Contig-U14168-1 |
Contig ID |
Contig-U14168-1 |
Contig update |
2002.12.18 |
Contig sequence |
|
Gap |
no gap |
Contig length |
1181 |
Chromosome number (1..6, M) |
2 |
Chromosome length |
8467578 |
Start point |
1091788 |
End point |
1092924 |
Strand (PLUS/MINUS) |
PLUS |
Number of clones |
18 |
Number of EST |
21 |
Link to clone list |
U14168 |
List of clone(s) |
|
Translated Amino Acid sequence |
|
Translated Amino Acid sequence (All Frames) |
|
own update |
2004. 6.10 |
Homology vs CSM-cDNA |
|
dna update |
2008.12.18 |
Homology vs DNA |
Query= Contig-U14168-1 (Contig-U14168-1Q) /CSM_Contig/Contig-U14168-1Q.Seq.d (1181 letters)
Database: ddbj_A 92,845,959 sequences; 95,242,211,685 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value N
(AU261821) Dictyostelium discoideum vegetative cDNA clone:VS... 999 0.0 2 (AC115599) Dictyostelium discoideum chromosome 2 map 4229098... 420 0.0 7 (BJ400656) Dictyostelium discoideum cDNA clone:dds14n04, 3' ... 991 0.0 1 (BJ432121) Dictyostelium discoideum cDNA clone:ddv17p16, 3' ... 963 0.0 1 (BJ397998) Dictyostelium discoideum cDNA clone:dds10g14, 3' ... 950 0.0 1 (BJ400236) Dictyostelium discoideum cDNA clone:dds9j12, 3' e... 878 0.0 2 (BJ376344) Dictyostelium discoideum cDNA clone:ddc28k06, 3' ... 932 0.0 1 (BJ398345) Dictyostelium discoideum cDNA clone:dds12h05, 3' ... 930 0.0 1 (BJ398344) Dictyostelium discoideum cDNA clone:dds12h04, 3' ... 928 0.0 1 (BJ373020) Dictyostelium discoideum cDNA clone:ddc15j10, 3' ... 924 0.0 1 (AU262636) Dictyostelium discoideum vegetative cDNA clone:VS... 833 0.0 2 (BJ373305) Dictyostelium discoideum cDNA clone:ddc2l13, 3' e... 591 0.0 3 (BJ372644) Dictyostelium discoideum cDNA clone:ddc13d13, 3' ... 821 0.0 1 (AU037027) Dictyostelium discoideum slug cDNA, clone SSA774. 444 0.0 9 (BJ398289) Dictyostelium discoideum cDNA clone:dds11h21, 3' ... 761 0.0 1 (BJ399588) Dictyostelium discoideum cDNA clone:dds6j16, 3' e... 694 0.0 1 (BJ359811) Dictyostelium discoideum cDNA clone:ddc2l13, 5' e... 529 0.0 3 (BJ374527) Dictyostelium discoideum cDNA clone:ddc8n10, 3' e... 553 e-153 1 (BJ413634) Dictyostelium discoideum cDNA clone:ddv16o07, 5' ... 343 9e-90 1 (EH015459) USDA-FP_182406 Lysiphlebus testaceipes adult whol... 214 2e-66 2 (C90837) Dictyostelium discoideum slug cDNA, clone SSJ211. 143 2e-64 3 (AY160096) Dictyostelium discoideum nucleotide exchange fact... 137 3e-57 3 (BI507335) BB170003A20A10.5 Bee Brain Normalized/Subtracted ... 159 5e-42 2 (BI504037) BB170029B20A11.5 Bee Brain Normalized/Subtracted ... 159 5e-42 2 (BI507360) BB170006B10A10.5 Bee Brain Normalized/Subtracted ... 159 5e-42 2 (DC448197) Gryllus bimaculatus mRNA, clone:GBpAP010_N02, uns... 92 3e-38 4 (BJ359562) Dictyostelium discoideum cDNA clone:ddc15j10, 5' ... 170 8e-38 1 (DC442388) Gryllus bimaculatus mRNA, clone:GB00364-42_G01, 5... 92 2e-35 4 (CV181104) tai68h01.y2 Hydra EST UCI 5 ALP Hydra magnipapill... 125 3e-33 2 (CN558848) tad76h02.y1 Hydra EST Darmstadt I Hydra magnipapi... 125 4e-33 2 (CF777271) tad08c12.y1 Hydra EST -IV Hydra magnipapillata cD... 125 4e-33 2 (CF601565) tac31b04.y1 Hydra EST -IV Hydra magnipapillata cD... 125 4e-33 2 (DN244745) ACAE-aaa23c22.g1 Hydra EST UCI 5 Hydra magnipapil... 125 4e-33 2 (DN137801) ACAE-aaa09j08.g1 Hydra EST UCI 5 Hydra magnipapil... 125 4e-33 2 (DT621130) ACAH-aaa63h11.g1 Hydra_EST_UCI-10 Hydra magnipapi... 125 4e-33 2 (CX056202) tai96e12.y2 Hydra EST UCI 5 ALP Hydra magnipapill... 125 4e-33 2 (EY187162) 1_D12_SEQ_SQ1300_08 Microctonus hyperodae venom c... 82 2e-31 3 (EY187561) 1_G09_SEQ_SQ1303_13 Microctonus hyperodae venom c... 82 2e-31 3 (BG661487) kx02e06.y1 Parastrongyloides trichosuri IL SL1 TO... 100 1e-29 2 (AA048654) mj33e03.r1 Soares mouse embryo NbME13.5 14.5 Mus ... 111 7e-28 3 (CG643179) OST381336 Mus musculus 129Sv/Ev Mus musculus cDNA... 111 8e-28 3 (AA144376) mr15c10.r1 Soares mouse 3NbMS Mus musculus cDNA c... 111 8e-28 3 (DD013640) METHOD FOR EXAMINING ISCHEMIC CONDITIONS. 111 9e-28 3 (AX305550) Sequence 301 from Patent WO0188188. 111 9e-28 3 (W89699) mf79h10.r1 Soares mouse embryo NbME13.5 14.5 Mus mu... 111 9e-28 3 (BM125693) id74b03.y1 Melton Normalized Mixed Mouse Pancreas... 111 9e-28 3 (CK333301) H8237F10-5 NIA Mouse Unique Gene Set Version 2 Mu... 111 1e-27 3 (CK333276) H8236F10-5 NIA Mouse Unique Gene Set Version 2 Mu... 111 1e-27 3 (CK616707) ou24f04.y1 Mouse lacrimal gland, unamplified: ou ... 111 1e-27 3 (AB232593) Mus musculus mRNA for Rab5A, complete cds. 111 1e-27 3 (CF169497) B0814E07-5 NIA Mouse Newborn Kidney cDNA Library ... 111 1e-27 3 (CD807672) UI-M-GW0-cip-b-12-0-UI.r1 NIH_BMAP_GW0 Mus muscul... 111 1e-27 3 (BI652456) 603299542F1 NCI_CGAP_Mam3 Mus musculus cDNA clone... 111 1e-27 3 (CD354459) UI-M-GM0-cgd-e-10-0-UI.r1 NIH_BMAP_GM0 Mus muscul... 111 2e-27 3 (AA824008) vq93f09.r1 Knowles Solter mouse blastocyst B3 Mus... 111 2e-27 3 (BG292781) 602389467F1 NIH_MGC_94 Mus musculus cDNA clone IM... 111 3e-27 3 (BJ414002) Dictyostelium discoideum cDNA clone:ddv17p16, 5' ... 84 3e-27 2 (BJ388401) Dictyostelium discoideum cDNA clone:dds9j12, 5' e... 84 3e-27 2 (AK008198) Mus musculus adult male small intestine cDNA, RIK... 111 4e-27 3 (BQ938862) AGENCOURT_8949616 NCI_CGAP_Co24 Mus musculus cDNA... 111 9e-27 3 (BC034370) Mus musculus RAB5A, member RAS oncogene family, m... 111 1e-26 3 (AK076093) Mus musculus 10, 11 days embryo whole body cDNA, ... 111 1e-26 3 (AK159706) Mus musculus osteoclast-like cell cDNA, RIKEN ful... 111 1e-26 3 (AK150346) Mus musculus bone marrow macrophage cDNA, RIKEN f... 111 1e-26 3 (AK153131) Mus musculus bone marrow macrophage cDNA, RIKEN f... 111 1e-26 3 (AK151066) Mus musculus bone marrow macrophage cDNA, RIKEN f... 111 1e-26 3 (AK150296) Mus musculus bone marrow macrophage cDNA, RIKEN f... 111 1e-26 3 (AK150405) Mus musculus bone marrow macrophage cDNA, RIKEN f... 111 1e-26 3 (AK010495) Mus musculus ES cells cDNA, RIKEN full-length enr... 111 1e-26 3 (BC004842) Mus musculus RAB5A, member RAS oncogene family, m... 111 1e-26 3 (BC096481) Mus musculus RAB5A, member RAS oncogene family, m... 111 1e-26 3 (AK081999) Mus musculus 16 days embryo head cDNA, RIKEN full... 111 2e-26 3 (BQ887682) AGENCOURT_8765354 NIH_MGC_129 Mus musculus cDNA c... 111 2e-25 2 (CX759983) AGENCOURT_41351992 NIH_MGC_278 Homo sapiens cDNA ... 111 2e-25 2 (BI158375) 602921068F1 NCI_CGAP_Mam3 Mus musculus cDNA clone... 111 2e-25 2 (BY708856) Mus musculus adult male stomach cDNA, RIKEN full-... 