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Dicty_cDB
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NBDC - LSDB Archive
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Dicty_cDB
Contig List | Clone List | cDNA Library List
Atlas
Atlas | Atlas Image List
Contig-U14161-1
Contig ID Contig-U14161-1
Contig update 2002.12.18
Contig sequence 
>Contig-U14161-1 (Contig-U14161-1Q) /CSM_Contig/Contig-U14161-1Q.Seq.d
AAATTTTTTTTTTATTTTCTTTTTTTTTATTTTTTTTTATTTTTTAATTT
TTATTTTTAAAAATTATCATTTAATAATGACAAANAAAATCAAATTATCA
AATTCANAATCAAATAAAGTTAATAATAATAATAATAATAATCATGGAAA
NGGTCATAACCATAATCATAGTCATAACCATGGNGAAATGNGTCATGGTC
ATGGTATAATTGGAATAGNGGATAGCGTTNCAGGNGAAAATATTATTCAA
GTGAATGGTGAAAATTTACGAAGTGTACCAAATGGTCATTCATTAATACA
TAATATTAATAGTATTATCAATAGTCATAGTAAACATGGTAAAATTAAAA
ATATTTTAAAAGATTCAACTATTATATCAAGTTCTATAAATTTAAGTGAT
AAACCAATAAATAAAATCACTGAAGAAAATTCACCACCTTCATCACCAAC
ATTATCATCATCAACTAATACAACAACTGATAGACAAGAACTACCACAAC
AACAACAACC
Gap no gap
Contig length 510
Chromosome number (1..6, M) 4
Chromosome length 5430582
Start point 1481755
End point 1482265
Strand (PLUS/MINUS) PLUS
Number of clones 1
Number of EST 2
Link to clone list U14161
List of clone(s) 

est1=AHR433F,1,482
est2=AHR433Z,237,510
Translated Amino Acid sequence 
NFFFIFFFFIFFYFLIFIFKNYHLIMTXKIKLSNSXSNKVNNNNNNNHGXGHNHNHSHNH
GEMXHGHGIIGIXDSVXGENIIQVNGENLRSVPNGHSLIHNINSIINSHSKHGKIKNILK
DSTIISSSINLSDKPINKITEENSPPSSPTLSSSTNTTTDRQELPQQQQ
Translated Amino Acid sequence (All Frames) 
Frame A:
kfffyflffyfflffnfyf*klsfnndkxnqiikfxik*s*******swkxs*p*s*s*p
wxnxswswynwnxg*rxrxkyyssew*kftkctkwsfint*y**yyq*s**tw*n*kyfk
rfnyyikfykfk**tnk*nh*rkfttfitniiiin*ynn**trttttttt


Frame B:
NFFFIFFFFIFFYFLIFIFKNYHLIMTXKIKLSNSXSNKVNNNNNNNHGXGHNHNHSHNH
GEMXHGHGIIGIXDSVXGENIIQVNGENLRSVPNGHSLIHNINSIINSHSKHGKIKNILK
DSTIISSSINLSDKPINKITEENSPPSSPTLSSSTNTTTDRQELPQQQQ


Frame C:
ifflfsfflfffif*flflkiii***qxksnyqixnqikliiiiiiimexvitiiivitm
xkxvmvmv*le*xiaxqxkilfk*mvkiyevyqmvih*yiilivlsivivnmvklkif*k
iqllyqvl*i*vinq*ikslkkihhlhhqhyhhqliqqlidknyhnnnn
own update 2004. 6.10
Homology vs CSM-cDNA 
Query= Contig-U14161-1 (Contig-U14161-1Q)
/CSM_Contig/Contig-U14161-1Q.Seq.d
         (510 letters)

