-U14181-1 (Contig-U14181-1Q) /CSM_Contig/Contig-U14181-1Q.Seq.d
GGATACTTTTTAATTATAAAAACTACTTTTCCATAACAATATTAATATTA
AAACAATGAACCAAGTTATACCAAATGATGTTTCATCAGTTTCATTAAAA
TTACAATCCGTTGATGATGGAAATGAGTATACTTCATCAAATAAGATCTT
CATCAAACTCACTATATCCATATTTTAATATTTAGTAATGAAAATTTATC
AACATTATATTATAGTCATGGACAACAACAACAACAACAACAACAACAAC
AACAACAGCAACAACAACAAAATAATCAAAATCATTTATATACACAATTA
CAACAATTACAACAAATACAACAATTTCAACAACAGGTACAATCAAATAA
TGAACCATTAATATTAAATATAGGTGGTTTCAAATTTTGTACTACAAAAG
GAACCTTAACAAATCAAAAAAATAATTACTTTGATATATTATTCTCTGGT
AATTATAATGTAAATGTAATCAAAACTCCAAATAAACCTGATACTTATTC
TTATTGATAGAGATGGTACACATTTTAGAATTATTTTAAATTTTTTAAGA
GGTGATTGTTCAAATATTCCAGAGTGTGAACAAATTAGAAATGAATTATA
TGTTGAAGCAGATTTTTATTGTTTATCAGGTTTAAAAGAATTGTTATATC
CATATCATTTTTATCAATCAAAAATTTTATCTGTTGAATTATCAAAAGAT
TTAATTAGATTATTAAAATCAAACATTACAAATTAAAAAAACAAGATTAT
TATATAGAGGATCAGATAATGATTTTTCATCAAAGAGATTTCATGAAATT
ATGTGATTTTAAAGGATCCACAATTACAATTATTAGATCAAAGGATTGTA
TATTTGGAGGATATGCAAGTCGTAATTGGACATTGTCTACCCAATATACT
CAAGATGATAAATCATTTTTATTTGATTTGGCAAATATACCACCATCAAT
TATAAAAAAAGAAGAAGGTTCATCAAGTCAATCAATTTATTCAAACATTA
ATTATGGTCCAACTTTTGGTATATTGGGTAAAAATTTAACAATTTCAAAT
AATTGTAATATAAATAAAGAGAATTTCTTTGAATCTTATTATGATAGTAA
AGGAAAAGGTAAAAGATATTTTCAAGTTGATGAATATGAAGTTTTTAAAA
TTGAATGTTAACATTAAATTTTGAAAAAAATAATAAATAAAAAATATATA
TATATTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAA
Gap no gap
Contig length 1253
Chromosome number (1..6, M) 4
Chromosome length 5430582
Start point 3740238
End point 3739019
Strand (PLUS/MINUS) MINUS
Number of clones 12
Number of EST 15
Link to clone list U14181
List of clone(s) 

est1=SFK467F,1,621
est2=CHE190F,21,581
est3=CFC308F,24,514
est4=CFF701E,25,1190
est5=SSH706F,30,348
est6=SFI477F,31,244
est7=SFI877F,112,215
est8=SSF765F,112,594
est9=CFI843Z,411,1173
est10=SFI877Z,475,1005
est11=SFI477Z,489,1208
est12=CFC308Z,495,1210
est13=CFC559Z,567,1176
est14=SSG557E,707,1250
est15=SSG621Z,802,1251
Translated Amino Acid sequence 
gyfliikttfp*qy*y*nnepsytk*cfisfikitir**wk*vyfik*dlhqthyihili
fsnenlstlyyshgqqqqqqqqqqqqqqqqnnqnhlytqlqqlqqiqqfqqqvqsnnepl
ilniggfkfcttkgtltnqknnyfdilfsgnynvnviktpnkpdtysy**rwytf*nyfk
ffkr*lfkysrv*tn*k*iic*srfllfirfkrivisisflsiknfic*iikrfn*IIKI
KHYKLKKQDYYIEDQIMIFHQRDFMKLCDFKGSTITIIRSKDCIFGGYASRNWTLSTQYT
QDDKSFLFDLANIPPSIIKKEEGSSSQSIYSNINYGPTFGILGKNLTISNNCNINKENFF
ESYYDSKGKGKRYFQVDEYEVFKIEC*h*ilkkiinkkyiyi*kkkkkkkkkkkkkk
Translated Amino Acid sequence (All Frames) 
Frame A:
gyfliikttfp*qy*y*nnepsytk*cfisfikitir**wk*vyfik*dlhqthyihili
fsnenlstlyyshgqqqqqqqqqqqqqqqqnnqnhlytqlqqlqqiqqfqqqvqsnnepl
ilniggfkfcttkgtltnqknnyfdilfsgnynvnviktpnkpdtysy**rwytf*nyfk
ffkr*lfkysrv*tn*k*iic*srfllfirfkrivisisflsiknfic*iikrfn*IIKI
KHYKLKKQDYYIEDQIMIFHQRDFMKLCDFKGSTITIIRSKDCIFGGYASRNWTLSTQYT
QDDKSFLFDLANIPPSIIKKEEGSSSQSIYSNINYGPTFGILGKNLTISNNCNINKENFF
ESYYDSKGKGKRYFQVDEYEVFKIEC*h*ilkkiinkkyiyi*kkkkkkkkkkkkkk


Frame B:
dtf*l*kllfhnniniktmnqvipndvssvslklqsvddgneytssnkifikltisif*y
lvmkiyqhyiivmdnnnnnnnnnnnsnnnkiikiiyihnynnynkynnfnnrynqimnh*
y*i*vvsnfvlqkep*qikkiitliyyslviim*m*sklqinlililidrdgthfriiln
flrgdcsnipeceqirnelyveadfyclsglkellypyhfyqskilsvelskdlirllks
nitn*knkiii*rir**ffikeis*nyvilkdpqlqlldqrivyledmqvvighclpnil
kminhfyliwqiyhhql*kkkkvhqvnqfiqtlimvqllvywvki*qfqiivi*ikrisl
nlimivkekvkdifklmnmkflklnvnikf*kk**ikniyifkkkkkkkkkkkkkkk


