Contig-U14071-1
Contig ID Contig-U14071-1
Contig update 2002.12.18
Contig sequence
>Contig-U14071-1 (Contig-U14071-1Q) /CSM_Contig/Contig-U14071-1Q.Seq.d
GTGGCGGTCCGCCCTTTTTTTTTTTTTATATACATCCTTCTTAAAACCAT
TTATTAAATTTAAAAAAAAAAAAAAAAAAAAAAAAAAAATTATCTATTTT
CAAAAAACTTTCAAAACTCAATAAAACTAAATAAAAGGAAATATATATTA
TAAACAAGATGCCTCTTAGAGAATTCAAAATCGTCGTTTTAGGTTCAGGT
GGTGTAGGTAAATCTGCTTTGACTGTGCAATTTGTTCAAGGTATTTTTGT
TGAAAAGTACGATCCAACCATCGAAGATTCCTACAGAAAACAAGTCGAAG
TTGATAGCAATCAATGCATGTTAGAAATTTTAGATACAGCTGGTACTGAA
CAATTTACTGCAATGAGAGATCTTTACATGAAAAATGGTCAAGGTTTTGT
TTTAGTATATTCAATCATTTCAAACTCCACTTTTAACGAGTTACCAGATC
TCCGTGAACAAATTCTCAGAGTTAAGGATTGTGAAGATGTTCCAATGGTT
CTTGTCGGTAACAAATGCGATCTCCACGACCAACGTGTTATTAGCACAGA
ACAAGGTGAAGAACTCGCTCGTAAATTTGGTGATTGTTACTTTTTAGAAG
CATCTGCCAAGAATAAAGTTAATGTTGAACAAATTTTCTATAACTTAATC
CGTCAAATCAACCGTAAAAACCCAGTTGGTCCACCAAGCAAAGCTAAATC
AAAATGTGCTTTATTGTAAACAATCCATCAACTCTCCAACACCCTTCCAT
ACTCACCCACCCATTTCAAATGTAACAATTGAAAAACAGAAAAAAAAAAA
AAAAAAAAACAGGAAAAAAAAAAAAAACACTTTTTTAAAAAAAAAAAAAA
AAATAATAATAATAATAATAATAACCAGTAATATAGTAAATATATATCGT
AAAGATACCAAAATATGTAATAAATAAATTTTTTTGTTTTTTTTTTAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA

Gap no gap
Contig length 982
Chromosome number (1..6, M) 6
Chromosome length 3595308
Start point 99510
End point 100453
Strand (PLUS/MINUS) PLUS
Number of clones 15
Number of EST 17
Link to clone list U14071
List of clone(s)

est1=SSE613Z,-26,659
est2=SSK314E,21,966
est3=SSE881Z,28,587
est4=SSH214F,31,380
est5=SSF811Z,141,795
est6=SSF893Z,146,792
est7=SSJ762Z,149,796
est8=SSC712F,183,849
est9=SSG189E,185,794
est10=SSA793Z,347,795
est11=AHH373F,365,799
est12=AHH373Z,365,788
est13=SSM845Z,483,840
est14=SSC472E,582,960
est15=VSA174E,582,946
est16=SSH214Z,758,973
est17=SSM450Z,795,983
Translated Amino Acid sequence
ggppffffyihps*nhllnlkkkkkkkkklsifkklsklnktk*KEIYIINKMPLREFKI
VVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSYRKQVEVDSNQCMLEILDTAGTEQFTA
MRDLYMKNGQGFVLVYSIISNSTFNELPDLREQILRVKDCEDVPMVLVGNKCDLHDQRVI
STEQGEELARKFGDCYFLEASAKNKVNVEQIFYNLIRQINRKNPVGPPSKAKSKCALL*t
ihqlsntlpyspthfkcnn*ktekkkkkkqekkkkhffkkkkknnnnnnnnq*yskyis*
ryqnm**inffvfflkkkkkkkkkkk


Translated Amino Acid sequence (All Frames)
Frame A:
vavrpffffiyillktiy*i*kkkkkkkknylfsknfqnsiklnkrkyil*trcllensk
ssf*vqvv*vnll*lcnlfkvfllkstiqpskiptenkskliainac*kf*iqlvlnnll
q*eift*kmvkvlf*yiqsfqtplltsyqisvnkfselrivkmfqwflsvtnaisttnvl
laqnkvknslvnlvivtf*khlpriklmlnkfsit*svkstvktqlvhqaklnqnvlyck
qsinsptpfhthppisnvtiekqkkkkkknrkkkkntflkkkkkiiiiiiitsnivniyr
kdtkicnk*iflfff*kkkkkkkkkkk


Frame B:
wrsalffflytsflkpfikfkkkkkkkkkiiyfqktfktq*n*ikgniyykqdas*riqn
rrfrfrwcr*icfdcaicsryfc*kvrsnhrrflqktsrs**qsmhvrnfryswy*tiyc
nerslhekwsrfcfsifnhfklhf*rvtrsp*tnsqs*gl*rcsngscr*qmrsprptcy
*hrtr*rtrs*iw*lllfrsicqe*s*c*tnfl*lnpsnqp*kpswstkqs*ikmcfivn
npstlqhpsilthpfqm*qlknrkkkkkktgkkkktlf*kkkkk*******pvi**iyiv
kipkyvinkffcfffkkkkkkkkkkkk


Frame C:
ggppffffyihps*nhllnlkkkkkkkkklsifkklsklnktk*KEIYIINKMPLREFKI
VVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSYRKQVEVDSNQCMLEILDTAGTEQFTA
MRDLYMKNGQGFVLVYSIISNSTFNELPDLREQILRVKDCEDVPMVLVGNKCDLHDQRVI
STEQGEELARKFGDCYFLEASAKNKVNVEQIFYNLIRQINRKNPVGPPSKAKSKCALL*t
ihqlsntlpyspthfkcnn*ktekkkkkkqekkkkhffkkkkknnnnnnnnq*yskyis*
ryqnm**inffvfflkkkkkkkkkkk


own update 2004. 6.10
Homology vs CSM-cDNA
Query= Contig-U14071-1 (Contig-U14071-1Q)
/CSM_Contig/Contig-U14071-1Q.Seq.d
(982 letters)

Database: CSM
6905 sequences; 5,674,871 total letters


Score E
Sequences producing significant alignments: (bits) Value

Contig-U14071-1 (Contig-U14071-1Q) /CSM_Contig/Conti... 1269 0.0
Contig-U12458-1 (Contig-U12458-1Q) /CSM_Contig/Conti... 36 0.069
Contig-U14351-1 (Contig-U14351-1Q) /CSM_Contig/Conti... 34 0.27
Contig-U11866-1 (Contig-U11866-1Q) /CSM_Contig/Conti... 34 0.27
Contig-U11145-1 (Contig-U11145-1Q) /CSM_Contig/Conti... 34 0.27
Contig-U03529-1 (Contig-U03529-1Q) /CSM_Contig/Conti... 34 0.27
Contig-U01917-1 (Contig-U01917-1Q) /CSM_Contig/Conti... 34 0.27
Contig-U14838-1 (Contig-U14838-1Q) /CSM_Contig/Conti... 32 1.1
Contig-U14029-1 (Contig-U14029-1Q) /CSM_Contig/Conti... 32 1.1
Contig-U12277-1 (Contig-U12277-1Q) /CSM_Contig/Conti... 32 1.1

>Contig-U14071-1 (Contig-U14071-1Q) /CSM_Contig/Contig-U14071-1Q.Seq.d
Length = 982

Score = 1269 bits (640), Expect = 0.0
Identities = 640/640 (100%)
Strand = Plus / Plus


Query: 142 tatatattataaacaagatgcctcttagagaattcaaaatcgtcgttttaggttcaggtg 201
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 142 tatatattataaacaagatgcctcttagagaattcaaaatcgtcgttttaggttcaggtg 201


Query: 202 gtgtaggtaaatctgctttgactgtgcaatttgttcaaggtatttttgttgaaaagtacg 261
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 202 gtgtaggtaaatctgctttgactgtgcaatttgttcaaggtatttttgttgaaaagtacg 261


Query: 262 atccaaccatcgaagattcctacagaaaacaagtcgaagttgatagcaatcaatgcatgt 321
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 atccaaccatcgaagattcctacagaaaacaagtcgaagttgatagcaatcaatgcatgt 321


Query: 322 tagaaattttagatacagctggtactgaacaatttactgcaatgagagatctttacatga 381
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 tagaaattttagatacagctggtactgaacaatttactgcaatgagagatctttacatga 381


Query: 382 aaaatggtcaaggttttgttttagtatattcaatcatttcaaactccacttttaacgagt 441
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 aaaatggtcaaggttttgttttagtatattcaatcatttcaaactccacttttaacgagt 441


Query: 442 taccagatctccgtgaacaaattctcagagttaaggattgtgaagatgttccaatggttc 501
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 taccagatctccgtgaacaaattctcagagttaaggattgtgaagatgttccaatggttc 501


Query: 502 ttgtcggtaacaaatgcgatctccacgaccaacgtgttattagcacagaacaaggtgaag 561
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 502 ttgtcggtaacaaatgcgatctccacgaccaacgtgttattagcacagaacaaggtgaag 561


Query: 562 aactcgctcgtaaatttggtgattgttactttttagaagcatctgccaagaataaagtta 621
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 562 aactcgctcgtaaatttggtgattgttactttttagaagcatctgccaagaataaagtta 621


Query: 622 atgttgaacaaattttctataacttaatccgtcaaatcaaccgtaaaaacccagttggtc 681
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 622 atgttgaacaaattttctataacttaatccgtcaaatcaaccgtaaaaacccagttggtc 681


Query: 682 caccaagcaaagctaaatcaaaatgtgctttattgtaaacaatccatcaactctccaaca 741
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 682 caccaagcaaagctaaatcaaaatgtgctttattgtaaacaatccatcaactctccaaca 741


Query: 742 cccttccatactcacccacccatttcaaatgtaacaattg 781
||||||||||||||||||||||||||||||||||||||||
Sbjct: 742 cccttccatactcacccacccatttcaaatgtaacaattg 781


Score = 67.9 bits (34), Expect = 2e-11
Identities = 34/34 (100%)
Strand = Plus / Plus


Query: 28 atatacatccttcttaaaaccatttattaaattt 61
||||||||||||||||||||||||||||||||||
Sbjct: 28 atatacatccttcttaaaaccatttattaaattt 61


Score = 63.9 bits (32), Expect = 3e-10
Identities = 32/32 (100%)
Strand = Plus / Plus