Database: CSM
           6905 sequences; 5,674,871 total letters


                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

Contig-U14161-1 (Contig-U14161-1Q) /CSM_Contig/Conti...   694  0.0
Contig-U13976-1 (Contig-U13976-1Q) /CSM_Contig/Conti...    46  4e-05
Contig-U10650-1 (Contig-U10650-1Q) /CSM_Contig/Conti...    44  1e-04
Contig-U04960-1 (Contig-U04960-1Q) /CSM_Contig/Conti...    42  6e-04
Contig-U01792-1 (Contig-U01792-1Q) /CSM_Contig/Conti...    42  6e-04
Contig-U00987-1 (Contig-U00987-1Q) /CSM_Contig/Conti...    42  6e-04
Contig-U12755-1 (Contig-U12755-1Q) /CSM_Contig/Conti...    40  0.002
Contig-U11475-1 (Contig-U11475-1Q) /CSM_Contig/Conti...    40  0.002
Contig-U11052-1 (Contig-U11052-1Q) /CSM_Contig/Conti...    40  0.002
Contig-U03849-1 (Contig-U03849-1Q) /CSM_Contig/Conti...    40  0.002

>Contig-U14161-1 (Contig-U14161-1Q) /CSM_Contig/Contig-U14161-1Q.Seq.d
          Length = 510

 Score =  694 bits (350), Expect = 0.0
 Identities = 368/368 (100%)
 Strand = Plus / Plus

                                                                       
Query: 143 catggaaanggtcataaccataatcatagtcataaccatggngaaatgngtcatggtcat 202
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 143 catggaaanggtcataaccataatcatagtcataaccatggngaaatgngtcatggtcat 202

                                                                       
Query: 203 ggtataattggaatagnggatagcgttncaggngaaaatattattcaagtgaatggtgaa 262
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 203 ggtataattggaatagnggatagcgttncaggngaaaatattattcaagtgaatggtgaa 262

                                                                       
Query: 263 aatttacgaagtgtaccaaatggtcattcattaatacataatattaatagtattatcaat 322
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 aatttacgaagtgtaccaaatggtcattcattaatacataatattaatagtattatcaat 322

                                                                       
Query: 323 agtcatagtaaacatggtaaaattaaaaatattttaaaagattcaactattatatcaagt 382
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 agtcatagtaaacatggtaaaattaaaaatattttaaaagattcaactattatatcaagt 382

                                                                       
Query: 383 tctataaatttaagtgataaaccaataaataaaatcactgaagaaaattcaccaccttca 442
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 tctataaatttaagtgataaaccaataaataaaatcactgaagaaaattcaccaccttca 442

                                                                       
Query: 443 tcaccaacattatcatcatcaactaatacaacaactgatagacaagaactaccacaacaa 502
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 tcaccaacattatcatcatcaactaatacaacaactgatagacaagaactaccacaacaa 502

                   
Query: 503 caacaacc 510
           ||||||||
Sbjct: 503 caacaacc 510


>Contig-U13976-1 (Contig-U13976-1Q) /CSM_Contig/Contig-U13976-1Q.Seq.d
          Length = 1883

 Score = 46.1 bits (23), Expect = 4e-05
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                      
Query: 484 acaagaactaccacaacaacaacaacc 510
           |||| ||||||||||||||||||||||
Sbjct: 300 acaacaactaccacaacaacaacaacc 326


 Score = 28.2 bits (14), Expect = 8.6
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                          
Query: 496  acaacaacaacaac 509
            ||||||||||||||
Sbjct: 1085 acaacaacaacaac 1098


 Score = 28.2 bits (14), Expect = 8.6
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                          
Query: 496  acaacaacaacaac 509
            ||||||||||||||
Sbjct: 1088 acaacaacaacaac 1101


 Score = 28.2 bits (14), Expect = 8.6
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                         
Query: 493 accacaacaacaac 506
           ||||||||||||||
Sbjct: 294 accacaacaacaac 307


>Contig-U10650-1 (Contig-U10650-1Q) /CSM_Contig/Contig-U10650-1Q.Seq.d
          Length = 662

 Score = 44.1 bits (22), Expect = 1e-04
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 484 acaagaactaccacaacaacaacaac 509
           |||| |||||||||||||||||||||
Sbjct: 466 acaacaactaccacaacaacaacaac 491


