Contig-U14130-1
Contig ID Contig-U14130-1
Contig update 2002.12.18
Contig sequence
>Contig-U14130-1 (Contig-U14130-1Q) /CSM_Contig/Contig-U14130-1Q.Seq.d
ATTTAAATTTTTACACACACAAAGACTTTTTATATTTATTACTATAAATT
ATATATTTCACAAAAAAGTAACAGTTTGAACAAATATGGCTTTAAAGAGA
ATTAATAAAGAATTATCAGATATTGCTAAAGATCCACCATCCAGCTGCAG
TGCTGGTCCAGATACAGATGATATTTTCCATTGGACAGCTACTATTATGG
GTCCAAAAGACTCACCATACGAAGGAGGTGTTTTCTTTTTAAATATTAAT
TTCCCAACAGATTATCCATTTAAACCACCAAAGATTAGTTTTGTTACCAA
AGTTTACCATCCAAATATTAATGCCAGCGGAAGTATTTGTTTAGATATTT
TAAAGGAACAATGGAGTCCAGCCTTAACTATTCCAAAAGTTTTACTTTCA
ATTAGTGCCCTTTTATCTGACCCAAATCCAGATGATCCTCTTGTACCAGA
TATTGCCAATTTATTTAAAACAGACAAAAATAGATTCGAATCTAATGCCC
GTGAGTGGACAAGAAAATATGCACAATAATTTTTCACGAATAGATAAGGC
AACCCAAAAAAAAAAATTTTTTTTGGTGAACGACTAAACTTTTAAAATAA
ACAATAGAAGTTCTGTTACAAATCAAAAAAAAAAAAAAAAAAAAAAA

Gap no gap
Contig length 647
Chromosome number (1..6, M) 5
Chromosome length 5062330
Start point 4205616
End point 4204969
Strand (PLUS/MINUS) MINUS
Number of clones 11
Number of EST 13
Link to clone list U14130
List of clone(s)

est1=VSK389E,-145,635
est2=AHN338E,1,613
est3=VSJ387Z,19,612
est4=VSF889E,21,606
est5=SSL483F,22,318
est6=VSG818F,24,563
est7=VSJ387F,24,568
est8=SSF567E,51,632
est9=SSJ182Z,106,648
est10=VSC717Z,112,638
est11=SSC652Z,116,635
est12=VSJ287F,188,485
est13=SSL483Z,418,635
Translated Amino Acid sequence
fkflhtqrlfifitinyifhkkvtv*TNMALKRINKELSDIAKDPPSSCSAGPDTDDIFH
WTATIMGPKDSPYEGGVFFLNINFPTDYPFKPPKISFVTKVYHPNINASGSICLDILKEQ
WSPALTIPKVLLSISALLSDPNPDDPLVPDIANLFKTDKNRFESNAREWTRKYAQ*fftn
r*gnpkkkiffgerlnf*nkq*kfcykskkkkkkk


Translated Amino Acid sequence (All Frames)
Frame A:
i*ifthtktfyiyyyklyisqksnslnkygfken**riiryc*rstiqlqcwsryr*yfp
ldsyyygskrltirrrcflfky*fpnrlsi*ttkd*fcyqslpsky*cqrkylfryfkgt
messlnysksftfn*cpfi*pksr*ssctrycqfi*nrqk*iri*cp*vdkkictiifhe
*irqpkkknffw*ttkllk*tievllqikkkkkkk


Frame B:
fkflhtqrlfifitinyifhkkvtv*TNMALKRINKELSDIAKDPPSSCSAGPDTDDIFH
WTATIMGPKDSPYEGGVFFLNINFPTDYPFKPPKISFVTKVYHPNINASGSICLDILKEQ
WSPALTIPKVLLSISALLSDPNPDDPLVPDIANLFKTDKNRFESNAREWTRKYAQ*fftn
r*gnpkkkiffgerlnf*nkq*kfcykskkkkkkk


Frame C:
lnfythkdflylll*iiyftkk*qfeqiwl*reliknyqillkihhpaavlvqiqmifsi
gqlllwvqkthhtkevfsf*ilisqqiihlnhqrlvllpkftiqilmpaevfv*if*rnn
gvqp*lfqkfyfqlvpfyltqiqmillyqilpiylkqtkidsnlmpvsgqenmhnnfsri
dkatqkkkfflvnd*tfkinnrssvtnqkkkkkkk


own update 2004. 6.10
Homology vs CSM-cDNA
Query= Contig-U14130-1 (Contig-U14130-1Q)
/CSM_Contig/Contig-U14130-1Q.Seq.d
(647 letters)

Database: CSM
6905 sequences; 5,674,871 total letters


Score E
Sequences producing significant alignments: (bits) Value

Contig-U14130-1 (Contig-U14130-1Q) /CSM_Contig/Conti... 1100 0.0
Contig-U13999-1 (Contig-U13999-1Q) /CSM_Contig/Conti... 52 8e-07
Contig-U04058-1 (Contig-U04058-1Q) /CSM_Contig/Conti... 44 2e-04
Contig-U03567-1 (Contig-U03567-1Q) /CSM_Contig/Conti... 40 0.003
Contig-U11124-1 (Contig-U11124-1Q) /CSM_Contig/Conti... 38 0.011
Contig-U05483-1 (Contig-U05483-1Q) /CSM_Contig/Conti... 38 0.011
Contig-U01121-1 (Contig-U01121-1Q) /CSM_Contig/Conti... 36 0.045
Contig-U14815-1 (Contig-U14815-1Q) /CSM_Contig/Conti... 34 0.18
Contig-U12665-1 (Contig-U12665-1Q) /CSM_Contig/Conti... 34 0.18
Contig-U12576-1 (Contig-U12576-1Q) /CSM_Contig/Conti... 34 0.18

>Contig-U14130-1 (Contig-U14130-1Q) /CSM_Contig/Contig-U14130-1Q.Seq.d
Length = 647

Score = 1100 bits (555), Expect = 0.0
Identities = 555/555 (100%)
Strand = Plus / Plus


Query: 1 atttaaatttttacacacacaaagactttttatatttattactataaattatatatttca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 atttaaatttttacacacacaaagactttttatatttattactataaattatatatttca 60


Query: 61 caaaaaagtaacagtttgaacaaatatggctttaaagagaattaataaagaattatcaga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 caaaaaagtaacagtttgaacaaatatggctttaaagagaattaataaagaattatcaga 120


Query: 121 tattgctaaagatccaccatccagctgcagtgctggtccagatacagatgatattttcca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tattgctaaagatccaccatccagctgcagtgctggtccagatacagatgatattttcca 180


Query: 181 ttggacagctactattatgggtccaaaagactcaccatacgaaggaggtgttttcttttt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ttggacagctactattatgggtccaaaagactcaccatacgaaggaggtgttttcttttt 240


Query: 241 aaatattaatttcccaacagattatccatttaaaccaccaaagattagttttgttaccaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 aaatattaatttcccaacagattatccatttaaaccaccaaagattagttttgttaccaa 300


Query: 301 agtttaccatccaaatattaatgccagcggaagtatttgtttagatattttaaaggaaca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 agtttaccatccaaatattaatgccagcggaagtatttgtttagatattttaaaggaaca 360


Query: 361 atggagtccagccttaactattccaaaagttttactttcaattagtgcccttttatctga 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 atggagtccagccttaactattccaaaagttttactttcaattagtgcccttttatctga 420


Query: 421 cccaaatccagatgatcctcttgtaccagatattgccaatttatttaaaacagacaaaaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 cccaaatccagatgatcctcttgtaccagatattgccaatttatttaaaacagacaaaaa 480


Query: 481 tagattcgaatctaatgcccgtgagtggacaagaaaatatgcacaataatttttcacgaa 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 tagattcgaatctaatgcccgtgagtggacaagaaaatatgcacaataatttttcacgaa 540


Query: 541 tagataaggcaaccc 555
|||||||||||||||
Sbjct: 541 tagataaggcaaccc 555


Score = 99.6 bits (50), Expect = 4e-21
Identities = 50/50 (100%)
Strand = Plus / Plus


Query: 575 ggtgaacgactaaacttttaaaataaacaatagaagttctgttacaaatc 624
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 575 ggtgaacgactaaacttttaaaataaacaatagaagttctgttacaaatc 624


>Contig-U13999-1 (Contig-U13999-1Q) /CSM_Contig/Contig-U13999-1Q.Seq.d
Length = 836

Score = 52.0 bits (26), Expect = 8e-07
Identities = 35/38 (92%)
Strand = Plus / Plus


Query: 335 atttgtttagatattttaaaggaacaatggagtccagc 372
|||||||||||||||||||| || |||||||||||||
Sbjct: 286 atttgtttagatattttaaaagataaatggagtccagc 323


Score = 36.2 bits (18), Expect = 0.045
Identities = 18/18 (100%)
Strand = Plus / Plus


Query: 421 cccaaatccagatgatcc 438
||||||||||||||||||
Sbjct: 372 cccaaatccagatgatcc 389


>Contig-U04058-1 (Contig-U04058-1Q) /CSM_Contig/Contig-U04058-1Q.Seq.d
Length = 505

Score = 44.1 bits (22), Expect = 2e-04
Identities = 43/50 (86%)
Strand = Plus / Plus


Query: 305 taccatccaaatattaatgccagcggaagtatttgtttagatattttaaa 354
||||||||||| ||| || | | ||| || ||||||||||||||||||||
Sbjct: 245 taccatccaaacattgatacaaacggcagaatttgtttagatattttaaa 294


Database: CSM
Posted date: Jun 9, 2004 7:35 PM
Number of letters in database: 5,674,871
Number of sequences in database: 6905

Lambda K H
1.37 0.711 1.31

Gapped
Lambda K H
1.37 0.711 1.31


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 10,087
Number of Sequences: 6905
Number of extensions: 10087
Number of successful extensions: 1200
Number of sequences better than 10.0: 149
length of query: 647
length of database: 5,674,871
effective HSP length: 16
effective length of query: 631
effective length of database: 5,564,391
effective search space: 3511130721
effective search space used: 3511130721
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 15 (30.2 bits)
dna update 2008.12.18
Homology vs DNA
Query= Contig-U14130-1 (Contig-U14130-1Q) /CSM_Contig/Contig-U14130-1Q.Seq.d
(647 letters)