Frame C:
ilfnyknyfsitililkq*tklyqmmfhqfh*nynplmmemsilhqirsssnslypyfni
***kfiniil*swttttttttttttatttk*sksfiytittittnttisttgtik**tin
ikyrwfqilyykrnlnkskk*ll*yiilw*l*ckcnqnsk*t*ylflliemvhilelf*i
f*evivqifqsvnklemnymlkqifivyqv*kncyihiifinqkfyllnyqki*ldy*nq
tlqikktrllyrgsdndfsskrfheim*f*rihnyny*ikglyiwricks*ldivypiys
r**iifi*fgkyttinykkrrrfiksinlfkh*lwsnfwyig*kfnnfk*l*yk*refl*
ill***rkr*kifss**i*sf*n*mltlnfeknnk*kiyiylkkkkkkkkkkkkkkk
own update 2004. 6.10
Homology vs CSM-cDNA 
Query= Contig-U14181-1 (Contig-U14181-1Q)
/CSM_Contig/Contig-U14181-1Q.Seq.d
         (1253 letters)

Database: CSM
           6905 sequences; 5,674,871 total letters


                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

Contig-U14181-1 (Contig-U14181-1Q) /CSM_Contig/Conti...  1515  0.0
Contig-U05164-1 (Contig-U05164-1Q) /CSM_Contig/Conti...    40  0.006
Contig-U11942-1 (Contig-U11942-1Q) /CSM_Contig/Conti...    38  0.022
Contig-U09153-1 (Contig-U09153-1Q) /CSM_Contig/Conti...    38  0.022
Contig-U06467-1 (Contig-U06467-1Q) /CSM_Contig/Conti...    38  0.022
Contig-U01727-1 (Contig-U01727-1Q) /CSM_Contig/Conti...    38  0.022
Contig-U14701-1 (Contig-U14701-1Q) /CSM_Contig/Conti...    36  0.089
Contig-U14197-1 (Contig-U14197-1Q) /CSM_Contig/Conti...    36  0.089
Contig-U12075-1 (Contig-U12075-1Q) /CSM_Contig/Conti...    36  0.089
Contig-U11443-1 (Contig-U11443-1Q) /CSM_Contig/Conti...    36  0.089

>Contig-U14181-1 (Contig-U14181-1Q) /CSM_Contig/Contig-U14181-1Q.Seq.d
          Length = 1253

 Score = 1515 bits (764), Expect = 0.0
 Identities = 806/827 (97%)
 Strand = Plus / Plus

                                                                        
Query: 347  ataatgaaccattaatattaaatataggtggtttcaaattttgtactacaaaaggaacct 406
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 347  ataatgaaccattaatattaaatataggtggtttcaaattttgtactacaaaaggaacct 406

                                                                        
Query: 407  taacaaatcnnnnnnntaattactttgatatattattctctggtaattataatgtaaatg 466
            |||||||||       ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 407  taacaaatcaaaaaaataattactttgatatattattctctggtaattataatgtaaatg 466

                                                                        
Query: 467  taatcaaaactccaaataaacctgatacttattcttattgatagagatggtacacatttt 526
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 467  taatcaaaactccaaataaacctgatacttattcttattgatagagatggtacacatttt 526

                                                                        
Query: 527  agaattattttaaattttttaagaggtgattgttcaaatattccagagtgtgaacaaatt 586
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 527  agaattattttaaattttttaagaggtgattgttcaaatattccagagtgtgaacaaatt 586

                                                                        
Query: 587  agaaatgaattatatgttgaagcagatttttattgtttatcaggtttaaaagaattgtta 646
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 587  agaaatgaattatatgttgaagcagatttttattgtttatcaggtttaaaagaattgtta 646

                                                                        
Query: 647  tatccatatcatttttatcaatcaaaaattttatctgttgaattatcaaaagatttaatt 706
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 647  tatccatatcatttttatcaatcaaaaattttatctgttgaattatcaaaagatttaatt 706

                                                                        
Query: 707  agattattaaaatcaaacattacaaattnnnnnnncaagattattatatagaggatcaga 766
            ||||||||||||||||||||||||||||       |||||||||||||||||||||||||
Sbjct: 707  agattattaaaatcaaacattacaaattaaaaaaacaagattattatatagaggatcaga 766

                                                                        
Query: 767  taatgatttttcatcaaagagatttcatgaaattatgtgattttaaaggatccacaatta 826
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 767  taatgatttttcatcaaagagatttcatgaaattatgtgattttaaaggatccacaatta 826

                                                                        
Query: 827  caattattagatcaaaggattgtatatttggaggatatgcaagtcgtaattggacattgt 886
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 827  caattattagatcaaaggattgtatatttggaggatatgcaagtcgtaattggacattgt 886

                                                                        
Query: 887  ctacccaatatactcaagatgataaatcatttttatttgatttggcaaatataccaccat 946
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 887  ctacccaatatactcaagatgataaatcatttttatttgatttggcaaatataccaccat 946

                                                                        
Query: 947  caattatnnnnnnngaagaaggttcatcaagtcaatcaatttattcaaacattaattatg 1006
            |||||||       ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 947  caattataaaaaaagaagaaggttcatcaagtcaatcaatttattcaaacattaattatg 1006

                                                                        
Query: 1007 gtccaacttttggtatattgggtaaaaatttaacaatttcaaataattgtaatataaata 1066
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1007 gtccaacttttggtatattgggtaaaaatttaacaatttcaaataattgtaatataaata 1066

                                                                        
Query: 1067 aagagaatttctttgaatcttattatgatagtaaaggaaaaggtaaaagatattttcaag 1126
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1067 aagagaatttctttgaatcttattatgatagtaaaggaaaaggtaaaagatattttcaag 1126

                                                           
Query: 1127 ttgatgaatatgaagtttttaaaattgaatgttaacattaaattttg 1173
            |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1127 ttgatgaatatgaagtttttaaaattgaatgttaacattaaattttg 1173


 Score =  438 bits (221), Expect = e-123
 Identities = 221/221 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   ggatactttttaattataaaaactacttttccataacaatattaatattaaaacaatgaa 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   ggatactttttaattataaaaactacttttccataacaatattaatattaaaacaatgaa 60