 Score = 28.2 bits (14), Expect = 8.6
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                         
Query: 496 acaacaacaacaac 509
           ||||||||||||||
Sbjct: 103 acaacaacaacaac 116


 Score = 28.2 bits (14), Expect = 8.6
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                         
Query: 496 acaacaacaacaac 509
           ||||||||||||||
Sbjct: 481 acaacaacaacaac 494


 Score = 28.2 bits (14), Expect = 8.6
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                         
Query: 496 acaacaacaacaac 509
           ||||||||||||||
Sbjct: 106 acaacaacaacaac 119


  Database: CSM
    Posted date:  Jun 9, 2004  7:35 PM
  Number of letters in database: 5,674,871
  Number of sequences in database:  6905
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 18,160
Number of Sequences: 6905
Number of extensions: 18160
Number of successful extensions: 6449
Number of sequences better than 10.0: 1248
length of query: 510
length of database: 5,674,871
effective HSP length: 16
effective length of query: 494
effective length of database: 5,564,391
effective search space: 2748809154
effective search space used: 2748809154
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 14 (28.2 bits)
dna update 2008.12.18
Homology vs DNA 
Query= Contig-U14161-1 (Contig-U14161-1Q) /CSM_Contig/Contig-U14161-1Q.Seq.d
         (510 letters)

Database: ddbj_A
           92,845,959 sequences; 95,242,211,685 total letters

Searching..................................................done

                                                             Score    E
Sequences producing significant alignments:                  (bits) Value  N