Database: ddbj_A
92,845,959 sequences; 95,242,211,685 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value N

(BJ337428) Dictyostelium discoideum cDNA clone:dda57l09, 5' ... 1100 0.0 2
(BJ355534) Dictyostelium discoideum cDNA clone:dda57l09, 3' ... 1076 0.0 2
(AU265955) Dictyostelium discoideum vegetative cDNA clone:VS... 1053 0.0 2
(C92639) Dictyostelium discoideum slug cDNA, clone SSF567. 1001 0.0 2
(AU265956) Dictyostelium discoideum vegetative cDNA clone:VS... 967 0.0 4
(AU269844) Dictyostelium discoideum vegetative cDNA clone:VS... 948 0.0 2
(AU266836) Dictyostelium discoideum vegetative cDNA clone:VS... 1003 0.0 2
(AU269845) Dictyostelium discoideum vegetative cDNA clone:VS... 965 0.0 2
(AU262746) Dictyostelium discoideum vegetative cDNA clone:VS... 884 0.0 2
(C84078) Dictyostelium discoideum slug cDNA, clone SSC652. 864 0.0 2
(C90817) Dictyostelium discoideum slug cDNA, clone SSJ182. 440 0.0 4
(AU269702) Dictyostelium discoideum vegetative cDNA clone:VS... 543 e-150 1
(AU074666) Dictyostelium discoideum slug cDNA, clone SSL483. 476 e-130 1
(AU038790) Dictyostelium discoideum slug cDNA, clone SSL483. 274 9e-93 2
(EH431858) NPE00000055 Neocallimastix patriciarum ZAP II cDN... 74 2e-41 6
(EC822481) SME00002658 esmbsro2 Sawyeria marylandensis cDNA,... 111 1e-35 6
(EH431342) NPE00000648 Neocallimastix patriciarum ZAP II cDN... 62 5e-29 5
(AM054633) Isotricha prostoma EST, clone Ip07_C10. 76 3e-26 4
(AM054632) Isotricha prostoma EST, clone Ip05_C10. 76 3e-26 4
(EL905087) G5To3_2_F06.g1_A006 G5 tomites: 1.25 - 3 kb fract... 78 5e-25 4
(AQ842837) CpG1269B CpIOWAgDNA1 Cryptosporidium parvum genom... 64 3e-24 5
(DB732863) Apis mellifera head cDNA, RIKEN full-length enric... 54 1e-19 5
(EJ370590) 1092963723114 Global-Ocean-Sampling_GS-28-01-01-1... 70 1e-19 3
(EJ525203) 1092955180872 Global-Ocean-Sampling_GS-29-01-01-1... 54 2e-19 4
(DB735525) Apis mellifera head cDNA, RIKEN full-length enric... 54 2e-19 5
(DB747011) Apis mellifera head cDNA, RIKEN full-length enric... 54 3e-19 5
(BI506579) BB170023A20G10.5 Bee Brain Normalized/Subtracted ... 54 4e-19 5
(BI507129) BB170024A20H01.5 Bee Brain Normalized/Subtracted ... 54 6e-19 5
(BI505480) BB170031A10H04.5 Bee Brain Normalized/Subtracted ... 54 6e-19 5
(BI509967) BB170026A10F07.5 Bee Brain Normalized/Subtracted ... 54 6e-19 5
(EA366228) Sequence 1079 from patent US 7309815. 66 5e-18 3
(EA367287) Sequence 2138 from patent US 7309815. 66 9e-18 3
(EA367159) Sequence 2010 from patent US 7309815. 66 9e-18 3
(FD422701) RT00017R_T3_017_H02_31MAY2004_002_ab1 CrUniGene r... 48 1e-17 4
(FD424492) RT00038R_T3_038_G10_01JUN2004_068_ab1 CrUniGene r... 48 1e-17 4
(FD424407) RT00037R_T3_037_G10_02JUN2004_068_ab1 CrUniGene r... 48 1e-17 4
(FG645078) TT-38_N14 K326 late senescent leaf library Nicoti... 66 3e-17 3
(BJ940189) Cryptomeria japonica pollen cDNA, clone:CP12244, ... 44 5e-17 5
(DW003773) KR3B.106M20F.051109T7 KR3B Nicotiana tabacum cDNA... 64 8e-17 3
(BP749171) Nicotiana sylvestris mRNA, expressed in root, clo... 54 8e-17 3
(FG644931) TT-35_M01 K326 late senescent leaf library Nicoti... 64 8e-17 3
(DW001218) KL4B.110H22F.051106T7 KL4B Nicotiana tabacum cDNA... 64 9e-17 3
(EH613924) EST_CSP004xg04f1.ab1 EST_CSP Nicotiana tabacum cD... 64 9e-17 3
(EB443177) KR2B.001G22F.050815T7 KR2B Nicotiana tabacum cDNA... 64 9e-17 3
(FG633370) TT-23_H24 tobacco leaf library Nicotiana tabacum ... 64 1e-16 3
(EB451946) KT7C.113A01F.051221T7 KT7 Nicotiana tabacum cDNA ... 64 1e-16 3
(EJ635791) 1092990702447 Global-Ocean-Sampling_GS-29-01-01-1... 50 1e-16 3
(EJ607591) 1092962019754 Global-Ocean-Sampling_GS-29-01-01-1... 50 1e-16 3
(EB438879) KN6B.101P15F.051230T7 KN6B Nicotiana tabacum cDNA... 64 1e-16 3
(FG644874) TT-34_K05 K326 late senescent leaf library Nicoti... 64 1e-16 3
(FG633344) TT-23_C08 tobacco leaf library Nicotiana tabacum ... 64 1e-16 3
(AR550131) Sequence 5262 from patent US 6747137. 68 1e-16 3
(FG639653) TT-29_N18 Burley21 trichome library Nicotiana tab... 64 1e-16 3
(DW002940) KR3B.104F24F.051108T7 KR3B Nicotiana tabacum cDNA... 64 1e-16 3
(DV999441) KL4B.103A12F.051103T7 KL4B Nicotiana tabacum cDNA... 64 1e-16 3
(DV999992) KL4B.104J07F.051104T7 KL4B Nicotiana tabacum cDNA... 64 1e-16 3
(EB681524) KL4B.113L23F.060131T7 KL4B Nicotiana tabacum cDNA... 64 1e-16 3
(EB438862) KN6B.101O22F.051230T7 KN6B Nicotiana tabacum cDNA... 64 1e-16 3
(EB438428) KN6B.100M05F.051019T7 KN6B Nicotiana tabacum cDNA... 64 1e-16 3
(FG635364) TT-01_C10 Samsun trichome library Nicotiana tabac... 64 1e-16 3
(EH622120) CHO_SL013xa13f1.ab1 CHO_SL Nicotiana tabacum cDNA... 64 1e-16 3
(EH613904) EST_CSP004xc10f1.ab1 EST_CSP Nicotiana tabacum cD... 64 1e-16 3
(FG176788) AGN_RNC119xe17f1.ab1 AGN_RNC Nicotiana tabacum cD... 64 1e-16 3
(EB677613) KG9B.102E05F.051126T7 KG9B Nicotiana tabacum cDNA... 64 1e-16 3
(EB677495) KG9B.101P02F.060120T7 KG9B Nicotiana tabacum cDNA... 64 1e-16 3
(FD466069) LARWF80TR Haematobia irritans 1st Instar Larvae H... 54 2e-16 5
(FD461673) LARVN37TR Haematobia irritans 1st Instar Larvae H... 54 2e-16 5
(FD453018) EGGAL16TR Haematobia irritans eggs Haematobia irr... 54 2e-16 5
(FD458909) LARV587TF Haematobia irritans 1st Instar Larvae H... 54 2e-16 5
(FF427384) G142P60075RB12.T0 Acorn worm juvenile pCMVSport6 ... 54 3e-16 3
(FD458910) LARV587TR Haematobia irritans 1st Instar Larvae H... 54 3e-16 5
(FF461245) G50P6076RH12.T0 Acorn worm gastrula/neurula pCMVS... 54 3e-16 3
(FF431635) G142P60136RD6.T0 Acorn worm juvenile pCMVSport6 l... 54 3e-16 3
(FD459127) LARV718TR Haematobia irritans 1st Instar Larvae H... 54 3e-16 5
(FF481746) G613P6318RE12.T0 Acorn worm blastula/gastrula pCM... 54 3e-16 3
(FD466068) LARWF80TF Haematobia irritans 1st Instar Larvae H... 54 3e-16 5
(FG643742) TT-10_B08 K326 late senescent leaf library Nicoti... 64 4e-16 3
(BI505398) BB170020A10G06.5 Bee Brain Normalized/Subtracted ... 54 8e-16 4
(EB691458) NecGex_168H04 Ornamental tobacco (LxS8) Stage 6 F... 56 5e-15 3
(EB696628) NecGex_316C10 Ornamental tobacco (LxS8) post-fert... 56 5e-15 3
(DB753766) Apis mellifera head cDNA, RIKEN full-length enric... 54 6e-15 4
(DY033715) zfi02-11ms1-g01 Zfi02 Zamia fischeri cDNA clone z... 48 6e-15 3
(DB751269) Apis mellifera head cDNA, RIKEN full-length enric... 54 6e-15 4
(DB730175) Apis mellifera head cDNA, RIKEN full-length enric... 54 7e-15 4
(DB751499) Apis mellifera head cDNA, RIKEN full-length enric... 54 7e-15 4
(DB740213) Apis mellifera head cDNA, RIKEN full-length enric... 54 7e-15 4
(DY371909) ZO__Ef0005F06.f ZO__Ef Zingiber officinale cDNA c... 42 8e-15 4
(CV042979) dba13a05.y1 Drosophila simulans testis pSport1 li... 52 1e-14 3
(FD461672) LARVN37TF Haematobia irritans 1st Instar Larvae H... 54 1e-14 5
(EB689706) NecGex_129D11 Ornamental tobacco (LxS8) Stage 6 F... 56 2e-14 3
(CO286529) EK063123.5prime Exelixis FlyTag CK01 pCDNA-SK+ Dr... 52 2e-14 3
(EC080687) 72609 CK01 Drosophila melanogaster cDNA clone CK0... 52 2e-14 3
(AR080312) Sequence 3 from patent US 5968761. 60 2e-14 3
(AR003643) Sequence 3 from patent US 5744343. 60 2e-14 3
(L37383) Candida albicans UBC4 mRNA fragment. 60 2e-14 3
(CV042868) dba12f04.y2 Drosophila simulans testis pSport1 li... 52 2e-14 3
(AA695372) GM02710.5prime GM Drosophila melanogaster ovary B... 52 3e-14 3
(EC195547) 45288 CK01 Drosophila melanogaster cDNA clone CK0... 52 3e-14 3
(CO190583) EK048723.5prime Exelixis FlyTag CK01 pCDNA-SK+ Dr... 52 3e-14 3
(AI061813) LD34950.5prime LD Drosophila melanogaster embryo ... 52 6e-14 3

