Contig-U02442-1
Contig ID Contig-U02442-1
Contig update 2001. 8.29
Contig sequence
>Contig-U02442-1 (Contig-U02442-1Q) /CSM_Contig/Contig-U02442-1Q.Seq.d
AATAAAACAAATAAATTTTCAATGAAGGAAGAACAAAGAGATTTATATTC
ATTAATTATAAATCAATTAGTACATGATGGATATTTGAATGAAGCGACTA
AAATTAGTGAATCTACAATGATACCATGTCCAATTAAAGGAGAGGCGAGT
AATAAATTATTTTCATTGTATCAATCTACTATATCAGGCAGTGGTGGATT
AGGTATGCATAGTGGAATTAATAGAGTAAACTCAAATATGGATATAGATG
ATGATTCAAGTACAATAGGATCAAGTGGTGGTAAAAATTCAATTGAAGAT
ATTATAAATATGAAAGAATGTTTAGATTTTGATGATCCAATACAACAACA
ACAATTAATAACTGGTAGTAGCAGTACTTCAACCACTGCCACCACCACCA
CTACTAGCAGTAGTAGTAGTAGTAGTACAAGTGACGGTACAACAAATACA
ACAGGAATTATAACTGAAAAAGTACAACAACAACAATTACAACCAAATTT
TATAACGAAATTTATTACAACTCATAAAAATGCATGTAGATGTGCAAAAT
TTAGTTGGGATGGTAAATATGTAGCAACAGGGTCATCAGATACATCAATT
AAATTATTAGATGTTAATAAGATGAGAAATTATAATCAAACAAAGAATGA
AACCACTGAAGATTCAGCACCATCAAGACCAGTGTTAAGAACATTTTATG
ATCATACGATGCCAATTAATGATTTAGATTTTCATCCATCAGCACCCATT
CTATCATCGGCATCAAAAGATGGTACTATTAGATTCTACGATTATAAATC
ATCATTAAAACGTTCATTTAAATATATACAAGATACTCATGGTATACGTT
CAATCAATTTTCATCCATGTGGTGATTTAATATTGGCTGGCACTGATCAC
CAAATGATTAGACTTTACAATGTAAATACATTTCAATCATTCACAGCAAG
AAAGATCAATGAACATCATCATGGTCCAATCAACCAAGTTAGGTTCTCAC
TGGATGGTAATATCTTTGCAAGTTGTTCAAAAGATAATACAATCAAAATT
TGGGATTCAAATAATTTTAGTTTAATTTCAACTTTAAATTCACCCCATGG
TGGTAAAGAACCAACTACCGTTCAAATTAGTAGGAATCAAAAATACCTCT
TATCATGTGGTCGTGATTCAATGATTAAACTATGGGAGATTACTTCAGGT
CGTTTGATCTATAGTATCAGTACAGGTGTAAATCAAAGTGGTGGTCAAAA
TAAAAATAGAATCTCTGCAACCTTTAATTATACTGAAGATTATATCATAA
CAAATGATGAACAACCCTCTGTCGCTGTGGTTTACAATTCAAGAACAAAA
GAACAAGTTCAAAAATTAACTGGTCATAATAATACTGTTCGTTATATTGC
TGCCTCACCAGTTGAAAATGCTTTAATGACATGTAGTTTAGATCATAGAG
GTAGATTTGGACTGAGATACTTTATCTTTATCTTCAAATCCAAT

Gap no gap
Contig length 1494
Chromosome number (1..6, M) 3
Chromosome length 6358359
Start point 1133728
End point 1135223
Strand (PLUS/MINUS) PLUS
Number of clones 4
Number of EST 6
Link to clone list U02442
List of clone(s)

est1=AFB540F,1,633
est2=VFD426F,6,601
est3=SFE373Z,559,1144
est4=SFE173Z,745,1144
est5=VFD426Z,784,1494
est6=AFB540Z,832,1494
Translated Amino Acid sequence
NKTNKFSMKEEQRDLYSLIINQLVHDGYLNEATKISESTMIPCPIKGEASNKLFSLYQST
ISGSGGLGMHSGINRVNSNMDIDDDSSTIGSSGGKNSIEDIINMKECLDFDDPIQQQQLI
TGSSSTSTTATTTTTSSSSSSSTSDGTTNTTGIITEKVQQQQLQPNFITKFITTHKNACR
CAKFSWDGKYVATGSSDTSIKLLDVNKMRNYNQTKNETTEDSAPSRPVLRTFYDHTMPIN
DLDFHPSAPILSSASKDGTIRFYDYKSSLKRSFKYIQDTHGIRSINFHPCGDLILAGTDH
QMIRLYNVNTFQSFTARKINEHHHGPINQVRFSLDGNIFASCSKDNTIKIWDSNNFSLIS
TLNSPHGGKEPTTVQISRNQKYLLSCGRDSMIKLWEITSGRLIYSISTGVNQSGGQNKNR
ISATFNYTEDYIITNDEQPSVAVVYNSRTKEQVQKLTGHNNTVRYIAASPVENALMTCSL
DHRGRFGLRYFIFIFKSN