111 2e-25 2 (BY708152) Mus musculus adult male small intestine cDNA, RIK... 111 2e-25 2 (CN707494) E0533A01-5 NIA Mouse eight-cell-Embryo cDNA libra... 111 2e-25 2 (CN714592) E0638F05-5 NIA Mouse eight-cell-Embryo cDNA libra... 111 2e-25 2 (CG649196) OST403968 Mus musculus 129Sv/Ev Mus musculus cDNA... 111 2e-25 2 (CG622071) OST321195 Mus musculus 129Sv/Ev Mus musculus cDNA... 111 2e-25 2 (CK338366) C0629D01-5N NIA Mouse Trophoblast Stem Cell cDNA ... 111 2e-25 3 (DN292474) PL030010B20F06 cDNA from sexually mature hermapho... 127 1e-24 1 (AK002631) Mus musculus adult male kidney cDNA, RIKEN full-l... 111 3e-24 3 (AC131785) Mus musculus BAC clone RP24-397D13 from chromosom... 111 6e-24 4 (CG558780) OST176719 Mus musculus 129Sv/Ev Mus musculus cDNA... 111 1e-23 2 (BY703138) Mus musculus adult male kidney cDNA, RIKEN full-l... 111 4e-23 2 (CX225382) MBM00816 Mus Musculus hematopoietic BM-HPC5 cDNA ... 103 4e-23 2 (AA789672) vw62e07.r1 Soares_mammary_gland_NMLMG Mus musculu... 111 4e-23 2 (AC165960) Mus musculus BAC clone RP23-395M20 from chromosom... 111 8e-23 3 (FK218194) XABT222342.b1 Gateway compatible cien cDNA librar... 62 1e-22 4 (FF697167) XABT107635.fwd Gateway compatible cien cDNA libra... 62 1e-22 4 (DW014391) w8c4_M13F Myzus persicae, tobacco lineage, whole ... 119 2e-22 2 (CG655882) OST427098 Mus musculus 129Sv/Ev Mus musculus cDNA... 105 6e-22 2 (AF072935) Rattus norvegicus small GTP-binding protein rab5 ... 92 8e-22 3 (DJ005498) Primary rat hepatocyte toxicity modeling. 92 8e-22 3 (DD270096) Molecular Hepatotoxicology Modeling. 92 8e-22 3 (CK365863) AGENCOURT_17152294 NIH_MGC_231 Rattus norvegicus ... 92 1e-21 3 (FK228004) XABT229147.b1 Gateway compatible cien cDNA librar... 54 1e-21 5 (BP013700) Ciona intestinalis cDNA, clone:ciad57p11, 5' end,... 54 1e-21 5
>(AU261821) Dictyostelium discoideum vegetative cDNA clone:VSB109, 3' end single read. Length = 658
Score = 999 bits (504), Expect(2) = 0.0 Identities = 504/504 (100%) Strand = Plus / Plus
Query: 214 aaaatgaataataataataagatatttcaatttaaacttgtattattgggcgaagcagcc 273 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 aaaatgaataataataataagatatttcaatttaaacttgtattattgggcgaagcagcc 60
Query: 274 gtaggcaaaagttctttagtattgagatttgttcgtggacactttttagattatcaagaa 333 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 gtaggcaaaagttctttagtattgagatttgttcgtggacactttttagattatcaagaa 120
Query: 334 agtactataggtgctgcatttttagcacaaacagtttgtttaaatgatactacagttaaa 393 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 agtactataggtgctgcatttttagcacaaacagtttgtttaaatgatactacagttaaa 180
Query: 394 tttgaaatttgggatacagctggtcaagaacgttatcatacattagcaccaatgtattat 453 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 tttgaaatttgggatacagctggtcaagaacgttatcatacattagcaccaatgtattat 240
Query: 454 cgtggtgcacaagcagcaatcgttgtttatgatattagaagtgaagattcattcgaaaga 513 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 cgtggtgcacaagcagcaatcgttgtttatgatattagaagtgaagattcattcgaaaga 300
Query: 514 gcaatcaaatgggttaaagaattacaaagacaaggtagtccaaatattgttatagcatta 573 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 gcaatcaaatgggttaaagaattacaaagacaaggtagtccaaatattgttatagcatta 360
Query: 574 gcaggtaataaattagatcttgctgctaaacgtaaagttgaaacagctgaagcacaacaa 633 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 gcaggtaataaattagatcttgctgctaaacgtaaagttgaaacagctgaagcacaacaa 420
Query: 634 tatgccgaagaaaatggacttctttttatggaaacatcagccaaaacatcacaaaatgta 693 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 421 tatgccgaagaaaatggacttctttttatggaaacatcagccaaaacatcacaaaatgta 480
Query: 694 aatgaactttttgtagagattgct 717 |||||||||||||||||||||||| Sbjct: 481 aatgaactttttgtagagattgct 504
Score = 107 bits (54), Expect(2) = 0.0 Identities = 69/74 (93%) Strand = Plus / Plus
Query: 725 cttcccaaaaccccaaccacttgaccaggttcaggaagggttgcaattgctccaatagat 784 ||||| ||||| ||||||||| |||||||||||||||| || |||||||||||||||||| Sbjct: 511 cttccaaaaacaccaaccactagaccaggttcaggaagagtagcaattgctccaatagat 570
Query: 785 aatggtaacactgg 798 |||||||||||||| Sbjct: 571 aatggtaacactgg 584
Lambda K H 1.37 0.711 1.31
Matrix: blastn matrix:1 -3 Number of Sequences: 92845959 Number of Hits to DB: 901,936,057 Number of extensions: 62890778 Number of successful extensions: 8089628 Number of sequences better than 10.0: 3895 Length of query: 1181 Length of database: 95,242,211,685 Length adjustment: 24 Effective length of query: 1157 Effective length of database: 97,308,875,965 Effective search space: 112586369491505 Effective search space used: 112586369491505 X1: 11 (21.8 bits) S2: 22 (44.1 bits)
|
protein update |
2009. 7.10 |
Homology vs Protein |
Query= Contig-U14168-1 (Contig-U14168-1Q) /CSM_Contig/Contig-U14168-1Q.Seq.d (1181 letters)
Database: nrp_B 3,236,559 sequences; 1,051,180,864 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
(Q86JP3) RecName: Full=Ras-related protein Rab-5A; &AC115599_18... 334 4e-91 (Q06AU6) RecName: Full=Ras-related protein Rab-5A; &DQ917629_1(... 268 2e-70 (Q58DS9) RecName: Full=Ras-related protein Rab-5C; &BC118226_1(... 268 3e-70 AF072935_1(AF072935|pid:none) Rattus norvegicus small GTP-bindin... 268 3e-70 (Q0IIG7) RecName: Full=Ras-related protein Rab-5A; &BC122651_1(... 268 4e-70 (P18066) RecName: Full=Ras-related protein Rab-5A; &(P61271) Re... 268 4e-70 (P20339) RecName: Full=Ras-related protein Rab-5A; &AF464088_1(... 268 4e-70 I38703(I38703;G01590) ras-related small GTP binding protein Rab5... 267 6e-70 BT044620_1(BT044620|pid:none) Salmo salar clone ssal-rgf-001-033... 267 6e-70 BC158856_1(BC158856|pid:none) Rattus norvegicus RAB5C, member RA... 267 6e-70 AK002631_1(AK002631|pid:none) Mus musculus adult male kidney cDN... 266 1e-69 AK150346_1(AK150346|pid:none) Mus musculus bone marrow macrophag... 266 1e-69 BC080959_1(BC080959|pid:none) Xenopus tropicalis RAB5A, member R... 265 2e-69 (Q98932) RecName: Full=Ras-related protein Rab-5C; AltName: Full... 264 5e-69 BT075523_1(BT075523|pid:none) Osmerus mordax clone omor-rgc-502-... 264 5e-69 BC043866_1(BC043866|pid:none) Xenopus laevis RAB5A, member RAS o... 263 7e-69 BC091014_1(BC091014|pid:none) Xenopus tropicalis muscle RAS onco... 263 7e-69 DQ215564_1(DQ215564|pid:none) Taeniopygia guttata clone 0061P000... 263 9e-69 BC165915_1(BC165915|pid:none) Danio rerio RAB5A, member RAS onco... 263 1e-68 BC047803_1(BC047803|pid:none) Danio rerio RAB5A, member RAS onco... 263 1e-68 BC056058_1(BC056058|pid:none) Xenopus laevis Rab-protein 5, mRNA... 262 2e-68 BC094134_1(BC094134|pid:none) Xenopus laevis cDNA clone MGC:1150... 