Query: 897 tcgtaaagataccaaaatatgtaataaataaa 928
||||||||||||||||||||||||||||||||
Sbjct: 897 tcgtaaagataccaaaatatgtaataaataaa 928


>Contig-U12458-1 (Contig-U12458-1Q) /CSM_Contig/Contig-U12458-1Q.Seq.d
Length = 1247

Score = 36.2 bits (18), Expect = 0.069
Identities = 18/18 (100%)
Strand = Plus / Minus


Query: 612 aataaagttaatgttgaa 629
||||||||||||||||||
Sbjct: 88 aataaagttaatgttgaa 71


>Contig-U14351-1 (Contig-U14351-1Q) /CSM_Contig/Contig-U14351-1Q.Seq.d
Length = 862

Score = 34.2 bits (17), Expect = 0.27
Identities = 17/17 (100%)
Strand = Plus / Plus


Query: 587 ttactttttagaagcat 603
|||||||||||||||||
Sbjct: 646 ttactttttagaagcat 662


Database: CSM
Posted date: Jun 9, 2004 7:35 PM
Number of letters in database: 5,674,871
Number of sequences in database: 6905

Lambda K H
1.37 0.711 1.31

Gapped
Lambda K H
1.37 0.711 1.31


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6624
Number of Sequences: 6905
Number of extensions: 6624
Number of successful extensions: 592
Number of sequences better than 10.0: 49
length of query: 982
length of database: 5,674,871
effective HSP length: 16
effective length of query: 966
effective length of database: 5,564,391
effective search space: 5375201706
effective search space used: 5375201706
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 15 (30.2 bits)
dna update 2008.12.17
Homology vs DNA
Query= Contig-U14071-1 (Contig-U14071-1Q) /CSM_Contig/Contig-U14071-1Q.Seq.d
(982 letters)

Database: ddbj_A
92,845,959 sequences; 95,242,211,685 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value N

(C92670) Dictyostelium discoideum slug cDNA, clone SSF811. 1233 0.0 1
(X54291) Dictyostelium discoideum rap1 gene for ras-related ... 1231 0.0 1
(C92714) Dictyostelium discoideum slug cDNA, clone SSF893. 1217 0.0 1
(C89815) Dictyostelium discoideum slug cDNA, clone SSG189. 1176 0.0 1
(C91168) Dictyostelium discoideum slug cDNA, clone SSJ762. 1156 0.0 1
(L09750) Dictyostelium discoideum rap1 gene, 3' end exon 1. 872 0.0 3
(C92471) Dictyostelium discoideum slug cDNA, clone SSE613. 975 0.0 3
(C92414) Dictyostelium discoideum slug cDNA, clone SSE881. 829 0.0 2
(AU037041) Dictyostelium discoideum slug cDNA, clone SSA793. 848 0.0 1
(BJ334273) Dictyostelium discoideum cDNA clone:dda45b19, 5' ... 819 0.0 1
(BJ352133) Dictyostelium discoideum cDNA clone:dda45b19, 3' ... 815 0.0 1
(C91466) Dictyostelium discoideum slug cDNA, clone SSK314. 595 0.0 2
(C93224) Dictyostelium discoideum slug cDNA, clone SSM845. 585 e-162 1
(AU071901) Dictyostelium discoideum slug cDNA, clone SSC712. 468 e-127 1
(AU261328) Dictyostelium discoideum vegetative cDNA clone:VS... 396 e-106 1
(AU051954) Dictyostelium discoideum slug cDNA, clone SSC472. 270 5e-70 2
(AU073442) Dictyostelium discoideum slug cDNA, clone SSH214. 228 3e-66 2
(AU074306) Dictyostelium discoideum slug cDNA, clone SSK314. 208 3e-49 1
(CX789018) Sa_mx0_73a04_SP6 Dogfish Shark Multiple Tissues, ... 119 3e-46 2
(EH016097) USDA-FP_188632 Lysiphlebus testaceipes adult whol... 129 1e-42 3
(EH012870) USDA-FP_182173 Lysiphlebus testaceipes adult whol... 129 1e-42 3
(EH011398) USDA-FP_184401 Lysiphlebus testaceipes adult whol... 129 1e-42 3
(EG018003) EST00514_0906 Sporophyte cDNA Library Porphyra ha... 145 5e-41 4
(EE009983) ROE00001391 Rhizopus oryzae Company Rhizopus oryz... 176 1e-39 1
(EE006021) ROE00011676 Rhizopus oryzae Company Rhizopus oryz... 176 1e-39 1
(FC791874) CBGC21260.fwd CBGC Lottia gigantea 15h 18h embryo... 131 3e-37 3
(FC791873) CBGC21260.rev CBGC Lottia gigantea 15h 18h embryo... 131 3e-37 3
(FC600336) CAXS12830.rev CAXS Lottia gigantea from head, foo... 131 3e-37 3
(FC603076) CAXS14483.rev CAXS Lottia gigantea from head, foo... 131 4e-37 3
(FC700450) CAXX8315.fwd CAXX Lottia gigantea from male gonad... 131 5e-37 3
(ES565900) TPAF-aab77g10.g1 T.spiralis_EST Trichinella spira... 90 7e-34 2
(FC807126) CBGC8757.rev CBGC Lottia gigantea 15h 18h embryos... 131 1e-32 2
(FC807127) CBGC8757.fwd CBGC Lottia gigantea 15h 18h embryos... 131 1e-32 2
(CN062019) Ag2_p35_D5_M13R AG Ambystoma tigrinum tigrinum cD... 90 4e-32 2
(CO792598) NT015C_B06 St18-22 Neural tube (NT) Ambystoma mex... 90 4e-32 2
(AJ719603) Gallus gallus mRNA for hypothetical protein, clon... 84 6e-31 2
(CV862745) gonad_EST10221 Embryonic gonad cDNA Library Gallu... 84 7e-31 2
(CO765797) spleen_EST01523 Spleen cDNA Library Gallus gallus... 84 7e-31 2
(CV856543) gonad_EST04019 Embryonic gonad cDNA Library Gallu... 84 7e-31 2
(BU133788) 603121707F1 CSEQCHL22 Gallus gallus cDNA clone Ch... 84 7e-31 2
(CV858056) gonad_EST05532 Embryonic gonad cDNA Library Gallu... 84 7e-31 2
(BU409115) 603159357F1 CSEQRBL03 Gallus gallus cDNA clone Ch... 84 7e-31 2
(BU127754) 603113172F1 CSEQCHL20 Gallus gallus cDNA clone Ch... 84 7e-31 2
(DR430130) nax26d02.y1 Chicken eye (embryo). Unnormalized (n... 84 7e-31 2
(AJ452861) Gallus gallus EST, clone library riken1, clone 32... 84 7e-31 2
(AJ721013) Gallus gallus mRNA for hypothetical protein, clon... 84 7e-31 2
(BU364605) 603790494F1 CSEQCHN72 Gallus gallus cDNA clone Ch... 84 7e-31 2
(CN218178) RJA026A06.ab1 RJbrain Gallus gallus cDNA 5', mRNA... 84 7e-31 2
(BU131523) 603116901F1 CSEQCHL21 Gallus gallus cDNA clone Ch... 84 7e-31 2
(AJ731527) Gallus gallus EST, clone 4h13s8. 84 7e-31 2
(AJ448917) Gallus gallus EST, clone library riken1, clone 20... 84 7e-31 2
(AJ455048) Gallus gallus EST, clone library riken1, clone 4h... 84 7e-31 2
(CK607723) Controlb_I23 Unstimulated Chicken PBL Macrophage ... 84 7e-31 2
(CK614394) LPSe_O18 LPS stimulated Chicken PBL Macrophage Ga... 84 7e-31 2
(CK611123) IFNi_K21 Interferon Stimulated Chicken PBL Macrop... 84 7e-31 2
(FG753753) G1146P338FF18.T0 Anolis carolinensis pooled norma... 84 3e-30 2
(CK615128) LPSk_D04 LPS stimulated Chicken PBL Macrophage Ga... 84 3e-30 2
(FE411322) CBTU2351.fwd CBTU_Daphnia_pulex_Chosen_One_Librar... 141 9e-30 2
(FE398621) CBTS1518.fwd CBTS_Daphnia_pulex_Chosen_One_Librar... 141 9e-30 2
(FE417509) CBTW2621.fwd CBTW_Daphnia_pulex_Chosen_One_Librar... 141 1e-29 2
(FE369815) CBNP1249.fwd CBNP_Daphnia_pulex_Chosen_One_Librar... 141 1e-29 2
(FE345346) CBIB415.fwd CBIB_Daphnia_pulex_Chosen_One_Library... 141 1e-29 2
(AY605487) Xenopus laevis Rap 1A2 GTPase mRNA, complete cds. 92 3e-29 3
(DR446965) AR1038D06 A. gomesiana hemocytes normalized libra... 88 4e-29 2
(CK807299) AGENCOURT_19146001 NICHD_XGC_Te2 Xenopus laevis c... 92 5e-29 3
(CF284340) AGENCOURT_15206444 NICHD_XGC_Sp1 Xenopus laevis c... 92 7e-29 3
(CF284307) AGENCOURT_15206829 NICHD_XGC_Sp1 Xenopus laevis c... 92 7e-29 3
(EB646736) AGENCOURT_75472174 NICHD_XGC_thy Xenopus laevis c... 92 7e-29 3
(EB645396) AGENCOURT_75471622 NICHD_XGC_thy Xenopus laevis c... 92 8e-29 3
(U15594) Physarum polycephalum proPprap1 protein (Pprap1) mR... 92 1e-28 4
(DA551279) Homo sapiens cDNA clone HCHON2000413, 5' end, mRN... 90 1e-28 3
(DB116137) Homo sapiens cDNA clone THYMU2022230, 5' end, mRN... 90 1e-28 3
(DB106610) Homo sapiens cDNA clone THYMU2008026, 5' end, mRN... 90 1e-28 3
(DA617863) Homo sapiens cDNA clone IMR322017676, 5' end, mRN... 90 1e-28 3
(BP247772) Homo sapiens cDNA clone: HKR09287, Sugano cDNA li... 98 1e-28 3
(BC073286) Xenopus laevis hypothetical protein MGC80662, mRN... 92 2e-28 2
(DR766153) duckAP26_6D5 Duck spleen ZAP Express cDNA Library... 84 2e-28 2
(DR765323) duckAP26_27F12 Duck spleen ZAP Express cDNA Libra... 84 2e-28 2
(CK301407) SB02012A1F01.f1 normalized Keck-Tagu Library SB02... 84 2e-28 2
(BJ925882) Daphnia magna cDNA, clone:IGU001_0003_E07.f, 5' e... 131 2e-28 2
(DA951106) Homo sapiens cDNA clone SPLEN2028324, 5' end, mRN... 90 5e-28 3
(DB020414) Homo sapiens cDNA clone TESTI2000599, 5' end, mRN... 94 2e-27 3
(FE304020) CANP441.fwd CANP_Daphnia_pulex_Log50_Library_2 Da... 133 2e-27 2
(FE287622) CANH4339.rev CANH_Daphnia_pulex_Log50_Library_21 ... 133 2e-27 2
(FE287623) CANH4339.fwd CANH_Daphnia_pulex_Log50_Library_21 ... 133 2e-27 2
(CO386397) AGENCOURT_26188283 Blumberg_Cho dorsal blastopore... 92 2e-27 2
(FE423417) CBTX4019.fwd CBTX_Daphnia_pulex_Chosen_One_Librar... 133 2e-27 2
(FF336083) 280461289 Pea aphid whole body normalized full le... 82 2e-27 2
(FE374865) CBNP4497.fwd CBNP_Daphnia_pulex_Chosen_One_Librar... 133 2e-27 2
(FE328445) CANY3444.fwd CANY_Daphnia_pulex_Log50_Library_20 ... 133 2e-27 2
(FE385693) CBNT4015.fwd CBNT_Daphnia_pulex_Chosen_One_Librar... 133 2e-27 2
(FF329066) 280438225 Pea aphid whole body normalized full le... 82 3e-27 2
(FF316883) 280383587 Pea aphid whole body normalized full le... 82 3e-27 2
(AL873186) Xenopus tropicalis EST, clone TEgg121e16 5'. 92 3e-27 3
(FE382871) CBNT1953.fwd CBNT_Daphnia_pulex_Chosen_One_Librar... 133 3e-27 2
(FE378039) CBNS3040.fwd CBNS_Daphnia_pulex_Chosen_One_Librar... 133 3e-27 2
(AL866920) Xenopus tropicalis EST, clone TEgg121e15 5'. 92 3e-27 3
(AL864387) Xenopus tropicalis EST, clone TEgg114f09 5'. 92 3e-27 3
(FE377365) CBNS2617.fwd CBNS_Daphnia_pulex_Chosen_One_Librar... 133 3e-27 2
(FF292424) 279283556 Pea aphid whole body normalized full le... 82 3e-27 2

