| Contig-U14094-1 |
| Contig ID |
Contig-U14094-1 |
| Contig update |
2002.12.18 |
| Contig sequence |
 |
| Gap |
no gap |
| Contig length |
856 |
| Chromosome number (1..6, M) |
6 |
| Chromosome length |
3595308 |
| Start point |
3278798 |
| End point |
3277942 |
| Strand (PLUS/MINUS) |
MINUS |
| Number of clones |
4 |
| Number of EST |
4 |
| Link to clone list |
U14094 |
| List of clone(s) |
|
| Translated Amino Acid sequence |
|
| Translated Amino Acid sequence (All Frames) |
|
| own update |
2004. 6.10 |
| Homology vs CSM-cDNA |
|
| dna update |
2008.12.18 |
| Homology vs DNA |
Query= Contig-U14094-1 (Contig-U14094-1Q) /CSM_Contig/Contig-U14094-1Q.Seq.d
(856 letters)
Database: ddbj_A
92,845,959 sequences; 95,242,211,685 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value N
(AU268572) Dictyostelium discoideum vegetative cDNA clone:VS... 751 0.0 3
(BJ353268) Dictyostelium discoideum cDNA clone:dda49e16, 3' ... 670 0.0 4
(AU037307) Dictyostelium discoideum slug cDNA, clone SSB743. 609 0.0 3
(AU267215) Dictyostelium discoideum vegetative cDNA clone:VS... 670 0.0 4
(BJ335261) Dictyostelium discoideum cDNA clone:dda49e16, 5' ... 567 0.0 4
(AU267216) Dictyostelium discoideum vegetative cDNA clone:VS... 761 0.0 1
(AU268573) Dictyostelium discoideum vegetative cDNA clone:VS... 587 0.0 3
(AU071529) Dictyostelium discoideum slug cDNA, clone SSB743. 353 e-117 2
(AC115599) Dictyostelium discoideum chromosome 2 map 4229098... 40 0.21 5
(AC214464) Populus trichocarpa clone ACSB1117-G21, complete ... 42 1.0 2
(DQ767621) Triticum aestivum clone BAC TA1057G13, *** SEQUEN... 36 1.2 2
(AM465302) Vitis vinifera contig VV78X137919.13, whole genom... 36 1.2 4
(EI976657) SB_BBc228-O19.R SB_BBc Sorghum bicolor genomic 3'... 36 1.5 2
(AC156257) Xenopus tropicalis clone ISB1-6K16, WORKING DRAFT... 46 2.2 1
(AC156255) Xenopus tropicalis clone ISB1-49E21, WORKING DRAF... 46 2.2 1
(EJ233343) 1092404060233 Global-Ocean-Sampling_GS-27-01-01-1... 46 2.2 1
(CE191876) tigr-gss-dog-17000371465197 Dog Library Canis lup... 46 2.2 1
(EH732921) CNMM5784.b1_O05.ab1 CNM(LMS) spotted knapweed Cen... 46 2.2 1
(AM742621) Cucumis melo subsp. melo EST, clone 46d_10-E04-M13R. 46 2.2 1
(AM741639) Cucumis melo subsp. melo EST, clone 46d_20-H07-M13R. 46 2.2 1
(AM730621) Cucumis melo subsp. melo EST, clone CI_51-B10-M13R. 46 2.2 1
(AM730506) Cucumis melo subsp. melo EST, clone CI_47-C12-M13R. 46 2.2 1
(AM727945) Cucumis melo subsp. agrestis EST, clone A_35-E02-... 46 2.2 1
(AM727305) Cucumis melo subsp. agrestis EST, clone A_17-H10-... 46 2.2 1
(AM726084) Cucumis melo subsp. melo EST, clone HS_30-D12-M13R. 46 2.2 1
(AM724786) Cucumis melo subsp. melo EST, clone HS_12-E11-M13R. 46 2.2 1
(AM723779) Cucumis melo subsp. melo EST, clone HS_08-D01-M13R. 46 2.2 1
(AM715116) Cucumis melo subsp. agrestis EST, clone AI_39-A06... 46 2.2 1
(CV003524) csa01-3ms4-g05 Csa01 Cucumis sativus cDNA clone c... 46 2.2 1
(CK085831) RG8_B01 Cucumber leaf Cucumis sativus cDNA, mRNA ... 46 2.2 1
(AC168207) Mus musculus chromosome 1 clone RP24-262L12 map 1... 38 2.3 4
(AC167139) Mus musculus chromosome 1, clone RP23-397C14, com... 38 2.6 4
(AC188325) Microcebus murinus clone CH257-128O9, WORKING DRA... 40 3.8 7
(AC167963) Mus musculus chromosome 1, clone RP24-171A4, comp... 38 4.0 3
(FH714321) CHO_OF5044xh19r1.ab1 CHO_OF5 Nicotiana tabacum ge... 38 4.4 2
(AC068798) Homo sapiens 12 BAC RP11-127J23 (Roswell Park Can... 38 4.5 5
(AY898678) Megastigmus rafni isolate Mraf.USA cytochrome b (... 36 5.2 2
(AY898677) Megastigmus rafni isolate Mraf.FRA cytochrome b (... 36 5.2 2
(AY898672) Megastigmus milleri isolate Mmil.BEL cytochrome b... 36 5.2 2
(AL355980) Human DNA sequence from clone RP11-295L12 on chro... 34 5.4 6
(EJ220063) 1092351222054 Global-Ocean-Sampling_GS-27-01-01-1... 34 5.8 2
(AC167156) Bos taurus clone CH240-183K21, WORKING DRAFT SEQU... 36 5.9 6
(ET809334) CHO_OF715xn24f1.ab1 CHO_OF Nicotiana tabacum geno... 38 6.0 2
(ER658948) SB_BBc107-A14.R SB_BBc Sorghum bicolor genomic 3'... 36 6.5 2
(CR381664) Zebrafish DNA sequence from clone DKEY-200J6 in l... 44 8.6 1
(AP008209) Oryza sativa (japonica cultivar-group) genomic DN... 44 8.6 1
(AC084022) Oryza sativa chromosome 3 BAC OSJNBa0011H24 genom... 44 8.6 1
(EA686718) Sequence 65597 from patent US 7365185. 44 8.6 1
(EA650887) Sequence 29766 from patent US 7365185. 44 8.6 1
(AL445991) Human DNA sequence from clone RP11-82K18 on chrom... 44 8.6 1
(AL355861) Human DNA sequence from clone RP11-567J24 on chro... 44 8.6 1
(AL135940) Human DNA sequence from clone RP5-896L12 on chrom... 44 8.6 1
(AC097662) Homo sapiens BAC clone RP11-563C6 from 2, complet... 44 8.6 1
(AC141031) Rattus norvegicus clone CH230-477G1, WORKING DRAF... 44 8.6 1
(AC130260) Rattus norvegicus clone CH230-21I15, WORKING DRAF... 44 8.6 1
(AC125859) Rattus norvegicus clone CH230-35H21, *** SEQUENCI... 44 8.6 1
(AC123200) Rattus norvegicus clone CH230-12B14, WORKING DRAF... 44 8.6 1
(AC120669) Rattus norvegicus clone CH230-22G10, WORKING DRAF... 44 8.6 1
(AC104291) Rattus norvegicus clone CH230-132I24, *** SEQUENC... 44 8.6 1
(AP010103) Lotus japonicus genomic DNA, chromosome 2, clone:... 44 8.6 1
(AL732445) Human DNA sequence *** SEQUENCING IN PROGRESS ***... 44 8.6 1
(AL133550) Human DNA sequence *** SEQUENCING CANCELLED *** f... 44 8.6 1
(AC220977) Zea mays chromosome 1 clone CH201-548E22; ZMMBBc0... 44 8.6 1
(AC187199) Dasypus novemcinctus clone VMRC5-73I24, WORKING D... 44 8.6 1
(AC186413) Zea mays chromosome 1 clone CH201-545N4; ZMMBBc05... 44 8.6 1
(AC019280) Homo sapiens clone RP11-14I12, WORKING DRAFT SEQU... 44 8.6 1
(AY066198) Schmidtea mediterranea clone HB.8.4a unknown mRNA... 44 8.6 1
(FH969819) CHO_OF6808xd21f1.ab1 CHO_OF6 Nicotiana tabacum ge... 44 8.6 1
(FH959946) CHO_OF6771xl15r1.ab1 CHO_OF6 Nicotiana tabacum ge... 44 8.6 1
(FH648920) CHO_OF4994xl14r1.ab1 CHO_OF4 Nicotiana tabacum ge... 44 8.6 1
(FH250192) CHO_OF3008xk03f1.ab1 CHO_OF3 Nicotiana tabacum ge... 44 8.6 1
(FH048798) CHO_OF3316xa12r1.ab1 CHO_OF3 Nicotiana tabacum ge... 44 8.6 1
(ET979171) CHO_OF707xo03r1.ab1 CHO_OF Nicotiana tabacum geno... 44 8.6 1
(ET888085) CHO_OF436xb11r1.ab1 CHO_OF Nicotiana tabacum geno... 44 8.6 1