261 3e-68 BC045466_1(BC045466|pid:none) Danio rerio RAB5C, member RAS onco... 261 3e-68 BC054969_1(BC054969|pid:none) Xenopus laevis hypothetical protei... 261 3e-68 BT078133_1(BT078133|pid:none) Lepeophtheirus salmonis Pacific fo... 261 3e-68 AB035353_1(AB035353|pid:none) Drosophila melanogaster mRNA for D... 260 8e-68 AY893731_1(AY893731|pid:none) Synthetic construct Homo sapiens c... 257 5e-67 (P61020) RecName: Full=Ras-related protein Rab-5B; &(P61021) Re... 257 5e-67 AB232594_1(AB232594|pid:none) Mus musculus mRNA for Rab5B, compl... 257 5e-67 BC040143_1(BC040143|pid:none) Homo sapiens RAB5B, member RAS onc... 257 5e-67 T21442(T21442) hypothetical protein F26H9.6 - Caenorhabditis ele... 257 6e-67 AB172358_1(AB172358|pid:none) Macaca fascicularis brain cDNA clo... 257 6e-67 AK089199_1(AK089199|pid:none) Mus musculus NOD-derived CD11c +ve... 257 6e-67 CR536482_1(CR536482|pid:none) Homo sapiens full open reading fra... 256 1e-66 AL772198_6(AL772198|pid:none) Zebrafish DNA sequence from clone ... 255 2e-66 AJ296336_1(AJ296336|pid:none) Cichorium intybus X Cichorium endi... 240 8e-62 EF144757_1(EF144757|pid:none) Populus trichocarpa clone WS01117_... 239 1e-61 AJ296335_1(AJ296335|pid:none) Cichorium intybus X Cichorium endi... 238 2e-61 S49225(S49225) guanine nucleotide regulatory protein - fava bean... 238 4e-61 CP001325_386(CP001325|pid:none) Micromonas sp. RCC299 chromosome... 237 5e-61 AJ296334_1(AJ296334|pid:none) Cichorium intybus X Cichorium endi... 237 7e-61 AB470337_1(AB470337|pid:none) Periplaneta americana pamRab5 mRNA... 237 7e-61 AM438790_1(AM438790|pid:none) Vitis vinifera contig VV78X074483.... 236 2e-60 BT070338_1(BT070338|pid:none) Picea sitchensis clone WS02721_B05... 236 2e-60 GN080131_1(GN080131|pid:none) Sequence 734 from Patent WO2009027... 235 2e-60 (P31583) RecName: Full=Ras-related protein RHN1; &S20445(S20445... 234 4e-60 BX511265_14(BX511265|pid:none) Zebrafish DNA sequence from clone... 234 6e-60 CS559922_1(CS559922|pid:none) Sequence 509 from Patent WO2006032... 233 8e-60 BT084019_1(BT084019|pid:none) Zea mays full-length cDNA clone ZM... 233 8e-60 AJ292320_1(AJ292320|pid:none) Oryza sativa mRNA for RAB5A protei... 233 1e-59 AC135792_12(AC135792|pid:none) Oryza sativa chromosome 3 BAC OSJ... 232 2e-59 GN080099_1(GN080099|pid:none) Sequence 702 from Patent WO2009027... 232 2e-59 GN080009_1(GN080009|pid:none) Sequence 612 from Patent WO2009027... 232 2e-59 AY029301_1(AY029301|pid:none) Oryza sativa small GTP-binding pro... 231 3e-59 BT033632_1(BT033632|pid:none) Zea mays full-length cDNA clone ZM... 231 3e-59 CR954208_252(CR954208|pid:none) Ostreococcus tauri strain OTTH05... 231 4e-59 CP000588_238(CP000588|pid:none) Ostreococcus lucimarinus CCE9901... 231 5e-59 AC155101_11(AC155101|pid:none) Medicago truncatula clone mth2-13... 231 5e-59 AJ437656_1(AJ437656|pid:none) Simmondsia chinensis mRNA for Rab-... 230 6e-59 AB038491_1(AB038491|pid:none) Arabidopsis thaliana mRNA for Ara7... 230 6e-59 (P31582) RecName: Full=Ras-related protein RHA1; &AB019224_14(A... 229 2e-58 GN080031_1(GN080031|pid:none) Sequence 634 from Patent WO2009027... 228 2e-58 GN105997_1(GN105997|pid:none) Sequence 10778 from Patent WO20090... 227 5e-58 CS559776_1(CS559776|pid:none) Sequence 363 from Patent WO2006032... 226 1e-57 AF112964_1(AF112964|pid:none) Triticum aestivum small GTP-bindin... 224 5e-57 EF672053_1(EF672053|pid:none) Lentinula edodes GTP-binding prote... 222 2e-56 BX842682_19(BX842682|pid:none) Neurospora crassa DNA linkage gro... 220 7e-56 CU633438_179(CU633438|pid:none) Podospora anserina genomic DNA c... 220 9e-56 AM270071_68(AM270071|pid:none) Aspergillus niger contig An04c010... 219 1e-55 FN357390_39(FN357390|pid:none) Schistosoma mansoni genome sequen... 214 6e-54 AK242104_1(AK242104|pid:none) Oryza sativa Japonica Group cDNA, ... 213 1e-53 AF296447_1(AF296447|pid:none) Toxoplasma gondii Rab5 (rab5) mRNA... 212 2e-53 FN357390_40(FN357390|pid:none) Schistosoma mansoni genome sequen... 211 3e-53 AY814575_1(AY814575|pid:none) Schistosoma japonicum SJCHGC09085 ... 211 5e-53 CR382132_1125(CR382132|pid:none) Yarrowia lipolytica strain CLIB... 209 1e-52 AK083034_1(AK083034|pid:none) Mus musculus 12 days embryo spinal... 209 2e-52 AL772198_7(AL772198|pid:none) Zebrafish DNA sequence from clone ... 208 3e-52 GN106083_1(GN106083|pid:none) Sequence 10864 from Patent WO20090... 207 4e-52 GN106041_1(GN106041|pid:none) Sequence 10822 from Patent WO20090... 207 4e-52 Z73939_1(Z73939|pid:none) L.japonicus mRNA for small GTP-binding... 206 1e-51 EF148276_1(EF148276|pid:none) Populus trichocarpa x Populus delt... 206 1e-51 GN106115_1(GN106115|pid:none) Sequence 10896 from Patent WO20090... 206 1e-51 CR940347_597(CR940347|pid:none) Theileria annulata strain Ankara... 205 2e-51 AF323991_1(AF323991|pid:none) Oryza sativa small GTP-binding pro... 204 5e-51 A47733(A47733)GTP-binding protein ypt5 - fission yeast (Schizos... 204 5e-51 AB032761_1(AB032761|pid:none) Oryza sativa Japonica Group rab5B ... 204 5e-51 AB007766_1(AB007766|pid:none) Arabidopsis thaliana mRNA for Ara6... 204 6e-51 GN106179_1(GN106179|pid:none) Sequence 10960 from Patent WO20090... 203 8e-51 AL031745_58(AL031745|pid:none) Plasmodium falciparum DNA from MA... 203 8e-51 BT064369_1(BT064369|pid:none) Zea mays full-length cDNA clone ZM... 203 8e-51 AJ420321_1(AJ420321|pid:none) Plasmodium falciparum mRNA for Rab... 203 8e-51 FN392319_931(FN392319|pid:none) Pichia pastoris GS115 chromosome... 203 8e-51 DQ335217_1(DQ335217|pid:none) Nicotiana tabacum small GTPase Rab... 203 1e-50 AM920428_768(AM920428|pid:none) Penicillium chrysogenum Wisconsi... 202 1e-50 AJ006225_1(AJ006225|pid:none) Mesembryanthemum crystallinum mRNA... 202 2e-50 AB379973_1(AB379973|pid:none) Physcomitrella patens subsp. paten... 202 2e-50 GN106017_1(GN106017|pid:none) Sequence 10798 from Patent WO20090... 201 3e-50 AB379972_1(AB379972|pid:none) Physcomitrella patens subsp. paten... 201 4e-50 AB379971_1(AB379971|pid:none) Physcomitrella patens subsp. paten... 199 2e-49 CU928175_646(CU928175|pid:none) Zygosaccharomyces rouxii strain ... 198 3e-49 AL049655_18(AL049655|pid:none) Arabidopsis thaliana DNA chromoso... 198 3e-49 AK316975_1(AK316975|pid:none) Arabidopsis thaliana AT3G54840 mRN... 198 3e-49 CU928171_340(CU928171|pid:none) Kluyveromyces thermotolerans str... 198 4e-49 CR380956_367(CR380956|pid:none) Candida glabrata strain CBS138 c... 196 1e-48 AE016816_122(AE016816|pid:none) Ashbya gossypii (= Eremothecium ... 