>(BJ337428) Dictyostelium discoideum cDNA clone:dda57l09, 5' end,
single read.
Length = 601

Score = 1100 bits (555), Expect(2) = 0.0
Identities = 555/555 (100%)
Strand = Plus / Plus


Query: 1 atttaaatttttacacacacaaagactttttatatttattactataaattatatatttca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 atttaaatttttacacacacaaagactttttatatttattactataaattatatatttca 60


Query: 61 caaaaaagtaacagtttgaacaaatatggctttaaagagaattaataaagaattatcaga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 caaaaaagtaacagtttgaacaaatatggctttaaagagaattaataaagaattatcaga 120


Query: 121 tattgctaaagatccaccatccagctgcagtgctggtccagatacagatgatattttcca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tattgctaaagatccaccatccagctgcagtgctggtccagatacagatgatattttcca 180


Query: 181 ttggacagctactattatgggtccaaaagactcaccatacgaaggaggtgttttcttttt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ttggacagctactattatgggtccaaaagactcaccatacgaaggaggtgttttcttttt 240


Query: 241 aaatattaatttcccaacagattatccatttaaaccaccaaagattagttttgttaccaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 aaatattaatttcccaacagattatccatttaaaccaccaaagattagttttgttaccaa 300


Query: 301 agtttaccatccaaatattaatgccagcggaagtatttgtttagatattttaaaggaaca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 agtttaccatccaaatattaatgccagcggaagtatttgtttagatattttaaaggaaca 360


Query: 361 atggagtccagccttaactattccaaaagttttactttcaattagtgcccttttatctga 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 atggagtccagccttaactattccaaaagttttactttcaattagtgcccttttatctga 420


Query: 421 cccaaatccagatgatcctcttgtaccagatattgccaatttatttaaaacagacaaaaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 cccaaatccagatgatcctcttgtaccagatattgccaatttatttaaaacagacaaaaa 480


Query: 481 tagattcgaatctaatgcccgtgagtggacaagaaaatatgcacaataatttttcacgaa 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 tagattcgaatctaatgcccgtgagtggacaagaaaatatgcacaataatttttcacgaa 540


Query: 541 tagataaggcaaccc 555
|||||||||||||||
Sbjct: 541 tagataaggcaaccc 555

Score = 54.0 bits (27), Expect(2) = 0.0
Identities = 27/27 (100%)
Strand = Plus / Plus


Query: 575 ggtgaacgactaaacttttaaaataaa 601
|||||||||||||||||||||||||||
Sbjct: 575 ggtgaacgactaaacttttaaaataaa 601

Lambda K H
1.37 0.711 1.31

Matrix: blastn matrix:1 -3
Number of Sequences: 92845959
Number of Hits to DB: 888,034,481
Number of extensions: 57619407
Number of successful extensions: 5195665
Number of sequences better than 10.0: 7473
Length of query: 647
Length of database: 95,242,211,685
Length adjustment: 23
Effective length of query: 624
Effective length of database: 93,106,754,628
Effective search space: 58098614887872
Effective search space used: 58098614887872
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)

protein update 2009. 7.10
Homology vs Protein
Query= Contig-U14130-1 (Contig-U14130-1Q) /CSM_Contig/Contig-U14130-1Q.Seq.d
(647 letters)

Database: nrp_B
3,236,559 sequences; 1,051,180,864 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value