(ET724366) CHO_OF133xl14f1.ab1 CHO_OF Nicotiana tabacum geno... 44 8.6 1
(EJ987137) 1093023019032 Global-Ocean-Sampling_GS-30-02-01-1... 44 8.6 1
(EJ453996) 1093015491199 Global-Ocean-Sampling_GS-28-01-01-1... 44 8.6 1
(CG149679) PUKCO29TD ZM_0.6_1.0_KB Zea mays genomic clone ZM... 44 8.6 1
(CG149676) PUKCO29TB ZM_0.6_1.0_KB Zea mays genomic clone ZM... 44 8.6 1
(CC421121) PUHIW71TD ZM_0.6_1.0_KB Zea mays genomic clone ZM... 44 8.6 1
(AG252825) Lotus japonicus DNA, clone:LjT32n09_not. 44 8.6 1
(EL515402) CHWZ727.b1_N14.ab1 CHW(XYZ) silverleaf sunflower ... 44 8.6 1
(EL515106) CHWZ430.b1_K11.ab1 CHW(XYZ) silverleaf sunflower ... 44 8.6 1
(EL466521) CHTS5340.b2_H16.ab1 CHT(LMS) Jerusalem artichoke ... 44 8.6 1
(EL465777) CHTS4656.b1_O11.ab1 CHT(LMS) Jerusalem artichoke ... 44 8.6 1
(EL431458) CHCS5935.b1_N19.ab1 CHC(LMS) Texas blueweed Helia... 44 8.6 1
(EE658262) CHES7523.b1_E10.ab1 CHE(LMS) serpentine sunflower... 44 8.6 1
(EB499252) 1099435231913 12-DrosW-norm-1P5Kb Drosophila will... 44 8.6 1
(DY955204) CHPZ2733.b1_I11.ab1 CHP(XYZ) plains sunflower Hel... 44 8.6 1
(DY921239) CHAY4570.b1_D16.ab1 CHA(XYZ) common wild sunflowe... 44 8.6 1
(DV148952) CV03078A2C05.f1 CV03-normalized library Euphorbia... 44 8.6 1
(DV130562) CV03057A2F02.f1 CV03-normalized library Euphorbia... 44 8.6 1
(DN315953) PL06022A2F11 cDNA from juvenile hermaphodites Sch... 44 8.6 1
(DN312806) PL06013B2G07 cDNA from juvenile hermaphodites Sch... 44 8.6 1
(DN312131) PL06012A1D07 cDNA from juvenile hermaphodites Sch... 44 8.6 1
(DN307087) PL05013A1C04 cDNA from sexually mature hermaphodi... 44 8.6 1
(DN302318) PL04025A2G04 cDNA from sexually mature hermaphodi... 44 8.6 1
(DN300921) PL04020B2F03 cDNA from sexually mature hermaphodi... 44 8.6 1
(DN299445) PL04016A1C09 cDNA from sexually mature hermaphodi... 44 8.6 1
(DN296502) PL04006A2C12 cDNA from sexually mature hermaphodi... 44 8.6 1
>(AU268572) Dictyostelium discoideum vegetative cDNA clone:VSI360,
5' end single read.
Length = 546
Score = 751 bits (379), Expect(3) = 0.0
Identities = 379/379 (100%)
Strand = Plus / Plus
Query: 23 acatagaggaagacgatcaacacagcatacacatgtaagaggaaggaatttacatcaaaa 82
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3 acatagaggaagacgatcaacacagcatacacatgtaagaggaaggaatttacatcaaaa 62
Query: 83 agttaattaaacaaattaatccagcatgtagaattcaagttaagagtgttcaaattttaa 142
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 63 agttaattaaacaaattaatccagcatgtagaattcaagttaagagtgttcaaattttaa 122
Query: 143 ctagtttaattagagatacaacaattagtattatgaatgaagcatttcatttagtacaac 202
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123 ctagtttaattagagatacaacaattagtattatgaatgaagcatttcatttagtacaac 182
Query: 203 tttcaaataaaagaaccttaagtgcacgtgacgttcaaacttccgttcgtttatgtactg 262
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 183 tttcaaataaaagaaccttaagtgcacgtgacgttcaaacttccgttcgtttatgtactg 242
Query: 263 ttggtgaaatttcaagacatgcagtctctgaaggtgttaaaagagttacaaattttaatt 322
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 243 ttggtgaaatttcaagacatgcagtctctgaaggtgttaaaagagttacaaattttaatt 302
Query: 323 ccgcaaagcaatatccaccacaaccaccaccagcaaaaaccgccactccttcatcccctt 382
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 303 ccgcaaagcaatatccaccacaaccaccaccagcaaaaaccgccactccttcatcccctt 362
Query: 383 cttcaattcctgctccacc 401
|||||||||||||||||||
Sbjct: 363 cttcaattcctgctccacc 381
Score = 238 bits (120), Expect(3) = 0.0
Identities = 120/120 (100%)
Strand = Plus / Plus
Query: 449 ggtaaaacaaatgaattataattacagaatttcaaattcttcaatgcattatttatcagc 508
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 427 ggtaaaacaaatgaattataattacagaatttcaaattcttcaatgcattatttatcagc 486
Query: 509 tgttattgaatatttgctttctgaaatattagagttatctagtaatggggcagtatcagc 568
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 487 tgttattgaatatttgctttctgaaatattagagttatctagtaatggggcagtatcagc 546
Score = 97.6 bits (49), Expect(3) = 0.0
Identities = 49/49 (100%)
Strand = Plus / Plus
Query: 401 ccaatttcccacccaccaataatcccacattcttatttaaaaacaaagg 449
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 ccaatttcccacccaccaataatcccacattcttatttaaaaacaaagg 428
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Number of Sequences: 92845959
Number of Hits to DB: 978,859,446
Number of extensions: 59776182
Number of successful extensions: 5022933
Number of sequences better than 10.0: 115
Length of query: 856
Length of database: 95,242,211,685
Length adjustment: 24
Effective length of query: 832
Effective length of database: 97,308,875,965
Effective search space: 80960984802880
Effective search space used: 80960984802880
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)
|
| protein update |
2009. 7. 9 |
| Homology vs Protein |
Query= Contig-U14094-1 (Contig-U14094-1Q) /CSM_Contig/Contig-U14094-1Q.Seq.d
(856 letters)
Database: nrp_B
3,236,559 sequences; 1,051,180,864 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF406555_1(AF406555|pid:none) Toxoplasma gondii histone H2B vari... 82 3e-14
FB334622_1(FB334622|pid:none) Sequence 2148 from Patent WO200711... 81 5e-14
(P16890) RecName: Full=Late histone H2B.L4; Flags: Fragment; &S... 81 5e-14
AM910996_210(AM910996|pid:none) Plasmodium knowlesi strain H chr... 81 5e-14
AL844506_139(AL844506|pid:none) Plasmodium falciparum 3D7 chromo... 81 5e-14
(P02287) RecName: Full=Histone H2B.1, embryonic; &J01178_1(J011... 80 7e-14
(Q7M400) RecName: Full=Histone H2B; 80 9e-14
A61301(A61301;A61302)histone H2B - Tetrahymena pyriformis 80 9e-14
(P07794) RecName: Full=Late histone H2B.2.1; &B25077(B25077) &M... 80 9e-14
(P08993) RecName: Full=Histone H2B.1; Short=H2B-1; &A2... 80 9e-14
(Q64524) RecName: Full=Histone H2B type 2-E; AltName: Full=H2b 6... 79 1e-13
FB334624_1(FB334624|pid:none) Sequence 2150 from Patent WO200711... 79 2e-13
AE014186_48(AE014186|pid:none) Plasmodium falciparum 3D7 chromos... 79 2e-13
Y17725_1(Y17725|pid:none) Plasmodium vivax mRNA for histone 2B. 79 2e-13
V01143_2(V01143|pid:none) Sea urchin (P. miliaris) gene for hist... 79 2e-13
DQ118972_1(DQ118972|pid:none) Toxoplasma gondii histone 2Ba mRNA... 79 3e-13
(P02289) RecName: Full=Histone H2B, embryonic; 78 3e-13
HSUR2S(A02617)histone H2B, embryonic - sea urchin (Strongylocent... 78 3e-13