196 1e-48 CR382123_593(CR382123|pid:none) Kluyveromyces lactis strain NRRL... 194 7e-48 AE017353_114(AE017353|pid:none) Cryptococcus neoformans var. neo... 192 3e-47 CR382133_458(CR382133|pid:none) Debaryomyces hansenii strain CBS... 190 7e-47 CR382130_285(CR382130|pid:none) Yarrowia lipolytica strain CLIB1... 190 1e-46 CU928180_414(CU928180|pid:none) Kluyveromyces thermotolerans str... 188 3e-46 FM992695_712(FM992695|pid:none) Candida dubliniensis CD36 chromo... 187 6e-46 AK296517_1(AK296517|pid:none) Homo sapiens cDNA FLJ60627 complet... 185 3e-45 AB054582_1(AB054582|pid:none) Entamoeba histolytica EhRab5 gene ... 182 2e-44 BT065783_1(BT065783|pid:none) Zea mays full-length cDNA clone ZM... 181 6e-44 CR382134_47(CR382134|pid:none) Debaryomyces hansenii strain CBS7... 181 6e-44 AM270014_11(AM270014|pid:none) Aspergillus niger contig An02c019... 181 6e-44 CR382124_95(CR382124|pid:none) Kluyveromyces lactis strain NRRL ... 176 2e-42 (P36018) RecName: Full=GTP-binding protein YPT52; &S38083(S3808... 175 2e-42 (Q6GQP4) RecName: Full=Ras-related protein Rab-31; AltName: Full... 172 2e-41 BC072698_1(BC072698|pid:none) Rattus norvegicus RAB31, member RA... 172 2e-41 AF254800_1(AF254800|pid:none) Rattus norvegicus GTP-binding prot... 172 3e-41 (Q921E2) RecName: Full=Ras-related protein Rab-31; &BC013063_1(... 171 4e-41 AB232617_1(AB232617|pid:none) Mus musculus mRNA for Rab22B, comp... 171 4e-41 BT058970_1(BT058970|pid:none) Salmo salar clone ssal-rgf-517-017... 171 5e-41 BC135941_1(BC135941|pid:none) Xenopus tropicalis RAB31, member R... 171 5e-41 BC123831_1(BC123831|pid:none) Bos taurus RAB31, member RAS oncog... 171 5e-41 AY890866_1(AY890866|pid:none) Synthetic construct Homo sapiens c... 171 6e-41 AY892852_1(AY892852|pid:none) Synthetic construct Homo sapiens c... 171 6e-41 AY891988_1(AY891988|pid:none) Synthetic construct Homo sapiens c... 171 6e-41 JC4961(JC4961) rab protein 22B - human &U57091_1(U57091|pid:none) 171 6e-41 (Q13636) RecName: Full=Ras-related protein Rab-31; AltName: Full... 171 6e-41 (Q9UL26) RecName: Full=Ras-related protein Rab-22A; Sho... 170 8e-41 AY891616_1(AY891616|pid:none) Synthetic construct Homo sapiens c... 170 8e-41 AJ276210_1(AJ276210|pid:none) Homo sapiens mRNA for GTP-binding ... 170 8e-41 BC100186_1(BC100186|pid:none) Xenopus laevis RAB31, member RAS o... 170 1e-40 Z22820_1(Z22820|pid:none) Canis familiaris mRNA for Rab22 protein. 169 2e-40 CR942451_1(CR942451|pid:none) Xenopus tropicalis finished cDNA, ... 167 5e-40 BT079806_1(BT079806|pid:none) Esox lucius clone eluc-evq-536-105... 167 5e-40 (P35285) RecName: Full=Ras-related protein Rab-22A; Sho... 167 7e-40 (P51154) RecName: Full=Ras-related protein Rab-22A; Sho... 166 1e-39 BC142190_1(BC142190|pid:none) Bos taurus RAB22A, member RAS onco... 166 1e-39 BC158650_1(BC158650|pid:none) Rattus norvegicus RAB22A, member R... 166 1e-39 CP001328_573(CP001328|pid:none) Micromonas sp. RCC299 chromosome... 164 7e-39 AY730667_1(AY730667|pid:none) Trypanosoma cruzi Rab GTPase prote... 162 2e-38 BC077537_1(BC077537|pid:none) Xenopus laevis hypothetical protei... 162 3e-38 AF458973_1(AF458973|pid:none) Saccharomyces cerevisiae strain YJ... 162 3e-38 (P36019) RecName: Full=GTP-binding protein YPT53; &AF458969_1(A... 161 4e-38 AK014407_1(AK014407|pid:none) Mus musculus 12 days embryo embryo... 160 8e-38 AM502231_21(AM502231|pid:none) Leishmania infantum chromosome 13. 160 8e-38 DQ213058_1(DQ213058|pid:none) Aspergillus niger strain N402 secr... 159 1e-37 AP007161_229(AP007161|pid:none) Aspergillus oryzae RIB40 genomic... 159 1e-37 CU633897_313(CU633897|pid:none) Podospora anserina genomic DNA c... 159 1e-37 (Q559X6) RecName: Full=Ras-related protein Rab-2B; &AC116921_8(... 159 2e-37 AC104706_1(AC104706|pid:none) Oryza sativa (japonica cultivar-gr... 159 2e-37 AY357217_1(AY357217|pid:none) Leishmania donovani Rab5b (Rab5b) ... 159 2e-37 CT005252_22(CT005252|pid:none) Leishmania major strain Friedlin,... 158 3e-37 BC121383_1(BC121383|pid:none) Xenopus tropicalis hypothetical pr... 157 7e-37 DQ019033_1(DQ019033|pid:none) Trichomonas vaginalis strain G3 sm... 157 7e-37 FN357554_31(FN357554|pid:none) Schistosoma mansoni genome sequen... 156 1e-36 BT075660_1(BT075660|pid:none) Osmerus mordax clone omor-eva-509-... 156 1e-36 (P34213) RecName: Full=Ras-related protein Rab-6.1; &S31127(S31... 156 2e-36 BT082803_1(BT082803|pid:none) Anoplopoma fimbria clone afim-evh-... 156 2e-36 BC080215_1(BC080215|pid:none) Danio rerio RAB6B, member RAS onco... 155 3e-36 BC086715_1(BC086715|pid:none) Danio rerio RAB25, member RAS onco... 154 4e-36 BC170902_1(BC170902|pid:none) Xenopus tropicalis RAB21, member R... 154 4e-36 AK154012_1(AK154012|pid:none) Mus musculus 2 days neonate thymus... 154 4e-36 AF119836_1(AF119836|pid:none) Homo sapiens GTP-binding protein R... 154 4e-36 BX890617_2(BX890617|pid:none) Zebrafish DNA sequence from clone ... 154 4e-36 AF101310_4(AF101310|pid:none) Caenorhabditis elegans cosmid C39F... 154 6e-36 GM977163_1(GM977163|pid:none) Sequence 71 from Patent WO20081456... 154 6e-36 (Q22782) RecName: Full=Ras-related protein Rab-6.2; &T34375(T34... 154 8e-36 BT071594_1(BT071594|pid:none) Picea sitchensis clone WS02926_J12... 154 8e-36 CR933465_1(CR933465|pid:none) Paramecium tetraurelia, Small GTPa... 154 8e-36 AE014134_2251(AE014134|pid:none) Drosophila melanogaster chromos... 154 8e-36 BT074643_1(BT074643|pid:none) Osmerus mordax clone omor-eva-513-... 153 1e-35 CR457282_1(CR457282|pid:none) Homo sapiens full open reading fra... 153 1e-35 (P55745) RecName: Full=Ras-related protein Rab-21; 153 1e-35 AF461434_1(AF461434|pid:none) Babesia gibsoni small GTP binding ... 153 1e-35 DQ397201_1(DQ397201|pid:none) Saccharum officinarum small GTP bi... 153 1e-35 BC157379_1(BC157379|pid:none) Danio rerio RAB6A, member RAS onco... 153 1e-35 (P20340) RecName: Full=Ras-related protein Rab-6A; Shor... 153 1e-35 AF013572_1(AF013572|pid:none) Bombyx mori small GTP-binding prot... 153 1e-35 AF093826_1(AF093826|pid:none) Plasmodium berghei GTP binding pro... 153 1e-35 (Q17R06) RecName: Full=Ras-related protein Rab-21; &BC118088_1(... 153 1e-35 BC091529_1(BC091529|pid:none) Danio rerio zgc:112018, mRNA (cDNA... 153 1e-35 AK172891_1(AK172891|pid:none) Mus musculus mRNA for mKIAA0118 pr... 153 1e-35 AY814955_1(AY814955|pid:none) Schistosoma japonicum SJCHGC02776 ... 153 1e-35 DQ311397_1(DQ311397|pid:none) Bombyx mori ras small monomeric GT... 153 1e-35 EU956012_1(EU956012|pid:none) Zea mays clone 1555506 ras-related... 