(P46595) RecName: Full=Ubiquitin-conjugating enzyme E2 4; ... 253 3e-66
AP007167_66(AP007167|pid:none) Aspergillus oryzae RIB40 genomic ... 251 1e-65
AM920435_793(AM920435|pid:none) Penicillium chrysogenum Wisconsi... 251 1e-65
AE017346_284(AE017346|pid:none) Cryptococcus neoformans var. neo... 249 5e-65
CR382130_616(CR382130|pid:none) Yarrowia lipolytica strain CLIB1... 247 2e-64
(O74196) RecName: Full=Ubiquitin-conjugating enzyme E2-16 kDa; ... 246 3e-64
AK095822_1(AK095822|pid:none) Homo sapiens cDNA FLJ38503 fis, cl... 246 3e-64
EU244369_1(EU244369|pid:none) Haliotis diversicolor clone HDr4CJ... 246 4e-64
(P61077) RecName: Full=Ubiquitin-conjugating enzyme E2 D3; ... 246 5e-64
(P25867) RecName: Full=Ubiquitin-conjugating enzyme E2-17 kDa; ... 245 7e-64
BT077825_1(BT077825|pid:none) Lepeophtheirus salmonis Pacific fo... 245 9e-64
BC066917_1(BC066917|pid:none) Homo sapiens ubiquitin-conjugating... 245 9e-64
AK152231_1(AK152231|pid:none) Mus musculus bone marrow macrophag... 244 1e-63
CR382125_546(CR382125|pid:none) Kluyveromyces lactis strain NRRL... 244 2e-63
BC076728_1(BC076728|pid:none) Xenopus laevis ubiquitin-conjugati... 243 4e-63
AK009276_1(AK009276|pid:none) Mus musculus adult male tongue cDN... 243 4e-63
(Q3ZCF7) RecName: Full=Ubiquitin-conjugating enzyme E2 D3; ... 243 4e-63
(Q06AA9) RecName: Full=Ubiquitin-conjugating enzyme E2 D2; ... 243 5e-63
BT057415_1(BT057415|pid:none) Salmo salar clone ssal-eve-568-290... 243 5e-63
(P51668) RecName: Full=Ubiquitin-conjugating enzyme E2 D1; ... 242 6e-63
BC055599_1(BC055599|pid:none) Danio rerio zgc:66323, mRNA (cDNA ... 242 6e-63
BT079155_1(BT079155|pid:none) Esox lucius clone eluc-evq-525-194... 242 6e-63
AX406018_1(AX406018|pid:none) Sequence 433 from Patent WO0222660. 242 6e-63
AF325019_1(AF325019|pid:none) Arabidopsis thaliana AT4g27960 (AT... 242 8e-63
BT057031_1(BT057031|pid:none) Salmo salar clone ssal-evd-502-245... 242 8e-63
AK059627_1(AK059627|pid:none) Oryza sativa Japonica Group cDNA c... 242 8e-63
I59365(I59365) ubiquitin conjugating enzyme - human &L40146_1(L... 242 8e-63
CR380951_194(CR380951|pid:none) Candida glabrata strain CBS138 c... 242 8e-63
DQ027023_1(DQ027023|pid:none) Arabidopsis thaliana ubiquitinatin... 242 8e-63
(P35132) RecName: Full=SUMO-conjugating enzyme UBC9; EC... 242 8e-63
AF161722_1(AF161722|pid:none) Magnaporthe grisea ubiquitin-conju... 241 1e-62
EU972165_1(EU972165|pid:none) Zea mays clone 376667 ubiquitin-co... 241 1e-62
BC059548_1(BC059548|pid:none) Danio rerio ubiquitin-conjugating ... 241 1e-62
EU593895_1(EU593895|pid:none) Brassica napus E2 ubiquitin-conjug... 241 1e-62
AM181595_1(AM181595|pid:none) Oesophagostomum dentatum mRNA for ... 241 1e-62
BC048896_1(BC048896|pid:none) Danio rerio zgc:55886, mRNA (cDNA ... 241 1e-62
(P35129) RecName: Full=Ubiquitin-conjugating enzyme E2 2; ... 241 1e-62
BC047863_1(BC047863|pid:none) Danio rerio zgc:56340, mRNA (cDNA ... 241 1e-62
AM427228_1(AM427228|pid:none) Vitis vinifera contig VV78X183533.... 241 2e-62
EU586201_1(EU586201|pid:none) Malus x domestica cultivar Fuji ub... 241 2e-62
AF034946_1(AF034946|pid:none) Zea mays ubiquitin conjugating enz... 241 2e-62
FN392321_727(FN392321|pid:none) Pichia pastoris GS115 chromosome... 240 2e-62
BT070291_1(BT070291|pid:none) Picea sitchensis clone WS02718_B23... 240 2e-62
BT056835_1(BT056835|pid:none) Salmo salar clone ssal-plnb-027-15... 240 2e-62
(P35134) RecName: Full=Ubiquitin-conjugating enzyme E2 11; ... 240 2e-62
(P35133) RecName: Full=Ubiquitin-conjugating enzyme E2 10; ... 240 2e-62
(P15731) RecName: Full=Ubiquitin-conjugating enzyme E2 4; ... 240 3e-62
BT082300_1(BT082300|pid:none) Anoplopoma fimbria clone afim-evh-... 240 3e-62
BC155782_1(BC155782|pid:none) Danio rerio zgc:56340, mRNA (cDNA ... 240 3e-62
(P43102) RecName: Full=Ubiquitin-conjugating enzyme E2 4; ... 239 4e-62
AP003446_10(AP003446|pid:none) Oryza sativa Japonica Group genom... 239 4e-62
FM992695_868(FM992695|pid:none) Candida dubliniensis CD36 chromo... 239 4e-62
AM181594_1(AM181594|pid:none) Oesophagostomum dentatum mRNA for ... 239 4e-62
BT034735_1(BT034735|pid:none) Zea mays full-length cDNA clone ZM... 239 4e-62
EF146072_1(EF146072|pid:none) Populus trichocarpa clone WS0115_F... 239 5e-62
BT046784_1(BT046784|pid:none) Salmo salar clone ssal-eve-547-308... 239 5e-62
AC148404_22(AC148404|pid:none) Medicago truncatula clone mth2-28... 239 5e-62
GM966533_1(GM966533|pid:none) Sequence 1865 from Patent WO200814... 239 7e-62
EU957802_1(EU957802|pid:none) Zea mays clone 1623065 ubiquitin-c... 239 7e-62
GM966539_1(GM966539|pid:none) Sequence 1871 from Patent WO200814... 239 7e-62
(P15732) RecName: Full=Ubiquitin-conjugating enzyme E2-16 kDa; ... 239 7e-62
AY489135_1(AY489135|pid:none) Capsicum annuum ubiquitin-conjugat... 238 1e-61
BT075389_1(BT075389|pid:none) Osmerus mordax clone omor-eva-513-... 238 1e-61
BT070302_1(BT070302|pid:none) Picea sitchensis clone WS02719_E19... 238 1e-61
(Q94F47) RecName: Full=Ubiquitin carrier protein E2 28; ... 238 1e-61
AY736121_1(AY736121|pid:none) Triticum aestivum ubiquitin-conjug... 238 1e-61
BT053431_1(BT053431|pid:none) Medicago truncatula clone MTYFP_FQ... 237 2e-61
EF147515_1(EF147515|pid:none) Populus trichocarpa clone WS0123_B... 237 2e-61
EU853458_1(EU853458|pid:none) Cucumis melo var. cantalupensis ub... 237 2e-61
BT034602_1(BT034602|pid:none) Zea mays full-length cDNA clone ZM... 237 2e-61
EU960465_1(EU960465|pid:none) Zea mays clone 225114 ubiquitin-co... 236 3e-61
DQ207855_1(DQ207855|pid:none) Solanum tuberosum clone 078A09 ubi... 236 3e-61
EF145004_1(EF145004|pid:none) Populus trichocarpa clone WS0111_H... 236 3e-61
AF424641_1(AF424641|pid:none) Phytophthora infestans clone MY-03... 236 3e-61
BT040054_1(BT040054|pid:none) Zea mays full-length cDNA clone ZM... 236 3e-61
AY813067_1(AY813067|pid:none) Schistosoma japonicum SJCHGC00720 ... 236 3e-61
(P35135) RecName: Full=Ubiquitin-conjugating enzyme E2-17 kDa; ... 236 3e-61
CP000881_158(CP000881|pid:none) Hemiselmis andersenii chromosome... 236 4e-61
AP008208_133(AP008208|pid:none) Oryza sativa (japonica cultivar-... 236 4e-61
AM464235_1(AM464235|pid:none) Vitis vinifera contig VV78X153506.... 236 4e-61
AY082009_1(AY082009|pid:none) Gossypium thurberi ubiquitin-conju... 236 4e-61
EF144962_1(EF144962|pid:none) Populus trichocarpa clone WS0111_C... 236 4e-61
DQ222513_1(DQ222513|pid:none) Solanum tuberosum clone 117E03 ubi... 236 4e-61
BC142569_1(BC142569|pid:none) Xenopus laevis ubiquitin conjugati... 236 6e-61
EU976228_1(EU976228|pid:none) Zea mays clone 688590 ubiquitin-co... 236 6e-61
EU586200_1(EU586200|pid:none) Malus x domestica cultivar Fuji ub... 236 6e-61
AY220735_1(AY220735|pid:none) Hordeum vulgare ubiquitin-conjugat... 235 7e-61
AB074411_1(AB074411|pid:none) Oryza sativa Japonica Group mRNA f... 235 7e-61
EF085158_1(EF085158|pid:none) Picea sitchensis clone WS0285_M23 ... 235 7e-61
(P35131) RecName: Full=Ubiquitin-conjugating enzyme E2 8; ... 235 1e-60
AB074412_1(AB074412|pid:none) Oryza sativa Japonica Group mRNA f... 235 1e-60
BT070503_1(BT070503|pid:none) Picea sitchensis clone WS02732_O01... 234 2e-60
(Q9FKT3) RecName: Full=Ubiquitin carrier protein E2 30; ... 234 2e-60
CR940352_416(CR940352|pid:none) Theileria annulata strain Ankara... 234 2e-60
AF001948_1(AF001948|pid:none) Pinus resinosa putative ubiquitin ... 234 2e-60
(Q9NTT1) Putative ubiquitin-conjugating enzyme E2 D3-like protei... 233 5e-60
GM966541_1(GM966541|pid:none) Sequence 1873 from Patent WO200814... 233 5e-60
AY082004_1(AY082004|pid:none) Gossypium hirsutum ubiquitin-conju... 232 6e-60
AY082005_1(AY082005|pid:none) Gossypium hirsutum ubiquitin-conju... 232 6e-60
DQ228113_4(DQ228113|pid:none) Hanusia phi strain CCMP325 18S rib... 232 6e-60
DQ228115_1(DQ228115|pid:none) Proteomonas sulcata strain CCMP704... 231 1e-59
(Q9SLE4) RecName: Full=Ubiquitin carrier protein E2 29; ... 231 2e-59
BT061792_1(BT061792|pid:none) Zea mays full-length cDNA clone ZM... 229 7e-59
AC007764_2(AC007764|pid:none) Genomic sequence for Arabidopsis t... 228 2e-58
AJ843120_1(AJ843120|pid:none) Plantago major mRNA for Ubiquitin-... 227 3e-58
AM494971_122(AM494971|pid:none) Leishmania braziliensis chromoso... 226 3e-58
AC159432_15(AC159432|pid:none) Trypanosoma brucei chromosome 5 c... 226 4e-58
AF461687_1(AF461687|pid:none) Pinus pinaster putative ubiquitin ... 225 8e-58
EU963040_1(EU963040|pid:none) Zea mays clone 256705 ubiquitin-co... 223 3e-57
BC109525_1(BC109525|pid:none) Bos taurus ubiquitin-conjugating e... 223 4e-57
GM966535_1(GM966535|pid:none) Sequence 1867 from Patent WO200814... 223 5e-57
DQ144988_1(DQ144988|pid:none) Symbiodinium sp. C3 ubiquitin conj... 221 2e-56
AL672098_4(AL672098|pid:none) Mouse DNA sequence from clone RP23... 219 4e-56
(Q9C9Y7) RecName: Full=Probable ubiquitin-conjugating enzyme E2 ... 219 5e-56
S61417(S61417;S61418;S72311)ubiquitin-protein ligase (EC 6.3.2.1... 216 6e-55
AY083611_1(AY083611|pid:none) Oryza sativa elicitor and UV light... 215 8e-55
BT078441_1(BT078441|pid:none) Lepeophtheirus salmonis Pacific fo... 214 2e-54
BC048523_1(BC048523|pid:none) Mus musculus predicted gene, EG237... 213 5e-54
U15971_1(U15971|pid:none) Oryza sativa ubiquitin conjugating enz... 212 7e-54
BT046386_1(BT046386|pid:none) Salmo salar clone ssal-eve-564-281... 209 6e-53
CP001326_415(CP001326|pid:none) Micromonas sp. RCC299 chromosome... 202 7e-51
EU170471_1(EU170471|pid:none) Eucommia ulmoides ubiquitin conjug... 201 2e-50
L00641_1(L00641|pid:none) Arabidopsis thaliana ubiquitin conjuga... 200 3e-50
EF576159_1(EF576159|pid:none) Oryza sativa (indica cultivar-grou... 199 4e-50
AY389716_1(AY389716|pid:none) Hyacinthus orientalis ubiquitin-co... 197 3e-49