>(C92670) Dictyostelium discoideum slug cDNA, clone SSF811.
Length = 652

Score = 1233 bits (622), Expect = 0.0
Identities = 625/626 (99%)
Strand = Plus / Plus


Query: 156 aagatgcctcttagagaattcaaaatcgtcgttttaggttcaggtggtgtaggtaaatct 215
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16 aagatgcctcttagagaattcaaaatcgtcgttttaggttcaggtggtgtaggtaaatct 75


Query: 216 gctttgactgtgcaatttgttcaaggtatttttgttgaaaagtacgatccaaccatcgaa 275
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 76 gctttgactgtgcaatttgttcaaggtatttttgttgaaaagtacgatccaaccatcgaa 135


Query: 276 gattcctacagaaaacaagtcgaagttgatagcaatcaatgcatgttagaaattttagat 335
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 136 gattcctacagaaaacaagtcgaagttgatagcaatcaatgcatgttagaaattttagat 195


Query: 336 acagctggtactgaacaatttactgcaatgagagatctttacatgaaaaatggtcaaggt 395
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 196 acagctggtactgaacaatttactgcaatgagagatctttacatgaaaaatggtcaaggt 255


Query: 396 tttgttttagtatattcaatcatttcaaactccacttttaacgagttaccagatctccgt 455
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 256 tttgttttagtatattcaatcatttcaaactccacttttaacgagttaccagatctccgt 315


Query: 456 gaacaaattctcagagttaaggattgtgaagatgttccaatggttcttgtcggtaacaaa 515
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 316 gaacaaattctcagagttaaggattgtgaagatgttccaatggttcttgttggtaacaaa 375


Query: 516 tgcgatctccacgaccaacgtgttattagcacagaacaaggtgaagaactcgctcgtaaa 575
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 376 tgcgatctccacgaccaacgtgttattagcacagaacaaggtgaagaactcgctcgtaaa 435


Query: 576 tttggtgattgttactttttagaagcatctgccaagaataaagttaatgttgaacaaatt 635
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 436 tttggtgattgttactttttagaagcatctgccaagaataaagttaatgttgaacaaatt 495


Query: 636 ttctataacttaatccgtcaaatcaaccgtaaaaacccagttggtccaccaagcaaagct 695
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 496 ttctataacttaatccgtcaaatcaaccgtaaaaacccagttggtccaccaagcaaagct 555


Query: 696 aaatcaaaatgtgctttattgtaaacaatccatcaactctccaacacccttccatactca 755
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 556 aaatcaaaatgtgctttattgtaaacaatccatcaactctccaacacccttccatactca 615


Query: 756 cccacccatttcaaatgtaacaattg 781
||||||||||||||||||||||||||
Sbjct: 616 cccacccatttcaaatgtaacaattg 641

Lambda K H
1.37 0.711 1.31

Matrix: blastn matrix:1 -3
Number of Sequences: 92845959
Number of Hits to DB: 725,981,209
Number of extensions: 41104817
Number of successful extensions: 3101182
Number of sequences better than 10.0: 3425
Length of query: 982
Length of database: 95,242,211,685
Length adjustment: 24
Effective length of query: 958
Effective length of database: 97,308,875,965
Effective search space: 93221903174470
Effective search space used: 93221903174470
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)

protein update 2009. 7. 9
Homology vs Protein
Query= Contig-U14071-1 (Contig-U14071-1Q) /CSM_Contig/Contig-U14071-1Q.Seq.d
(982 letters)

Database: nrp_B
3,236,559 sequences; 1,051,180,864 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value