(BJ339413) Dictyostelium discoideum cDNA clone:dda65b10, 5' ...   585   e-163  1
(BJ357944) Dictyostelium discoideum cDNA clone:dda65b10, 3' ...   525   e-145  1
(AC116957) Dictyostelium discoideum chromosome 2 map 1685067...    40   2e-04  7
(AC098037) Rattus norvegicus clone CH230-90F19, *** SEQUENCI...    46   0.001  2
(EL489562) CHUS4712.b2_P01.ab1 CHU(LMS) puzzle sunflower Hel...    56   0.001  1
(EL484146) CHUM5998.b1_K12.ab1 CHU(LMS) puzzle sunflower Hel...    56   0.001  1
(AC116979) Dictyostelium discoideum chromosome 2 map 6445720...    40   0.002  7
(BJ348650) Dictyostelium discoideum cDNA clone:dda33k23, 3' ...    36   0.004  2
(FE780068) CCAG11292.g1 CCAG Petrolisthes cinctipes heart, g...    30   0.004  3
(BJ357125) Dictyostelium discoideum cDNA clone:dda62e14, 3' ...    36   0.004  2
(AC184329) Strongylocentrotus purpuratus clone R3-3065B3, WO...    48   0.014  4
(AY170918) Dictyostelium discoideum pats1 gene, partial cds.       52   0.020  1
(AC068142) Mus musculus strain C57BL6/J chromosome 5 clone R...    52   0.020  1
(EY311137) CAWX23304.fwd CAWX Helobdella robusta Primary Ear...    46   0.041  2
(AC020618) Mus musculus strain C57BL/6J clone RP23-3P24, WOR...    38   0.048  2
(AC167221) Mus musculus 10 BAC RP23-3P24 (Roswell Park Cance...    38   0.048  2
(AC161373) Mus musculus BAC clone RP23-308E4 from chromosome...    40   0.048  2
(AC153904) Mus musculus clone RP23-208M24, WORKING DRAFT SEQ...    38   0.048  2
(AC166082) Mus musculus 10 BAC RP23-150M2 (Roswell Park Canc...    38   0.049  2
(AC115911) Mus musculus chromosome 6, clone RP24-481I20, com...    40   0.049  2
(AC214629) Populus trichocarpa clone POP050-E16, complete se...    50   0.049  2
(AC117080) Dictyostelium discoideum chromosome 2 map complem...    36   0.050  6
(CU467071) Zebrafish DNA sequence from clone DKEY-244L20 in ...    42   0.053  5
(DH497741) Monosiga ovata DNA, fosmid clone: MOF-063H23, gen...    36   0.061  2
(AC108448) Homo sapiens chromosome 11, clone CTD-2544D21, co...    50   0.078  1
(AC168712) Strongylocentrotus purpuratus clone R3-3011G10, W...    50   0.078  1
(AC016765) Homo sapiens chromosome 11 clone RP11-555F1, WORK...    50   0.078  1
(AC116960) Dictyostelium discoideum chromosome 2 map complem...    38   0.090  8
(AC116986) Dictyostelium discoideum chromosome 2 map 2234041...    36   0.11   6
(AC114261) Dictyostelium discoideum chromosome 2 map 126059-...    34   0.11   6
(AC180522) Strongylocentrotus purpuratus clone R3-3099D09, W...    40   0.14   3
(AU074303) Dictyostelium discoideum slug cDNA, clone SSK294.       36   0.17   2
(AC113756) Rattus norvegicus clone CH230-195D20, WORKING DRA...    38   0.18   2
(AC123144) Rattus norvegicus clone CH230-247A12, WORKING DRA...    38   0.18   2
(AC215830) Rattus norvegicus clone CH230-252M4, WORKING DRAF...    38   0.18   2
(CR925728) Zebrafish DNA sequence from clone DKEY-96G2 in li...    36   0.18   2
(AC199306) Spermophilus tridecemlineatus clone VMRC20-73L23,...    40   0.19   3
(DY885579) CeleSEQ877 Cunninghamella elegans pBluescript (Ec...    34   0.23   2
(DX397088) GE__Sa0085F12.b1 Gossypium exiguum WGS library Go...    36   0.23   2
(EH014645) USDA-FP_187325 Lysiphlebus testaceipes adult whol...    34   0.23   2
(DH487330) Monosiga ovata DNA, fosmid clone: MOF-045A14, gen...    36   0.24   2
(AC116330) Dictyostelium discoideum chromosome 2 map 3191214...    38   0.25   5
(AC127896) Rattus norvegicus clone CH230-209J18, *** SEQUENC...    48   0.31   1
(AC118995) Rattus norvegicus clone CH230-280M1, *** SEQUENCI...    48   0.31   1
(AC117369) Rattus norvegicus clone CH230-444I18, WORKING DRA...    48   0.31   1
(CU469552) Medicago truncatula chromosome 5 clone mth2-190a9...    48   0.31   1
(AC196669) Macaca mulatta clone CH250-215N15, WORKING DRAFT ...    48   0.31   1
(AC184353) Strongylocentrotus purpuratus clone R3-3115G18, W...    48   0.31   1
(AC180878) Strongylocentrotus purpuratus clone R3-3067P10, W...    48   0.31   1
(AC180849) Strongylocentrotus purpuratus clone R3-3067P14, W...    48   0.31   1