                                                                       
Query: 61  ccaagttataccaaatgatgtttcatcagtttcattaaaattacaatccgttgatgatgg 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  ccaagttataccaaatgatgtttcatcagtttcattaaaattacaatccgttgatgatgg 120

                                                                       
Query: 121 aaatgagtatacttcatcaaataagatcttcatcaaactcactatatccatattttaata 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 aaatgagtatacttcatcaaataagatcttcatcaaactcactatatccatattttaata 180

                                                    
Query: 181 tttagtaatgaaaatttatcaacattatattatagtcatgg 221
           |||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tttagtaatgaaaatttatcaacattatattatagtcatgg 221


 Score = 38.2 bits (19), Expect = 0.022
 Identities = 28/31 (90%)
 Strand = Plus / Minus

                                           
Query: 1142 tttttaaaattgaatgttaacattaaatttt 1172
            |||| |||||| |||||||||||| ||||||
Sbjct: 1177 ttttcaaaatttaatgttaacattcaatttt 1147


>Contig-U05164-1 (Contig-U05164-1Q) /CSM_Contig/Contig-U05164-1Q.Seq.d
          Length = 450

 Score = 40.1 bits (20), Expect = 0.006
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 682 tgttgaattatcaaaagatttaat 705
           ||||||||||||||| ||||||||
Sbjct: 158 tgttgaattatcaaatgatttaat 135


>Contig-U11942-1 (Contig-U11942-1Q) /CSM_Contig/Contig-U11942-1Q.Seq.d
          Length = 1350

 Score = 38.2 bits (19), Expect = 0.022
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 354 accattaatattaaatata 372
           |||||||||||||||||||
Sbjct: 826 accattaatattaaatata 808


  Database: CSM
    Posted date:  Jun 9, 2004  7:35 PM
  Number of letters in database: 5,674,871
  Number of sequences in database:  6905
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 25,223
Number of Sequences: 6905
Number of extensions: 25223
Number of successful extensions: 3155
Number of sequences better than 10.0: 358
length of query: 1253
length of database: 5,674,871
effective HSP length: 16
effective length of query: 1237
effective length of database: 5,564,391
effective search space: 6883151667
effective search space used: 6883151667
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 15 (30.2 bits)
dna update 2008.12.19
Homology vs DNA 
Query= Contig-U14181-1 (Contig-U14181-1Q) /CSM_Contig/Contig-U14181-1Q.Seq.d
         (1253 letters)

Database: ddbj_A
           92,845,959 sequences; 95,242,211,685 total letters

Searching..................................................done

                                                             Score    E
Sequences producing significant alignments:                  (bits) Value  N