153 1e-35 (P35282) RecName: Full=Ras-related protein Rab-21; AltName: Full... 153 1e-35 FJ943982_1(FJ943982|pid:none) Ovis aries RAB21 mRNA, complete cds. 153 1e-35 FN316995_1(FN316995|pid:none) Schistosoma japonicum isolate Anhu... 153 1e-35 BT044916_1(BT044916|pid:none) Salmo salar clone ssal-rgf-507-079... 153 1e-35 AM502236_114(AM502236|pid:none) Leishmania infantum chromosome 18. 152 2e-35 CR932579_1(CR932579|pid:none) Paramecium tetraurelia, Small GTPa... 152 2e-35 BT048705_1(BT048705|pid:none) Salmo salar clone ssal-sjb-012-287... 152 2e-35 BC097051_1(BC097051|pid:none) Danio rerio zgc:63637, mRNA (cDNA ... 152 2e-35 CR541984_1(CR541984|pid:none) Homo sapiens full open reading fra... 152 2e-35 CP000582_359(CP000582|pid:none) Ostreococcus lucimarinus CCE9901... 152 2e-35 FN357335_32(FN357335|pid:none) Schistosoma mansoni genome sequen... 152 2e-35 AF007547_1(AF007547|pid:none) Trypanosoma brucei Trab5B mRNA, co... 152 2e-35 EF144593_1(EF144593|pid:none) Populus trichocarpa clone WS01111_... 152 2e-35 GN105857_1(GN105857|pid:none) Sequence 10638 from Patent WO20090... 152 2e-35 GN106155_1(GN106155|pid:none) Sequence 10936 from Patent WO20090... 152 2e-35 AC069472_3(AC069472|pid:none) Arabidopsis thaliana chromosome 3 ... 152 2e-35 BC118789_1(BC118789|pid:none) Xenopus tropicalis RAB6B, member R... 152 2e-35 CR940347_17(CR940347|pid:none) Theileria annulata strain Ankara ... 152 2e-35 EU810302_1(EU810302|pid:none) Gymnochlora stellata Ras-related s... 152 2e-35 BT076853_1(BT076853|pid:none) Caligus rogercresseyi clone crog-e... 152 2e-35 EF145933_1(EF145933|pid:none) Populus trichocarpa clone WS0114_G... 152 2e-35 GN106117_1(GN106117|pid:none) Sequence 10898 from Patent WO20090... 152 2e-35 BC108532_1(BC108532|pid:none) Xenopus laevis hypothetical protei... 152 2e-35 AB054584_1(AB054584|pid:none) Entamoeba histolytica EhRabF1 mRNA... 152 3e-35 AM920437_2206(AM920437|pid:none) Penicillium chrysogenum Wiscons... 152 3e-35 (Q15771) RecName: Full=Ras-related protein Rab-30; &(Q17QB7) Re... 152 3e-35 BC076437_1(BC076437|pid:none) Danio rerio RAB30, member RAS onco... 151 4e-35 EU365390_1(EU365390|pid:none) Euplotes octocarinatus Rab GTPase ... 151 4e-35 AC161399_25(AC161399|pid:none) Medicago truncatula chromosome 2 ... 151 4e-35 AF228419_1(AF228419|pid:none) Toxoplasma gondii RAB6 protein (Ra... 151 4e-35 BC167022_1(BC167022|pid:none) Rattus norvegicus RAB17, member RA... 151 4e-35 DQ825390_1(DQ825390|pid:none) Theileria parva strain Muguga smal... 151 4e-35 (Q40191) RecName: Full=Ras-related protein Rab11A; &Z73949_1(Z7... 151 4e-35 AC140549_17(AC140549|pid:none) Medicago truncatula clone mth2-28... 151 5e-35 BC154221_1(BC154221|pid:none) Danio rerio zgc:63637, mRNA (cDNA ... 151 5e-35 E42148(E42148)GTP-binding protein rab14 - rat 151 5e-35 BT034664_1(BT034664|pid:none) Zea mays full-length cDNA clone ZM... 150 6e-35 EU954271_1(EU954271|pid:none) Zea mays clone 1460642 ras-related... 150 6e-35 X92977_1(X92977|pid:none) P.falciparum mRNA for rab6 GTPase prot... 150 6e-35 AB024025_4(AB024025|pid:none) Arabidopsis thaliana genomic DNA, ... 150 6e-35 DQ000572_1(DQ000572|pid:none) Synthetic construct clone PSF:1098... 150 6e-35 AB463205_1(AB463205|pid:none) Synthetic construct DNA, clone: pF... 150 6e-35 AM269968_23(AM269968|pid:none) Aspergillus niger contig An01c021... 150 6e-35 EF678326_1(EF678326|pid:none) Picea sitchensis clone WS02914_M23... 150 6e-35 CR380949_94(CR380949|pid:none) Candida glabrata strain CBS138 ch... 150 6e-35 D12541_1(D12541|pid:none) Pisum sativum mRNA for GTP-binding pro... 150 6e-35 BT057635_1(BT057635|pid:none) Salmo salar clone ssal-eve-504-180... 150 6e-35 FN357297_79(FN357297|pid:none) Schistosoma mansoni genome sequen... 150 8e-35 AC104285_6(AC104285|pid:none) Oryza sativa (japonica cultivar-gr... 150 8e-35 AB076904_1(AB076904|pid:none) Ciona intestinalis Ci-rab2 mRNA fo... 150 8e-35 AM438608_1(AM438608|pid:none) Vitis vinifera contig VV78X052328.... 150 8e-35 Z73950_1(Z73950|pid:none) L.japonicus mRNA for small GTP-binding... 150 8e-35 BT077352_1(BT077352|pid:none) Lepeophtheirus salmonis Pacific fo... 150 8e-35 AY904354_1(AY904354|pid:none) Gracilariopsis lemaneiformis small... 150 8e-35 FN316970_1(FN316970|pid:none) Schistosoma japonicum isolate Anhu... 150 8e-35 CS559708_1(CS559708|pid:none) Sequence 295 from Patent WO2006032... 150 1e-34 BT019697_1(BT019697|pid:none) Synthetic construct Homo sapiens R... 150 1e-34 AC008031_29(AC008031|pid:none) Trypanosoma brucei chromosome 2 c... 150 1e-34 (P36409) RecName: Full=Ras-related protein Rab-2A; 150 1e-34 BT051367_1(BT051367|pid:none) Medicago truncatula clone MTYF1_F2... 150 1e-34 D12548_1(D12548|pid:none) Pisum sativum mRNA for GTP-binding pro... 150 1e-34 BT039522_1(BT039522|pid:none) Zea mays full-length cDNA clone ZM... 150 1e-34 CS560194_1(CS560194|pid:none) Sequence 781 from Patent WO2006032... 150 1e-34 GN106077_1(GN106077|pid:none) Sequence 10858 from Patent WO20090... 150 1e-34 Y08425_1(Y08425|pid:none) N.plumbaginifolia mRNA for small GTP-b... 150 1e-34 (Q05975) RecName: Full=Ras-related protein Rab-2; &S38341(S3834... 150 1e-34 GN106197_1(GN106197|pid:none) Sequence 10978 from Patent WO20090... 150 1e-34 AP008208_2028(AP008208|pid:none) Oryza sativa (japonica cultivar... 150 1e-34 (P25766) RecName: Full=Ras-related protein RGP1; AltName: Full=G... 149 1e-34 E71440(E71440)GTP-binding protein RAB2A - Arabidopsis thaliana 149 1e-34 AJ307662_21(AJ307662|pid:none) Oryza sativa genomic DNA fragment... 149 1e-34 AK059888_1(AK059888|pid:none) Oryza sativa Japonica Group cDNA c... 149 1e-34 CR933429_1(CR933429|pid:none) Paramecium tetraurelia, Small GTPa... 149 1e-34 BC058059_1(BC058059|pid:none) Danio rerio zgc:63637, mRNA (cDNA ... 149 1e-34 BC152630_1(BC152630|pid:none) Danio rerio zgc:92772, mRNA (cDNA ... 149 1e-34 EF103367_1(EF103367|pid:none) Haliotis discus discus Ras-related... 149 1e-34 Z73937_1(Z73937|pid:none) L.japonicus mRNA for small GTP-binding... 149 1e-34 (Q05974) RecName: Full=Ras-related protein Rab-1A; &S38339(S383... 149 1e-34 D12542_1(D12542|pid:none) Pisum sativum mRNA for GTP-binding pro... 149 1e-34 FN357538_13(FN357538|pid:none) Schistosoma mansoni genome sequen... 149 1e-34 BC076247_1(BC076247|pid:none) Danio rerio zgc:92772, mRNA (cDNA ... 149 1e-34 BT070553_1(BT070553|pid:none) Picea sitchensis clone WS02735_N04... 149 1e-34 AL161545_37(AL161545|pid:none) Arabidopsis thaliana DNA chromoso... 