(AC180275) Strongylocentrotus purpuratus clone R3-3123O09, W...    48   0.31   1
(ED443104) AUAC-aam36c06.g1 Ascaris suum whole genome shotgu...    48   0.31   1
(ED131030) AUAC-aat51a07.g1 Ascaris suum whole genome shotgu...    48   0.31   1
(DU429003) 1098448328913 CHORI-243 Ovis aries genomic clone ...    48   0.31   1
(AL202518) Tetraodon nigroviridis genome survey sequence T7 ...    48   0.31   1
(AG780193) Macaca fuscata fuscata DNA, clone: MSB2-260P17_F,...    48   0.31   1
(AG690738) Macaca fuscata fuscata DNA, clone: MSB2-124G22_F,...    48   0.31   1
(CC086719) CSU-K33r.40C3.T7 CSU-K33r Aedes aegypti genomic c...    48   0.31   1
(EB624015) AGENCOURT_56948875 D. grimshawi EST Drosophila gr...    48   0.31   1
(AV204300) Mus musculus adult female placenta cDNA, RIKEN fu...    48   0.31   1
(AV034430) Mus musculus adult female placenta cDNA, partial ...    48   0.31   1
(AV034200) Mus musculus adult female placenta cDNA, partial ...    48   0.31   1
(DN570967) 93808380 Sea Urchin primary mesenchyme cell cDNA ...    48   0.31   1
(BX571705) Zebrafish DNA sequence from clone DKEY-261E22 in ...    40   0.33   5
(CT841541) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f...    42   0.35   4
(AC084611) Caenorhabditis briggsae cosmid G44D16, complete s...    46   0.35   2
(AC116977) Dictyostelium discoideum chromosome 2 map 5515173...    34   0.37   7
(AC179824) Strongylocentrotus purpuratus clone R3-1012N7, WO...    36   0.43   4
(AC181419) Strongylocentrotus purpuratus clone R3-50C24, WOR...    40   0.44   4
(AC224526) Bos taurus clone CH240-482J24, WORKING DRAFT SEQU...    42   0.45   2
(AC097923) Rattus norvegicus clone CH230-47M10, WORKING DRAF...    42   0.49   3
(AC103069) Rattus norvegicus clone CH230-171I18, *** SEQUENC...    40   0.52   2
(EK295713) 1095462346520 Global-Ocean-Sampling_GS-31-01-01-1...    40   0.53   2
(CP000029) Staphylococcus epidermidis RP62A, complete genome.      34   0.56   2
(AE015929) Staphylococcus epidermidis ATCC 12228, complete g...    34   0.56   2
(AC116984) Dictyostelium discoideum chromosome 2 map 2567470...    36   0.59   7
(ET858476) CHO_OF156xf06f2.ab1 CHO_OF Nicotiana tabacum geno...    42   0.59   2
(AC180185) Strongylocentrotus purpuratus clone R3-4001P17, W...    40   0.59   3
(AC197483) Zea mays chromosome 4 clone CH201-346B4; ZMMBBc03...    36   0.61   5
(AC099211) Rattus norvegicus chromosome 18 clone CH230-34E17...    36   0.61   2
(AJ314911) Dictyostelium discoideum DrnA gene for putative R...    34   0.62   3
(AC103298) Rattus norvegicus clone CH230-75J23, *** SEQUENCI...    36   0.64   2
(AC107441) Rattus norvegicus clone CH230-12P8, *** SEQUENCIN...    36   0.64   2
(AC094753) Rattus norvegicus clone CH230-5I11, *** SEQUENCIN...    36   0.64   2
(AC127143) Rattus norvegicus clone CH230-202M16, *** SEQUENC...    36   0.64   2
(AC107618) Rattus norvegicus clone CH230-1H12, *** SEQUENCIN...    36   0.64   2
(AC108528) Rattus norvegicus clone CH230-6G9, *** SEQUENCING...    36   0.64   2
(AC117075) Dictyostelium discoideum chromosome 2 map 5201047...    36   0.64   2
(AE014818) Plasmodium falciparum 3D7 chromosome 14 section 3...    36   0.64   2
(AC128158) Rattus norvegicus clone CH230-58K16, *** SEQUENCI...    36   0.64   2
(AC098282) Rattus norvegicus clone CH230-1H2, *** SEQUENCING...    36   0.64   2
(AC111363) Rattus norvegicus clone CH230-88F9, *** SEQUENCIN...    36   0.65   2
(AC127098) Rattus norvegicus clone CH230-216A12, WORKING DRA...    36   0.65   2
(AC107138) Rattus norvegicus clone CH230-99O9, *** SEQUENCIN...    36   0.65   2
(AC110957) Rattus norvegicus clone CH230-189O11, *** SEQUENC...    36   0.65   2
(AC098271) Rattus norvegicus clone CH230-1L18, *** SEQUENCIN...    36   0.65   2
(AC116921) Dictyostelium discoideum chromosome 2 map 4624505...    38   0.65   3
(AC130445) Rattus norvegicus clone CH230-277A23, *** SEQUENC...    36   0.65   2
(AL671894) Mouse DNA sequence from clone RP23-316M11 on chro...    34   0.65   2
(AC200352) Echinops telfairi clone CH238-46I11, WORKING DRAF...    34   0.65   2