(BJ402741) Dictyostelium discoideum cDNA clone:dds17j20, 3' ...   442   0.0    4
(BJ375332) Dictyostelium discoideum cDNA clone:ddc18f12, 3' ...   442   0.0    6
(BJ373883) Dictyostelium discoideum cDNA clone:ddc5p01, 3' e...   442   0.0    4
(BJ374108) Dictyostelium discoideum cDNA clone:ddc6e15, 3' e...   420   0.0    3
(BJ372293) Dictyostelium discoideum cDNA clone:ddc12b01, 3' ...   414   0.0    5
(BJ390214) Dictyostelium discoideum cDNA clone:dds21f18, 5' ...   242   0.0    7
(BJ402968) Dictyostelium discoideum cDNA clone:dds18j20, 3' ...   452   0.0    4
(BJ364212) Dictyostelium discoideum cDNA clone:ddc30c23, 5' ...   238   0.0    6
(BJ358937) Dictyostelium discoideum cDNA clone:ddc12b01, 5' ...   212   0.0    6
(C89917) Dictyostelium discoideum slug cDNA, clone SSG621.        387   0.0    2
(BJ360262) Dictyostelium discoideum cDNA clone:ddc5p01, 5' e...   232   e-163  6
(AU073278) Dictyostelium discoideum slug cDNA, clone SSG557.      303   e-109  3
(C89869) Dictyostelium discoideum slug cDNA, clone SSG557.        389   e-103  1
(BJ389194) Dictyostelium discoideum cDNA clone:dds17j20, 5' ...    90   1e-65  4
(BJ389468) Dictyostelium discoideum cDNA clone:dds18j20, 5' ...   180   8e-41  1
(AC116984) Dictyostelium discoideum chromosome 2 map 2567470...    38   7e-08  18
(AL844509) Plasmodium falciparum chromosome 13.                    38   7e-06  21
(AF063866) Melanoplus sanguinipes entomopoxvirus, complete g...    34   1e-05  16
(CP000962) Clostridium botulinum A3 str. Loch Maree, complet...    44   2e-04  21
(AC116305) Dictyostelium discoideum chromosome 2 map 1005175...    38   0.001  21
(AF356600) Dictyostelium discoideum filament-interacting pro...    38   0.002  5
(CU469464) Candidatus Phytoplasma mali strain AT complete ch...    32   0.002  20
(AC116977) Dictyostelium discoideum chromosome 2 map 5515173...    34   0.002  15
(AJ011856) Saccharomyces cerevisiae complete mitochondrial g...    34   0.002  9
(CP000942) Ureaplasma parvum serovar 3 str. ATCC 27815, comp...    32   0.003  23
(AC117076) Dictyostelium discoideum chromosome 2 map 3323568...    42   0.005  8
(AL844507) Plasmodium falciparum chromosome 8.                     36   0.006  19
(AC116957) Dictyostelium discoideum chromosome 2 map 1685067...    38   0.007  18
(EU004203) Saccharomyces cerevisiae YJM789 mitochondrion, co...    34   0.018  9
(AL929354) Plasmodium falciparum strain 3D7, chromosome 5, s...    36   0.019  14
(CR382398) Plasmodium falciparum chromosome 6, complete sequ...    34   0.024  13
(AL929352) Plasmodium falciparum strain 3D7, chromosome 5, s...    30   0.027  17
(AC004688) Plasmodium falciparum chromosome 12 clone 3D7, **...    32   0.032  12
(AE014842) Plasmodium falciparum 3D7 chromosome 11 section 7...    38   0.035  12
(AE014843) Plasmodium falciparum 3D7 chromosome 11 section 8...    38   0.043  10
(AC005308) Plasmodium falciparum chromosome 12 clone 3D7, **...    32   0.047  12
(DQ870926) Bombus ignitus mitochondrion, complete genome.          34   0.070  6
(AF165818) Guillardia theta nucleomorph chromosome 1, comple...    30   0.077  15
(AE014821) Plasmodium falciparum 3D7 chromosome 14 section 6...    34   0.078  13
(Z97348) Plasmodium falciparum MAL3P1.                             36   0.086  9
(AE002148) Ureaplasma parvum serovar 3 str. ATCC 700970 sect...    34   0.095  6
(AC213090) Populus trichocarpa clone POP118-O19, complete se...    36   0.11   7
(AC117081) Dictyostelium discoideum chromosome 2 map 5862124...    30   0.11   13
(AE014840) Plasmodium falciparum 3D7 chromosome 11 section 5...    30   0.11   15
(BX511196) Zebrafish DNA sequence from clone RP71-14I8 in li...    42   0.12   8
(AC146856) Medicago truncatula clone mth2-16l23, complete se...    34   0.14   9
(EA102815) Sequence 198 from patent US 7195870.                    38   0.14   5
(AX346963) Sequence 2034 from Patent WO0200928.                    38   0.14   5
(AX344489) Sequence 336 from Patent WO0200926.                     38   0.14   5
(AX323804) Sequence 292 from Patent WO0192565.                     38   0.14   5
(AX278035) Sequence 198 from Patent WO0177375.                     38   0.14   5
(AC114263) Dictyostelium discoideum chromosome 2 map 215673-...    32   0.17   13
(AE015927) Clostridium tetani E88, complete genome.                36   0.17   18
(AX344565) Sequence 16 from Patent WO0200932.                      36   0.18   13
(AF211141) Carsonella ruddii natural-host Pachypsylla celtid...    44   0.20   3
(EI353630) GM_WBc0103M21.r GM_WBc Glycine max genomic clone ...    44   0.20   2
(AF039044) Caenorhabditis elegans cosmid F48G7, complete seq...    50   0.20   1
(AC006788) Caenorhabditis elegans clone Y49C4, *** SEQUENCIN...    50   0.20   1
(AC161605) Mus musculus BAC clone RP23-230N15 from chromosom...    38   0.22   10
(AC214860) Populus trichocarpa clone POP004-M19, complete se...    34   0.26   9
(EJ363293) 1092963695232 Global-Ocean-Sampling_GS-28-01-01-1...    44   0.26   2
(AC116963) Dictyostelium discoideum chromosome 2 map 4657875...    40   0.27   13
(AC187496) Rhesus macaque BAC clone CH250-63H12 from chromos...    36   0.28   6
(AC096668) Homo sapiens BAC clone RP11-379A23 from 2, comple...    46   0.30   2
(AL929355) Plasmodium falciparum strain 3D7, chromosome 9; s...    36   0.30   13
(AC116551) Dictyostelium discoideum chromosome 2 map complem...    36   0.30   12
(BX293980) Mycoplasma mycoides subsp. mycoides SC str. PG1, ...    34   0.30   20
(CP000263) Buchnera aphidicola str. Cc (Cinara cedri), compl...    34   0.32   15
(AC092716) Mus musculus chromosome 5, clone RP23-14J20, comp...    36   0.34   8
(AC189257) Brassica rapa subsp. pekinensis clone KBrB021I11,...    40   0.36   4
(CP000770) Candidatus Sulcia muelleri GWSS, complete genome.       30   0.38   14
(CE354568) tigr-gss-dog-17000361481431 Dog Library Canis lup...    36   0.40   3
(AC115592) Dictyostelium discoideum chromosome 2 map 1-12595...    34   0.41   10
(AX344550) Sequence 1 from Patent WO0200932.                       32   0.42   15
(AL844506) Plasmodium falciparum chromosome  7.                    34   0.44   16
(X66738) S.pombe cen1 central region centromere DNA.               36   0.47   5
(AC125474) Medicago truncatula clone mth2-16l11, complete se...    32   0.53   9
(AM443785) Vitis vinifera contig VV78X029792.14, whole genom...    36   0.56   6
(CR450811) Zebrafish DNA sequence *** SEQUENCING CANCELLED *...    36   0.57   9
(AE014829) Plasmodium falciparum 3D7 chromosome 10 section 1...    34   0.58   13
(AC005504) Plasmodium falciparum chromosome 12, *** SEQUENCI...    32   0.59   11
(AC188677) Pan troglodytes BAC clone CH251-468O4 from chromo...    42   0.63   7
(AM484461) Vitis vinifera contig VV78X063265.7, whole genome...    40   0.64   3
(AE014820) Plasmodium falciparum 3D7 chromosome 14 section 5...    36   0.64   12
(AE009951) Fusobacterium nucleatum subsp. nucleatum ATCC 255...    34   0.67   20
(FF777187) XABT77709.rev Gateway compatible cien cDNA librar...    38   0.68   2
(AC009415) Homo sapiens BAC clone RP11-576H9 from 7, complet...    36   0.71   7
(BD460624) Diagnosis of Diseases Associated with Cell Cycle.       38   0.73   4
(BD452546) Diagnosis of Diseases Associated with Cell Cycle.       38   0.73   4
(AX348897) Sequence 355 from Patent WO0202807.                     38   0.73   4
(AX252160) Sequence 421 from Patent WO0168911.                     38   0.73   4
(CP000743) Methanococcus aeolicus Nankai-3, complete genome.       34   0.74   19
(AC096192) Rattus norvegicus clone CH230-58F5, WORKING DRAFT...    32   0.78   9
(AE017263) Mesoplasma florum L1 complete genome.                   34   0.79   17
(AC160139) Mus musculus BAC clone RP23-93P8 from chromosome ...    48   0.81   1
(AC112956) Mus musculus chromosome 9, clone RP23-412P4, comp...    48   0.81   1
(AC016598) Homo sapiens chromosome 5 clone CTD-2050E21, comp...    48   0.81   1
(AC008645) Homo sapiens chromosome 5 clone CTB-181L5, comple...    48   0.81   1
(AC111136) Mus musculus chromosome 9 clone RP23-349C15 map 9...    48   0.81   1
(ED800822) MG__Ba0091K14r MG__Ba Mimulus guttatus genomic, g...    48   0.81   1