(P18613) RecName: Full=Ras-related protein rapA; AltName: Full=R... 372 e-102
(Q94694) RecName: Full=Ras-related protein Rap-1; AltName: Full=... 324 2e-87
AF000653_1(AF000653|pid:none) Physarum polycephalum Pprap1 prote... 316 7e-85
BT079893_1(BT079893|pid:none) Esox lucius clone eluc-evq-521-111... 293 8e-78
BT050090_1(BT050090|pid:none) Salmo salar clone ssal-evd-558-184... 293 8e-78
BT078769_1(BT078769|pid:none) Esox lucius clone eluc-evq-539-166... 292 1e-77
CR859758_1(CR859758|pid:none) Pongo abelii mRNA; cDNA DKFZp469L0... 292 1e-77
BC095467_1(BC095467|pid:none) Homo sapiens RAP1B, member of RAS ... 291 2e-77
(Q6TEN1) RecName: Full=Ras-related protein Rap-1b; Flags: Precur... 291 2e-77
BC078173_1(BC078173|pid:none) Homo sapiens RAP1B, member of RAS ... 291 2e-77
AY888364_1(AY888364|pid:none) Synthetic construct Homo sapiens c... 291 2e-77
BT075730_1(BT075730|pid:none) Osmerus mordax clone omor-eva-506-... 290 4e-77
(P62833) RecName: Full=Ras-related protein Rap-1A; AltName: Full... 290 5e-77
BT082381_1(BT082381|pid:none) Anoplopoma fimbria clone afim-evh-... 290 5e-77
BT046913_1(BT046913|pid:none) Salmo salar clone ssal-evd-523-272... 290 7e-77
BT056846_1(BT056846|pid:none) Salmo salar clone ssal-rgb2-504-23... 289 1e-76
EU359270_1(EU359270|pid:none) Mus musculus Rap1A-retro1 mRNA, co... 288 2e-76
BX649534_4(BX649534|pid:none) Zebrafish DNA sequence from clone ... 288 2e-76
AY888366_1(AY888366|pid:none) Synthetic construct Homo sapiens c... 288 3e-76
AY605487_1(AY605487|pid:none) Xenopus laevis Rap 1A2 GTPase mRNA... 288 3e-76
AK030897_1(AK030897|pid:none) Mus musculus adult male thymus cDN... 287 3e-76
DQ213796_1(DQ213796|pid:none) Taeniopygia guttata clone 0061P000... 286 1e-75
EU359271_1(EU359271|pid:none) Mus musculus Rap1A-retro2 mRNA, co... 286 1e-75
BT056685_1(BT056685|pid:none) Salmo salar clone ssal-eve-523-364... 283 6e-75
BT076654_1(BT076654|pid:none) Caligus rogercresseyi clone crog-e... 276 6e-73
BT077285_1(BT077285|pid:none) Caligus rogercresseyi clone crog-e... 276 6e-73
U07795_1(U07795|pid:none) Rattus norvegicus Rap1B mRNA, complete... 276 8e-73
(P08645) RecName: Full=Ras-like protein 3; AltName: Full=Protein... 273 7e-72
AB170011_1(AB170011|pid:none) Bombyx mori ras3 mRNA for ras prot... 271 2e-71
AB076899_1(AB076899|pid:none) Ciona intestinalis Ci-rap1b mRNA f... 269 9e-71
FN315383_1(FN315383|pid:none) Schistosoma japonicum isolate Anhu... 268 2e-70
DQ138746_1(DQ138746|pid:none) Drosophila melanogaster strain Ral... 259 8e-68
FN357380_20(FN357380|pid:none) Schistosoma mansoni genome sequen... 257 4e-67
AK298818_1(AK298818|pid:none) Homo sapiens cDNA FLJ51696 complet... 248 2e-64
AF279894_1(AF279894|pid:none) Homo sapiens PNAS-140 mRNA, partia... 235 2e-60
BT057340_1(BT057340|pid:none) Salmo salar clone ssal-evd-510-237... 231 4e-59
U01052_1(U01052|pid:none) Entamoeba histolytica HM-1:IMSS rap ho... 229 1e-58
U01051_1(U01051|pid:none) Entamoeba histolytica HM-1:IMSS rap ho... 228 2e-58
BT075649_1(BT075649|pid:none) Osmerus mordax clone omor-eva-513-... 220 5e-56
FM992695_186(FM992695|pid:none) Candida dubliniensis CD36 chromo... 218 2e-55
(P61225) RecName: Full=Ras-related protein Rap-2b; Flags: Precur... 216 1e-54
AY892932_1(AY892932|pid:none) Synthetic construct Homo sapiens c... 216 1e-54
BT076868_1(BT076868|pid:none) Caligus rogercresseyi clone crog-e... 216 1e-54
TVHUR2(A33121;A36039) transforming protein rap2b - human &X5298... 216 1e-54
(P10114) RecName: Full=Ras-related protein Rap-2a; AltName: Full... 215 2e-54
FJ943988_1(FJ943988|pid:none) Ovis aries RAP2A mRNA, complete cds. 215 2e-54
BC054999_1(BC054999|pid:none) Danio rerio RAP2B, member of RAS o... 214 3e-54
BC157162_1(BC157162|pid:none) Xenopus tropicalis RAP2A, member o... 214 4e-54
DQ311403_1(DQ311403|pid:none) Bombyx mori ras-related protein 2 ... 214 5e-54
BC100221_1(BC100221|pid:none) Xenopus laevis hypothetical protei... 214 5e-54
(P03967) RecName: Full=Ras-like protein rasD; AltName: Full=Tran... 214 5e-54
CR859503_1(CR859503|pid:none) Pongo abelii mRNA; cDNA DKFZp459O0... 213 1e-53
(Q08DI5) RecName: Full=Ras-related protein Rap-2c; Flags: Precur... 213 1e-53
CR382135_786(CR382135|pid:none) Debaryomyces hansenii chromosome... 212 1e-53
BC161519_1(BC161519|pid:none) Xenopus tropicalis RAP2B, member o... 212 2e-53
BC027363_1(BC027363|pid:none) Mus musculus RAP2C, member of RAS ... 211 2e-53
AY190723_1(AY190723|pid:none) Pagrus major RAP2B-like protein mR... 211 3e-53
BC003403_1(BC003403|pid:none) Homo sapiens RAP2C, member of RAS ... 211 3e-53
BT059562_1(BT059562|pid:none) Salmo salar clone ssal-rgf-517-229... 211 4e-53
CU928179_284(CU928179|pid:none) Zygosaccharomyces rouxii strain ... 210 7e-53
CR382123_519(CR382123|pid:none) Kluyveromyces lactis strain NRRL... 209 9e-53
AE013599_4029(AE013599|pid:none) Drosophila melanogaster chromos... 209 1e-52
(Q12526) RecName: Full=Ras-like protein; Flags: Precursor; 207 3e-52
TVFFR3(S07187) transforming protein ras3 - fruit fly (Drosophila... 207 3e-52
JC6328(JC6328)Ras2 protein - slime mold (Dictyostelium discoideum) 207 3e-52
EU681274_1(EU681274|pid:none) Penicillium marneffei strain SUMS0... 207 3e-52
AM269955_41(AM269955|pid:none) Aspergillus niger contig An01c008... 207 6e-52
S58220(S58220) transforming protein ras-2 - Dictyostelium minutu... 206 1e-51
TVDORS(A01371)transforming protein ras - slime mold (Dictyosteli... 206 1e-51
(P13856) RecName: Full=Ras-related protein RSR1; Flags: Precurso... 204 4e-51
(P22280) RecName: Full=Ras-like protein 3; Flags: Precursor; &M... 204 5e-51
AY232652_1(AY232652|pid:none) Penicillium marneffei RAS GTPase (... 204 5e-51
AF134251_1(AF134251|pid:none) Candida albicans Ras homolog type ... 204 5e-51
C36365(C36365)transforming protein homolog MRAS3 - Rhizomucor ra... 204 5e-51
(O93856) RecName: Full=Ras-like protein; Flags: Precursor; &AF0... 204 5e-51
AJ719739_1(AJ719739|pid:none) Gallus gallus partial mRNA for hyp... 203 6e-51
(O42785) RecName: Full=Ras-like protein; AltName: Full=Ct-Ras; F... 203 6e-51
CU928180_381(CU928180|pid:none) Kluyveromyces thermotolerans str... 202 1e-50
M62610_1(M62610|pid:none) D.disocoideum ras mRNA, complete cds. 202 1e-50
AC117075_6(AC117075|pid:none) Dictyostelium discoideum chromosom... 202 2e-50
AE016819_697(AE016819|pid:none) Ashbya gossypii (= Eremothecium ... 201 4e-50
(P87018) RecName: Full=Ras-like protein; Flags: Precursor; &U79... 200 7e-50
Y17187_1(Y17187|pid:none) Platichthys flesus Ki-ras gene (exons ... 199 9e-50
(O42277) RecName: Full=GTPase KRas; AltName: Full=Ki-Ras; ... 199 9e-50
(P08647) RecName: Full=Ras-like protein 1; Flags: Precursor; &C... 199 9e-50
T19453(T19453)hypothetical protein C25D7.7 - Caenorhabditis eleg... 199 1e-49
FJ529376_1(FJ529376|pid:none) Dicentrarchus labrax Ki-ras-1 mRNA... 199 1e-49
AF493917_1(AF493917|pid:none) Homo sapiens Ras family small GTP ... 199 2e-49
(P32252) RecName: Full=Ras-like protein rasB; Flags: Precursor; ... 199 2e-49
X03771_1(X03771|pid:none) Yeast (Schizosaccharomyces pombe) RAS ... 199 2e-49
Y18167_1(Y18167|pid:none) Suberites domuncula mRNA for ras prote... 199 2e-49
AY889087_1(AY889087|pid:none) Synthetic construct Homo sapiens c... 198 2e-49
(Q9YH38) RecName: Full=GTPase KRas; AltName: Full=Ki-Ras; ... 198 2e-49
CU928168_367(CU928168|pid:none) Kluyveromyces thermotolerans str... 198 2e-49
AY891660_1(AY891660|pid:none) Synthetic construct Homo sapiens c... 198 2e-49
CR382123_579(CR382123|pid:none) Kluyveromyces lactis strain NRRL... 198 2e-49
S31720(S31720)transforming protein (K-ras) - short-tailed opossu... 198 2e-49
(P79800) RecName: Full=GTPase KRas; AltName: Full=K-Ras 2; AltNa... 198 3e-49
AB175073_1(AB175073|pid:none) Trametes hirsuta ras gene for RAS ... 198 3e-49
AF329890_1(AF329890|pid:none) Pisolithus sp. 441 ras-like protei... 198 3e-49
DQ078265_1(DQ078265|pid:none) Kryptolebias marmoratus p21 protei... 198 3e-49
CR380951_126(CR380951|pid:none) Candida glabrata strain CBS138 c... 198 3e-49
AY037008_1(AY037008|pid:none) Xenopus laevis small G-protein H-R... 197 4e-49
AK164065_1(AK164065|pid:none) Mus musculus 7 days embryo whole b... 197 4e-49
CU633899_504(CU633899|pid:none) Podospora anserina genomic DNA c... 197 5e-49
(P28775) RecName: Full=Ras-like protein; Flags: Precursor; &D00... 197 5e-49
(P38976) RecName: Full=Ras-like protein RAS2; Flags: Precursor; ... 197 5e-49
DQ195224_1(DQ195224|pid:none) Anguilla anguilla Ras (ras) mRNA, ... 196 8e-49
AF250024_1(AF250024|pid:none) Suillus bovinus Ras1p (ras1) mRNA,... 196 8e-49
TVBYSR(A22715)transforming protein ras - fission yeast (Schizos... 196 8e-49
DQ215240_1(DQ215240|pid:none) Taeniopygia guttata clone 0063P001... 196 1e-48
(P08642) RecName: Full=GTPase HRas; AltName: Full=Transforming p... 196 1e-48
BC095393_1(BC095393|pid:none) Danio rerio -Ha-ras Harvey rat sar... 196 1e-48
BT081877_1(BT081877|pid:none) Rana catesbeiana clone rcat-evr-53... 196 1e-48
(Q07983) RecName: Full=GTPase KRas; AltName: Full=K-Ras 2; AltNa... 196 1e-48
M54968_1(M54968|pid:none) Homo sapiens K-ras oncogene protein (K... 195 2e-48
BT059331_1(BT059331|pid:none) Salmo salar clone ssal-rgf-541-359... 195 2e-48
(P01116) RecName: Full=GTPase KRas; AltName: Full=K-Ras 2; AltNa... 195 2e-48
AK342684_1(AK342684|pid:none) Acyrthosiphon pisum ACYPI000776 mR... 195 2e-48
AK155064_1(AK155064|pid:none) Mus musculus NOD-derived CD11c +ve... 195 2e-48
(Q91806) RecName: Full=GTPase NRas; AltName: Full=Transforming p... 195 2e-48
FJ529378_1(FJ529378|pid:none) Liza aurata Ki-ras-2 mRNA, complet... 195 2e-48
A43816(A43816;S78409;S25430)transforming protein ras - rabbit 194 4e-48
AY893772_1(AY893772|pid:none) Synthetic construct Homo sapiens c... 194 4e-48
(P01112) RecName: Full=GTPase HRas; AltName: Full=Transforming p... 194 4e-48