BC066243_1(BC066243|pid:none) Homo sapiens histone cluster 1, H2... 78 3e-13
PN0142(PN0142)histone H2B - Neurospora crassa (fragment) 78 3e-13
(Q96A08) RecName: Full=Histone H2B type 1-A; AltName: Full=Histo... 78 3e-13
CR940353_61(CR940353|pid:none) Theileria annulata strain Ankara ... 78 3e-13
HSUR6M(A02616)histone H2B.2, embryonic - sea urchin (Psammechinu... 78 4e-13
CR954212_99(CR954212|pid:none) Ostreococcus tauri strain OTTH059... 77 6e-13
S68536(S68536)histone H2B - starfish (Asterina pectinifera) 77 6e-13
(Q7M4G7) RecName: Full=Histone H2B; 77 6e-13
CP000588_179(CP000588|pid:none) Ostreococcus lucimarinus CCE9901... 77 6e-13
(P78567) RecName: Full=Histone H2B; &FB334738_1(FB334738|pid:no... 77 6e-13
BC066240_1(BC066240|pid:none) Homo sapiens histone cluster 1, H2... 77 6e-13
(Q5KMT4) RecName: Full=Histone H2B; &AE017342_57(AE017342|pid:n... 77 6e-13
DQ252495_1(DQ252495|pid:none) Solanum tuberosum clone 067A06 his... 77 7e-13
EU952309_1(EU952309|pid:none) Zea mays clone 1277159 histone H2B... 77 7e-13
CR855675_1(CR855675|pid:none) Xenopus tropicalis finished cDNA, ... 77 7e-13
HSXLB1(B92918;A90626;A02608;A24510)histone H2B.1 - African clawe... 77 7e-13
(A2WKT4) RecName: Full=Histone H2B.5; &(Q94JE1) RecName: Fu &AP... 77 7e-13
(A2Y7R3) RecName: Full=Histone H2B.9; &(Q6F362) RecName: Fu &AC... 77 7e-13
(Q27750) RecName: Full=Histone H2B.2, sperm; 77 7e-13
(P16889) RecName: Full=Late histone H2B.L3; 77 7e-13
AJ556871_1(AJ556871|pid:none) Expression vector pET3-H2B H2B gen... 77 7e-13
(A2WWU2) RecName: Full=Histone H2B.11; &(Q943L2) RecName: Fu &A... 77 7e-13
BC077692_1(BC077692|pid:none) Xenopus tropicalis histone 1, H2bk... 77 7e-13
M11087_1(M11087|pid:none) Sea urchin (P.miliaris) sperm histone ... 77 7e-13
EF082970_1(EF082970|pid:none) Picea sitchensis clone WS02719_F03... 77 7e-13
CR760086_1(CR760086|pid:none) Xenopus tropicalis finished cDNA, ... 77 7e-13
S33220(S33220) histone H2B.A - African clawed frog &X71389_1(X7... 77 7e-13
(A2WKP5) RecName: Full=Histone H2B.4; &(Q94JJ4) RecName: Fu &AB... 77 1e-12
BT071169_1(BT071169|pid:none) Picea sitchensis clone WS02775_N09... 77 1e-12
AB195237_1(AB195237|pid:none) Paramecium caudatum macronuclear H... 77 1e-12
EF083265_1(EF083265|pid:none) Picea sitchensis clone WS02811_J22... 77 1e-12
BT084998_1(BT084998|pid:none) Zea mays full-length cDNA clone ZM... 77 1e-12
(A2YWI3) RecName: Full=Histone H2B.2; &(Q6ZBP3) RecName: Fu &AP... 77 1e-12
CU928169_425(CU928169|pid:none) Kluyveromyces thermotolerans str... 77 1e-12
(Q94JJ7) RecName: Full=Histone H2B.3; &AB379818_1(AB379818|pid:... 77 1e-12
(A2WKP3) RecName: Full=Histone H2B.3; 77 1e-12
EF087115_1(EF087115|pid:none) Picea sitchensis clone WS02913_F12... 77 1e-12
AJ306724_1(AJ306724|pid:none) Pinus pinaster mRNA for putative h... 77 1e-12
BT087239_1(BT087239|pid:none) Zea mays full-length cDNA clone ZM... 77 1e-12
AP008207_312(AP008207|pid:none) Oryza sativa (japonica cultivar-... 77 1e-12
EU850440_4(EU850440|pid:none) Philodina roseola rho GTPase activ... 77 1e-12
EF081607_1(EF081607|pid:none) Picea sitchensis clone WS02716_C18... 77 1e-12
(Q75VN4) RecName: Full=Histone H2B; &AB124798_1(AB124798|pid:no... 77 1e-12
EU652317_12(EU652317|pid:none) Philodina roseola GTP binding pro... 77 1e-12
AY581839_1(AY581839|pid:none) Cynodon dactylon putative histone ... 77 1e-12
EF084180_1(EF084180|pid:none) Picea sitchensis clone WS0291_H02 ... 77 1e-12
(Q43217) RecName: Full=Histone H2B.3; AltName: Full=wcH2B-8; &D... 77 1e-12
EU652318_4(EU652318|pid:none) Philodina roseola 7TM protein 66, ... 77 1e-12
AB481112_1(AB481112|pid:none) Bombyx mori H2B-L mRNA for histone... 77 1e-12
CU928171_697(CU928171|pid:none) Kluyveromyces thermotolerans str... 77 1e-12
(A2WKS3) RecName: Full=Histone H2B.10; 77 1e-12
S48838(S48838) histone H2B - garden asparagus &X82362_1(X82362|... 76 1e-12
CP001160_319(CP001160|pid:none) Thalassiosira pseudonana CCMP133... 76 1e-12
EU961565_1(EU961565|pid:none) Zea mays clone 236575 histone H2B.... 76 1e-12
(O65818) RecName: Full=Histone H2B.2; AltName: Full=LeH2B-2; 76 1e-12
(P02294) RecName: Full=Histone H2B.2; &AY693063_1(AY693063|pid:... 76 1e-12
AJ224931_1(AJ224931|pid:none) Lycopersicon esculentum H2B-2 mRNA... 76 1e-12
CU928173_407(CU928173|pid:none) Zygosaccharomyces rouxii strain ... 76 1e-12
BT042328_1(BT042328|pid:none) Zea mays full-length cDNA clone ZM... 76 1e-12
FB334598_1(FB334598|pid:none) Sequence 2124 from Patent WO200711... 76 1e-12
HSSF2M(A02612)histone H2B, sperm - starfish (Marthasterias glaci... 76 1e-12
AB195236_1(AB195236|pid:none) Paramecium caudatum macronuclear H... 76 1e-12
V01356_1(V01356|pid:none) Sea urchin genes for the histones H2B ... 76 1e-12
HSSF22(A02613)histone H2B, gonadal - starfish (Asterias rubens) 76 1e-12
(P35069) RecName: Full=Histone H2B.3; &D56612(D56612) &FB334712... 76 1e-12
(P02293) RecName: Full=Histone H2B.1; AltName: Full=Suppressor o... 76 1e-12
BC150432_1(BC150432|pid:none) Danio rerio zgc:173585, mRNA (cDNA... 76 2e-12
BT041741_1(BT041741|pid:none) Zea mays full-length cDNA clone ZM... 76 2e-12
CP001325_416(CP001325|pid:none) Micromonas sp. RCC299 chromosome... 76 2e-12
(O65821) RecName: Full=Histone H2B.1; AltName: Full=LeH2B-1; &A... 76 2e-12
CP001328_412(CP001328|pid:none) Micromonas sp. RCC299 chromosome... 76 2e-12
(Q8CGP1) RecName: Full=Histone H2B type 1-K; &AL590614_4(AL5906... 76 2e-12
EU973840_1(EU973840|pid:none) Zea mays clone 421011 histone H2B.... 76 2e-12
(P70696) RecName: Full=Histone H2B type 1-A; AltName: Full=Histo... 76 2e-12
(P49120) RecName: Full=Histone H2B.4; &BT041257_1(BT041257|pid:... 76 2e-12
(P54348) RecName: Full=Histone H2B.5; Short=H2B; &BT03... 76 2e-12
EU958957_1(EU958957|pid:none) Zea mays clone 208460 histone H2B.... 76 2e-12
FB334612_1(FB334612|pid:none) Sequence 2138 from Patent WO200711... 76 2e-12
AX781308_1(AX781308|pid:none) Sequence 9 from Patent WO03029827. 76 2e-12
(P06899) RecName: Full=Histone H2B type 1-J; AltName: Full=H2B.r... 76 2e-12
AB435638_1(AB435638|pid:none) Oryzias latipes H2B mRNA for histo... 76 2e-12
(P05621) RecName: Full=Histone H2B.2; 75 2e-12
(Q2M2T1) RecName: Full=Histone H2B type 1-K; &BC111653_1(BC1116... 75 2e-12