>(BJ402741) Dictyostelium discoideum cDNA clone:dds17j20, 3' end,
           single read.
          Length = 717

 Score =  442 bits (223), Expect(4) = 0.0
 Identities = 223/223 (100%)
 Strand = Plus / Minus


Query: 501 ttattgatagagatggtacacattttagaattattttaaattttttaagaggtgattgtt 560
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 707 ttattgatagagatggtacacattttagaattattttaaattttttaagaggtgattgtt 648


Query: 561 caaatattccagagtgtgaacaaattagaaatgaattatatgttgaagcagatttttatt 620
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 647 caaatattccagagtgtgaacaaattagaaatgaattatatgttgaagcagatttttatt 588


Query: 621 gtttatcaggtttaaaagaattgttatatccatatcatttttatcaatcaaaaattttat 680
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 587 gtttatcaggtttaaaagaattgttatatccatatcatttttatcaatcaaaaattttat 528


Query: 681 ctgttgaattatcaaaagatttaattagattattaaaatcaaa 723
           |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 527 ctgttgaattatcaaaagatttaattagattattaaaatcaaa 485

 Score =  410 bits (207), Expect(4) = 0.0
 Identities = 210/211 (99%)
 Strand = Plus / Minus


Query: 961  gaagaaggttcatcaagtcaatcaatttattcaaacattaattatggtccaacttttggt 1020
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 249  gaagaaggttcatcaagtcaatcaatttattcaaacattaattatggtccaacttttggt 190


Query: 1021 atattgggtaaaaatttaacaatttcaaataattgtaatataaataaagagaatttcttt 1080
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 189  atattgggtaaaaatttaacaatttcaaataattgtaatataaataaagagaatttcttt 130


Query: 1081 gaatcttattatgatagtaaaggaaaaggtaaaagatattttcaagttgatgaatatgaa 1140
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 129  gaatcttattatgatagtaaaggaaaaggtaaaagatattttcaagttgatgaatatgaa 70


Query: 1141 gtttttaaaattgaatgttaacattaaattt 1171
            ||||||||||||||||||||||| |||||||
Sbjct: 69   gtttttaaaattgaatgttaacaataaattt 39

 Score =  311 bits (157), Expect(4) = 0.0
 Identities = 157/157 (100%)
 Strand = Plus / Minus


Query: 797 aattatgtgattttaaaggatccacaattacaattattagatcaaaggattgtatatttg 856
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 413 aattatgtgattttaaaggatccacaattacaattattagatcaaaggattgtatatttg 354


Query: 857 gaggatatgcaagtcgtaattggacattgtctacccaatatactcaagatgataaatcat 916
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 353 gaggatatgcaagtcgtaattggacattgtctacccaatatactcaagatgataaatcat 294


Query: 917 ttttatttgatttggcaaatataccaccatcaattat 953
           |||||||||||||||||||||||||||||||||||||
Sbjct: 293 ttttatttgatttggcaaatataccaccatcaattat 257

 Score =  111 bits (56), Expect(4) = 0.0
 Identities = 56/56 (100%)
 Strand = Plus / Minus


Query: 742 caagattattatatagaggatcagataatgatttttcatcaaagagatttcatgaa 797
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 467 caagattattatatagaggatcagataatgatttttcatcaaagagatttcatgaa 412

Lambda     K      H
    1.37    0.711     1.31

Matrix: blastn matrix:1 -3
Number of Sequences: 92845959
Number of Hits to DB: 1,561,868,471
Number of extensions: 104736026
Number of successful extensions: 9740095
Number of sequences better than 10.0: 352
Length of query: 1253
Length of database: 95,242,211,685
Length adjustment: 24
Effective length of query: 1229
Effective length of database: 97,308,875,965
Effective search space: 119592608560985
Effective search space used: 119592608560985
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)
protein update 2009. 7.10
Homology vs Protein 
Query= Contig-U14181-1 (Contig-U14181-1Q) /CSM_Contig/Contig-U14181-1Q.Seq.d
         (1253 letters)