BC099130_1(BC099130|pid:none) Rattus norvegicus Harvey rat sarco... 194 4e-48
BC086608_1(BC086608|pid:none) Rattus norvegicus Harvey rat sarco... 194 4e-48
Z23152_1(Z23152|pid:none) Kirsten murine sarcoma virus proto-onc... 194 4e-48
A54321(A54321)transforming protein c-Ki-ras-1, hepatic - rainbow... 194 4e-48
AB046925_1(AB046925|pid:none) Synthetic construct gene for Rai-c... 194 5e-48
(P20171) RecName: Full=GTPase HRas; AltName: Full=Transforming p... 194 5e-48
K01970_1(K01970|pid:none) S.cerevisiae RAS1 gene, complete codin... 194 5e-48
AB046924_1(AB046924|pid:none) Synthetic construct gene for Rai-c... 194 5e-48
AK301401_1(AK301401|pid:none) Homo sapiens cDNA FLJ50711 complet... 193 7e-48
AE016817_139(AE016817|pid:none) Ashbya gossypii (= Eremothecium ... 193 9e-48
CR382138_408(CR382138|pid:none) Debaryomyces hansenii strain CBS... 192 1e-47
BC076419_1(BC076419|pid:none) Danio rerio neuroblastoma RAS vira... 192 1e-47
CT027601_4(CT027601|pid:none) Zebrafish DNA sequence from clone ... 192 1e-47
(Q5F352) RecName: Full=GTPase NRas; AltName: Full=Transforming p... 192 1e-47
AK316447_1(AK316447|pid:none) Homo sapiens cDNA, FLJ79346 comple... 192 1e-47
BC096978_1(BC096978|pid:none) Danio rerio similar to Transformin... 192 1e-47
AY891193_1(AY891193|pid:none) Synthetic construct Homo sapiens c... 192 2e-47
AB220379_1(AB220379|pid:none) Macaca fascicularis mRNA, clone Qb... 191 3e-47
NRL(1Q21) transforming protein p21 (H-ras-1) (catalytic domain w... 191 3e-47
(B4JFU8) RecName: Full=Ras-like protein 1; Flags: Precursor; 191 3e-47
(Q04970) RecName: Full=GTPase NRas; AltName: Full=Transforming p... 191 3e-47
(B4NJ72) RecName: Full=Ras-like protein 1; Flags: Precursor; 191 3e-47
(B4LY29) RecName: Full=Ras-like protein 1; Flags: Precursor; 191 3e-47
AK150357_1(AK150357|pid:none) Mus musculus bone marrow macrophag... 191 3e-47
S34138(S34138)transforming protein (K-ras) - Kirsten murine sarc... 191 3e-47
EF043589_1(EF043589|pid:none) Synthetic construct clone ATCC 106... 191 3e-47
CT010359_1(CT010359|pid:none) Mus musculus full open reading fra... 191 3e-47
(P01111) RecName: Full=GTPase NRas; AltName: Full=Transforming p... 191 3e-47
NRL(121P) H-ras p21 protein complex with guanosine-5'-[b,g-methy... 191 3e-47
AK011704_1(AK011704|pid:none) Mus musculus 10 days embryo whole ... 191 3e-47
(Q95ME4) RecName: Full=GTPase NRas; AltName: Full=Transforming p... 191 3e-47
NRL(721P) H-ras p21 protein mutant with gln 61 replaced by leu (... 191 3e-47
AY892487_1(AY892487|pid:none) Synthetic construct Homo sapiens c... 191 3e-47
(P08556) RecName: Full=GTPase NRas; AltName: Full=Transforming p... 191 3e-47
FJ176739_1(FJ176739|pid:none) Meloidogyne incognita RAS (Let-60)... 191 3e-47
AK165960_1(AK165960|pid:none) Mus musculus lung RCB-0558 LLC cDN... 191 3e-47
(P23175) RecName: Full=GTPase HRas; AltName: Full=Transforming p... 191 3e-47
NRL(621P) H-ras p21 protein mutant with gln 61 replaced by his (... 191 3e-47
AY886901_1(AY886901|pid:none) Kryptolebias marmoratus p21-ras pr... 191 4e-47
BC048875_1(BC048875|pid:none) Danio rerio zgc:55558, mRNA (cDNA ... 191 4e-47
(P22126) RecName: Full=Protein ras-1; Flags: Precursor; &AB0169... 190 6e-47
(Q05147) RecName: Full=GTPase KRas; AltName: Full=Ki-Ras; ... 190 6e-47
NRL(221P) H-ras p21 protein mutant with asp 38 replaced by glu (... 190 7e-47
J02207_2(J02207|pid:none) harvey murine sarcoma virus p21 v-has ... 189 1e-46
(P79737) RecName: Full=GTPase NRas; AltName: Full=Transforming p... 189 1e-46
(P01115) RecName: Full=Transforming protein p29; Contains: Rec... 189 1e-46
(Q5RD87) RecName: Full=GTPase NRas; AltName: Full=Transforming p... 189 1e-46
CR380948_191(CR380948|pid:none) Candida glabrata strain CBS138 c... 189 1e-46
EU162748_1(EU162748|pid:none) Kryptolebias marmoratus N-ras (N-r... 189 1e-46
(P01114) RecName: Full=Transforming protein p29; Contains: Rec... 189 1e-46
NRL(1AGP) H-ras p21 protein mutant with gly 12 replaced by asp (... 189 2e-46
AP007167_413(AP007167|pid:none) Aspergillus oryzae RIB40 genomic... 189 2e-46
AY149916_1(AY149916|pid:none) Ustilago maydis small G-protein Ra... 189 2e-46
NRL(421P) H-ras p21 protein mutant with gly 12 replaced by arg (... 188 2e-46
Y17188_1(Y17188|pid:none) Platichthys flesus Ki-ras gene (exons ... 188 2e-46
NRL(821P) C-h-ras p21 protein (residues 1 166) mutant with gly 1... 188 2e-46
PDBN(1RVD)A MOL_ID: 1;MOL_ID: 1; MOLECULE: TRANSFORMING PROTEIN ... 188 3e-46
NRL(2Q21) transforming protein p21 (H-ras-1) mutant (G12V) (cata... 188 3e-46
U45968_1(U45968|pid:none) Oncorhynchus mykiss G-protein (P-ras) ... 187 4e-46
BT074906_1(BT074906|pid:none) Osmerus mordax clone omor-eva-510-... 187 5e-46
U45967_1(U45967|pid:none) Oncorhynchus mykiss G-protein (P-ras) ... 186 8e-46
X00528_1(X00528|pid:none) S.cerevisiae rasH related gene c-ras(s... 186 8e-46
AF085280_1(AF085280|pid:none) Xenopus laevis Ras protein (ras) m... 186 1e-45
K01960_1(K01960|pid:none) D.melanogaster chromosome 3 locus 85D ... 185 2e-45
AJ431729_1(AJ431729|pid:none) Oscheius tipulae mRNA for small G ... 185 2e-45
B36365(B36365)transforming protein homolog MRAS2 - Rhizomucor ra... 184 3e-45
(P51539) RecName: Full=Ras-like protein RAS1; Flags: Precursor; ... 184 4e-45
M55535_1(M55535|pid:none) C.elegans ras protein (let-60 ras) mRN... 184 4e-45
(P04388) RecName: Full=Ras-like protein 2; Flags: Precursor; &A... 184 5e-45
AF545586_1(AF545586|pid:none) Ustilago maydis ras-like protein R... 183 7e-45
AJ785000_1(AJ785000|pid:none) Echinococcus multilocularis mRNA f... 183 7e-45
BC092803_1(BC092803|pid:none) Danio rerio related RAS viral (r-r... 182 2e-44
EU560397_1(EU560397|pid:none) Echinococcus granulosus dev-stage ... 182 2e-44
U53177_1(U53177|pid:none) Schistosoma mansoni ras protein homolo... 182 2e-44
AJ851555_1(AJ851555|pid:none) Gallus gallus mRNA for hypothetica... 181 3e-44
AJ720666_1(AJ720666|pid:none) Gallus gallus mRNA for hypothetica... 181 3e-44
(P62070) RecName: Full=Ras-related protein R-Ras2; AltName: Full... 181 4e-44
AB206960_1(AB206960|pid:none) Bombyx mori Bras2 mRNA for ras onc... 181 4e-44
AK078870_1(AK078870|pid:none) Mus musculus adult male colon cDNA... 181 4e-44
AF493924_1(AF493924|pid:none) Homo sapiens Ras family small GTP ... 181 4e-44
AY888825_1(AY888825|pid:none) Synthetic construct Homo sapiens c... 181 4e-44
AK011419_1(AK011419|pid:none) Mus musculus 10 days embryo whole ... 180 8e-44
BC073313_1(BC073313|pid:none) Xenopus laevis MGC80716 protein, m... 179 1e-43
DQ198150_1(DQ198150|pid:none) Nassarius reticulatus Ras (ras) mR... 179 2e-43
BC123337_1(BC123337|pid:none) Xenopus laevis hypothetical protei... 178 2e-43
AB104910_1(AB104910|pid:none) Schizophyllum commune Ras gene for... 177 4e-43
DQ305041_1(DQ305041|pid:none) Mytilus galloprovincialis ras (ras... 177 4e-43
M10804_1(M10804|pid:none) Drosophila melanogaster ras oncogene, ... 177 4e-43
AE013599_2301(AE013599|pid:none) Drosophila melanogaster chromos... 177 5e-43
(Q55CC0) RecName: Full=Ras-like protein rasW; Flags: Precursor; 177 5e-43
BC158407_1(BC158407|pid:none) Xenopus tropicalis related RAS vir... 177 5e-43
CU640366_102(CU640366|pid:none) Podospora anserina genomic DNA c... 177 5e-43
AY787853_1(AY787853|pid:none) Rana catesbeiana Kirsten murine sa... 177 6e-43
AJ437024_1(AJ437024|pid:none) Homo sapiens mRNA for p19 H-RasIDX... 177 6e-43
BC050837_1(BC050837|pid:none) Mus musculus Harvey rat sarcoma vi... 177 6e-43
FN314227_1(FN314227|pid:none) Schistosoma japonicum isolate Anhu... 175 2e-42
AK299606_1(AK299606|pid:none) Homo sapiens cDNA FLJ61162 complet... 174 4e-42
(Q55CB7) RecName: Full=Ras-like protein rasY; Flags: Precursor; 173 7e-42
BT074696_1(BT074696|pid:none) Osmerus mordax clone omor-eva-519-... 173 9e-42
AM920428_514(AM920428|pid:none) Penicillium chrysogenum Wisconsi... 172 1e-41
AK341374_1(AK341374|pid:none) Acyrthosiphon pisum ACYPI007731 mR... 172 1e-41
AY547438_1(AY547438|pid:none) Paracoccidioides brasiliensis Ras,... 172 2e-41
AF045637_1(AF045637|pid:none) Caenorhabditis elegans cosmid C44C... 172 2e-41
AY910576_1(AY910576|pid:none) Paracoccidioides brasiliensis Ras2... 172 2e-41
T32953(T32953)hypothetical protein C44C11.1 - Caenorhabditis ele... 172 2e-41
AM270101_37(AM270101|pid:none) Aspergillus niger contig An05c001... 172 2e-41
CR382128_675(CR382128|pid:none) Yarrowia lipolytica strain CLIB1... 172 2e-41
AY813844_1(AY813844|pid:none) Schistosoma japonicum SJCHGC06290 ... 171 3e-41
FN357312_49(FN357312|pid:none) Schistosoma mansoni genome sequen... 171 3e-41
DQ414548_1(DQ414548|pid:none) Suberites domuncula RalA gene, com... 171 4e-41
AY266674_1(AY266674|pid:none) Aspergillus fumigatus RasB (rasB) ... 171 4e-41
AY890832_1(AY890832|pid:none) Synthetic construct Homo sapiens c... 171 5e-41
BC085752_1(BC085752|pid:none) Rattus norvegicus muscle RAS oncog... 171 5e-41
D88312_1(D88312|pid:none) Rattus norvegicus mRNA for Rap 1A, par... 170 6e-41
(O08989) RecName: Full=Ras-related protein M-Ras; AltName: Full=... 170 6e-41
BC085637_1(BC085637|pid:none) Danio rerio zgc:92116, mRNA (cDNA ... 170 8e-41
AY460177_1(AY460177|pid:none) Gallus gallus R-Ras3 mRNA, complet... 170 8e-41
AY891608_1(AY891608|pid:none) Synthetic construct Homo sapiens c... 169 1e-40
AB172308_1(AB172308|pid:none) Macaca fascicularis brain cDNA clo... 169 1e-40
FN392322_708(FN392322|pid:none) Pichia pastoris GS115 chromosome... 169 1e-40
(P10301) RecName: Full=Ras-related protein R-Ras; AltName: Full=... 169 1e-40
DQ972971_1(DQ972971|pid:none) Sus scrofa RIT1 mRNA, complete cds. 169 1e-40
AE014298_566(AE014298|pid:none) Drosophila melanogaster chromoso... 169 1e-40
BC053216_1(BC053216|pid:none) Danio rerio v-ral simian leukemia ... 169 1e-40
BC140603_1(BC140603|pid:none) Bos taurus muscle RAS oncogene hom... 169 1e-40