BT071650_1(BT071650|pid:none) Picea sitchensis clone WS0294_N24 ... 196 5e-49
T14451(T14451) ubiquitin conjugating enzyme, E2 - wild cabbage (... 194 1e-48
AY231898_1(AY231898|pid:none) Drosophila yakuba clone yak-em_eff... 194 2e-48
DQ887084_1(DQ887084|pid:none) Arachis hypogaea ubiquitin-conjuga... 194 2e-48
AB105548_1(AB105548|pid:none) Xenopus laevis Xubc15 mRNA for ubi... 192 7e-48
AB172309_1(AB172309|pid:none) Macaca fascicularis brain cDNA clo... 191 2e-47
AY891186_1(AY891186|pid:none) Synthetic construct Homo sapiens c... 191 2e-47
BT045559_1(BT045559|pid:none) Salmo salar clone ssal-rgf-524-350... 191 2e-47
BT043519_1(BT043519|pid:none) Salmo salar clone HM4_1156 ubiquit... 191 2e-47
AY281323_1(AY281323|pid:none) Xenopus laevis ubiquitin-conjugati... 191 2e-47
BC042331_1(BC042331|pid:none) Danio rerio ubiquitin-conjugating ... 191 2e-47
(P52483) RecName: Full=Ubiquitin-conjugating enzyme E2 E3; ... 191 2e-47
DQ284472_1(DQ284472|pid:none) Solanum tuberosum clone 116D11 ubi... 190 3e-47
FJ168552_19(FJ168552|pid:none) Bodo saltans clone fosmid 45A12, ... 189 5e-47
BT057192_1(BT057192|pid:none) Salmo salar clone ssal-eve-549-287... 189 6e-47
BT057585_1(BT057585|pid:none) Salmo salar clone ssal-eve-534-384... 189 6e-47
(Q96LR5) RecName: Full=Ubiquitin-conjugating enzyme E2 E2; ... 189 8e-47
DQ972954_1(DQ972954|pid:none) Sus scrofa UB2E2 mRNA, complete cds. 189 8e-47
BC082838_1(BC082838|pid:none) Xenopus laevis hypothetical LOC494... 189 8e-47
BC077923_1(BC077923|pid:none) Xenopus laevis hypothetical LOC494... 189 8e-47
BC079134_1(BC079134|pid:none) Rattus norvegicus ubiquitin-conjug... 189 8e-47
BC099169_1(BC099169|pid:none) Rattus norvegicus ubiquitin-conjug... 189 8e-47
(Q91W82) RecName: Full=Ubiquitin-conjugating enzyme E2 E2; ... 189 8e-47
BC061394_1(BC061394|pid:none) Xenopus tropicalis ubiquitin-conju... 189 8e-47
BT079919_1(BT079919|pid:none) Esox lucius clone eluc-evq-517-214... 188 1e-46
BT074069_1(BT074069|pid:none) Oncorhynchus mykiss clone omyk-evo... 188 1e-46
BT056474_1(BT056474|pid:none) Salmo salar clone ssal-evd-521-050... 188 1e-46
BT074238_1(BT074238|pid:none) Oncorhynchus mykiss clone omyk-evo... 187 2e-46
DQ480743_1(DQ480743|pid:none) Rattus norvegicus clone ZX34 unkno... 187 3e-46
BT045620_1(BT045620|pid:none) Salmo salar clone ssal-rgf-526-297... 186 4e-46
EF585788_1(EF585788|pid:none) Sonneratia alba isolate Sonn199_1 ... 186 4e-46
BT075359_1(BT075359|pid:none) Osmerus mordax clone omor-eva-519-... 186 4e-46
BT074151_1(BT074151|pid:none) Oncorhynchus mykiss clone omyk-evo... 186 4e-46
EF585789_1(EF585789|pid:none) Sonneratia caseolaris isolate Sonn... 186 5e-46
AB099076_1(AB099076|pid:none) Bos taurus mRNA for similar to pho... 186 7e-46
DQ848992_1(DQ848992|pid:none) Trachemys scripta ubiquitin-conjug... 185 9e-46
BT074944_1(BT074944|pid:none) Osmerus mordax clone omor-rgc-511-... 184 1e-45
CR954205_509(CR954205|pid:none) Ostreococcus tauri strain OTTH05... 184 2e-45
FN357511_11(FN357511|pid:none) Schistosoma mansoni genome sequen... 183 4e-45
(P52485) RecName: Full=Ubiquitin-conjugating enzyme E2-24 kDa; ... 183 4e-45
U66493_1(U66493|pid:none) Metarhizium anisopliae ubiquitin conju... 182 6e-45
AY814691_1(AY814691|pid:none) Schistosoma japonicum SJCHGC02747 ... 182 6e-45
FN357441_2(FN357441|pid:none) Schistosoma mansoni genome sequenc... 182 6e-45
AY148222_1(AY148222|pid:none) Sus scrofa E2 ubiquitin-conjugatin... 182 6e-45
AY811864_1(AY811864|pid:none) Schistosoma japonicum SJCHGC02746 ... 182 6e-45
AY826156_1(AY826156|pid:none) Aedes albopictus clone AL_265 ubiq... 179 5e-44
AF026506_1(AF026506|pid:none) Drosophila silvestris ubiquitin-co... 179 6e-44
FN357511_14(FN357511|pid:none) Schistosoma mansoni genome sequen... 179 8e-44
AF136176_1(AF136176|pid:none) Homo sapiens ubiquitin-conjugating... 176 4e-43
AE017344_202(AE017344|pid:none) Cryptococcus neoformans var. neo... 176 7e-43
AP003804_13(AP003804|pid:none) Oryza sativa Japonica Group genom... 175 1e-42
(Q9LJD7) RecName: Full=Constitutive photomorphogenesis protein 1... 172 8e-42
AE014134_240(AE014134|pid:none) Drosophila melanogaster chromoso... 172 8e-42
AJ298327_1(AJ298327|pid:none) Platichthys flesus partial mRNA fo... 171 1e-41
AK316720_1(AK316720|pid:none) Arabidopsis thaliana AT5G41700 mRN... 171 2e-41
AY542993_1(AY542993|pid:none) Bigelowiella natans ubiquitin conj... 169 8e-41
(Q9C8X7) RecName: Full=Probable ubiquitin carrier protein E2 31;... 167 2e-40
U67838_1(U67838|pid:none) Dictyostelium discoideum putative ubiq... 165 9e-40
AY221464_1(AY221464|pid:none) Ovis aries UbcH5B mRNA, partial cds. 164 3e-39
AE014296_727(AE014296|pid:none) Drosophila melanogaster chromoso... 163 4e-39
AE017345_391(AE017345|pid:none) Cryptococcus neoformans var. neo... 162 8e-39
CR382129_20(CR382129|pid:none) Yarrowia lipolytica strain CLIB12... 162 1e-38
AM998844_1(AM998844|pid:none) Drosophila melanogaster CG2574 gen... 161 1e-38
AC150706_14(AC150706|pid:none) Medicago truncatula clone mth2-13... 160 2e-38
AE014298_1840(AE014298|pid:none) Drosophila melanogaster chromos... 160 4e-38
FM245972_1(FM245972|pid:none) Drosophila melanogaster CG2574 gen... 160 4e-38
AM998840_1(AM998840|pid:none) Drosophila melanogaster CG2574 gen... 160 4e-38
AK295354_1(AK295354|pid:none) Homo sapiens cDNA FLJ52264 complet... 159 5e-38
AY826157_1(AY826157|pid:none) Aedes albopictus clone AL_336 ubiq... 159 9e-38
DQ443216_1(DQ443216|pid:none) Bombyx mori ubiquitin conjugating ... 158 1e-37
BT076385_1(BT076385|pid:none) Caligus rogercresseyi clone crog-e... 158 1e-37
EF677016_1(EF677016|pid:none) Picea sitchensis clone WS02760_C17... 157 2e-37
BT081008_1(BT081008|pid:none) Caligus clemensi clone ccle-evs-50... 157 3e-37
AY291287_1(AY291287|pid:none) Bos taurus E2 ubiquitin conjugatin... 156 4e-37
AL139794_13(AL139794|pid:none) Leishmania major Friedlin chromos... 156 6e-37
EU284925_1(EU284925|pid:none) TSA: Elaeis guineensis EgEfMPOB001... 156 6e-37
BT071782_1(BT071782|pid:none) Picea sitchensis clone WS0454_N05 ... 155 1e-36
EF145757_1(EF145757|pid:none) Populus trichocarpa clone WS0113_D... 155 1e-36
EF145085_1(EF145085|pid:none) Populus trichocarpa clone WS01120_... 155 1e-36
CU633899_608(CU633899|pid:none) Podospora anserina genomic DNA c... 155 1e-36
AP007166_113(AP007166|pid:none) Aspergillus oryzae RIB40 genomic... 154 2e-36
EF082769_1(EF082769|pid:none) Picea sitchensis clone WS0277_E18 ... 154 2e-36
EF095146_1(EF095146|pid:none) Homarus americanus ubiquitin-conju... 154 3e-36
AK005788_1(AK005788|pid:none) Mus musculus adult male testis cDN... 154 3e-36
GM966557_1(GM966557|pid:none) Sequence 1889 from Patent WO200814... 154 3e-36
FN392322_448(FN392322|pid:none) Pichia pastoris GS115 chromosome... 154 3e-36
AM270282_9(AM270282|pid:none) Aspergillus niger contig An12c0260... 153 4e-36
AM920437_2378(AM920437|pid:none) Penicillium chrysogenum Wiscons... 153 4e-36
AM494941_87(AM494941|pid:none) Leishmania braziliensis chromosom... 153 5e-36
(Q4R4I1) RecName: Full=Ubiquitin-conjugating enzyme E2 N; ... 153 5e-36
CU928174_488(CU928174|pid:none) Zygosaccharomyces rouxii strain ... 153 5e-36
(Q86K32) RecName: Full=Probable ubiquitin-conjugating enzyme E2 ... 152 6e-36
CR940347_494(CR940347|pid:none) Theileria annulata strain Ankara... 152 8e-36
BT038939_1(BT038939|pid:none) Zea mays full-length cDNA clone ZM... 152 1e-35
AE014134_2590(AE014134|pid:none) Drosophila melanogaster chromos... 152 1e-35
AL844509_547(AL844509|pid:none) Plasmodium falciparum 3D7 chromo... 152 1e-35
AK122067_1(AK122067|pid:none) Oryza sativa Japonica Group cDNA c... 152 1e-35
EU952491_1(EU952491|pid:none) Zea mays clone 1282033 ubiquitin-c... 151 1e-35
AE016820_490(AE016820|pid:none) Ashbya gossypii (= Eremothecium ... 151 2e-35
(P52490) RecName: Full=Ubiquitin-conjugating enzyme E2 13; ... 151 2e-35
CR380953_344(CR380953|pid:none) Candida glabrata strain CBS138 c... 151 2e-35
(P61088) RecName: Full=Ubiquitin-conjugating enzyme E2 N; ... 150 2e-35
FM992692_56(FM992692|pid:none) Candida dubliniensis CD36 chromos... 150 3e-35
BC044461_1(BC044461|pid:none) Danio rerio ubiquitin-conjugating ... 150 3e-35
AL590449_93(AL590449|pid:none) chromosome X of strain GB-M1 of E... 150 4e-35
BT030506_1(BT030506|pid:none) Bos taurus ubiquitin-conjugating e... 150 4e-35
CR940347_711(CR940347|pid:none) Theileria annulata strain Ankara... 150 4e-35
EU975078_1(EU975078|pid:none) Zea mays clone 466704 unknown mRNA. 149 5e-35
DQ217367_1(DQ217367|pid:none) Taeniopygia guttata clone 0058P004... 149 5e-35
CU928171_602(CU928171|pid:none) Kluyveromyces thermotolerans str... 149 5e-35
(Q9EQX9) RecName: Full=Ubiquitin-conjugating enzyme E2 N; ... 149 7e-35
BC053797_1(BC053797|pid:none) Xenopus laevis ubiquitin-conjugati... 149 7e-35
CR382123_762(CR382123|pid:none) Kluyveromyces lactis strain NRRL... 149 9e-35
BC053141_1(BC053141|pid:none) Danio rerio ubiquitin-conjugating ... 149 9e-35
BC064184_1(BC064184|pid:none) Xenopus tropicalis ubiquitin-conju... 149 9e-35
AE017343_517(AE017343|pid:none) Cryptococcus neoformans var. neo... 148 1e-34
BT078288_1(BT078288|pid:none) Lepeophtheirus salmonis Pacific fo... 142 2e-34
AY135219_1(AY135219|pid:none) Pavlova lutheri ubiquitin-conjugat... 147 2e-34
GM966545_1(GM966545|pid:none) Sequence 1877 from Patent WO200814... 146 4e-34
GM966112_1(GM966112|pid:none) Sequence 1444 from Patent WO200814... 146 4e-34
BT075900_1(BT075900|pid:none) Caligus rogercresseyi clone crog-e... 146 6e-34
AM910993_147(AM910993|pid:none) Plasmodium knowlesi strain H chr... 146 6e-34
AK317108_1(AK317108|pid:none) Arabidopsis thaliana AT3G13550 mRN... 145 8e-34
AY048267_1(AY048267|pid:none) Arabidopsis thaliana AT5g62540/K19... 145 1e-33
EU966528_1(EU966528|pid:none) Zea mays clone 295025 ubiquitin-co... 145 1e-33