Database: nrp_B
           3,236,559 sequences; 1,051,180,864 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY232114_1(AY232114|pid:none) Drosophila yakuba clone yak-ad_CG1...    47   2e-07
EU643477_9(EU643477|pid:none) Adineta vaga clone Av_TEL_K_A retr...    55   7e-06
T25978(T25978)hypothetical protein ZC239.15 - Caenorhabditis ele...    51   7e-06
U80842_16(U80842|pid:none) Caenorhabditis elegans cosmid ZC239, ...    51   7e-06
AB017059_1(AB017059|pid:none) Arabidopsis thaliana genomic DNA, ...    42   9e-06
U80842_14(U80842|pid:none) Caenorhabditis elegans cosmid ZC239, ...    51   2e-05
T25976(T25976)hypothetical protein ZC239.14 - Caenorhabditis ele...    51   2e-05
AM910994_107(AM910994|pid:none) Plasmodium knowlesi strain H chr...    37   2e-05
(Q3URF8) RecName: Full=BTB/POZ domain-containing protein KCTD21;...    42   3e-05
BC139363_1(BC139363|pid:none) Mus musculus potassium channel tet...    42   3e-05
AY222912_1(AY222912|pid:none) Schistosoma japonicum clone ZZD125...    47   4e-05
AF099914_4(AF099914|pid:none) Caenorhabditis elegans cosmid C40A...    44   6e-05
T32065(T32065)hypothetical protein F22E5.8 - Caenorhabditis eleg...    47   6e-05
T25973(T25973)hypothetical protein ZC239.4 - Caenorhabditis eleg...    47   7e-05
FN376311_1(FN376311|pid:none) Schistosoma mansoni genome sequenc...    46   9e-05
FN317628_1(FN317628|pid:none) Schistosoma japonicum isolate Anhu...    46   9e-05
AY811378_1(AY811378|pid:none) Schistosoma japonicum SJCHGC05191 ...    46   1e-04
CS300501_1(CS300501|pid:none) Sequence 9 from Patent EP1661986.        44   1e-04
(Q7TPL3) RecName: Full=BTB/POZ domain-containing protein KCTD10;...    44   1e-04
BC148100_1(BC148100|pid:none) Bos taurus potassium channel tetra...    44   1e-04
AK222548_1(AK222548|pid:none) Homo sapiens mRNA for potassium ch...    44   1e-04
(Q9H3F6) RecName: Full=BTB/POZ domain-containing protein KCTD10;...    44   1e-04
AY597809_1(AY597809|pid:none) Homo sapiens chromosome 12 potassi...    44   1e-04
BC061457_1(BC061457|pid:none) Danio rerio potassium channel tetr...    44   2e-04
BC077866_1(BC077866|pid:none) Xenopus laevis potassium channel t...    44   2e-04
BT061214_1(BT061214|pid:none) Zea mays full-length cDNA clone ZM...    37   2e-04
(Q922M3) RecName: Full=BTB/POZ domain-containing protein KCTD10;...    43   3e-04
T33590(T33590)hypothetical protein C40A11.6 - Caenorhabditis ele...    43   3e-04
BT074760_1(BT074760|pid:none) Osmerus mordax clone omor-rgc-512-...    43   3e-04
T32070(T32070)hypothetical protein F22E5.6 - Caenorhabditis eleg...    44   3e-04
AF016681_9(AF016681|pid:none) Caenorhabditis elegans cosmid F22E...    44   3e-04
(Q8BGV7) RecName: Full=BTB/POZ domain-containing protein KCTD13;...    43   6e-04
AY027918_1(AY027918|pid:none) Homo sapiens TNFAIP1-like protein ...    43   6e-04
BC042482_1(BC042482|pid:none) Homo sapiens potassium channel tet...    42   7e-04
(Q96MP8) RecName: Full=BTB/POZ domain-containing protein KCTD7; ...    42   7e-04
(Q7TNY1) RecName: Full=BTB/POZ domain-containing protein TNFAIP1...    48   8e-04
BC134499_1(BC134499|pid:none) Bos taurus potassium channel tetra...    40   0.001
AK032314_1(AK032314|pid:none) Mus musculus adult male olfactory ...    38   0.001
(O70479) RecName: Full=BTB/POZ domain-containing protein TNFAIP1...    47   0.001
(Q8BJK1) RecName: Full=BTB/POZ domain-containing protein KCTD7; ...    40   0.002
AK029942_1(AK029942|pid:none) Mus musculus adult male testis cDN...    40   0.002
AK168386_1(AK168386|pid:none) Mus musculus 17 days pregnant adul...    47   0.002
(Q2T9W0) RecName: Full=BTB/POZ domain-containing protein KCTD13;...    41   0.002
T25972(T25972) hypothetical protein ZC239.5 - Caenorhabditis ele...    40   0.002
AY890894_1(AY890894|pid:none) Synthetic construct Homo sapiens c...    46   0.002
(Q5RBH4) RecName: Full=BTB/POZ domain-containing protein TNFAIP1...    46   0.002
A41784(A41784)tumor necrosis factor-alpha-induced protein B12 - ...    46   0.002
(Q13829) RecName: Full=BTB/POZ domain-containing protein TNFAIP1...    46   0.002
AB174517_1(AB174517|pid:none) Macaca fascicularis brain cDNA clo...    46   0.002
CR940347_731(CR940347|pid:none) Theileria annulata strain Ankara...    37   0.003
T20366(T20366) hypothetical protein D2045.8 - Caenorhabditis ele...    46   0.003
AK140606_1(AK140606|pid:none) Mus musculus 10 days neonate cereb...    40   0.003
AK017592_1(AK017592|pid:none) Mus musculus 8 days embryo whole b...    38   0.003
(Q9D7X1) RecName: Full=BTB/POZ domain-containing protein KCTD4; ...    38   0.003
(Q8WVF5) RecName: Full=BTB/POZ domain-containing protein KCTD4; ...    38   0.003
BC168135_1(BC168135|pid:none) Xenopus tropicalis cDNA clone MGC:...    35   0.004
AL031266_2(AL031266|pid:none) Caenorhabditis elegans Plasmid VM1...    37   0.004
AF099914_6(AF099914|pid:none) Caenorhabditis elegans cosmid C40A...    42   0.005
T26019(T26019)hypothetical protein VM106R.1 - Caenorhabditis ele...    37   0.005
T31922(T31922)hypothetical protein C17F4.4 - Caenorhabditis eleg...    45   0.005
(Q6DCX3) RecName: Full=BTB/POZ domain-containing protein kctd15;...    37   0.008
(Q8NC69) RecName: Full=BTB/POZ domain-containing protein KCTD6; ...    35   0.008
(Q8BNL5) RecName: Full=BTB/POZ domain-containing protein KCTD6; ...    34   0.008
BC158799_1(BC158799|pid:none) Rattus norvegicus potassium channe...    35   0.008
AY190924_1(AY190924|pid:none) Xenopus tropicalis CLLD4-like prot...    35   0.013
DQ213077_1(DQ213077|pid:none) Taeniopygia guttata clone 0058P000...    35   0.013
(Q6P3P4) RecName: Full=BTB/POZ domain-containing protein kctd15;...    37   0.013
(Q5EAX2) RecName: Full=BTB/POZ domain-containing protein TNFAIP1...    44   0.016
CR760702_1(CR760702|pid:none) Xenopus tropicalis finished cDNA, ...    44   0.016
AB056802_1(AB056802|pid:none) Macaca fascicularis brain cDNA clo...    44   0.016
T25980(T25980)hypothetical protein ZC239.17 - Caenorhabditis ele...    39   0.022
AK074934_1(AK074934|pid:none) Homo sapiens cDNA FLJ90453 fis, cl...    33   0.027
AF016666_4(AF016666|pid:none) Caenorhabditis elegans cosmid B028...    38   0.036
AF016666_3(AF016666|pid:none) Caenorhabditis elegans cosmid B028...    39   0.036
AF016666_2(AF016666|pid:none) Caenorhabditis elegans cosmid B028...    39   0.037
AY763407_1(AY763407|pid:none) Danio rerio leftover/righton-like ...    35   0.045
BC163138_1(BC163138|pid:none) Danio rerio potassium channel tetr...    35   0.045
BC166164_1(BC166164|pid:none) Xenopus tropicalis hypothetical pr...    36   0.046
BC155645_1(BC155645|pid:none) Danio rerio si:ch211-197g15.7, mRN...    42   0.060
BC163117_1(BC163117|pid:none) Danio rerio potassium channel tetr...    35   0.097
T32015(T32015;T32014)hypothetical protein K02F6.5 - Caenorhabdit...    37   0.098
AF016670_3(AF016670|pid:none) Caenorhabditis elegans cosmid K02F...    37   0.099
AF016670_4(AF016670|pid:none) Caenorhabditis elegans cosmid K02F...    37   0.099