BC072861_1(BC072861|pid:none) Xenopus laevis MGC80266 protein, m... 169 1e-40
BC110229_1(BC110229|pid:none) Bos taurus related RAS viral (r-ra... 169 1e-40
(P70426) RecName: Full=GTP-binding protein Rit1; AltName: Full=R... 169 2e-40
(Q92963) RecName: Full=GTP-binding protein Rit1; AltName: Full=R... 168 3e-40
EU596600_1(EU596600|pid:none) Ovis aries RIT mRNA, complete cds. 168 3e-40
(P70425) RecName: Full=GTP-binding protein Rit2; AltName: Full=R... 167 4e-40
(Q5BJQ5) RecName: Full=GTP-binding protein Rit2; &AF084463_1(AF... 167 5e-40
EU616728_1(EU616728|pid:none) Kryptolebias marmoratus R-ras3 mRN... 167 5e-40
BT075755_1(BT075755|pid:none) Osmerus mordax clone omor-eva-506-... 167 7e-40
BC018060_1(BC018060|pid:none) Homo sapiens Ras-like without CAAX... 166 1e-39
(Q99578) RecName: Full=GTP-binding protein Rit2; AltName: Full=R... 166 1e-39
(P11233) RecName: Full=Ras-related protein Ral-A; Flags: Precurs... 165 3e-39
(P63320) RecName: Full=Ras-related protein Ral-A; Flags: Precurs... 164 4e-39
(P22124) RecName: Full=Ras-related protein O-RAL; Flags: Precurs... 164 4e-39
BC102111_1(BC102111|pid:none) Bos taurus ras related v-ral simia... 164 6e-39
AF278539_1(AF278539|pid:none) Xenopus laevis Ras related small G... 164 6e-39
BT025381_1(BT025381|pid:none) Bos taurus v-ral simian leukemia v... 164 6e-39
BT078291_1(BT078291|pid:none) Lepeophtheirus salmonis Pacific fo... 163 7e-39
AK013881_1(AK013881|pid:none) Mus musculus 12 days embryo head c... 163 1e-38
BC163607_1(BC163607|pid:none) Danio rerio si:ch211-93a2.3, mRNA ... 163 1e-38
U01053_1(U01053|pid:none) Entamoeba histolytica HM-1:IMSS ras ho... 162 1e-38
BT073842_1(BT073842|pid:none) Oncorhynchus mykiss clone omyk-evo... 162 1e-38
DQ192645_1(DQ192645|pid:none) Trichomonas vaginalis RasC mRNA, c... 162 1e-38
AF294349_1(AF294349|pid:none) Filobasidiella neoformans Ras2 (RA... 162 2e-38
BT076579_1(BT076579|pid:none) Caligus rogercresseyi clone crog-e... 162 2e-38
(Q9YH09) RecName: Full=Ras-related protein ralB-A; AltName: Full... 162 2e-38
BT046608_1(BT046608|pid:none) Salmo salar clone ssal-evf-563-065... 161 3e-38
(Q4R379) RecName: Full=Ras-related protein Ral-B; Flags: Precurs... 161 3e-38
AY891516_1(AY891516|pid:none) Synthetic construct Homo sapiens c... 161 3e-38
E38625(E38625)GTP-binding protein o-ral - electric ray (Discopyg... 161 3e-38
(Q6IP71) RecName: Full=Ras-related protein ralB-B; AltName: Full... 161 4e-38
(P36860) RecName: Full=Ras-related protein Ral-B; Flags: Precurs... 160 5e-38
BC146173_1(BC146173|pid:none) Bos taurus v-ral simian leukemia v... 160 5e-38
T21066(T21066) hypothetical protein F17C8.4 - Caenorhabditis ele... 160 5e-38
(Q9JIW9) RecName: Full=Ras-related protein Ral-B; Flags: Precurs... 160 6e-38
BC071460_1(BC071460|pid:none) Danio rerio zgc:86798, mRNA (cDNA ... 160 8e-38
AL442067_5(AL442067|pid:none) Human DNA sequence from clone RP11... 159 1e-37
AK138206_1(AK138206|pid:none) Mus musculus adult male hypothalam... 158 3e-37
U01054_1(U01054|pid:none) Entamoeba histolytica HM-1:IMSS ras ho... 157 5e-37
FN313882_1(FN313882|pid:none) Schistosoma japonicum isolate Anhu... 155 2e-36
AL645755_4(AL645755|pid:none) Zebrafish DNA sequence from clone ... 153 1e-35
AK127675_1(AK127675|pid:none) Homo sapiens cDNA FLJ45773 fis, cl... 152 1e-35
AB112425_1(AB112425|pid:none) Entamoeba histolytica Ehras3 mRNA ... 152 2e-35
CP000502_42(CP000502|pid:none) Pichia stipitis CBS 6054 chromoso... 151 3e-35
AF045637_2(AF045637|pid:none) Caenorhabditis elegans cosmid C44C... 149 1e-34
FM992690_484(FM992690|pid:none) Candida dubliniensis CD36 chromo... 149 1e-34
AY635992_1(AY635992|pid:none) Monacrosporium haptotylum GTPase (... 149 2e-34
K01962_1(K01962|pid:none) D.melanogaster chromosome 3 locus 64B ... 148 2e-34
FN392320_1320(FN392320|pid:none) Pichia pastoris GS115 chromosom... 148 3e-34
BC074244_1(BC074244|pid:none) Xenopus laevis MGC83985 protein, m... 148 3e-34
AF186651_1(AF186651|pid:none) Drosophila melanogaster strain A1 ... 147 4e-34
BC118820_1(BC118820|pid:none) Xenopus tropicalis DIRAS family, G... 147 4e-34
(Q55CB0) RecName: Full=Ras-like protein rasU; Flags: Precursor; 147 5e-34
(Q5R6S2) RecName: Full=GTP-binding protein Di-Ras2; AltName: Ful... 147 5e-34
(Q96HU8) RecName: Full=GTP-binding protein Di-Ras2; AltName: Ful... 147 7e-34
AJ579363_1(AJ579363|pid:none) Echinococcus multilocularis mRNA f... 146 1e-33
BC157236_1(BC157236|pid:none) Xenopus tropicalis DIRAS family, G... 145 3e-33
BC044147_1(BC044147|pid:none) Danio rerio DIRAS family, GTP-bind... 144 4e-33
AJ579364_1(AJ579364|pid:none) Echinococcus multilocularis ral ge... 144 5e-33
DQ184485_1(DQ184485|pid:none) Trichomonas vaginalis small Ras GT... 143 8e-33
EU124620_1(EU124620|pid:none) Lutzomyia longipalpis putative Ras... 143 8e-33
(O95057) RecName: Full=GTP-binding protein Di-Ras1; AltName: Ful... 142 1e-32
M73694_1(M73694|pid:none) Oncorhynchus mykiss ras-1 mRNA, partia... 142 2e-32
BX470229_1(BX470229|pid:none) Zebrafish DNA sequence from clone ... 141 3e-32
AK298768_1(AK298768|pid:none) Homo sapiens cDNA FLJ52018 complet... 140 5e-32
AF081118_1(AF081118|pid:none) Mus musculus H-ras gene, partial c... 140 7e-32
DQ213831_1(DQ213831|pid:none) Taeniopygia guttata clone 0058P001... 140 9e-32
FN357653_12(FN357653|pid:none) Schistosoma mansoni genome sequen... 139 1e-31
(Q96A58) RecName: Full=Ras-related and estrogen-regulated growth... 139 2e-31
AJ575171_1(AJ575171|pid:none) Sordaria macrospora partial smu216... 139 2e-31
(O94363) RecName: Full=GTP-binding protein rhb1; AltName: Full=G... 139 2e-31
CR382131_1267(CR382131|pid:none) Yarrowia lipolytica strain CLIB... 138 3e-31
DQ213832_1(DQ213832|pid:none) Taeniopygia guttata clone 0061P003... 137 7e-31
CR382133_421(CR382133|pid:none) Debaryomyces hansenii strain CBS... 136 1e-30
U78166_1(U78166|pid:none) Human Ras-like small GTPase RIBA mRNA,... 135 2e-30
AY814574_1(AY814574|pid:none) Schistosoma japonicum clone SJCHGC... 134 4e-30
BT080865_1(BT080865|pid:none) Caligus clemensi clone ccle-evs-50... 134 5e-30
BC059505_1(BC059505|pid:none) Danio rerio zgc:73144, mRNA (cDNA ... 134 6e-30
EU263339_1(EU263339|pid:none) Bombyx mori RHEB mRNA, complete cds. 133 8e-30
DQ213959_1(DQ213959|pid:none) Taeniopygia guttata clone 0061P003... 133 1e-29
BC124281_1(BC124281|pid:none) Danio rerio zgc:153231, mRNA (cDNA... 132 2e-29
T15833(T15833)hypothetical protein C54A12.4 - Caenorhabditis ele... 131 3e-29
DQ213866_1(DQ213866|pid:none) Taeniopygia guttata clone 0058P003... 131 3e-29
AK342025_1(AK342025|pid:none) Acyrthosiphon pisum ACYPI008618 mR... 131 4e-29
AY892745_1(AY892745|pid:none) Synthetic construct Homo sapiens c... 130 5e-29
(Q15382) RecName: Full=GTP-binding protein Rheb; AltName: Full=R... 130 5e-29
BT080247_1(BT080247|pid:none) Caligus clemensi clone ccle-evs-50... 130 7e-29
AK289370_1(AK289370|pid:none) Homo sapiens cDNA FLJ77896 complet... 130 7e-29
(Q921J2) RecName: Full=GTP-binding protein Rheb; AltName: Full=R... 130 9e-29
BC155994_1(BC155994|pid:none) Xenopus tropicalis RAS-like, estro... 129 1e-28
(Q56JV3) RecName: Full=GTP-binding protein Rheb; AltName: Full=R... 128 3e-28
BC074172_1(BC074172|pid:none) Xenopus laevis MGC81985 protein, m... 128 3e-28
BC066307_1(BC066307|pid:none) Homo sapiens Ras homolog enriched ... 128 3e-28
AE014297_1071(AE014297|pid:none) Drosophila melanogaster chromos... 128 3e-28
BT075930_1(BT075930|pid:none) Caligus rogercresseyi clone crog-e... 128 3e-28
BT076341_1(BT076341|pid:none) Caligus rogercresseyi clone crog-e... 128 3e-28
BT076020_1(BT076020|pid:none) Caligus rogercresseyi clone crog-e... 128 3e-28
AJ002963_1(AJ002963|pid:none) Trypanosoma brucei ras-like gene. 127 4e-28
AB039919_1(AB039919|pid:none) Mus musculus rheb mRNA for Ras hom... 127 6e-28
BC074392_1(BC074392|pid:none) Xenopus laevis MGC84355 protein, m... 127 8e-28
BT047769_1(BT047769|pid:none) Salmo salar clone ssal-evd-509-015... 127 8e-28
DQ414550_1(DQ414550|pid:none) Suberites domuncula Rheb gene, com... 125 2e-27
BC135999_1(BC135999|pid:none) Xenopus tropicalis RASD family, me... 124 4e-27
DQ836048_1(DQ836048|pid:none) Trichomonas vaginalis small Rab GT... 124 4e-27
BT046606_1(BT046606|pid:none) Salmo salar clone ssal-rgb2-504-07... 124 6e-27
AM270393_34(AM270393|pid:none) Aspergillus niger contig An17c011... 124 6e-27
AK340383_1(AK340383|pid:none) Acyrthosiphon pisum ACYPI000378 mR... 123 8e-27
DQ443431_1(DQ443431|pid:none) Bombyx mori ras-related GTP bindin... 123 8e-27
AF283573_1(AF283573|pid:none) Aspergillus fumigatus Ras homolog ... 123 8e-27
BC103168_1(BC103168|pid:none) Bos taurus DIRAS family, GTP-bindi... 123 8e-27
L49401_1(L49401|pid:none) Microgadus tomcod RAS gene, 5' end of ... 123 1e-26
(Q60529) RecName: Full=GTPase HRas; AltName: Full=Transforming p... 122 1e-26
TVGPRT(A23652) GTP-binding protein N-ras, short splice form - gu... 122 2e-26
K03210_1(K03210|pid:none) Human (T3M-4) cellular transforming on... 122 2e-26
DQ278187_1(DQ278187|pid:none) Oryzias latipes small GTPase Ras-d... 121 3e-26
DQ414549_1(DQ414549|pid:none) Suberites domuncula Rap1-like gene... 121 3e-26
CR933442_1(CR933442|pid:none) Paramecium tetraurelia, Small GTPa... 121 3e-26
A43808(A43808) transforming protein (ras-1) - bovine (fragment) ... 120 5e-26
BT048727_1(BT048727|pid:none) Salmo salar clone ssal-rgb2-626-04... 120 5e-26
BT077861_1(BT077861|pid:none) Lepeophtheirus salmonis Pacific fo... 120 9e-26
(P34443) RecName: Full=GTP-binding protein Rheb homolog 1; Flags... 119 1e-25
BT078127_1(BT078127|pid:none) Lepeophtheirus salmonis Pacific fo... 119 2e-25
BT080780_1(BT080780|pid:none) Caligus clemensi clone ccle-evs-50... 119 2e-25
BT081259_1(BT081259|pid:none) Caligus clemensi clone ccle-evs-51... 119 2e-25
BT075214_1(BT075214|pid:none) Osmerus mordax clone omor-eva-502-... 119 2e-25