(P16867) RecName: Full=Histone H2B.3; AltName: Full=H2B-III; &F... 75 2e-12
(Q8CGP0) RecName: Full=Histone H2B type 3-B; &(Q8N257) RecName:... 75 2e-12
(P0C1H5) RecName: Full=Histone H2B 7; AltName: Full=H2B VII; &B... 75 2e-12
(Q2U5A9) RecName: Full=Histone H2B; 75 2e-12
(P02291) RecName: Full=Histone H2B.2, sperm; 75 2e-12
(P16868) RecName: Full=Histone H2B.4; AltName: Full=H2B-IV; &FB... 75 2e-12
FB335013_1(FB335013|pid:none) Sequence 2539 from Patent WO200711... 75 2e-12
(A1D8G9) RecName: Full=Histone H2B; &(Q4WWC5) RecName: Fu 75 2e-12
EU652316_7(EU652316|pid:none) Adineta vaga dihydrogenpyrimidine ... 75 2e-12
(O60814) RecName: Full=Histone H2B type 1-K; Short=H2B ... 75 2e-12
AY158943_1(AY158943|pid:none) Mus musculus histone protein Hist3... 75 2e-12
(P06900) RecName: Full=Histone H2B 1.2; Short=H2B1.2; ... 75 2e-12
AM920435_860(AM920435|pid:none) Penicillium chrysogenum Wisconsi... 75 2e-12
A45945(A45945) histone H2B, testis-specific - rat &M18045_1(M18... 75 2e-12
(Q0CBD1) RecName: Full=Histone H2B; 75 2e-12
(O22582) RecName: Full=Histone H2B; &AF025667_1(AF025667|pid:no... 75 3e-12
AF048824_1(AF048824|pid:none) Malus domestica histone H2B mRNA, ... 75 3e-12
EF146303_1(EF146303|pid:none) Populus trichocarpa clone WS0116_P... 75 3e-12
(Q6CK60) RecName: Full=Histone H2B.1; &CR382126_574(CR382126|pi... 75 3e-12
(Q8I1N0) RecName: Full=Histone H2B; &AB073635_3(AB073635|pid:no... 75 3e-12
(O49118) RecName: Full=Histone H2B; AltName: Full=CaH2B; &AF038... 75 3e-12
AF378198_5(AF378198|pid:none) Rhynchosciara americana histone H1... 75 3e-12
(P83863) RecName: Full=Histone H2B; Flags: Fragments; 75 3e-12
AJ400863_1(AJ400863|pid:none) Cicer arietinum mRNA for histone H... 75 3e-12
AY389709_1(AY389709|pid:none) Hyacinthus orientalis histone H2B ... 75 3e-12
(Q6CMV8) RecName: Full=Histone H2B.2; &CR382125_751(CR382125|pi... 75 3e-12
(P19374) RecName: Full=Histone H2B; &S11313(S11313) &X53330_2(X... 75 3e-12
FB334944_1(FB334944|pid:none) Sequence 2470 from Patent WO200711... 75 3e-12
BC076088_1(BC076088|pid:none) Danio rerio zgc:92591, mRNA (cDNA ... 75 3e-12
(P02283) RecName: Full=Histone H2B; &(P59781) RecName: Fu &(P59... 75 3e-12
FB334852_1(FB334852|pid:none) Sequence 2378 from Patent WO200711... 75 3e-12
(O65819) RecName: Full=Histone H2B.3; AltName: Full=LeH2B-3; Fla... 75 3e-12
(P30757) RecName: Full=Histone H2B; &S16084(S16084;A57915) 75 3e-12
(Q27442) RecName: Full=Histone H2B; &FB334594_1(FB334594|pid:no... 75 3e-12
EU215423_2(EU215423|pid:none) Anthonomus grandis histone H2A, hi... 75 3e-12
BT076601_1(BT076601|pid:none) Caligus rogercresseyi clone crog-e... 75 3e-12
(A5DWF0) RecName: Full=Histone H2B; 75 3e-12
EZ000286_1(EZ000286|pid:none) TSA: Amblyomma americanum Contig39... 75 3e-12
FB334628_1(FB334628|pid:none) Sequence 2154 from Patent WO200711... 75 3e-12
AM454330_1(AM454330|pid:none) Vitis vinifera contig VV78X210136.... 75 3e-12
BC098112_1(BC098112|pid:none) Homo sapiens histone cluster 2, H2... 75 4e-12
(P10853) RecName: Full=Histone H2B type 1-F/J/L; AltName: Full=H... 75 4e-12
(Q5BJA5) RecName: Full=Histone H2B 1/2; &BC091558_1(BC091558|pi... 75 4e-12
A56624(A56624;S14527) histone H2B.2 - human &X57138_1(X57138|pi... 75 4e-12
FB334618_1(FB334618|pid:none) Sequence 2144 from Patent WO200711... 75 4e-12
FB334644_1(FB334644|pid:none) Sequence 2170 from Patent WO200711... 75 4e-12
AC024696_6(AC024696|pid:none) Caenorhabditis elegans cosmid F07B... 75 4e-12
FB334560_1(FB334560|pid:none) Sequence 2086 from Patent WO200711... 75 4e-12
BC126369_1(BC126369|pid:none) Homo sapiens H2B histone family, m... 75 4e-12
(Q9LFF6) RecName: Full=Putative histone H2B.8; AltName: Full=HTB... 75 4e-12
FB334596_1(FB334596|pid:none) Sequence 2122 from Patent WO200711... 75 4e-12
BC152000_1(BC152000|pid:none) Danio rerio zgc:171937, mRNA (cDNA... 75 4e-12
BC115792_1(BC115792|pid:none) Mus musculus histone cluster 1, H2... 75 4e-12
(Q5RCP8) RecName: Full=Histone H2B type 2-E; &CR858221_1(CR8582... 75 4e-12
FB334808_1(FB334808|pid:none) Sequence 2334 from Patent WO200711... 75 4e-12
(P04255) RecName: Full=Histone H2B 1; &AF047656_5(AF047656|pid:... 75 4e-12
(P40283) RecName: Full=Histone H2B.11; AltName: Full=HTB4; &AB0... 75 4e-12
DQ418455_2(DQ418455|pid:none) Chlamys farreri core histone gene ... 75 4e-12
(Q9LGH4) RecName: Full=Histone H2B.6; &AP002522_35(AP002522|pid... 75 4e-12
(P0C1H3) RecName: Full=Histone H2B 1/2/3/4/6; AltName: Full=H2B ... 75 4e-12
M60756_1(M60756|pid:none) Human histone H2B.1 mRNA, 3' end. 75 4e-12
FB334616_1(FB334616|pid:none) Sequence 2142 from Patent WO200711... 75 4e-12
BC124397_1(BC124397|pid:none) Danio rerio zgc:112234, mRNA (cDNA... 75 4e-12
(Q6PC60) RecName: Full=Histone H2B 3; &BC059463_1(BC059463|pid:... 75 4e-12
(P57053) RecName: Full=Histone H2B type F-S; Short=H2B.... 75 4e-12
(Q99880) RecName: Full=Histone H2B type 1-L; AltName: Full=H2B.c... 75 4e-12
(Q4HTT2) RecName: Full=Histone H2B; 75 4e-12
(P06145) RecName: Full=Histone H2B.1, sperm; &HSURBS(S07376) &X... 75 4e-12
(Q16778) RecName: Full=Histone H2B type 2-E; AltName: Full=H2B.q... 75 4e-12
EF678148_1(EF678148|pid:none) Picea sitchensis clone WS02823_J20... 75 4e-12
X05096_1(X05096|pid:none) Chicken histone H2B gene (pRR3c-3.5). 75 4e-12
(P23527) RecName: Full=Histone H2B type 1-O; AltName: Full=H2B.n... 75 4e-12
(Q9SF55) RecName: Full=Histone H2B.5; AltName: Full=HTB7; &AC01... 75 4e-12
DQ891028_1(DQ891028|pid:none) Synthetic construct clone IMAGE:10... 75 4e-12
(P02284) RecName: Full=Histone H2B, gonadal; 75 4e-12
(A3LXE6) RecName: Full=Histone H2B.2; &CP000500_275(CP000500|pi... 74 5e-12
(Q99879) RecName: Full=Histone H2B type 1-M; Short=H2B.... 74 5e-12
Z80783_1(Z80783|pid:none) H.sapiens H2B/l gene. 74 5e-12
M13635_1(M13635|pid:none) Sea urchin (L.pictus) testis histone H... 74 5e-12
(Q1E5N0) RecName: Full=Histone H2B; 74 5e-12
BC106899_1(BC106899|pid:none) Homo sapiens histone cluster 1, H2... 74 5e-12
FM992688_389(FM992688|pid:none) Candida dubliniensis CD36 chromo... 74 5e-12
(Q59VP1) RecName: Full=Histone H2B.2; 74 5e-12
(Q5G577) RecName: Full=Histone H2B; &AY850347_1(AY850347|pid:no... 74 5e-12
(A3LZZ1) RecName: Full=Histone H2B.1; &CP000502_102(CP000502|pi... 74 5e-12