EF081861_1(EF081861|pid:none) Picea sitchensis clone WS0294_J10 ... 145 1e-33
GM966563_1(GM966563|pid:none) Sequence 1895 from Patent WO200814... 144 2e-33
(P42746) RecName: Full=Ubiquitin-conjugating enzyme E2 3; ... 144 3e-33
EF144666_1(EF144666|pid:none) Populus trichocarpa clone WS01116_... 144 3e-33
BT078448_1(BT078448|pid:none) Lepeophtheirus salmonis Pacific fo... 143 4e-33
(Q9NPD8) RecName: Full=Ubiquitin-conjugating enzyme E2 T; ... 143 5e-33
GM966106_1(GM966106|pid:none) Sequence 1438 from Patent WO200814... 143 5e-33
GM966553_1(GM966553|pid:none) Sequence 1885 from Patent WO200814... 142 6e-33
AY542992_1(AY542992|pid:none) Bigelowiella natans ubiquitin conj... 142 6e-33
CR548612_215(CR548612|pid:none) Paramecium tetraurelia macronucl... 142 6e-33
(O74810) RecName: Full=Ubiquitin-conjugating enzyme E2 1; ... 142 8e-33
(P21734) RecName: Full=Ubiquitin-conjugating enzyme E2-24 kDa; ... 141 1e-32
CP001323_325(CP001323|pid:none) Micromonas sp. RCC299 chromosome... 141 2e-32
CR382123_805(CR382123|pid:none) Kluyveromyces lactis strain NRRL... 141 2e-32
GM966102_1(GM966102|pid:none) Sequence 1434 from Patent WO200814... 141 2e-32
EU284823_1(EU284823|pid:none) TSA: Elaeis guineensis EgEfMPOB000... 140 2e-32
CP000585_249(CP000585|pid:none) Ostreococcus lucimarinus CCE9901... 140 2e-32
AK342573_1(AK342573|pid:none) Acyrthosiphon pisum ACYPI004996 mR... 140 2e-32
AK112003_1(AK112003|pid:none) Oryza sativa Japonica Group cDNA c... 140 2e-32
AF262934_1(AF262934|pid:none) Avicennia marina ubiquitin conjuga... 140 3e-32
(Q9UTN8) RecName: Full=Ubiquitin-conjugating enzyme E2 14; ... 140 3e-32
AC146747_17(AC146747|pid:none) Medicago truncatula clone mth2-14... 140 3e-32
AK070524_1(AK070524|pid:none) Oryza sativa Japonica Group cDNA c... 140 3e-32
AB079798_1(AB079798|pid:none) Oryza sativa Japonica Group OsRad6... 140 4e-32
BT063816_1(BT063816|pid:none) Zea mays full-length cDNA clone ZM... 140 4e-32
DQ294271_1(DQ294271|pid:none) Solanum tuberosum clone 147C03 ubi... 140 4e-32
BT036396_1(BT036396|pid:none) Zea mays full-length cDNA clone ZM... 139 5e-32
DQ200366_1(DQ200366|pid:none) Solanum tuberosum clone 055E08 ubi... 139 5e-32
EF144613_1(EF144613|pid:none) Populus trichocarpa clone WS01111_... 139 5e-32
GM966108_1(GM966108|pid:none) Sequence 1440 from Patent WO200814... 139 9e-32
EU964992_1(EU964992|pid:none) Zea mays clone 283008 ubiquitin-co... 139 9e-32
AJ843121_1(AJ843121|pid:none) Plantago major mRNA for Ubiquitin-... 138 1e-31
(Q9FI61) RecName: Full=Ubiquitin carrier protein E2 27; ... 138 1e-31
AF510491_1(AF510491|pid:none) Danio rerio ubiquitin conjugating ... 138 1e-31
AM920433_118(AM920433|pid:none) Penicillium chrysogenum Wisconsi... 138 1e-31
AB026055_1(AB026055|pid:none) Nicotiana tabacum Ntubc1 mRNA for ... 138 1e-31
AY814197_1(AY814197|pid:none) Schistosoma japonicum SJCHGC02302 ... 138 1e-31
FN313807_1(FN313807|pid:none) Schistosoma japonicum isolate Anhu... 138 1e-31
CR382137_65(CR382137|pid:none) Debaryomyces hansenii strain CBS7... 138 2e-31
NRL(1AAK) Ubiquitin conjugating enzyme (EC 6.3.2.19) - Arabidopsis 137 2e-31
(P25865) RecName: Full=Ubiquitin-conjugating enzyme E2 1; ... 137 2e-31
EU964354_1(EU964354|pid:none) Zea mays clone 278181 ubiquitin-co... 137 2e-31
(Q9CQ37) RecName: Full=Ubiquitin-conjugating enzyme E2 T; ... 137 3e-31
BT078532_1(BT078532|pid:none) Lepeophtheirus salmonis Pacific fo... 137 3e-31
CR954205_263(CR954205|pid:none) Ostreococcus tauri strain OTTH05... 137 4e-31
AM270022_37(AM270022|pid:none) Aspergillus niger contig An02c027... 137 4e-31
DQ284494_1(DQ284494|pid:none) Solanum tuberosum clone 063D04 ubi... 136 5e-31
DQ241834_1(DQ241834|pid:none) Solanum tuberosum clone 180C02 ubi... 136 5e-31
CU928175_153(CU928175|pid:none) Zygosaccharomyces rouxii strain ... 136 6e-31
BT034341_1(BT034341|pid:none) Zea mays full-length cDNA clone ZM... 135 8e-31
GM966098_1(GM966098|pid:none) Sequence 1430 from Patent WO200814... 135 1e-30
BT073899_1(BT073899|pid:none) Oncorhynchus mykiss clone omyk-evo... 134 2e-30
EU951840_1(EU951840|pid:none) Zea mays clone 1061423 unknown mRNA. 134 2e-30
CP000497_294(CP000497|pid:none) Pichia stipitis CBS 6054 chromos... 134 3e-30
AM111325_1(AM111325|pid:none) Plantago major partial mRNA for ub... 134 3e-30
FJ411013_1(FJ411013|pid:none) Paecilomyces sp. J18 ubiquitin con... 133 5e-30
AP003022_24(AP003022|pid:none) Oryza sativa Japonica Group genom... 133 5e-30
BC124718_1(BC124718|pid:none) Danio rerio zgc:153687, mRNA (cDNA... 133 5e-30
AB079872_1(AB079872|pid:none) Bombyx mori BmubcD4 gene for ubiqu... 132 7e-30
FN392321_948(FN392321|pid:none) Pichia pastoris GS115 chromosome... 132 7e-30
AC122726_25(AC122726|pid:none) Medicago truncatula clone mth2-23... 132 9e-30
D78372_1(D78372|pid:none) Neurospora crassa DNA for mus-8, compl... 132 9e-30
(P52478) RecName: Full=Ubiquitin-conjugating enzyme E2 1; ... 132 1e-29
CU638744_485(CU638744|pid:none) Podospora anserina genomic DNA c... 132 1e-29
CP001331_21(CP001331|pid:none) Micromonas sp. RCC299 chromosome ... 132 1e-29
BT082432_1(BT082432|pid:none) Anoplopoma fimbria clone afim-evh-... 131 1e-29
GM966114_1(GM966114|pid:none) Sequence 1446 from Patent WO200814... 131 1e-29
(P49459) RecName: Full=Ubiquitin-conjugating enzyme E2 A; ... 131 1e-29
BT074286_1(BT074286|pid:none) Oncorhynchus mykiss clone omyk-evo... 131 2e-29
AK341491_1(AK341491|pid:none) Acyrthosiphon pisum ACYPI008318 mR... 131 2e-29
(Q6BU36) RecName: Full=Ubiquitin-conjugating enzyme E2 2; ... 130 3e-29
(Q6FR76) RecName: Full=Ubiquitin-conjugating enzyme E2 2; ... 130 3e-29
BT077888_1(BT077888|pid:none) Lepeophtheirus salmonis Pacific fo... 130 3e-29
(Q58FS2) RecName: Full=Ubiquitin-conjugating enzyme E2 2; ... 130 4e-29
CU640366_482(CU640366|pid:none) Podospora anserina genomic DNA c... 130 4e-29
BC086816_1(BC086816|pid:none) Danio rerio ubiquitin-conjugating ... 130 4e-29
AK223064_1(AK223064|pid:none) Homo sapiens mRNA for ubiquitin-co... 130 4e-29
EF585864_1(EF585864|pid:none) Sonneratia alba isolate Sonn402_1 ... 130 4e-29
BT043711_1(BT043711|pid:none) Salmo salar clone HM5_2704 ubiquit... 130 4e-29
AE017344_267(AE017344|pid:none) Cryptococcus neoformans var. neo... 129 6e-29
AK166647_1(AK166647|pid:none) Mus musculus 1 cell embryo 1 cell ... 129 6e-29
AB011081_1(AB011081|pid:none) Mus musculus mRNA for huntingtin i... 129 6e-29
CU638744_764(CU638744|pid:none) Podospora anserina genomic DNA c... 129 6e-29
AJ720771_1(AJ720771|pid:none) Gallus gallus mRNA for hypothetica... 129 6e-29
D50499_1(D50499|pid:none) Paramecium tetraurelia mRNA for ubiqui... 129 6e-29
(Q4WLA7) RecName: Full=Ubiquitin-conjugating enzyme E2 2; ... 129 7e-29
AY891220_1(AY891220|pid:none) Synthetic construct Homo sapiens c... 129 7e-29
(P63146) RecName: Full=Ubiquitin-conjugating enzyme E2 B; ... 129 7e-29
BC074688_1(BC074688|pid:none) Xenopus tropicalis ubiquitin-conju... 129 1e-28
CU928175_205(CU928175|pid:none) Zygosaccharomyces rouxii strain ... 129 1e-28
FN392321_367(FN392321|pid:none) Pichia pastoris GS115 chromosome... 129 1e-28
AM270182_7(AM270182|pid:none) Aspergillus niger contig An08c0270... 129 1e-28
(Q5JXB2) RecName: Full=Putative ubiquitin-conjugating enzyme E2 ... 129 1e-28
(Q54XS6) RecName: Full=Probable ubiquitin-conjugating enzyme E2 ... 129 1e-28
(P52493) RecName: Full=Ubiquitin-conjugating enzyme E2 2; ... 129 1e-28
EF145179_1(EF145179|pid:none) Populus trichocarpa clone WS01121_... 128 1e-28
FN357392_23(FN357392|pid:none) Schistosoma mansoni genome sequen... 128 1e-28
BT048397_1(BT048397|pid:none) Salmo salar clone ssal-evd-501-143... 128 2e-28
FN317000_1(FN317000|pid:none) Schistosoma japonicum isolate Anhu... 128 2e-28
(Q96UP5) RecName: Full=Ubiquitin-conjugating enzyme E2 2; ... 128 2e-28
BT076412_1(BT076412|pid:none) Caligus rogercresseyi clone crog-e... 127 2e-28
D17786_1(D17786|pid:none) Oryza sativa KN69 mRNA for ubiquitin-c... 127 2e-28
DQ219874_1(DQ219874|pid:none) Bombyx mori ubiquitin-conjugating ... 127 2e-28
EF585865_1(EF585865|pid:none) Sonneratia caseolaris isolate Sonn... 127 2e-28
BT079170_1(BT079170|pid:none) Esox lucius clone eluc-evq-509-269... 127 2e-28
CU640366_966(CU640366|pid:none) Podospora anserina genomic DNA c... 127 3e-28
CR940352_300(CR940352|pid:none) Theileria annulata strain Ankara... 127 4e-28
CP000500_524(CP000500|pid:none) Pichia stipitis CBS 6054 chromos... 127 4e-28
AF419316_1(AF419316|pid:none) Bos taurus RAD6-like protein HR6A ... 127 4e-28
(Q4PFA5) RecName: Full=Ubiquitin-conjugating enzyme E2 2; ... 126 5e-28
AC003974_7(AC003974|pid:none) Arabidopsis thaliana chromosome 2 ... 126 5e-28
(Q6C093) RecName: Full=Ubiquitin-conjugating enzyme E2 2; ... 126 5e-28
EF146216_1(EF146216|pid:none) Populus trichocarpa clone WS0116_E... 126 6e-28
AE013599_2725(AE013599|pid:none) Drosophila melanogaster chromos... 126 6e-28
BC077940_1(BC077940|pid:none) Xenopus laevis hypothetical protei... 126 6e-28
AY389584_1(AY389584|pid:none) Hyacinthus orientalis ubiquitin-co... 126 6e-28
T18512(T18512)hypothetical protein C0855w - malaria parasite (Pl... 126 6e-28
CR761899_1(CR761899|pid:none) Xenopus tropicalis finished cDNA, ... 125 8e-28
CR954214_340(CR954214|pid:none) Ostreococcus tauri strain OTTH05... 125 1e-27
DQ321735_1(DQ321735|pid:none) Schistosoma mansoni RAD6 mRNA, com... 125 1e-27
(P52486) RecName: Full=Ubiquitin-conjugating enzyme E2-22 kDa; ... 125 1e-27
FN357687_9(FN357687|pid:none) Schistosoma mansoni genome sequenc... 125 1e-27
BT073663_1(BT073663|pid:none) Oncorhynchus mykiss clone omyk-evn... 125 1e-27
BC091621_1(BC091621|pid:none) Xenopus tropicalis ubiquitin-conju... 125 1e-27
T40123(T40123)ubiquitin-conjugating enzyme - fission yeast (Sch... 125 1e-27