M25898_1(M25898|pid:none) Human leukemic bone marrow transformin... 119 2e-25
CR933475_1(CR933475|pid:none) Paramecium tetraurelia, Small GTPa... 119 2e-25
BT077899_1(BT077899|pid:none) Lepeophtheirus salmonis Pacific fo... 118 3e-25
BT047263_1(BT047263|pid:none) Salmo salar clone ssal-evf-559-220... 118 3e-25
BT080639_1(BT080639|pid:none) Caligus clemensi clone ccle-evs-51... 118 3e-25
S51495(S51495;S70850)GTP-binding protein RYL1 - yeast (Yarrowia ... 118 3e-25
DQ278185_1(DQ278185|pid:none) Gasterosteus aculeatus small GTPas... 118 4e-25
BT076429_1(BT076429|pid:none) Caligus rogercresseyi clone crog-e... 118 4e-25
DQ278186_1(DQ278186|pid:none) Oncorhynchus mykiss small GTPase R... 118 4e-25
FN317641_1(FN317641|pid:none) Schistosoma japonicum isolate Anhu... 117 5e-25
AE017342_371(AE017342|pid:none) Cryptococcus neoformans var. neo... 117 6e-25
AB054578_1(AB054578|pid:none) Entamoeba histolytica EhRab1A mRNA... 117 6e-25
BT077576_1(BT077576|pid:none) Lepeophtheirus salmonis Pacific fo... 117 6e-25
DQ278183_1(DQ278183|pid:none) Takifugu rubripes small GTPase Ras... 116 1e-24
FN359251_2(FN359251|pid:none) Schistosoma mansoni genome sequenc... 116 1e-24
BT081293_1(BT081293|pid:none) Caligus clemensi clone ccle-evs-51... 116 1e-24
M73692_1(M73692|pid:none) Oncorhynchus mykiss ras-1 mRNA, 5' end. 116 1e-24
BC083526_1(BC083526|pid:none) Danio rerio related RAS viral (r-r... 116 1e-24
BC149542_1(BC149542|pid:none) Bos taurus RAB12, member RAS oncog... 116 1e-24
(Q01890) RecName: Full=Ras-like GTP-binding protein YPT1; &JC53... 115 2e-24
AY729884_1(AY729884|pid:none) Danio rerio Ras-dva-2 small GTPase... 115 2e-24
AM920439_247(AM920439|pid:none) Penicillium chrysogenum Wisconsi... 115 2e-24
BC081268_1(BC081268|pid:none) Xenopus laevis cDNA clone MGC:8640... 115 2e-24
AP007155_660(AP007155|pid:none) Aspergillus oryzae RIB40 genomic... 115 2e-24
S19438(S19438;S27137)hypothetical protein YCR027c - yeast (Sacch... 115 3e-24
BT077156_1(BT077156|pid:none) Caligus rogercresseyi clone crog-e... 115 3e-24
AF389109_1(AF389109|pid:none) Entamoeba histolytica small GTP-bi... 115 3e-24
AF101310_4(AF101310|pid:none) Caenorhabditis elegans cosmid C39F... 115 3e-24
M73690_1(M73690|pid:none) Oncorhynchus mykiss ras-1 gene, 5' end. 115 3e-24
AE014297_3082(AE014297|pid:none) Drosophila melanogaster chromos... 115 3e-24
EU380237_1(EU380237|pid:none) Anolis carolinensis small GTPase R... 114 4e-24
AP007150_599(AP007150|pid:none) Aspergillus oryzae RIB40 genomic... 114 4e-24
AY896281_1(AY896281|pid:none) Trichomonas vaginalis strain G3 sm... 114 4e-24
AY729886_1(AY729886|pid:none) Gallus gallus ras-dva small GTPase... 114 5e-24
EF212397_1(EF212397|pid:none) Drosophila novamexicana Ras1 gene,... 114 7e-24
AF509341_1(AF509341|pid:none) Magnaporthe grisea putative ras-re... 114 7e-24
(P51152) RecName: Full=Ras-related protein Rab-12; Flags: Fragme... 114 7e-24
U62088_1(U62088|pid:none) Felis catus ras p21 (H-ras) mRNA, part... 113 9e-24
AY896243_1(AY896243|pid:none) Trichomonas vaginalis strain G3 sm... 112 1e-23
AL161545_36(AL161545|pid:none) Arabidopsis thaliana DNA chromoso... 112 2e-23
AF097941_1(AF097941|pid:none) Mesocricetus auratus N-ras gene, e... 112 2e-23
GN106151_1(GN106151|pid:none) Sequence 10932 from Patent WO20090... 112 2e-23
(A8XAD0) RecName: Full=GTP-binding protein Rheb homolog 1; AltNa... 112 2e-23
BC135228_1(BC135228|pid:none) Xenopus tropicalis RAB12, member R... 112 2e-23
AM920437_2627(AM920437|pid:none) Penicillium chrysogenum Wiscons... 112 3e-23
BT064760_1(BT064760|pid:none) Zea mays full-length cDNA clone ZM... 112 3e-23
GN106165_1(GN106165|pid:none) Sequence 10946 from Patent WO20090... 112 3e-23
GN080095_1(GN080095|pid:none) Sequence 698 from Patent WO2009027... 112 3e-23
GN080113_1(GN080113|pid:none) Sequence 716 from Patent WO2009027... 112 3e-23
EF103367_1(EF103367|pid:none) Haliotis discus discus Ras-related... 112 3e-23
(P40392) RecName: Full=Ras-related protein RIC1; &AK243597_1(AK... 111 3e-23
AE014134_1275(AE014134|pid:none) Drosophila melanogaster chromos... 111 3e-23
BT087588_1(BT087588|pid:none) Zea mays full-length cDNA clone ZM... 111 3e-23
EF086613_1(EF086613|pid:none) Picea sitchensis clone WS02920_I20... 111 3e-23
(Q2HJI8) RecName: Full=Ras-related protein Rab-8B; &BC105330_1(... 111 3e-23
GN080135_1(GN080135|pid:none) Sequence 738 from Patent WO2009027... 111 3e-23
(Q39570) RecName: Full=GTP-binding protein YPTC4; &JC4106(JC410... 111 4e-23
M73693_1(M73693|pid:none) Oncorhynchus mykiss ras-2 mRNA, 5' end. 111 4e-23
GN080133_1(GN080133|pid:none) Sequence 736 from Patent WO2009027... 111 4e-23
AF013572_1(AF013572|pid:none) Bombyx mori small GTP-binding prot... 111 4e-23
GN080127_1(GN080127|pid:none) Sequence 730 from Patent WO2009027... 111 4e-23
DQ393575_1(DQ393575|pid:none) Metarhizium anisopliae RAB/GTPase ... 111 4e-23
BC135798_1(BC135798|pid:none) Xenopus tropicalis RAB8B, member R... 110 6e-23
AB241225_1(AB241225|pid:none) Pyrsonympha grandis RsSmRab7_1 mRN... 110 6e-23
(Q9Y272) RecName: Full=Dexamethasone-induced Ras-related protein... 110 6e-23
AE014298_25(AE014298|pid:none) Drosophila melanogaster chromosom... 110 6e-23
AK104346_1(AK104346|pid:none) Oryza sativa Japonica Group cDNA c... 110 6e-23
BC127330_1(BC127330|pid:none) Xenopus tropicalis RAB8B, member R... 110 6e-23
(P22125) RecName: Full=Ras-related protein ORAB-1; &M38393_1(M3... 110 7e-23
CR382125_525(CR382125|pid:none) Kluyveromyces lactis strain NRRL... 110 7e-23
AF468652_1(AF468652|pid:none) Homo sapiens RAB2B mRNA, complete ... 110 1e-22
(Q7TNZ5) RecName: Full=GTPase RhebL1; AltName: Full=Ras homolog ... 110 1e-22
AM910992_200(AM910992|pid:none) Plasmodium knowlesi strain H chr... 110 1e-22
BT080552_1(BT080552|pid:none) Caligus clemensi clone ccle-evs-51... 109 1e-22
BT081291_1(BT081291|pid:none) Caligus clemensi clone ccle-evs-51... 109 1e-22
AC006423_15(AC006423|pid:none) Arabidopsis thaliana chromosome I... 109 1e-22
(Q7Z444) RecName: Full=GTPase ERas; Short=E-Ras; AltNam... 109 1e-22
(Q92930) RecName: Full=Ras-related protein Rab-8B; &AB038995_1(... 109 1e-22
Y08425_1(Y08425|pid:none) N.plumbaginifolia mRNA for small GTP-b... 109 1e-22
AY439005_1(AY439005|pid:none) Fucus distichus Rab family GTPase ... 109 1e-22
BT076103_1(BT076103|pid:none) Caligus rogercresseyi clone crog-e... 109 1e-22
AJ278658_1(AJ278658|pid:none) Aspergillus niger srgA gene for a ... 109 1e-22
BC078493_1(BC078493|pid:none) Xenopus laevis MGC85265 protein, m... 109 1e-22
AF262018_1(AF262018|pid:none) Homo sapiens dexamethasone-induced... 109 1e-22
BC045014_1(BC045014|pid:none) Xenopus laevis RAB1, member RAS on... 109 1e-22
AL606522_3(AL606522|pid:none) Mouse DNA sequence from clone RP23... 109 2e-22
DQ214474_1(DQ214474|pid:none) Taeniopygia guttata clone 0063P003... 109 2e-22
J02998_1(J02998|pid:none) Rat ras-related protein mRNA, clone NT... 109 2e-22
BC103301_1(BC103301|pid:none) Bos taurus RAS, dexamethasone-indu... 109 2e-22
BT057068_1(BT057068|pid:none) Salmo salar clone ssal-eve-570-039... 109 2e-22
AJ272025_1(AJ272025|pid:none) Colletotrichum lindemuthianum pt1 ... 109 2e-22
(Q52NJ2) RecName: Full=Ras-related protein Rab-1A; &AY996813_1(... 109 2e-22
AK151085_1(AK151085|pid:none) Mus musculus bone marrow macrophag... 109 2e-22
(P24498) RecName: Full=Ras-like protein; Flags: Precursor; &S13... 109 2e-22
FJ232920_1(FJ232920|pid:none) Mugil curema Ras (ras) mRNA, parti... 109 2e-22
GM977161_1(GM977161|pid:none) Sequence 69 from Patent WO20081456... 109 2e-22
(P62820) RecName: Full=Ras-related protein Rab-1A; AltName: Full... 109 2e-22
BC060015_1(BC060015|pid:none) Xenopus laevis hypothetical protei... 109 2e-22
BC107443_1(BC107443|pid:none) Rattus norvegicus RAB2B, member RA... 108 2e-22
CR932686_1(CR932686|pid:none) Paramecium tetraurelia, Small GTPa... 108 2e-22
BC142846_1(BC142846|pid:none) Danio rerio RAB8B, member RAS onco... 108 2e-22
AB076904_1(AB076904|pid:none) Ciona intestinalis Ci-rab2 mRNA fo... 108 2e-22
(P35280) RecName: Full=Ras-related protein Rab-8A; &(P55258) Re... 108 2e-22
CR859178_1(CR859178|pid:none) Pongo abelii mRNA; cDNA DKFZp459K2... 108 2e-22
(Q75J93) RecName: Full=Circularly permutated Ras protein 1; ... 108 2e-22
S53268_1(S53268|pid:none) Homo sapiens RAS-related protein MEL (... 108 2e-22
I78851(I78851) GTP-binding protein MEL - mouse &S53270_1(S53270... 108 2e-22
AY892042_1(AY892042|pid:none) Synthetic construct Homo sapiens c... 108 2e-22
DQ516976_1(DQ516976|pid:none) Gallus gallus dexamethasone-induce... 108 2e-22
(P61026) RecName: Full=Ras-related protein Rab-10; &(P61027) Re... 108 2e-22
BX647601_1(BX647601|pid:none) Homo sapiens mRNA; cDNA DKFZp313C1... 108 2e-22
AK008725_1(AK008725|pid:none) Mus musculus adult male stomach cD... 108 2e-22
AK147178_1(AK147178|pid:none) Mus musculus 17 days pregnant adul... 108 2e-22
GN106103_1(GN106103|pid:none) Sequence 10884 from Patent WO20090... 108 3e-22
GN106097_1(GN106097|pid:none) Sequence 10878 from Patent WO20090... 108 3e-22
GN105857_1(GN105857|pid:none) Sequence 10638 from Patent WO20090... 108 3e-22
(P24409) RecName: Full=Ras-related protein Rab-10; &D36364(D363... 108 3e-22
BT077488_1(BT077488|pid:none) Lepeophtheirus salmonis Pacific fo... 108 3e-22
GM977155_1(GM977155|pid:none) Sequence 63 from Patent WO20081456... 108 4e-22
BT044621_1(BT044621|pid:none) Salmo salar clone ssal-rgf-001-034... 108 4e-22
(Q05974) RecName: Full=Ras-related protein Rab-1A; &S38339(S383... 108 4e-22
Z73932_1(Z73932|pid:none) L.japonicus mRNA for small GTP-binding... 108 4e-22
M19885_1(M19885|pid:none) Bovine GTP-binding protein (smg p25A) ... 107 5e-22
CR382138_325(CR382138|pid:none) Debaryomyces hansenii strain CBS... 107 5e-22
E71440(E71440)GTP-binding protein RAB2A - Arabidopsis thaliana 107 5e-22