BC067485_1(BC067485|pid:none) Homo sapiens histone cluster 1, H2... 74 5e-12
BC067487_1(BC067487|pid:none) Homo sapiens histone cluster 1, H2... 74 5e-12
AY813241_1(AY813241|pid:none) Schistosoma japonicum SJCHGC01604 ... 74 5e-12
(A2WKS5) RecName: Full=Histone H2B.8; &(Q9LGH8) RecName: Fu &AP... 74 5e-12
(Q875B7) RecName: Full=Histone H2B; &BX088700_7(BX088700|pid:no... 74 5e-12
(Q43216) RecName: Full=Histone H2B.5; AltName: Full=wcH2B-6; &D... 74 5e-12
(A2WKT1) RecName: Full=Histone H2B.6; 74 5e-12
HSUR2P(A02618)histone H2B.1, sperm - sea urchin (Parechinus angu... 74 5e-12
FB334963_1(FB334963|pid:none) Sequence 2489 from Patent WO200711... 74 5e-12
(P02290) RecName: Full=Histone H2B.1, sperm; 74 5e-12
FB334670_1(FB334670|pid:none) Sequence 2196 from Patent WO200711... 74 5e-12
(P21897) RecName: Full=Histone H2B; &D56580(D56580;S18005) &FB3... 74 5e-12
(Q41575) RecName: Full=Histone H2B.6; AltName: Full=H2B123; &D3... 74 5e-12
(Q5QNW6) RecName: Full=Histone H2B type 2-F; &(Q64525) RecName:... 74 5e-12
(P62808) RecName: Full=Histone H2B type 1; &(Q5R893) RecName: F... 74 5e-12
(P54347) RecName: Full=Histone H2B.4; AltName: Full=H2B-IV; &S5... 74 6e-12
DQ268853_1(DQ268853|pid:none) Solanum tuberosum clone 167E08 his... 74 6e-12
FB334924_1(FB334924|pid:none) Sequence 2450 from Patent WO200711... 74 6e-12
EF145917_1(EF145917|pid:none) Populus trichocarpa clone WS0114_E... 74 6e-12
EF148635_1(EF148635|pid:none) Populus trichocarpa x Populus delt... 74 6e-12
(P50565) RecName: Full=Histone H2B.1; AltName: Full=H2B-I; &L41... 74 6e-12
AM774337_2(AM774337|pid:none) Reporter vector pCH2B. 74 6e-12
FB334912_1(FB334912|pid:none) Sequence 2438 from Patent WO200711... 74 6e-12
(O23629) RecName: Full=Histone H2B.6; AltName: Full=HTB9; AltNam... 74 6e-12
(P54345) RecName: Full=Histone H2B.2; AltName: Full=H2B-II; &S5... 74 6e-12
FM992690_367(FM992690|pid:none) Candida dubliniensis CD36 chromo... 74 6e-12
BT051494_1(BT051494|pid:none) Medicago truncatula clone MTYF1_F2... 74 6e-12
EF694979_1(EF694979|pid:none) Arnebia euchroma histone H2B (H2B)... 74 6e-12
EF222479_1(EF222479|pid:none) Medicago truncatula putative histo... 74 6e-12
(Q1S9I9) RecName: Full=Probable histone H2B.1; &AC134242_29(AC1... 74 6e-12
(Q6BKW7) RecName: Full=Histone H2B.2; &CR382138_803(CR382138|pi... 74 6e-12
(Q6BRG2) RecName: Full=Histone H2B.1; &CR382136_722(CR382136|pi... 74 6e-12
(Q9LZT0) RecName: Full=Histone H2B.7; AltName: Full=HTB11; &AL1... 74 6e-12
FB334997_1(FB334997|pid:none) Sequence 2523 from Patent WO200711... 74 6e-12
EF148654_1(EF148654|pid:none) Populus trichocarpa x Populus delt... 74 6e-12
FB334876_1(FB334876|pid:none) Sequence 2402 from Patent WO200711... 74 6e-12
(Q2PFX4) RecName: Full=Histone H2B type 1-K; Short=H2B ... 74 6e-12
(Q9LZ45) RecName: Full=Putative histone H2B.9; AltName: Full=HTB... 74 8e-12
FN316014_1(FN316014|pid:none) Schistosoma japonicum isolate Anhu... 74 8e-12
X02916_2(X02916|pid:none) Rainbow trout histone H4 and H2B genes. 74 8e-12
AY088636_1(AY088636|pid:none) Arabidopsis thaliana clone 8711 mR... 74 8e-12
FB334836_1(FB334836|pid:none) Sequence 2362 from Patent WO200711... 74 8e-12
HSTR2B(A92961;A93779;A02609;B24552)histone H2B - rainbow trout 74 8e-12
BT075469_1(BT075469|pid:none) Osmerus mordax clone omor-eva-509-... 74 8e-12
FB334938_1(FB334938|pid:none) Sequence 2464 from Patent WO200711... 74 8e-12
(P82887) RecName: Full=Histone H2B; 74 8e-12
(Q1SU99) RecName: Full=Probable histone H2B.3; &AC125368_11(AC1... 74 8e-12
(P69069) RecName: Full=Histone H2B; &(P69070) RecName: Fu 74 8e-12
(P35067) RecName: Full=Histone H2B; &FB334736_1(FB334736|pid:no... 73 1e-11
AK292712_1(AK292712|pid:none) Homo sapiens cDNA FLJ78520 complet... 73 1e-11
BC126923_1(BC126923|pid:none) Mus musculus histone cluster 1, H2... 73 1e-11
AK158416_1(AK158416|pid:none) Mus musculus adult inner ear cDNA,... 73 1e-11
BT079249_1(BT079249|pid:none) Esox lucius clone eluc-evq-507-203... 73 1e-11
FB334983_1(FB334983|pid:none) Sequence 2509 from Patent WO200711... 73 1e-11
AK036389_1(AK036389|pid:none) Mus musculus adult male bone cDNA,... 73 1e-11
FB334842_1(FB334842|pid:none) Sequence 2368 from Patent WO200711... 73 1e-11
EU446969_1(EU446969|pid:none) Synthetic construct Homo sapiens c... 73 1e-11
BC011440_1(BC011440|pid:none) Mus musculus H2b histone family me... 73 1e-11
FB334604_1(FB334604|pid:none) Sequence 2130 from Patent WO200711... 73 1e-11
AY957499_10(AY957499|pid:none) Bos taurus glutamate-cysteine lig... 72 2e-11
AY086049_1(AY086049|pid:none) Arabidopsis thaliana clone 20822 m... 72 2e-11
AY267742_1(AY267742|pid:none) Mytilus edulis histone H2B (H2B) g... 72 2e-11
X05094_1(X05094|pid:none) Chicken histone H2B gene (pKR1a-1.3). 72 2e-11
FB335079_1(FB335079|pid:none) Sequence 2605 from Patent WO200711... 72 2e-11
M11494_2(M11494|pid:none) Yeast (S.pombe) histone H2A-alpha and ... 72 2e-11
AY267740_1(AY267740|pid:none) Mytilus galloprovincialis histone ... 72 2e-11
(P62807) RecName: Full=Histone H2B type 1-C/E/F/G/I; AltName: Fu... 72 2e-11
BC105595_1(BC105595|pid:none) Homo sapiens histone cluster 1, H2... 72 3e-11
(Q1SWQ1) RecName: Full=Probable histone H2B.2; &AC134242_30(AC1... 72 3e-11
AP008211_2016(AP008211|pid:none) Oryza sativa (japonica cultivar... 72 3e-11
(Q0U1A0) RecName: Full=Histone H2B; 71 4e-11
(A5DJJ1) RecName: Full=Histone H2B.1; 71 4e-11
AY267741_1(AY267741|pid:none) Mytilus californianus histone H2B ... 71 4e-11
AP007167_6(AP007167|pid:none) Aspergillus oryzae RIB40 genomic D... 71 5e-11
(P93354) RecName: Full=Histone H2B; &FB334756_1(FB334756|pid:no... 71 5e-11
(Q99285) RecName: Full=Histone H2B; Flags: Fragments; 71 5e-11
U64845_11(U64845|pid:none) Caenorhabditis elegans cosmid F45F2, ... 70 7e-11
T28965(T28965)hypothetical protein F45F2.2 - Caenorhabditis eleg... 70 7e-11
AJ238321_1(AJ238321|pid:none) Asellus aquaticus 5S rRNA gene, hi... 70 9e-11
U12632_1(U12632|pid:none) Emericella nidulans R153 core histone ... 70 1e-10
FB334668_1(FB334668|pid:none) Sequence 2194 from Patent WO200711... 70 1e-10
BT049604_1(BT049604|pid:none) Salmo salar clone ssal-evd-552-272... 69 2e-10
B45945(B45945)histone H2B - rat 69 3e-10
(Q00715) RecName: Full=Histone H2B type 1; &S26185(S26185) &X59... 69 3e-10