Translated Amino Acid sequence (All Frames)
Frame A:
NKTNKFSMKEEQRDLYSLIINQLVHDGYLNEATKISESTMIPCPIKGEASNKLFSLYQST
ISGSGGLGMHSGINRVNSNMDIDDDSSTIGSSGGKNSIEDIINMKECLDFDDPIQQQQLI
TGSSSTSTTATTTTTSSSSSSSTSDGTTNTTGIITEKVQQQQLQPNFITKFITTHKNACR
CAKFSWDGKYVATGSSDTSIKLLDVNKMRNYNQTKNETTEDSAPSRPVLRTFYDHTMPIN
DLDFHPSAPILSSASKDGTIRFYDYKSSLKRSFKYIQDTHGIRSINFHPCGDLILAGTDH
QMIRLYNVNTFQSFTARKINEHHHGPINQVRFSLDGNIFASCSKDNTIKIWDSNNFSLIS
TLNSPHGGKEPTTVQISRNQKYLLSCGRDSMIKLWEITSGRLIYSISTGVNQSGGQNKNR
ISATFNYTEDYIITNDEQPSVAVVYNSRTKEQVQKLTGHNNTVRYIAASPVENALMTCSL
DHRGRFGLRYFIFIFKSN


Frame B:
ikqinfq*rknkeiyih*l*in*ymmdi*mkrlklvnlq*yhvqlkerrvinyfhcinll
yqavvd*vcivelie*tqiwi*mmiqvq*dqvvvkiqlkil*i*knv*ilmiqynnnn**
lvvavlqplppppllavvvvvvqvtvqqiqqel*lkkynnnnynqil*rnllqlikmhvd
vqnlvgmvnm*qqghqihqlny*mlir*eiiikqrmkplkiqhhqdqc*ehfmiircqlm
i*ifihqhpfyhrhqkmvlldstiinhh*nvhlniykilmvyvqsifihvvi*ywlalit
k*ldftm*ihfnhsqqersmniimvqstklgshwmvislqvvqkiiqskfgiqiilv*fq
l*ihpmvvknqlpfklvgikntsyhvvviq*lnygrllqvv*sivsvqv*ikvvvkikie
slqpliilkiis*qmmnnplslwftiqeqknkfkn*lviiilfvillphqlkml**hvv*
iievdld*dtlslssnp


Frame C:
*nk*ifnegrtkrfifinyksist*wife*sd*n**iyndtmsn*rrge**iifivsiyy
irqwwirya*wn**sklkygyr**fkynrikww*kfn*ryykyermfrf**snttttinn
w**qyfnhchhhhy*q*****yk*rynkynrnyn*ksttttittkfyneiyyns*kcm*m
cki*lgw*icsnrviryin*iirc**dekl*snke*nh*rfstiktsvknil*sydan**
frfssisthsiigikrwyy*ilrl*iiiktfi*iytryswytfnqfssmw*fnigwh*sp
nd*tlqckyisiihskkdq*tsswsnqps*vltgw*ylcklfkr*ynqnlgfk*f*fnfn
fkftpww*rtnyrsn**eskiplimws*fnd*tmgdyfrsfdl*yqyrckskwwsk*k*n
lcnl*ly*rlyhnk**ttlcrcglqfknkrtsskinws**ycslycclts*kcfndm*fr
s*r*iwteilylylqiq


own update 2004. 6. 9
Homology vs CSM-cDNA
Query= Contig-U02442-1 (Contig-U02442-1Q)
/CSM_Contig/Contig-U02442-1Q.Seq.d
(1494 letters)

Database: CSM
6905 sequences; 5,674,871 total letters


Score E
Sequences producing significant alignments: (bits) Value

Contig-U02442-1 (Contig-U02442-1Q) /CSM_Contig/Conti... 2115 0.0
Contig-U10341-1 (Contig-U10341-1Q) /CSM_Contig/Conti... 46 1e-04
Contig-U12014-1 (Contig-U12014-1Q) /CSM_Contig/Conti... 44 4e-04
Contig-U11525-1 (Contig-U11525-1Q) /CSM_Contig/Conti... 44 4e-04
Contig-U07546-1 (Contig-U07546-1Q) /CSM_Contig/Conti... 44 4e-04
Contig-U13841-1 (Contig-U13841-1Q) /CSM_Contig/Conti... 42 0.002
Contig-U10975-1 (Contig-U10975-1Q) /CSM_Contig/Conti... 42 0.002
Contig-U02520-1 (Contig-U02520-1Q) /CSM_Contig/Conti... 42 0.002
Contig-U14691-1 (Contig-U14691-1Q) /CSM_Contig/Conti... 40 0.007
Contig-U13909-1 (Contig-U13909-1Q) /CSM_Contig/Conti... 40 0.007