BC071403_1(BC071403|pid:none) Danio rerio ubiquitin-conjugating ... 125 1e-27
AL844502_188(AL844502|pid:none) Plasmodium falciparum 3D7 chromo... 125 1e-27
AF132074_1(AF132074|pid:none) Equus caballus RAD6 homolog (EHR6A... 125 1e-27
AF132075_1(AF132075|pid:none) Bos taurus RAD6 homolog (BHR6A) ge... 125 1e-27
EU975744_1(EU975744|pid:none) Zea mays clone 499094 ubiquitin-co... 125 1e-27
(Q5R5I4) RecName: Full=Ubiquitin-conjugating enzyme E2 L3; ... 125 1e-27
AB020746_7(AB020746|pid:none) Arabidopsis thaliana genomic DNA, ... 125 1e-27
AY223038_1(AY223038|pid:none) Schistosoma japonicum SJCHGC01675 ... 125 1e-27
AK167847_1(AK167847|pid:none) Mus musculus CRL-1722 L5178Y-R cDN... 125 1e-27
BT025380_1(BT025380|pid:none) Bos taurus ubiquitin-conjugating e... 125 1e-27
AY086775_1(AY086775|pid:none) Arabidopsis thaliana clone 27602 m... 124 2e-27
CU928180_286(CU928180|pid:none) Kluyveromyces thermotolerans str... 124 2e-27
BT078888_1(BT078888|pid:none) Esox lucius clone eluc-evq-513-210... 124 2e-27
AK163966_1(AK163966|pid:none) Mus musculus ES cells cDNA, RIKEN ... 124 2e-27
AY223405_1(AY223405|pid:none) Schistosoma japonicum clone ZZZ337... 124 2e-27
FN357511_12(FN357511|pid:none) Schistosoma mansoni genome sequen... 124 2e-27
CR382131_195(CR382131|pid:none) Yarrowia lipolytica strain CLIB1... 124 2e-27
FN317049_1(FN317049|pid:none) Schistosoma japonicum isolate Anhu... 124 2e-27
FN373925_1(FN373925|pid:none) Schistosoma mansoni genome sequenc... 124 3e-27
BX957246_4(BX957246|pid:none) Zebrafish DNA sequence from clone ... 124 3e-27
AC159413_39(AC159413|pid:none) Trypanosoma brucei chromosome 7 c... 124 3e-27
T08465(T08465) ubiquitin-protein ligase (EC 6.3.2.19) - fruit fl... 124 3e-27
BT072278_1(BT072278|pid:none) Salmo salar clone ssal-rgf-519-255... 124 3e-27
CU633438_434(CU633438|pid:none) Podospora anserina genomic DNA c... 123 4e-27
AP007155_381(AP007155|pid:none) Aspergillus oryzae RIB40 genomic... 123 5e-27
EU956203_1(EU956203|pid:none) Zea mays clone 1558972 hypothetica... 123 5e-27
BT048926_1(BT048926|pid:none) Salmo salar clone ssal-evd-504-092... 123 5e-27
AY632078_1(AY632078|pid:none) Clonorchis sinensis ubiquitin-conj... 122 7e-27
CR382128_835(CR382128|pid:none) Yarrowia lipolytica strain CLIB1... 122 7e-27
AF132073_1(AF132073|pid:none) Sus scrofa RAD6 homolog (PHR6A) ge... 122 7e-27
EU586199_1(EU586199|pid:none) Malus x domestica cultivar Fuji ub... 122 9e-27
AK301675_1(AK301675|pid:none) Homo sapiens cDNA FLJ51703 complet... 122 9e-27
AK291083_1(AK291083|pid:none) Homo sapiens cDNA FLJ77917 complet... 122 9e-27
AY814405_1(AY814405|pid:none) Schistosoma japonicum SJCHGC06418 ... 122 9e-27
BC056724_1(BC056724|pid:none) Danio rerio ubiquitin-conjugating ... 122 9e-27
BT069771_1(BT069771|pid:none) Zea mays full-length cDNA clone ZM... 122 9e-27
BT079955_1(BT079955|pid:none) Esox lucius clone eluc-evq-507-212... 122 9e-27
CR380959_331(CR380959|pid:none) Candida glabrata strain CBS138 c... 122 1e-26
(Q8LGF7) RecName: Full=Probable ubiquitin carrier protein E2 21;... 122 1e-26
EF146699_1(EF146699|pid:none) Populus trichocarpa clone WS01212_... 122 1e-26
EF585866_1(EF585866|pid:none) Sonneratia ovata isolate Sonn402_3... 122 1e-26
AK059694_1(AK059694|pid:none) Oryza sativa Japonica Group cDNA c... 122 1e-26
AK340875_1(AK340875|pid:none) Acyrthosiphon pisum ACYPI005089 mR... 122 1e-26
BT063453_1(BT063453|pid:none) Zea mays full-length cDNA clone ZM... 121 2e-26
BT081488_1(BT081488|pid:none) Rana catesbeiana clone rcat-evr-52... 121 2e-26
BT034037_1(BT034037|pid:none) Zea mays full-length cDNA clone ZM... 121 2e-26
AK299985_1(AK299985|pid:none) Homo sapiens cDNA FLJ59750 complet... 121 2e-26
DQ923722_1(DQ923722|pid:none) Litopenaeus vannamei ubiquitin-con... 121 2e-26
BT081065_1(BT081065|pid:none) Caligus clemensi clone ccle-evs-51... 121 2e-26
AK343178_1(AK343178|pid:none) Acyrthosiphon pisum ACYPI006341 mR... 120 3e-26
CP000497_479(CP000497|pid:none) Pichia stipitis CBS 6054 chromos... 120 3e-26
(Q8L7T3) RecName: Full=Ubiquitin carrier protein E2 20; ... 120 3e-26
AC159407_39(AC159407|pid:none) Trypanosoma brucei chromosome 8 c... 120 3e-26
AL513444_21(AL513444|pid:none) Neurospora crassa DNA linkage gro... 120 3e-26
(Q86IZ3) RecName: Full=Ubiquitin-conjugating enzyme E2 pex4; ... 120 3e-26
AM920437_1408(AM920437|pid:none) Penicillium chrysogenum Wiscons... 120 4e-26
BT003599_1(BT003599|pid:none) Drosophila melanogaster GM10337 fu... 120 4e-26
CP000584_457(CP000584|pid:none) Ostreococcus lucimarinus CCE9901... 119 6e-26
(Q553F3) RecName: Full=Ubiquitin-conjugating enzyme E2 2; ... 119 6e-26
(P52492) RecName: Full=Ubiquitin-conjugating enzyme E2-18 kDa; ... 119 6e-26
EU595015_1(EU595015|pid:none) Myxobolus cerebralis clone 1J3 ubi... 119 8e-26
CU928181_242(CU928181|pid:none) Zygosaccharomyces rouxii strain ... 119 1e-25
AK341528_1(AK341528|pid:none) Acyrthosiphon pisum ACYPI000705 mR... 118 1e-25
AY892102_1(AY892102|pid:none) Synthetic construct Homo sapiens c... 118 1e-25
BC047985_1(BC047985|pid:none) Xenopus laevis ubiquitin-conjugati... 118 1e-25
AK341282_1(AK341282|pid:none) Acyrthosiphon pisum ACYPI000069 mR... 118 1e-25
(P62253) RecName: Full=Ubiquitin-conjugating enzyme E2 G1; ... 118 1e-25
BX957246_5(BX957246|pid:none) Zebrafish DNA sequence from clone ... 118 2e-25
(O00103) RecName: Full=Ubiquitin-conjugating enzyme E2-20 kDa; ... 118 2e-25
BX957246_6(BX957246|pid:none) Zebrafish DNA sequence from clone ... 118 2e-25
CU640366_1044(CU640366|pid:none) Podospora anserina genomic DNA ... 118 2e-25
BT078648_1(BT078648|pid:none) Lepeophtheirus salmonis Pacific fo... 118 2e-25
DQ311426_1(DQ311426|pid:none) Bombyx mori ubiquitin conjugating ... 117 2e-25
(Q4R5Y8) RecName: Full=Ubiquitin-conjugating enzyme E2 G1; ... 117 2e-25
(Q9LJZ5) RecName: Full=Ubiquitin carrier protein E2 19; ... 117 2e-25
AJ277746_1(AJ277746|pid:none) Drosophila melanogaster mRNA for u... 117 2e-25
FM992695_813(FM992695|pid:none) Candida dubliniensis CD36 chromo... 117 4e-25
AX887984_1(AX887984|pid:none) Sequence 3847 from Patent EP1033401. 117 4e-25
AB113652_1(AB113652|pid:none) Coprinopsis cinerea ubc9 mRNA for ... 117 4e-25
CU928176_185(CU928176|pid:none) Zygosaccharomyces rouxii strain ... 117 4e-25
BC076753_1(BC076753|pid:none) Xenopus laevis MGC82328 protein, m... 117 4e-25
AL844518_5(AL844518|pid:none) Zebrafish DNA sequence from clone ... 116 5e-25
FN357616_24(FN357616|pid:none) Schistosoma mansoni genome sequen... 116 5e-25
EF066642_1(EF066642|pid:none) Trichinella spiralis clone T3125 u... 116 5e-25
U00035_7(U00035|pid:none) Caenorhabditis elegans cosmid R01H2, c... 116 5e-25
BT083349_1(BT083349|pid:none) Anoplopoma fimbria clone afim-evh-... 116 5e-25
AL110500_18(AL110500|pid:none) Caenorhabditis elegans YAC Y87G2A... 116 5e-25
DQ311425_1(DQ311425|pid:none) Bombyx mori ubiquitin conjugating ... 116 5e-25
BC045512_1(BC045512|pid:none) Danio rerio ubiquitin-conjugating ... 116 5e-25
AK343174_1(AK343174|pid:none) Acyrthosiphon pisum ACYPI001299 mR... 116 5e-25
AC159405_40(AC159405|pid:none) Trypanosoma brucei chromosome 8 c... 116 6e-25
AP007157_802(AP007157|pid:none) Aspergillus oryzae RIB40 genomic... 116 6e-25
BT081849_1(BT081849|pid:none) Rana catesbeiana clone rcat-evr-52... 116 6e-25
DQ115345_1(DQ115345|pid:none) Caenorhabditis remanei ubiquitin-c... 116 6e-25
EF585867_1(EF585867|pid:none) Sonneratia apetala isolate Sonn402... 116 6e-25
AK105320_1(AK105320|pid:none) Oryza sativa Japonica Group cDNA c... 116 6e-25
CP001323_218(CP001323|pid:none) Micromonas sp. RCC299 chromosome... 116 6e-25
AE014296_2283(AE014296|pid:none) Drosophila melanogaster chromos... 116 6e-25
CR382125_338(CR382125|pid:none) Kluyveromyces lactis strain NRRL... 116 6e-25
AC079279_3(AC079279|pid:none) Arabidopsis thaliana chromosome 1 ... 116 6e-25
(Q02159) RecName: Full=Ubiquitin-conjugating enzyme E2-18 kDa; ... 115 8e-25
CP001330_132(CP001330|pid:none) Micromonas sp. RCC299 chromosome... 115 1e-24
DQ067322_1(DQ067322|pid:none) Caenorhabditis remanei strain EM46... 115 1e-24
FN357349_33(FN357349|pid:none) Schistosoma mansoni genome sequen... 115 1e-24
BT081476_1(BT081476|pid:none) Rana catesbeiana clone rcat-evr-51... 115 1e-24
(Q9Y818) RecName: Full=Ubiquitin-conjugating enzyme E2 15; ... 115 1e-24
DQ144986_1(DQ144986|pid:none) Symbiodinium sp. C3 ubiquitin conj... 115 1e-24
EU244430_1(EU244430|pid:none) Capra hircus huntingtin interactin... 115 1e-24
AM270070_2(AM270070|pid:none) Aspergillus niger contig An04c0090... 115 1e-24
AM502240_59(AM502240|pid:none) Leishmania infantum chromosome 22. 115 1e-24
CR954214_77(CR954214|pid:none) Ostreococcus tauri strain OTTH059... 114 2e-24
FN314566_1(FN314566|pid:none) Schistosoma japonicum isolate Anhu... 114 2e-24
(Q17QG5) RecName: Full=Ubiquitin-conjugating enzyme E2 G2; ... 114 2e-24
AY892462_1(AY892462|pid:none) Synthetic construct Homo sapiens c... 114 2e-24
(Q9P6I1) RecName: Full=Ubiquitin-conjugating enzyme E2 16; ... 114 2e-24
DQ029119_1(DQ029119|pid:none) Caenorhabditis remanei ubiquitin c... 114 2e-24
AC117072_66(AC117072|pid:none) Dictyostelium discoideum chromoso... 114 2e-24
(O00102) RecName: Full=Ubiquitin-conjugating enzyme E2-18 kDa; ... 114 3e-24
AM494959_56(AM494959|pid:none) Leishmania braziliensis chromosom... 114 3e-24
CP000587_13(CP000587|pid:none) Ostreococcus lucimarinus CCE9901 ... 114 3e-24
AB022024_1(AB022024|pid:none) Carassius auratus mRNA for cyclin-... 113 5e-24
T16646(T16646)hypothetical protein R01H2.6 - Caenorhabditis eleg... 113 5e-24
BT076184_1(BT076184|pid:none) Caligus rogercresseyi clone crog-e... 112 7e-24
(P34477) RecName: Full=Probable ubiquitin-conjugating enzyme E2 ... 112 7e-24
BT001441_1(BT001441|pid:none) Drosophila melanogaster GH25305 fu... 112 7e-24