AM774336_1(AM774336|pid:none) Sordaria macrospora partial hh2b g... 68 4e-10
AY179218_1(AY179218|pid:none) Trypanosoma brucei brucei histone ... 68 4e-10
(Q9SGE3) RecName: Full=Histone H2B.2; AltName: Full=HTB8; &AC01... 67 6e-10
EU958626_1(EU958626|pid:none) Zea mays clone 1706371 hypothetica... 67 6e-10
AM494946_140(AM494946|pid:none) Leishmania braziliensis chromoso... 67 1e-09
AM494956_34(AM494956|pid:none) Leishmania braziliensis chromosom... 66 2e-09
AP008211_1384(AP008211|pid:none) Oryza sativa (japonica cultivar... 65 2e-09
AM459104_2(AM459104|pid:none) Vitis vinifera contig VV78X102102.... 65 3e-09
AY542978_1(AY542978|pid:none) Bigelowiella natans histone H2B (H... 65 4e-09
X95690_1(X95690|pid:none) A.cepa mRNA for histone H2b-like prote... 64 8e-09
AM502247_32(AM502247|pid:none) Leishmania infantum chromosome 29. 63 1e-08
EU951788_1(EU951788|pid:none) Zea mays clone 1000340 histone H2B... 63 1e-08
AM502227_141(AM502227|pid:none) Leishmania infantum chromosome 9... 63 1e-08
AM502237_4(AM502237|pid:none) Leishmania infantum chromosome 19. 63 1e-08
AF336276_1(AF336276|pid:none) Leishmania major histone H2B (H2B)... 63 1e-08
CT005248_146(CT005248|pid:none) Leishmania major strain Friedlin... 63 1e-08
AJ297301_1(AJ297301|pid:none) Pinus pinaster partial mRNA for hi... 62 2e-08
EU728806_1(EU728806|pid:none) Chromera velia isolate RM12 histon... 62 2e-08
(P27795) RecName: Full=Histone H2B; &FJ222458_1(FJ222458|pid:no... 62 3e-08
Y13396_1(Y13396|pid:none) Leishmania infantum mRNA for histone H... 62 3e-08
AM502235_135(AM502235|pid:none) Leishmania infantum chromosome 17. 61 4e-08
AP006162_2(AP006162|pid:none) Oryza sativa Japonica Group genomi... 61 4e-08
AM502246_21(AM502246|pid:none) Leishmania infantum chromosome 28. 60 7e-08
U88330_1(U88330|pid:none) Drosophila virilis histone H2B (H2B) g... 60 9e-08
EU961792_1(EU961792|pid:none) Zea mays clone 238263 unknown mRNA. 60 1e-07
AK005982_1(AK005982|pid:none) Mus musculus adult male testis cDN... 60 1e-07
AF356817_1(AF356817|pid:none) Lolium perenne histone H2B-1 mRNA,... 59 2e-07
EU958907_1(EU958907|pid:none) Zea mays clone 208351 hypothetical... 59 2e-07
AB168579_1(AB168579|pid:none) Macaca fascicularis testis cDNA cl... 58 4e-07
BT087111_1(BT087111|pid:none) Zea mays full-length cDNA clone ZM... 57 6e-07
BC106916_1(BC106916|pid:none) Homo sapiens histone cluster 2, H2... 56 1e-06
AF099109_1(AF099109|pid:none) Leishmania major histone H2B varia... 56 1e-06
(P40284) RecName: Full=Histone H2B; &L29388_1(L29388|pid:none) 55 4e-06
AB002724_1(AB002724|pid:none) Entamoeba histolytica mRNA for his... 53 1e-05
AJ011677_1(AJ011677|pid:none) Trypanosoma brucei mRNA for histon... 52 3e-05
AY283369_1(AY283369|pid:none) Homo sapiens histone H2B-related p... 52 3e-05
AJ698930_1(AJ698930|pid:none) Populus euramericana partial mRNA ... 52 3e-05
U82927_1(U82927|pid:none) Drosophila virilis histone H2b (H2B) g... 50 7e-05
AP008207_315(AP008207|pid:none) Oryza sativa (japonica cultivar-... 49 3e-04
AJ006959_1(AJ006959|pid:none) Botrytis fuckeliana H2A.1 gene. 48 4e-04
(Q1E5N1) RecName: Full=Histone H2A; 48 4e-04
FN392320_452(FN392320|pid:none) Pichia pastoris GS115 chromosome... 48 4e-04
(Q4HTT1) RecName: Full=Histone H2A; 48 5e-04
(P08844) RecName: Full=Histone H2A; &A27332(A27332) &AM920435_8... 48 5e-04
(Q0U1A1) RecName: Full=Histone H2A; 48 5e-04
(A1CJ10) RecName: Full=Histone H2A; &(A1D8G8) RecName: Fu &(Q2U... 48 5e-04
(Q9HGX4) RecName: Full=Histone H2A; &AJ293758_1(AJ293758|pid:no... 48 5e-04
(P0C952) RecName: Full=Histone H2A; &(P0C953) RecName: Fu &AM27... 48 5e-04
(O74268) RecName: Full=Histone H2A; 48 5e-04
(Q875B8) RecName: Full=Histone H2A; &BX088700_6(BX088700|pid:no... 48 5e-04
(Q8X132) RecName: Full=Histone H2A; &AY062171_1(AY062171|pid:no... 48 5e-04
HSTE91(A02600)histone H2A.1 - Tetrahymena pyriformis 47 6e-04
AL606464_5(AL606464|pid:none) Mouse DNA sequence from clone RP23... 47 6e-04
(P02274) RecName: Full=Histone H2A.2; 47 6e-04
AK001765_1(AK001765|pid:none) Homo sapiens cDNA FLJ10903 fis, cl... 47 6e-04
EU652315_9(EU652315|pid:none) Adineta vaga speckle-type POZ prot... 47 8e-04
AB195235_1(AB195235|pid:none) Paramecium caudatum macronuclear H... 47 8e-04
EU652317_13(EU652317|pid:none) Philodina roseola GTP binding pro... 47 8e-04
(Q9LHQ5) RecName: Full=Probable histone H2A.2; AltName: Full=HTA... 47 0.001
(A5DWF1) RecName: Full=Histone H2A.1; 47 0.001
(Q757L4) RecName: Full=Histone H2A.2; &AE016818_344(AE016818|pi... 47 0.001
(P04912) RecName: Full=Histone H2A.2; &AY693115_1(AY693115|pid:... 47 0.001
M18455_1(M18455|pid:none) Saccharomyces cerevisiae adenylate kin... 47 0.001
AK017022_1(AK017022|pid:none) Mus musculus adult male testis cDN... 47 0.001
FB854217_1(FB854217|pid:none) Sequence 73490 from Patent WO20080... 47 0.001
(P0C1H6) RecName: Full=Histone H2B type F-M; AltName: Full=H2B.s... 47 0.001
(Q00728) RecName: Full=Histone H2A type 4; AltName: Full=Histone... 46 0.001
(A3LZZ0) RecName: Full=Histone H2A.1; &CP000502_101(CP000502|pi... 46 0.001
(A3LXE7) RecName: Full=Histone H2A.2; &CP000500_276(CP000500|pi... 46 0.001
(A5DBG4) RecName: Full=Histone H2A.1; 46 0.001
CU928171_698(CU928171|pid:none) Kluyveromyces thermotolerans str... 46 0.001
(Q6BRG3) RecName: Full=Histone H2A.2; &CR382136_721(CR382136|pi... 46 0.001
(Q6BKW8) RecName: Full=Histone H2A.1; &CR382138_802(CR382138|pi... 46 0.001
EU973825_1(EU973825|pid:none) Zea mays clone 418854 histone H2B.... 46 0.001
AK078464_1(AK078464|pid:none) Mus musculus 12 days embryo male w... 46 0.002
AM774338_2(AM774338|pid:none) Reporter vector pYH2A. 46 0.002
(Q9P0M6) RecName: Full=Core histone macro-H2A.2; Short=... 46 0.002
(Q9C681) RecName: Full=Probable histone H2A.1; AltName: Full=HTA... 46 0.002
AK020744_1(AK020744|pid:none) Mus musculus adult male spinal cor... 46 0.002
BC116136_1(BC116136|pid:none) Bos taurus H2A histone family, mem... 46 0.002
AC154391_20(AC154391|pid:none) Medicago truncatula chromosome 7 ... 46 0.002
BT085490_1(BT085490|pid:none) Zea mays full-length cDNA clone ZM... 46 0.002
EU959558_1(EU959558|pid:none) Zea mays clone 218580 histone H2A ... 45 0.002
AX885421_1(AX885421|pid:none) Sequence 1284 from Patent EP1033401. 45 0.002