149 1e-34 BT078735_1(BT078735|pid:none) Lepeophtheirus salmonis Pacific fo... 149 2e-34 AY893729_1(AY893729|pid:none) Synthetic construct Homo sapiens c... 149 2e-34 AC124143_12(AC124143|pid:none) Oryza sativa (japonica cultivar-g... 149 2e-34 BC009227_1(BC009227|pid:none) Homo sapiens RAB13, member RAS onc... 149 2e-34 AL670003_2(AL670003|pid:none) Neurospora crassa DNA linkage grou... 149 2e-34 AM459225_1(AM459225|pid:none) Vitis vinifera contig VV78X087264.... 149 2e-34 DQ414564_1(DQ414564|pid:none) Suberites domuncula Rab11 gene, co... 149 2e-34 BC094846_1(BC094846|pid:none) Homo sapiens RAB13, member RAS onc... 149 2e-34 CU928171_64(CU928171|pid:none) Kluyveromyces thermotolerans stra... 149 2e-34 CR382134_161(CR382134|pid:none) Debaryomyces hansenii strain CBS... 149 2e-34 (P46629) RecName: Full=Ras-related protein Rab-25; &A48500(A485... 149 2e-34 AB482179_1(AB482179|pid:none) Babesia bigemina Rab11 mRNA for sm... 149 2e-34 AK102491_1(AK102491|pid:none) Oryza sativa Japonica Group cDNA c... 149 2e-34 (P51153) RecName: Full=Ras-related protein Rab-13; AltName: Full... 149 2e-34 (Q58DS5) RecName: Full=Ras-related protein Rab-13; &BT021522_1(... 149 2e-34 EU244432_1(EU244432|pid:none) Capra hircus RAB11B (rab11b) mRNA,... 149 2e-34 S71559(S71559) GTP-binding protein rab2 - soybean &U32185_1(U32... 149 2e-34 (Q39570) RecName: Full=GTP-binding protein YPTC4; &JC4106(JC410... 149 2e-34 EF639001_1(EF639001|pid:none) Triatoma infestans clone TI-420 Ra... 149 2e-34 GN105993_1(GN105993|pid:none) Sequence 10774 from Patent WO20090... 149 2e-34 AY894025_1(AY894025|pid:none) Synthetic construct Homo sapiens c... 149 2e-34 BC045374_1(BC045374|pid:none) Danio rerio RAB14, member RAS onco... 149 2e-34 AE017352_188(AE017352|pid:none) Cryptococcus neoformans var. neo... 149 2e-34 BT035355_1(BT035355|pid:none) Zea mays full-length cDNA clone ZM... 149 2e-34 EF560724_1(EF560724|pid:none) Homo sapiens clone DKFZp564C1023 R... 149 2e-34 (P46638) RecName: Full=Ras-related protein Rab-11B; &A55005(A55... 149 2e-34 AK340277_1(AK340277|pid:none) Acyrthosiphon pisum ACYPI001698 mR... 149 2e-34 AK297498_1(AK297498|pid:none) Homo sapiens cDNA FLJ61134 complet... 149 2e-34 CR541691_1(CR541691|pid:none) Homo sapiens full open reading fra... 149 2e-34 CR954202_213(CR954202|pid:none) Ostreococcus tauri strain OTTH05... 149 2e-34 AK104346_1(AK104346|pid:none) Oryza sativa Japonica Group cDNA c... 149 2e-34 DQ311306_1(DQ311306|pid:none) Bombyx mori ras-related GTP-bindin... 149 2e-34 (P38555) RecName: Full=GTP-binding protein YPT31/YPT8; AltName: ... 149 2e-34 (P35292) RecName: Full=Ras-related protein Rab-17; &A46434(A464... 149 2e-34 BT049157_1(BT049157|pid:none) Salmo salar clone ssal-rgb2-591-24... 149 2e-34 (O35509) RecName: Full=Ras-related protein Rab-11B; &(Q15907) R... 149 2e-34 EF084887_1(EF084887|pid:none) Picea sitchensis clone WS0292_K24 ... 148 3e-34 AJ851582_1(AJ851582|pid:none) Gallus gallus mRNA for hypothetica... 148 3e-34 FN392319_1319(FN392319|pid:none) Pichia pastoris GS115 chromosom... 148 3e-34 (Q39572) RecName: Full=Ras-related protein YPTC6; &JC4108(JC410... 148 3e-34 BC082421_1(BC082421|pid:none) Xenopus laevis hypothetical LOC494... 148 3e-34 (P61019) RecName: Full=Ras-related protein Rab-2A; &(P61105) Re... 148 3e-34 GM977155_1(GM977155|pid:none) Sequence 63 from Patent WO20081456... 148 3e-34 CP000586_209(CP000586|pid:none) Ostreococcus lucimarinus CCE9901... 148 3e-34 AL137068_10(AL137068|pid:none) Human DNA sequence from clone RP1... 148 3e-34 AK009707_1(AK009707|pid:none) Mus musculus adult male tongue cDN... 148 3e-34 GN105983_1(GN105983|pid:none) Sequence 10764 from Patent WO20090... 148 3e-34 (Q90965) RecName: Full=Ras-related protein Rab-2A; &S52325(S523... 148 3e-34 GN106013_1(GN106013|pid:none) Sequence 10794 from Patent WO20090... 148 3e-34 AJ968959_1(AJ968959|pid:none) Mus musculus mRNA for RAB14 protei... 148 3e-34 BT052509_1(BT052509|pid:none) Medicago truncatula clone MTYFD_FE... 148 3e-34 GM977157_1(GM977157|pid:none) Sequence 65 from Patent WO20081456... 148 3e-34 AF003139_1(AF003139|pid:none) Caenorhabditis elegans cosmid F53G... 148 3e-34 DQ414558_1(DQ414558|pid:none) Suberites domuncula Rab2 gene, com... 148 3e-34 AC183493_34(AC183493|pid:none) Brassica oleracea Contig B, compl... 148 3e-34 FM992695_664(FM992695|pid:none) Candida dubliniensis CD36 chromo... 148 3e-34 JC2487(JC2487) GTP-binding protein H-YPT3 - human &X79780_1(X79... 148 3e-34 AL161545_36(AL161545|pid:none) Arabidopsis thaliana DNA chromoso... 148 3e-34 (P22129) RecName: Full=Ras-related protein Rab-11B; AltName: Ful... 148 3e-34 BT043649_1(BT043649|pid:none) Salmo salar clone HM5_0924 RAB2A, ... 148 3e-34 D12547_1(D12547|pid:none) Pisum sativum mRNA for GTP-binding pro... 148 3e-34 AF127669_1(AF127669|pid:none) Mus musculus small GTPase (Rab11a)... 148 3e-34 B86153(B86153) ARA-5 [imported] - Arabidopsis thaliana &U89959_... 148 3e-34 (P53994) RecName: Full=Ras-related protein Rab-2A; &AB232585_1(... 148 3e-34 BT045578_1(BT045578|pid:none) Salmo salar clone ssal-rgf-525-209... 148 3e-34 (P61107) RecName: Full=Ras-related protein Rab-14; &(Q52NJ6) Re... 148 3e-34 (Q01890) RecName: Full=Ras-like GTP-binding protein YPT1; &JC53... 148 4e-34 AF274025_1(AF274025|pid:none) Homo sapiens GTP-binding protein R... 148 4e-34 BC087498_1(BC087498|pid:none) Xenopus laevis hypothetical LOC496... 148 4e-34 BT070586_1(BT070586|pid:none) Picea sitchensis clone WS02737_M21... 148 4e-34 BT044417_1(BT044417|pid:none) Drosophila melanogaster FI09101 fu... 148 4e-34 FN357536_6(FN357536|pid:none) Schistosoma mansoni genome sequenc... 148 4e-34 BC120091_1(BC120091|pid:none) Bos taurus RAB25, member RAS oncog... 148 4e-34 (Q9FK68) RecName: Full=Ras-related protein RABA1c; &AB012245_16... 148 4e-34 BC071068_1(BC071068|pid:none) Xenopus laevis MGC78967 protein, m... 148 4e-34 (Q58DW6) RecName: Full=Ras-related protein Rab-25; &BT021481_1(... 148 4e-34 BC075268_1(BC075268|pid:none) Xenopus tropicalis RAB11B, member ... 148 4e-34 AY690483_1(AY690483|pid:none) Triticum aestivum rab GTP-binding ... 148 4e-34 AC183493_10(AC183493|pid:none) Brassica oleracea Contig B, compl... 148 4e-34 AE016820_626(AE016820|pid:none) Ashbya gossypii (= Eremothecium ... 148 4e-34 AC183495_20(AC183495|pid:none) Brassica oleracea Contig A, compl... 147 5e-34 AY223338_1(AY223338|pid:none) Schistosoma japonicum clone ZZD836... 147 5e-34 AY088624_1(AY088624|pid:none) Arabidopsis thaliana clone 8545 mR... 147 5e-34 AY220456_1(AY220456|pid:none) Limulus polyphemus rab11-2 mRNA, c... 147 5e-34 BT076415_1(BT076415|pid:none) Caligus rogercresseyi clone crog-e... 147 5e-34 (Q55FK2) RecName: Full=Ras-related protein Rab-6; 147 5e-34 BT035582_1(BT035582|pid:none) Zea mays full-length cDNA clone ZM... 147 5e-34 AL035708_16(AL035708|pid:none) Arabidopsis thaliana DNA chromoso... 