EF086778_1(EF086778|pid:none) Picea sitchensis clone WS02751_I04...    41   0.10
BC168920_1(BC168920|pid:none) Rattus norvegicus potassium channe...    34   0.13
(Q5ZJX5) RecName: Full=TLD domain-containing protein KIAA1609 ho...    40   0.13
BC122284_1(BC122284|pid:none) Danio rerio potassium channel tetr...    40   0.13
BC154733_1(BC154733|pid:none) Danio rerio potassium channel tetr...    40   0.13
T24532(T24532) hypothetical protein T05E12.3 - Caenorhabditis el...    40   0.13
AF016681_6(AF016681|pid:none) Caenorhabditis elegans cosmid F22E...    40   0.13
BC157374_1(BC157374|pid:none) Danio rerio potassium channel tetr...    40   0.13
AL954739_1(AL954739|pid:none) Zebrafish DNA sequence from clone ...    35   0.16
AE014134_1321(AE014134|pid:none) Drosophila melanogaster chromos...    40   0.18
(Q1LWV7) RecName: Full=TLD domain-containing protein KIAA1609 ho...    40   0.18
AE014134_1322(AE014134|pid:none) Drosophila melanogaster chromos...    40   0.18
T25971(T25971)hypothetical protein ZC239.6 - Caenorhabditis eleg...    33   0.21
AY899808_1(AY899808|pid:none) Mus musculus potassium channel tet...    34   0.21
(Q8R4G8) RecName: Full=BTB/POZ domain-containing protein KCTD1; ...    34   0.21
(Q5M956) RecName: Full=BTB/POZ domain-containing protein KCTD1; ...    34   0.21
U80842_9(U80842|pid:none) Caenorhabditis elegans cosmid ZC239, c...    33   0.21
(Q5XJ34) RecName: Full=BTB/POZ domain-containing protein kctd15-...    33   0.21
BX649327_11(BX649327|pid:none) Zebrafish DNA sequence from clone...    40   0.23
(Q6DDZ9) RecName: Full=TLD domain-containing protein KIAA1609 ho...    40   0.23
U80842_18(U80842|pid:none) Caenorhabditis elegans cosmid ZC239, ...    39   0.30
BC124820_1(BC124820|pid:none) Danio rerio similar to interferon-...    39   0.39
BC079768_1(BC079768|pid:none) Xenopus laevis MGC86234 protein, m...    30   0.42
(Q0VD00) RecName: Full=BTB/POZ domain-containing protein KCTD15;...    32   0.45
EF043041_1(EF043041|pid:none) Rattus norvegicus potassium channe...    38   0.67
AK045439_1(AK045439|pid:none) Mus musculus adult male corpora qu...    38   0.87
AK043351_1(AK043351|pid:none) Mus musculus 7 days neonate cerebe...    38   0.87
(Q50H33) RecName: Full=BTB/POZ domain-containing protein KCTD8; ...    38   0.87
AK039167_1(AK039167|pid:none) Mus musculus adult male hypothalam...    38   0.87
BC022855_1(BC022855|pid:none) Homo sapiens SH3KBP1 binding prote...    30   0.91
(Q8TBC3) RecName: Full=SH3KBP1-binding protein 1;  &AF258553_1(A...    30   0.91
AK312748_1(AK312748|pid:none) Homo sapiens cDNA, FLJ93157, highl...    30   0.91
(Q6P7W2) RecName: Full=SH3KBP1-binding protein 1; AltName: Full=...    30   0.91
(P0C5J9) RecName: Full=SH3KBP1-binding protein 1; AltName: Full=...    30   0.91
AK075057_1(AK075057|pid:none) Homo sapiens cDNA FLJ90576 fis, cl...    30   0.96
AK294543_1(AK294543|pid:none) Homo sapiens cDNA FLJ61112 complet...    32   0.97
BC154159_1(BC154159|pid:none) Danio rerio potassium channel tetr...    34   0.97
AY763411_1(AY763411|pid:none) Danio rerio righton (ron) mRNA, co...    34   0.97
(Q6DG99) RecName: Full=BTB/POZ domain-containing protein KCTD6; ...    37   1.1
AE014297_2998(AE014297|pid:none) Drosophila melanogaster chromos...    37   1.1
BT046339_1(BT046339|pid:none) Salmo salar clone ssal-evf-544-203...    37   1.1
BT074784_1(BT074784|pid:none) Osmerus mordax clone omor-rgc-502-...    37   1.1
AF022982_3(AF022982|pid:none) Caenorhabditis elegans cosmid T23B...    29   1.2
AL845481_3(AL845481|pid:none) Zebrafish DNA sequence from clone ...    30   1.3
AB046829_1(AB046829|pid:none) Homo sapiens mRNA for KIAA1609 pro...    37   1.5
AB384249_1(AB384249|pid:none) Synthetic construct DNA, clone: pF...    37   1.5
AK291237_1(AK291237|pid:none) Homo sapiens cDNA FLJ75055 complet...    37   1.5
(Q6ZWB6) RecName: Full=BTB/POZ domain-containing protein KCTD8; ...    37   1.5
BX649327_12(BX649327|pid:none) Zebrafish DNA sequence from clone...    37   1.5
(Q6P9B6) RecName: Full=TLD domain-containing protein KIAA1609;  ...    37   1.5
AK300132_1(AK300132|pid:none) Homo sapiens cDNA FLJ59753 complet...    37   1.5
BC162772_1(BC162772|pid:none) Danio rerio potassium channel tetr...    34   1.6
BC074061_1(BC074061|pid:none) Danio rerio zgc:92463, mRNA (cDNA ...    37   1.9
BX649457_4(BX649457|pid:none) Zebrafish DNA sequence from clone ...    37   1.9
(Q8N5Z5) RecName: Full=BTB/POZ domain-containing protein KCTD17;...    29   2.0
BC031038_1(BC031038|pid:none) Homo sapiens potassium channel tet...    29   2.1
AL022314_2(AL022314|pid:none) Human DNA sequence from clone RP5-...    29   2.1
BC001185_1(BC001185|pid:none) Homo sapiens potassium channel tet...    32   2.1
BC145799_1(BC145799|pid:none) Mus musculus potassium channel tet...    29   2.1
BC134646_1(BC134646|pid:none) Bos taurus potassium channel tetra...    29   2.1
FJ392642_1(FJ392642|pid:none) Danio rerio potassium channel tetr...    36   2.5
(Q5DTY9) RecName: Full=BTB/POZ domain-containing protein KCTD16;       36   2.5
AY763408_1(AY763408|pid:none) Danio rerio leftover/righton-like ...    36   2.5
AF016681_7(AF016681|pid:none) Caenorhabditis elegans cosmid F22E...    36   3.3
CR381630_3(CR381630|pid:none) Zebrafish DNA sequence from clone ...    30   4.2
AM494955_54(AM494955|pid:none) Leishmania braziliensis chromosom...    35   4.3
AB168208_1(AB168208|pid:none) Macaca fascicularis testis cDNA cl...    35   4.3
CR940353_503(CR940353|pid:none) Theileria annulata strain Ankara...    35   4.3
(Q863D4) RecName: Full=Putative potassium channel regulatory pro...    35   4.3
AB249773_1(AB249773|pid:none) Xenopus (Silurana) tropicalis gene...    35   5.6
AK145279_1(AK145279|pid:none) Mus musculus mammary gland RCB-052...    30   5.8
AL627096_7(AL627096|pid:none) Mouse DNA sequence from clone RP23...    30   7.2
AL137060_5(AL137060|pid:none) Human DNA sequence from clone RP11...    35   7.4
(Q8K485) RecName: Full=BTB/POZ domain-containing protein KCTD11;...    35   7.4
(Q693B1) RecName: Full=BTB/POZ domain-containing protein KCTD11;...    35   7.4
(Q8N5I3) RecName: Full=Putative potassium channel regulatory pro...    35   7.4
(Q09389) RecName: Full=Uncharacterized protein F47D12.3;  &A8847...    35   7.4
AL832695_1(AL832695|pid:none) Homo sapiens mRNA; cDNA DKFZp313I0...    35   7.4
AL627096_8(AL627096|pid:none) Mouse DNA sequence from clone RP23...    30   7.4
D79998_1(D79998|pid:none) Homo sapiens KIAA0176 mRNA, complete c...    30   7.4
AL627096_6(AL627096|pid:none) Mouse DNA sequence from clone RP23...    30   7.4
BC160142_1(BC160142|pid:none) Synthetic construct Homo sapiens c...    30   7.4
BT045795_1(BT045795|pid:none) Salmo salar clone ssal-rgf-531-214...    34   9.6
BX470229_5(BX470229|pid:none) Zebrafish DNA sequence from clone ...    34   9.6
T25974(T25974) hypothetical protein ZC239.3 - Caenorhabditis ele...    34   9.6