>(BJ339413) Dictyostelium discoideum cDNA clone:dda65b10, 5' end,
           single read.
          Length = 482

 Score =  585 bits (295), Expect = e-163
 Identities = 331/340 (97%)
 Strand = Plus / Plus


Query: 143 catggaaanggtcataaccataatcatagtcataaccatggngaaatgngtcatggtcat 202
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 143 catggaaanggtcataaccataatcatagtcataaccatggngaaatgngtcatggtcat 202


Query: 203 ggtataattggaatagnggatagcgttncaggngaaaatattattcaagtgaatggtgaa 262
           ||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||
Sbjct: 203 ggtataattggaatagnggatagcgttncaggngaaaatattattcaagngaatggngaa 262


Query: 263 aatttacgaagtgtaccaaatggtcattcattaatacataatattaatagtattatcaat 322
           ||||||| ||| || ||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 263 aatttacnaagngtnccaaanggtcattcattaatacataatattaatagtattatcaat 322


Query: 323 agtcatagtaaacatggtaaaattaaaaatattttaaaagattcaactattatatcaagt 382
           ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 323 agtcatagtaaacatggtaaaattaaaaatattttaaaanattcaactattatatcaagt 382


Query: 383 tctataaatttaagtgataaaccaataaataaaatcactgaagaaaattcaccaccttca 442
           |||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 383 tctataaatttaagngataaaccaataaataaaatcactgaanaaaattcaccaccttca 442


Query: 443 tcaccaacattatcatcatcaactaatacaacaactgata 482
           ||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 tcaccaacattatcatcatcaactaatacaacaactgata 482

Lambda     K      H
    1.37    0.711     1.31

Matrix: blastn matrix:1 -3
Number of Sequences: 92845959
Number of Hits to DB: 473,619,478
Number of extensions: 38956305
Number of successful extensions: 5510484
Number of sequences better than 10.0: 639
Length of query: 510
Length of database: 95,242,211,685
Length adjustment: 23
Effective length of query: 487
Effective length of database: 93,106,754,628
Effective search space: 45342989503836
Effective search space used: 45342989503836
X1: 11 (21.8 bits)
S2: 21 (42.1 bits)
protein update 2009. 7.10
Homology vs Protein 
Query= Contig-U14161-1 (Contig-U14161-1Q) /CSM_Contig/Contig-U14161-1Q.Seq.d
         (510 letters)

Database: nrp_B
           3,236,559 sequences; 1,051,180,864 total letters

Searching..................................................done

 ***** No hits found ******

Lambda     K      H
   0.318    0.134    0.401

Gapped
Lambda     K      H
   0.267   0.0410    0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3236559
Number of Hits to DB: 280,322,323
Number of extensions: 2080243
Number of successful extensions: 2505
Number of sequences better than 10.0: 0
Number of HSP's gapped: 2505
Number of HSP's successfully gapped: 0
Length of query: 170
Length of database: 1,051,180,864
Length adjustment: 119
Effective length of query: 51
Effective length of database: 666,030,343
Effective search space: 33967547493
Effective search space used: 33967547493
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 30 (16.2 bits)
PSORT 

 psg: 1.06  gvh: 0.41  alm: 0.13  top: 0.70  tms: 0.07  mit: 0.27  mip: 0.00
 nuc: 0.00  erl: 0.00  erm: 0.00  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 1.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 1.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 0.00 

	 48.0 %: nuclear
	 28.0 %: cytoplasmic
	  8.0 %: Golgi
	  8.0 %: mitochondrial
	  4.0 %: plasma membrane
	  4.0 %: vesicles of secretory system

>> prediction for Contig-U14161-1 is nuc
VS (DIR, S) 0
VH (FL, L) 0
VF (FL, S) 0
AH (FL, L) 1
AF (FL, S) 0
SL (DIR, L) 0
SS (DIR, S) 0
SH (FL, L) 0
SF (FL, S) 0
CH (FL, L) 0
CF (FL, S) 0
FCL (DIR, L) 0
FC (DIR, S) 0
FC-IC (SUB) 0