147 5e-34 AK071461_1(AK071461|pid:none) Oryza sativa Japonica Group cDNA c... 147 5e-34 CP001323_241(CP001323|pid:none) Micromonas sp. RCC299 chromosome... 147 5e-34 (Q39222) RecName: Full=Ras-related protein RABA1b; AltName: Full... 147 5e-34 AC183496_25(AC183496|pid:none) Brassica oleracea, *** SEQUENCING... 147 5e-34 AP008215_340(AP008215|pid:none) Oryza sativa (japonica cultivar-... 147 5e-34 CR932818_1(CR932818|pid:none) Paramecium tetraurelia, Small GTPa... 147 5e-34 GN080103_1(GN080103|pid:none) Sequence 706 from Patent WO2009027... 147 5e-34 CU928175_289(CU928175|pid:none) Zygosaccharomyces rouxii strain ... 147 5e-34 CR536494_1(CR536494|pid:none) Homo sapiens full open reading fra... 147 5e-34 U46926_1(U46926|pid:none) Arabidopsis thaliana GTP-binding prote... 147 5e-34 DQ414565_1(DQ414565|pid:none) Suberites domuncula Rab14 gene, pa... 147 7e-34 CR932606_1(CR932606|pid:none) Paramecium tetraurelia, Small GTPa... 147 7e-34 CR932697_1(CR932697|pid:none) Paramecium tetraurelia, Small GTPa... 147 7e-34 Z73931_1(Z73931|pid:none) L.japonicus mRNA for small GTP-binding... 147 7e-34 BC048889_1(BC048889|pid:none) Danio rerio RAB11B, member RAS onc... 147 7e-34 GN080095_1(GN080095|pid:none) Sequence 698 from Patent WO2009027... 147 7e-34 BT076392_1(BT076392|pid:none) Caligus rogercresseyi clone crog-e... 147 7e-34 AB470307_1(AB470307|pid:none) Nicotiana tabacum NtRab11D mRNA fo... 147 7e-34 DQ157704_1(DQ157704|pid:none) Aiptasia pulchella Rab11 protein m... 147 7e-34 BC055141_1(BC055141|pid:none) Danio rerio zgc:63565, mRNA (cDNA ... 147 7e-34 BT059700_1(BT059700|pid:none) Salmo salar clone ssal-rgf-002-342... 147 7e-34 EF146669_1(EF146669|pid:none) Populus trichocarpa clone WS01211_... 147 7e-34 AY896243_1(AY896243|pid:none) Trichomonas vaginalis strain G3 sm... 147 7e-34 GN080135_1(GN080135|pid:none) Sequence 738 from Patent WO2009027... 147 7e-34 AY851657_1(AY851657|pid:none) Triticum aestivum small GTP-bindin... 147 7e-34 BC074609_1(BC074609|pid:none) Xenopus tropicalis RAB30, member R... 147 7e-34 BT077989_1(BT077989|pid:none) Lepeophtheirus salmonis Pacific fo... 147 7e-34 AY891305_1(AY891305|pid:none) Synthetic construct Homo sapiens c... 147 7e-34 (Q39571) RecName: Full=GTP-binding protein YPTC1; &DQ222936_1(D... 147 9e-34 GN106103_1(GN106103|pid:none) Sequence 10884 from Patent WO20090... 147 9e-34 GN105939_1(GN105939|pid:none) Sequence 10720 from Patent WO20090... 147 9e-34 AF083124_1(AF083124|pid:none) Homo sapiens CATX-8 mRNA, complete... 147 9e-34 J02998_1(J02998|pid:none) Rat ras-related protein mRNA, clone NT... 147 9e-34 GN106085_1(GN106085|pid:none) Sequence 10866 from Patent WO20090... 147 9e-34 (P22125) RecName: Full=Ras-related protein ORAB-1; &M38393_1(M3... 147 9e-34 (Q9WTL2) RecName: Full=Ras-related protein Rab-25; &AB232620_1(... 147 9e-34 BT036850_1(BT036850|pid:none) Zea mays full-length cDNA clone ZM... 147 9e-34 AB035354_1(AB035354|pid:none) Drosophila melanogaster mRNA for D... 147 9e-34 BT069763_1(BT069763|pid:none) Zea mays full-length cDNA clone ZM... 147 9e-34 GN106111_1(GN106111|pid:none) Sequence 10892 from Patent WO20090... 147 9e-34 EU965206_1(EU965206|pid:none) Zea mays clone 284484 ras-related ... 147 9e-34 CU638743_340(CU638743|pid:none) Podospora anserina genomic DNA c... 147 9e-34 BC058341_1(BC058341|pid:none) Danio rerio RAB14, member RAS onco... 147 9e-34 L12031_1(L12031|pid:none) Leishmania major V121 GTP-binding prot... 147 9e-34 AM494964_85(AM494964|pid:none) Leishmania braziliensis chromosom... 147 9e-34 AB015472_10(AB015472|pid:none) Arabidopsis thaliana genomic DNA,... 147 9e-34 Z73932_1(Z73932|pid:none) L.japonicus mRNA for small GTP-binding... 147 9e-34 BC045014_1(BC045014|pid:none) Xenopus laevis RAB1, member RAS on... 147 9e-34 BT051415_1(BT051415|pid:none) Medicago truncatula clone MTYF1_F2... 147 9e-34 BC041250_1(BC041250|pid:none) Xenopus laevis RAB11B, member RAS ... 147 9e-34 BT056265_1(BT056265|pid:none) Drosophila melanogaster FI09227 fu... 147 9e-34 AL606522_3(AL606522|pid:none) Mouse DNA sequence from clone RP23... 146 1e-33 DQ414556_1(DQ414556|pid:none) Suberites domuncula Rab1 gene, com... 146 1e-33 (P49104) RecName: Full=Ras-related protein Rab-2-B; &BT068076_1... 146 1e-33 EU284879_1(EU284879|pid:none) TSA: Elaeis guineensis EgEfMPOB000... 146 1e-33 AC183494_13(AC183494|pid:none) Brassica oleracea Contig C, compl... 146 1e-33 DQ214474_1(DQ214474|pid:none) Taeniopygia guttata clone 0063P003... 146 1e-33 BC097013_1(BC097013|pid:none) Danio rerio zgc:86773, mRNA (cDNA ... 146 1e-33 BT039216_1(BT039216|pid:none) Zea mays full-length cDNA clone ZM... 146 1e-33 DQ397202_1(DQ397202|pid:none) Saccharum officinarum small GTP bi... 146 1e-33 EF147099_1(EF147099|pid:none) Populus trichocarpa clone WS01227_... 146 1e-33 (Q28IZ3) RecName: Full=Ras-related protein Rab-19; &CR760145_1(... 146 1e-33 BT049939_1(BT049939|pid:none) Salmo salar clone ssal-rgb2-549-38... 146 1e-33 BT035344_1(BT035344|pid:none) Zea mays full-length cDNA clone ZM... 146 1e-33 GM977167_1(GM977167|pid:none) Sequence 75 from Patent WO20081456... 146 1e-33 BT064711_1(BT064711|pid:none) Zea mays full-length cDNA clone ZM... 146 1e-33 (Q5KTJ6) RecName: Full=Ras-related protein Rab-13; &AB158369_1(... 146 1e-33 BC168745_1(BC168745|pid:none) Rattus norvegicus RAB25, member RA... 146 1e-33 EF144948_1(EF144948|pid:none) Populus trichocarpa clone WS0111_B... 146 1e-33 AB035352_1(AB035352|pid:none) Drosophila melanogaster mRNA for D... 146 1e-33 EF710656_1(EF710656|pid:none) Glyptapanteles indiensis clone BAC... 146 1e-33 S06147(S06147;S03189)GTP-binding protein rab1B - rat 146 1e-33 BT001785_1(BT001785|pid:none) Drosophila melanogaster RH21315 fu... 146 1e-33 (P62820) RecName: Full=Ras-related protein Rab-1A; AltName: Full... 146 1e-33 AC138015_11(AC138015|pid:none) Medicago truncatula clone mth2-34... 146 2e-33 (Q2TA29) RecName: Full=Ras-related protein Rab-11A; &BC111143_1... 146 2e-33 (P51996) RecName: Full=GTP-binding protein YPT32/YPT11; AltName:... 146 2e-33 AF468652_1(AF468652|pid:none) Homo sapiens RAB2B mRNA, complete ... 146 2e-33 AC093018_9(AC093018|pid:none) Oryza sativa chromosome 3 BAC OSJN... 146 2e-33 CR382124_213(CR382124|pid:none) Kluyveromyces lactis strain NRRL... 146 2e-33 AK111561_1(AK111561|pid:none) Oryza sativa Japonica Group cDNA c... 146 2e-33 DQ019037_1(DQ019037|pid:none) Trichomonas vaginalis strain G3 sm... 146 2e-33 AC140545_16(AC140545|pid:none) Medicago truncatula clone mth2-11... 