>(P18613) RecName: Full=Ras-related protein rapA; AltName:
Full=Ras-related protein rap-1; Flags: Precursor;
&S11229(S11229) &X54291_1(X54291|pid:none)
Length = 186

Score = 372 bits (956), Expect = e-102
Identities = 186/186 (100%), Positives = 186/186 (100%)
Frame = +3

Query: 159 MPLREFKIVVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSYRKQVEVDSNQCMLEILDT 338
MPLREFKIVVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSYRKQVEVDSNQCMLEILDT
Sbjct: 1 MPLREFKIVVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSYRKQVEVDSNQCMLEILDT 60

Query: 339 AGTEQFTAMRDLYMKNGQGFVLVYSIISNSTFNELPDLREQILRVKDCEDVPMVLVGNKC 518
AGTEQFTAMRDLYMKNGQGFVLVYSIISNSTFNELPDLREQILRVKDCEDVPMVLVGNKC
Sbjct: 61 AGTEQFTAMRDLYMKNGQGFVLVYSIISNSTFNELPDLREQILRVKDCEDVPMVLVGNKC 120

Query: 519 DLHDQRVISTEQGEELARKFGDCYFLEASAKNKVNVEQIFYNLIRQINRKNPVGPPSKAK 698
DLHDQRVISTEQGEELARKFGDCYFLEASAKNKVNVEQIFYNLIRQINRKNPVGPPSKAK
Sbjct: 121 DLHDQRVISTEQGEELARKFGDCYFLEASAKNKVNVEQIFYNLIRQINRKNPVGPPSKAK 180

Query: 699 SKCALL 716
SKCALL
Sbjct: 181 SKCALL 186

Lambda K H
0.318 0.134 0.401

Gapped
Lambda K H
0.267 0.0410 0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3236559
Number of Hits to DB: 1,242,286,168
Number of extensions: 21776321
Number of successful extensions: 72551
Number of sequences better than 10.0: 3655
Number of HSP's gapped: 67942
Number of HSP's successfully gapped: 3680
Length of query: 327
Length of database: 1,051,180,864
Length adjustment: 129
Effective length of query: 198
Effective length of database: 633,664,753
Effective search space: 125465621094
Effective search space used: 125465621094
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)

PSORT

psg: 0.58 gvh: 0.52 alm: 0.42 top: 0.53 tms: 0.00 mit: 0.24 mip: 0.00
nuc: 0.00 erl: 0.00 erm: 0.20 pox: 0.00 px2: 0.00 vac: 0.00 rnp: 0.00
act: 0.00 caa: 1.00 yqr: 0.00 tyr: 0.00 leu: 0.00 gpi: 0.00 myr: 0.00
dna: 0.00 rib: 0.00 bac: 0.00 m1a: 0.00 m1b: 0.00 m2 : 0.00 mNt: 0.00
m3a: 0.00 m3b: 0.00 m_ : 1.00

28.0 %: cytoplasmic
20.0 %: plasma membrane
16.0 %: nuclear
12.0 %: extracellular, including cell wall
8.0 %: Golgi
8.0 %: vesicles of secretory system
4.0 %: mitochondrial
4.0 %: peroxisomal

>> prediction for Contig-U14071-1 is cyt

VS (DIR, S) 1
VH (FL, L) 0
VF (FL, S) 0
AH (FL, L) 1
AF (FL, S) 0
SL (DIR, L) 0
SS (DIR, S) 13
SH (FL, L) 0
SF (FL, S) 0
CH (FL, L) 0
CF (FL, S) 0
FCL (DIR, L) 0
FC (DIR, S) 0
FC-IC (SUB) 0