BC125248_1(BC125248|pid:none) Mus musculus histone cluster 1, H2... 45 0.002
JH0303(JH0303) histone H2A.1 - mouse &M33988_1(M33988|pid:none) 45 0.002
(Q64598) RecName: Full=Histone H2A type 1-F; &HSRT2A(S26186;A02... 45 0.002
FB854177_1(FB854177|pid:none) Sequence 73450 from Patent WO20080... 45 0.002
AJ494849_1(AJ494849|pid:none) Oikopleura dioica H2A.3 gene for h... 45 0.002
(Q8CGP5) RecName: Full=Histone H2A type 1-F; &AY158916_1(AY1589... 45 0.002
CU928173_408(CU928173|pid:none) Zygosaccharomyces rouxii strain ... 45 0.002
BT038313_1(BT038313|pid:none) Zea mays full-length cDNA clone ZM... 45 0.003
FN357686_6(FN357686|pid:none) Schistosoma mansoni genome sequenc... 45 0.003
(A5DXS8) RecName: Full=Histone H2A.2; 45 0.003
BC115314_1(BC115314|pid:none) Danio rerio zgc:136891, mRNA (cDNA... 45 0.003
AK312127_1(AK312127|pid:none) Homo sapiens cDNA, FLJ92409, highl... 45 0.003
EU952971_1(EU952971|pid:none) Zea mays clone 1372232 histone H2A... 45 0.003
(Q6FM31) RecName: Full=Histone H2A.2; &CR380957_486(CR380957|pi... 45 0.003
FB854135_1(FB854135|pid:none) Sequence 73408 from Patent WO20080... 45 0.003
FB854165_1(FB854165|pid:none) Sequence 73438 from Patent WO20080... 45 0.004
(O04848) RecName: Full=Probable histone H2AXa; AltName: Full=HTA... 44 0.005
(P0C170) RecName: Full=Histone H2A type 1-E; 44 0.005
(P09589) RecName: Full=Histone H2A, sperm; Flags: Fragment; &HS... 44 0.005
X00089_1(X00089|pid:none) Human histone H2a gene. 44 0.005
AK312124_1(AK312124|pid:none) Homo sapiens cDNA, FLJ92406, highl... 44 0.005
AY894000_1(AY894000|pid:none) Synthetic construct Homo sapiens c... 44 0.005
HSXLA2(I24510)histone H2A.2 - African clawed frog 44 0.005
AY087924_1(AY087924|pid:none) Arabidopsis thaliana clone 39667 m... 44 0.005
CR762147_1(CR762147|pid:none) Xenopus tropicalis finished cDNA, ... 44 0.005
(O81826) RecName: Full=Probable histone H2A.3; AltName: Full=HTA... 44 0.005
(A9UMV8) RecName: Full=Histone H2A.J; Short=H2a/j; &(Q... 44 0.005
FB854193_1(FB854193|pid:none) Sequence 73466 from Patent WO20080... 44 0.005
(P0C169) RecName: Full=Histone H2A type 1-C; &(Q93077) RecName:... 44 0.005
(P02275) RecName: Full=Histone H2A.1; AltName: Full=wcH2A-9; &D... 44 0.007
BC150451_1(BC150451|pid:none) Danio rerio guanine nucleotide bin... 44 0.007
(P13912) RecName: Full=Histone H2A; &I50457(I50457) &X14730_1(X... 44 0.007
(Q3ZBX9) RecName: Full=Histone H2A.J; Short=H2a/j; &(Q... 44 0.007
AY389710_1(AY389710|pid:none) Hyacinthus orientalis histone H2A ... 44 0.007
AF013803_1(AF013803|pid:none) Pinus taeda H2A homolog (lp15) gen... 44 0.007
CR457079_1(CR457079|pid:none) Homo sapiens full open reading fra... 44 0.007
HSWT91(A02602)histone H2A.1 - wheat 44 0.007
(P06897) RecName: Full=Histone H2A type 1; &BC106331_1(BC106331... 44 0.007
AK303301_1(AK303301|pid:none) Homo sapiens cDNA FLJ52230 complet... 44 0.007
BC077427_1(BC077427|pid:none) Xenopus laevis MGC82198 protein, m... 44 0.007
(P02263) RecName: Full=Histone H2A-IV; &D11055_1(D11055|pid:non... 44 0.007
BC158988_1(BC158988|pid:none) Xenopus tropicalis hypothetical pr... 44 0.007
(A2Y5G8) RecName: Full=Probable histone H2A.4; &(Q6L500) RecNam... 44 0.007
BC074601_1(BC074601|pid:none) Xenopus tropicalis MGC69325 protei... 44 0.007
(Q4R3X5) RecName: Full=Histone H2A.J; Short=H2a/j; &AB... 44 0.007
BT037288_1(BT037288|pid:none) Zea mays full-length cDNA clone ZM... 44 0.009
HSHUA5(B26318)histone H2A.5 - human 44 0.009
BT039245_1(BT039245|pid:none) Zea mays full-length cDNA clone ZM... 44 0.009
FN317391_1(FN317391|pid:none) Schistosoma japonicum isolate Anhu... 44 0.009
AJ494854_1(AJ494854|pid:none) Oikopleura dioica partial mRNA for... 44 0.009
(A2YVE5) RecName: Full=Probable histone H2A.3; &(Q84NJ4) RecNam... 44 0.009
FN357712_11(FN357712|pid:none) Schistosoma mansoni genome sequen... 44 0.009
BT036844_1(BT036844|pid:none) Zea mays full-length cDNA clone ZM... 44 0.009
BC098891_1(BC098891|pid:none) Danio rerio zgc:114037, mRNA (cDNA... 44 0.009
M11085_1(M11085|pid:none) Sea urchin (P.miliaris) late histone H... 44 0.009
EU966276_1(EU966276|pid:none) Zea mays clone 293053 histone H2A ... 44 0.009
FN357295_62(FN357295|pid:none) Schistosoma mansoni genome sequen... 44 0.009
FB854249_1(FB854249|pid:none) Sequence 73522 from Patent WO20080... 44 0.009
BC134206_1(BC134206|pid:none) Danio rerio zgc:163047, mRNA (cDNA... 44 0.009
(P04736) RecName: Full=Late histone H2A.2.1; &A25077(A25077) &M... 44 0.009
BC129542_1(BC129542|pid:none) Xenopus laevis hypothetical protei... 44 0.009
HSUR9P(A37574;A02593)histone H2A, gonadal - sea urchin (Parechin... 44 0.009
CR954208_187(CR954208|pid:none) Ostreococcus tauri strain OTTH05... 44 0.009
FN315474_1(FN315474|pid:none) Schistosoma japonicum isolate Anhu... 44 0.009
(P04735) RecName: Full=Late histone H2A.1; &M11084_1(M11084|pid... 44 0.009
BC072354_1(BC072354|pid:none) Xenopus laevis hypothetical protei... 44 0.009
AY223124_1(AY223124|pid:none) Schistosoma japonicum clone ZZD142... 43 0.012
(P40281) RecName: Full=Histone H2A.2; &FB854149_1(FB854149|pid:... 43 0.012
S45110(S45110) histone H2A - mouse &Z30940_1(Z30940|pid:none) 43 0.012
EU952344_1(EU952344|pid:none) Zea mays clone 1278117 histone H2A... 43 0.012
EF677589_1(EF677589|pid:none) Picea sitchensis clone WS02771_F05... 43 0.012
(A1A4R1) RecName: Full=Histone H2A type 2-C; &(Q16777) RecName:... 43 0.012
CR848416_1(CR848416|pid:none) Xenopus tropicalis finished cDNA, ... 43 0.012
EF677259_1(EF677259|pid:none) Picea sitchensis clone WS02764_F11... 43 0.012
FB854253_1(FB854253|pid:none) Sequence 73526 from Patent WO20080... 43 0.012
BC169194_1(BC169194|pid:none) Danio rerio cDNA clone MGC:195633 ... 43 0.012
EU142255_1(EU142255|pid:none) Artemia franciscana histone H2A mR... 43 0.012
HSTR21(A92959;A92139;A92107;A02592;A23220)histone H2A, gonadal -... 43 0.012
FM992690_368(FM992690|pid:none) Candida dubliniensis CD36 chromo... 43 0.012
(Q59VP2) RecName: Full=Histone H2A.2; &FM992688_388(FM992688|pi... 43 0.012
EF081579_1(EF081579|pid:none) Picea sitchensis clone WS02716_G21... 43 0.012
EU957906_1(EU957906|pid:none) Zea mays clone 1632149 histone H2A... 43 0.012