146 2e-33 CR932630_1(CR932630|pid:none) Paramecium tetraurelia, Small GTPa... 146 2e-33 CR382122_22(CR382122|pid:none) Kluyveromyces lactis strain NRRL ... 146 2e-33 AF030183_1(AF030183|pid:none) Entamoeba histolytica GTP-binding ... 146 2e-33 L29273_1(L29273|pid:none) Nicotiana tabacum SR1 Nt-rab6 mRNA, co... 146 2e-33 AC159407_36(AC159407|pid:none) Trypanosoma brucei chromosome 8 c... 146 2e-33 AB025628_11(AB025628|pid:none) Arabidopsis thaliana genomic DNA,... 146 2e-33 AL021710_9(AL021710|pid:none) Arabidopsis thaliana DNA chromosom... 146 2e-33 (P34140) RecName: Full=Ras-related protein Rab-1B; 146 2e-33 BX647601_1(BX647601|pid:none) Homo sapiens mRNA; cDNA DKFZp313C1... 146 2e-33 (Q40194) RecName: Full=Ras-related protein Rab11D; &Z73952_1(Z7... 146 2e-33 CR380957_540(CR380957|pid:none) Candida glabrata strain CBS138 c... 146 2e-33 AF532626_1(AF532626|pid:none) Glycine max small GTP-binding prot... 146 2e-33 BT037200_1(BT037200|pid:none) Zea mays full-length cDNA clone ZM... 145 2e-33 BT068335_1(BT068335|pid:none) Zea mays full-length cDNA clone ZM... 145 2e-33 EF085830_1(EF085830|pid:none) Picea sitchensis clone WS0286_P20 ... 145 2e-33 AJ810707_1(AJ810707|pid:none) Poa pratensis mRNA for RAB1-like (... 145 2e-33 (Q2HJH2) RecName: Full=Ras-related protein Rab-1B; &BC105393_1(... 145 2e-33 D12549_1(D12549|pid:none) Pisum sativum mRNA for GTP-binding pro... 145 2e-33 AC069473_2(AC069473|pid:none) Arabidopsis thaliana chromosome 3 ... 145 2e-33 D12546_1(D12546|pid:none) Pisum sativum mRNA for GTP-binding pro... 145 2e-33 GN106065_1(GN106065|pid:none) Sequence 10846 from Patent WO20090... 145 2e-33 CR533462_1(CR533462|pid:none) Homo sapiens full open reading fra... 145 2e-33 (P49103) RecName: Full=Ras-related protein Rab-2-A; &T02242(T02... 145 2e-33 AK059799_1(AK059799|pid:none) Oryza sativa Japonica Group cDNA c... 145 2e-33 AY060495_1(AY060495|pid:none) Arabidopsis thaliana AT4g17530/dl4... 145 2e-33 EF144402_1(EF144402|pid:none) Populus trichocarpa clone PX0019_E... 145 2e-33 AY220749_1(AY220749|pid:none) Limulus polyphemus Rab11-1a mRNA, ... 145 2e-33 BC081187_1(BC081187|pid:none) Xenopus laevis MGC84419 protein, m... 145 2e-33 (Q5RE13) RecName: Full=Ras-related protein Rab-1B; &(Q9H0U4) Re... 145 2e-33 GM977161_1(GM977161|pid:none) Sequence 69 from Patent WO20081456... 145 2e-33 BT043430_1(BT043430|pid:none) Zea mays full-length cDNA clone ZM... 145 3e-33 (Q9D1G1) RecName: Full=Ras-related protein Rab-1B; &AB232584_1(... 145 3e-33 CR932686_1(CR932686|pid:none) Paramecium tetraurelia, Small GTPa... 145 3e-33 GN106059_1(GN106059|pid:none) Sequence 10840 from Patent WO20090... 145 3e-33 BT057068_1(BT057068|pid:none) Salmo salar clone ssal-eve-570-039... 145 3e-33 (Q550H6) RecName: Full=Ras-related protein Rab-11C; 145 3e-33 AY220748_1(AY220748|pid:none) Limulus polyphemus Rab11-1c mRNA, ... 145 3e-33 (Q92928) RecName: Full=Putative Ras-related protein Rab-1C; ... 145 3e-33 EF083999_1(EF083999|pid:none) Picea sitchensis clone WS0281_E05 ... 145 3e-33 (Q52NJ2) RecName: Full=Ras-related protein Rab-1A; &AY996813_1(... 145 3e-33 AM471469_2(AM471469|pid:none) Vitis vinifera contig VV78X014719.... 145 3e-33 GM977145_1(GM977145|pid:none) Sequence 53 from Patent WO20081456... 145 3e-33 AK151085_1(AK151085|pid:none) Mus musculus bone marrow macrophag... 145 3e-33 BC121850_1(BC121850|pid:none) Xenopus tropicalis cDNA clone IMAG... 145 3e-33 BT077510_1(BT077510|pid:none) Lepeophtheirus salmonis Pacific fo... 145 3e-33 BT045814_1(BT045814|pid:none) Salmo salar clone ssal-rgf-532-060... 145 3e-33 BC107443_1(BC107443|pid:none) Rattus norvegicus RAB2B, member RA... 145 4e-33 EU162609_23(EU162609|pid:none) Cleome spinosa clone contig83 BAC... 145 4e-33 BT080360_1(BT080360|pid:none) Caligus clemensi clone ccle-evs-52... 145 4e-33 AB241229_1(AB241229|pid:none) Pyrsonympha grandis RsSmRab11_1 mR... 145 4e-33 AF108883_1(AF108883|pid:none) Capsicum annuum small GTP-binding ... 145 4e-33 AF324990_1(AF324990|pid:none) Arabidopsis thaliana AT5g47200 (AT... 145 4e-33 (P10536) RecName: Full=Ras-related protein Rab-1B; &X13905_1(X1... 145 4e-33 AB463206_1(AB463206|pid:none) Synthetic construct DNA, clone: pF... 145 4e-33 AY223077_1(AY223077|pid:none) Schistosoma japonicum SJCHGC09497 ... 145 4e-33 AJ518934_1(AJ518934|pid:none) Hordeum vulgare subsp. vulgare mRN... 145 4e-33 BT058103_1(BT058103|pid:none) Drosophila melanogaster GH27649 fu... 145 4e-33
>(Q86JP3) RecName: Full=Ras-related protein Rab-5A; &AC115599_18(AC115599|pid:none) Length = 201
Score = 334 bits (857), Expect(2) = 4e-91 Identities = 170/174 (97%), Positives = 171/174 (98%) Frame = +1
Query: 217 MNNNNKIFQFKLVLLGEAAVGKSSLVLRFVRGHFLDYQESTIGAAFLAQTVCLNDTTVKF 396 MNNNNKIFQFKLVLLGEAAVGKSSLVLRFVRGHFLDYQESTIGAAFLAQTVCLNDTTVKF Sbjct: 1 MNNNNKIFQFKLVLLGEAAVGKSSLVLRFVRGHFLDYQESTIGAAFLAQTVCLNDTTVKF 60
Query: 397 EIWDTAGQERYHTLAPMYYRGAQAAIVVYDIRSEDSFERAIKWVKELQRQGSPNIVIALA 576 EIWDTAGQERYHTLAPMYYRGAQAAIVVYDIRSEDSFERAIKWVKELQRQGSPNIVIALA Sbjct: 61 EIWDTAGQERYHTLAPMYYRGAQAAIVVYDIRSEDSFERAIKWVKELQRQGSPNIVIALA 120
Query: 577 GNKLDLAAKRKVETAEAQQYAEENGLLFMETSAKTSQNVNELFVEIAKKTSQNP 738 GNKLDLAAKRKVETAEAQQYAEENGLLFMETSAKTSQNVNELFVEIAKK + P Sbjct: 121 GNKLDLAAKRKVETAEAQQYAEENGLLFMETSAKTSQNVNELFVEIAKKLPKTP 174
Score = 25.4 bits (54), Expect(2) = 4e-91 Identities = 11/11 (100%), Positives = 11/11 (100%) Frame = +2
Query: 752 GSGRVAIAPID 784 GSGRVAIAPID Sbjct: 179 GSGRVAIAPID 189
Lambda K H 0.318 0.134 0.401
Gapped Lambda K H 0.267 0.0410 0.140
Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 3236559 Number of Hits to DB: 1,202,500,069 Number of extensions: 19354149 Number of successful extensions: 56863 Number of sequences better than 10.0: 3759 Number of HSP's gapped: 54342 Number of HSP's successfully gapped: 3789 Length of query: 393 Length of database: 1,051,180,864 Length adjustment: 131 Effective length of query: 262 Effective length of database: 627,191,635 Effective search space: 164324208370 Effective search space used: 164324208370 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 32 (16.9 bits)
|
PSORT |
|
VS (DIR, S) |
2 |
VH (FL, L) |
0 |
VF (FL, S) |
2 |
AH (FL, L) |
0 |
AF (FL, S) |
0 |
SL (DIR, L) |
0 |
SS (DIR, S) |
2 |
SH (FL, L) |
0 |
SF (FL, S) |
7 |
CH (FL, L) |
1 |
CF (FL, S) |
4 |
FCL (DIR, L) |
0 |
FC (DIR, S) |
0 |
FC-IC (SUB) |
0 |