>AY232114_1(AY232114|pid:none) Drosophila yakuba clone
           yak-ad_CG10465 mRNA sequence.
          Length = 192

 Score = 47.0 bits (110), Expect(2) = 2e-07
 Identities = 24/46 (52%), Positives = 29/46 (63%)
 Frame = +2

Query: 497 ILIDRDGTHFRIILNFLRGDCSNIPECEQIRNELYVEADFYCLSGL 634
           ILIDR G HF IILNFLR     +PE  +   EL  EA +YC++ L
Sbjct: 63  ILIDRCGNHFGIILNFLRDGTVPLPETNREIAELLAEAKYYCITEL 108

 Score = 32.3 bits (72), Expect(2) = 2e-07
 Identities = 15/39 (38%), Positives = 22/39 (56%)
 Frame = +1

Query: 346 NNEPLILNIGGFKFCTTKGTLTNQKNNYFDILFSGNYNV 462
           +++ L LN+GG  + TT GTLT   +     +FSG   V
Sbjct: 17  SSQYLKLNVGGHLYYTTIGTLTKNNDTMLSAMFSGRMEV 55

Lambda     K      H
   0.318    0.134    0.401

Gapped
Lambda     K      H
   0.267   0.0410    0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3236559
Number of Hits to DB: 1,459,771,987
Number of extensions: 24268432
Number of successful extensions: 56777
Number of sequences better than 10.0: 168
Number of HSP's gapped: 56756
Number of HSP's successfully gapped: 271
Length of query: 417
Length of database: 1,051,180,864
Length adjustment: 131
Effective length of query: 286
Effective length of database: 627,191,635
Effective search space: 179376807610
Effective search space used: 179376807610
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)
PSORT 

 psg: 0.41  gvh: 0.37  alm: 0.53  top: 0.53  tms: 0.00  mit: 0.17  mip: 0.00
 nuc: 0.00  erl: 0.00  erm: 0.20  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 1.00 

	 56.0 %: cytoplasmic
	 28.0 %: nuclear
	 12.0 %: mitochondrial
	  4.0 %: cytoskeletal

>> prediction for Contig-U14181-1 is cyt
VS (DIR, S) 0
VH (FL, L) 0
VF (FL, S) 0
AH (FL, L) 0
AF (FL, S) 0
SL (DIR, L) 0
SS (DIR, S) 4
SH (FL, L) 0
SF (FL, S) 3
CH (FL, L) 1
CF (FL, S) 4
FCL (DIR, L) 0
FC (DIR, S) 0
FC-IC (SUB) 0