(P35062) RecName: Full=Histone H2A-III; &D11054_1(D11054|pid:no... 43 0.012
BC089240_1(BC089240|pid:none) Xenopus tropicalis H2A histone fam... 43 0.012
(Q59SU5) RecName: Full=Histone H2A.1; 43 0.012
EF087791_1(EF087791|pid:none) Picea sitchensis clone WS02750_P03... 43 0.012
(P02264) RecName: Full=Histone H2A; &X01064_1(X01064|pid:none) 43 0.012
EU957929_1(EU957929|pid:none) Zea mays clone 1633885 histone H2A... 43 0.012
EF084773_1(EF084773|pid:none) Picea sitchensis clone WS02812_A17... 43 0.012
(Q8IUE6) RecName: Full=Histone H2A type 2-B; &AL591493_16(AL591... 43 0.012
AJ494852_1(AJ494852|pid:none) Oikopleura dioica partial H2A.4 ge... 43 0.015
T20119(T20119) hypothetical protein C50F4.13 - Caenorhabditis el... 43 0.015
(Q96QV6) RecName: Full=Histone H2A type 1-A; AltName: Full=H2A/r... 43 0.015
BC074176_1(BC074176|pid:none) Xenopus laevis MGC81997 protein, m... 43 0.015
(P40280) RecName: Full=Histone H2A; &FB854159_1(FB854159|pid:no... 43 0.015
EF086604_1(EF086604|pid:none) Picea sitchensis clone WS02748_K18... 43 0.015
(P09588) RecName: Full=Histone H2A; &AC024696_5(AC024696|pid:no... 43 0.015
(P84051) RecName: Full=Histone H2A; &(P84052) RecName: Fu &(P84... 43 0.015
(P02276) RecName: Full=Histone H2A.2.1; &HSWT2A(S00623;A02603) 43 0.015
HSSF2(A02596)histone H2A - starfish (Asterias rubens) 42 0.020
FB854237_1(FB854237|pid:none) Sequence 73510 from Patent WO20080... 42 0.020
BC073272_1(BC073272|pid:none) Xenopus laevis MGC80637 protein, m... 42 0.020
BC076893_1(BC076893|pid:none) Xenopus tropicalis H2A histone, mR... 42 0.020
S59590(S59590) histone H2A (clone CH-IV) - Chlamydomonas reinhar... 42 0.020
(P50567) RecName: Full=Histone H2A; &L41841_4(L41841|pid:none) ... 42 0.020
AB480880_1(AB480880|pid:none) Bombyx mori H2A-L2 mRNA for histon... 42 0.020
CP001328_413(CP001328|pid:none) Micromonas sp. RCC299 chromosome... 42 0.020
(Q64522) RecName: Full=Histone H2A type 2-B; AltName: Full=H2a-6... 42 0.020
AY631392_1(AY631392|pid:none) Toxoplasma gondii histone H2AX gen... 42 0.026
AF058444_1(AF058444|pid:none) Gallus gallus truncated histone ma... 42 0.026
(P16866) RecName: Full=Histone H2A-IV; &JQ0796(JQ0796) &M31922_... 42 0.026
I80811(I80811)histone H2A.1 - rat 42 0.026
BC006955_1(BC006955|pid:none) Mus musculus H2A histone family, m... 42 0.026
(P16865) RecName: Full=Histone H2A-III; &JQ0794(JQ0794) &M31921... 42 0.026
BT038738_1(BT038738|pid:none) Zea mays full-length cDNA clone ZM... 42 0.026
AF054174_1(AF054174|pid:none) Homo sapiens histone macroH2A1.2 m... 42 0.026
AF044286_1(AF044286|pid:none) Homo sapiens histone macroH2A1.1 m... 42 0.026
AF041483_1(AF041483|pid:none) Homo sapiens histone macroH2A1.2 m... 42 0.026
AK023409_1(AK023409|pid:none) Homo sapiens cDNA FLJ13347 fis, cl... 42 0.026
AK039274_1(AK039274|pid:none) Mus musculus adult male spinal cor... 42 0.026
(Q02874) RecName: Full=Core histone macro-H2A.1; Short=... 42 0.026
M99065_1(M99065|pid:none) Rattus norvegicus histone H2A.1 mRNA, ... 42 0.026
CP000595_84(CP000595|pid:none) Ostreococcus lucimarinus CCE9901 ... 42 0.026
(Q43214) RecName: Full=Protein H2A.6; AltName: Full=wcH2A-3; &D... 42 0.034
DQ370422_1(DQ370422|pid:none) Gateway adapted binary vector pCGT... 42 0.034
AB001052_1(AB001052|pid:none) Bombyx mori mRNA for histone H2A-l... 42 0.034
(Q6PV61) RecName: Full=Histone H2A; 42 0.034
DQ370421_2(DQ370421|pid:none) Gateway adapted binary vector pFYT... 42 0.034
FB854171_1(FB854171|pid:none) Sequence 73444 from Patent WO20080... 42 0.034
FB854259_1(FB854259|pid:none) Sequence 73532 from Patent WO20080... 42 0.034
EU958801_1(EU958801|pid:none) Zea mays clone 207926 histone H2A ... 42 0.034
AY760064_1(AY760064|pid:none) Muntiacus muntjak vaginalis H2A hi... 42 0.034
(P16104) RecName: Full=Histone H2A.x; Short=H2a/x; &AB... 42 0.034
BT040640_1(BT040640|pid:none) Zea mays full-length cDNA clone ZM... 42 0.034
BT078019_1(BT078019|pid:none) Lepeophtheirus salmonis Pacific fo... 41 0.044
BT077570_1(BT077570|pid:none) Lepeophtheirus salmonis Pacific fo... 41 0.044
AB249650_2(AB249650|pid:none) Drosophila takahashii H4, H2A, H2B... 41 0.044
AJ238321_2(AJ238321|pid:none) Asellus aquaticus 5S rRNA gene, hi... 41 0.044
BT002503_1(BT002503|pid:none) Arabidopsis thaliana Unknown prote... 41 0.044
(A2WQG7) RecName: Full=Probable histone H2A.5; &(Q94E96) RecNam... 41 0.044
BT077498_1(BT077498|pid:none) Lepeophtheirus salmonis Pacific fo... 41 0.044
DQ418455_3(DQ418455|pid:none) Chlamys farreri core histone gene ... 41 0.044
CP000592_101(CP000592|pid:none) Ostreococcus lucimarinus CCE9901... 41 0.044
AE014134_3599(AE014134|pid:none) Drosophila melanogaster chromos... 41 0.044
EU215423_1(EU215423|pid:none) Anthonomus grandis histone H2A, hi... 41 0.044
EU853690_1(EU853690|pid:none) Adineta vaga histone H2A variant H... 41 0.058
>AF406555_1(AF406555|pid:none) Toxoplasma gondii histone H2B variant
1 mRNA, complete cds. &AM055943_205(AM055943|pid:none)
&FB334672_1(FB334672|pid:none)
Length = 123
Score = 81.6 bits (200), Expect = 3e-14
Identities = 38/86 (44%), Positives = 60/86 (69%)
Frame = +1
Query: 70 IYIKKLIKQINPACRIQVKSVQILTSLIRDTTISIMNEAFHLVQLSNKRTLSARDVQTSV 249
+YI K++KQ++P + KS+ I+ S I D + +EA L++ + KRTLS+R++QT+V
Sbjct: 36 LYIYKVLKQVHPETGVSKKSMSIMNSFINDIFDRLADEAVRLIRYNKKRTLSSREIQTAV 95
Query: 250 RLCTVGEISRHAVSEGVKRVTNFNSA 327
RL GE+S+HAVSEG K VT + ++
Sbjct: 96 RLLLPGELSKHAVSEGTKAVTKYTTS 121
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3236559
Number of Hits to DB: 1,125,848,243
Number of extensions: 19550372
Number of successful extensions: 37662
Number of sequences better than 10.0: 541
Number of HSP's gapped: 37657
Number of HSP's successfully gapped: 542
Length of query: 285
Length of database: 1,051,180,864
Length adjustment: 127
Effective length of query: 158
Effective length of database: 640,137,871
Effective search space: 101141783618
Effective search space used: 101141783618
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)
|
| PSORT |
|
| VS (DIR, S) |
2 |
| VH (FL, L) |
0 |
| VF (FL, S) |
0 |
| AH (FL, L) |
1 |
| AF (FL, S) |
0 |
| SL (DIR, L) |
0 |
| SS (DIR, S) |
1 |
| SH (FL, L) |
0 |
| SF (FL, S) |
0 |
| CH (FL, L) |
0 |
| CF (FL, S) |
0 |
| FCL (DIR, L) |
0 |
| FC (DIR, S) |
0 |
| FC-IC (SUB) |
0 |