>(P46595) RecName: Full=Ubiquitin-conjugating enzyme E2 4;
EC=6.3.2.19; AltName: Full=Ubiquitin-protein ligase 4;
AltName: Full=Ubiquitin carrier protein 4;
&AL022117_2(AL022117|pid:none)
&CU329671_266(CU329671|pid:none) &T39300(T39300)
Length = 147

Score = 253 bits (647), Expect = 3e-66
Identities = 112/146 (76%), Positives = 136/146 (93%)
Frame = +2

Query: 86 MALKRINKELSDIAKDPPSSCSAGPDTDDIFHWTATIMGPKDSPYEGGVFFLNINFPTDY 265
MALKRIN+EL+D+ KDPPSSCSAGP DD+FHW ATIMGP DSPY GGVFFL+I+FPTDY
Sbjct: 1 MALKRINRELADLGKDPPSSCSAGPVGDDLFHWQATIMGPADSPYAGGVFFLSIHFPTDY 60

Query: 266 PFKPPKISFVTKVYHPNINASGSICLDILKEQWSPALTIPKVLLSISALLSDPNPDDPLV 445
PFKPPK++F T++YHPNIN++GSICLDIL++QWSPALTI KVLLSI +LL+DPNPDDPLV
Sbjct: 61 PFKPPKVNFTTRIYHPNINSNGSICLDILRDQWSPALTISKVLLSICSLLTDPNPDDPLV 120

Query: 446 PDIANLFKTDKNRFESNAREWTRKYA 523
P+IA+++KTD++R+E +AREWTRKYA
Sbjct: 121 PEIAHVYKTDRSRYELSAREWTRKYA 146

Lambda K H
0.318 0.134 0.401

Gapped
Lambda K H
0.267 0.0410 0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3236559
Number of Hits to DB: 1,167,483,118
Number of extensions: 25680308
Number of successful extensions: 60183
Number of sequences better than 10.0: 1253
Number of HSP's gapped: 59484
Number of HSP's successfully gapped: 1259
Length of query: 215
Length of database: 1,051,180,864
Length adjustment: 123
Effective length of query: 92
Effective length of database: 653,084,107
Effective search space: 60083737844
Effective search space used: 60083737844
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 31 (16.5 bits)

PSORT

psg: 0.55 gvh: 0.32 alm: 0.37 top: 0.53 tms: 0.00 mit: 0.32 mip: 0.03
nuc: 0.00 erl: 0.00 erm: 0.20 pox: 0.00 px2: 0.00 vac: 0.00 rnp: 0.00
act: 0.00 caa: 0.00 yqr: 0.00 tyr: 0.00 leu: 0.00 gpi: 0.00 myr: 0.00
dna: 0.00 rib: 0.00 bac: 0.00 m1a: 0.00 m1b: 0.00 m2 : 0.00 mNt: 0.00
m3a: 0.00 m3b: 0.00 m_ : 1.00

56.0 %: cytoplasmic
16.0 %: nuclear
12.0 %: mitochondrial
8.0 %: cytoskeletal
4.0 %: extracellular, including cell wall
4.0 %: peroxisomal

>> prediction for Contig-U14130-1 is cyt

VS (DIR, S) 6
VH (FL, L) 0
VF (FL, S) 0
AH (FL, L) 1
AF (FL, S) 0
SL (DIR, L) 0
SS (DIR, S) 4
SH (FL, L) 0
SF (FL, S) 0
CH (FL, L) 0
CF (FL, S) 0
FCL (DIR, L) 0
FC (DIR, S) 0
FC-IC (SUB) 0