>Contig-U02442-1 (Contig-U02442-1Q) /CSM_Contig/Contig-U02442-1Q.Seq.d
Length = 1494

Score = 2115 bits (1067), Expect = 0.0
Identities = 1067/1067 (100%)
Strand = Plus / Plus


Query: 428 caagtgacggtacaacaaatacaacaggaattataactgaaaaagtacaacaacaacaat 487
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 caagtgacggtacaacaaatacaacaggaattataactgaaaaagtacaacaacaacaat 487


Query: 488 tacaaccaaattttataacgaaatttattacaactcataaaaatgcatgtagatgtgcaa 547
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 488 tacaaccaaattttataacgaaatttattacaactcataaaaatgcatgtagatgtgcaa 547


Query: 548 aatttagttgggatggtaaatatgtagcaacagggtcatcagatacatcaattaaattat 607
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 548 aatttagttgggatggtaaatatgtagcaacagggtcatcagatacatcaattaaattat 607


Query: 608 tagatgttaataagatgagaaattataatcaaacaaagaatgaaaccactgaagattcag 667
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 608 tagatgttaataagatgagaaattataatcaaacaaagaatgaaaccactgaagattcag 667


Query: 668 caccatcaagaccagtgttaagaacattttatgatcatacgatgccaattaatgatttag 727
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 668 caccatcaagaccagtgttaagaacattttatgatcatacgatgccaattaatgatttag 727


Query: 728 attttcatccatcagcacccattctatcatcggcatcaaaagatggtactattagattct 787
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 728 attttcatccatcagcacccattctatcatcggcatcaaaagatggtactattagattct 787


Query: 788 acgattataaatcatcattaaaacgttcatttaaatatatacaagatactcatggtatac 847
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 788 acgattataaatcatcattaaaacgttcatttaaatatatacaagatactcatggtatac 847


Query: 848 gttcaatcaattttcatccatgtggtgatttaatattggctggcactgatcaccaaatga 907
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 848 gttcaatcaattttcatccatgtggtgatttaatattggctggcactgatcaccaaatga 907


Query: 908 ttagactttacaatgtaaatacatttcaatcattcacagcaagaaagatcaatgaacatc 967
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 908 ttagactttacaatgtaaatacatttcaatcattcacagcaagaaagatcaatgaacatc 967


Query: 968 atcatggtccaatcaaccaagttaggttctcactggatggtaatatctttgcaagttgtt 1027
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 968 atcatggtccaatcaaccaagttaggttctcactggatggtaatatctttgcaagttgtt 1027


Query: 1028 caaaagataatacaatcaaaatttgggattcaaataattttagtttaatttcaactttaa 1087
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1028 caaaagataatacaatcaaaatttgggattcaaataattttagtttaatttcaactttaa 1087


Query: 1088 attcaccccatggtggtaaagaaccaactaccgttcaaattagtaggaatcaaaaatacc 1147
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1088 attcaccccatggtggtaaagaaccaactaccgttcaaattagtaggaatcaaaaatacc 1147


Query: 1148 tcttatcatgtggtcgtgattcaatgattaaactatgggagattacttcaggtcgtttga 1207
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1148 tcttatcatgtggtcgtgattcaatgattaaactatgggagattacttcaggtcgtttga 1207


Query: 1208 tctatagtatcagtacaggtgtaaatcaaagtggtggtcaaaataaaaatagaatctctg 1267
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1208 tctatagtatcagtacaggtgtaaatcaaagtggtggtcaaaataaaaatagaatctctg 1267


Query: 1268 caacctttaattatactgaagattatatcataacaaatgatgaacaaccctctgtcgctg 1327
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1268 caacctttaattatactgaagattatatcataacaaatgatgaacaaccctctgtcgctg 1327


Query: 1328 tggtttacaattcaagaacaaaagaacaagttcaaaaattaactggtcataataatactg 1387
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1328 tggtttacaattcaagaacaaaagaacaagttcaaaaattaactggtcataataatactg 1387


Query: 1388 ttcgttatattgctgcctcaccagttgaaaatgctttaatgacatgtagtttagatcata 1447
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1388 ttcgttatattgctgcctcaccagttgaaaatgctttaatgacatgtagtttagatcata 1447


Query: 1448 gaggtagatttggactgagatactttatctttatcttcaaatccaat 1494
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1448 gaggtagatttggactgagatactttatctttatcttcaaatccaat 1494


Score = 809 bits (408), Expect = 0.0
Identities = 408/408 (100%)
Strand = Plus / Plus


Query: 1 aataaaacaaataaattttcaatgaaggaagaacaaagagatttatattcattaattata 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aataaaacaaataaattttcaatgaaggaagaacaaagagatttatattcattaattata 60


Query: 61 aatcaattagtacatgatggatatttgaatgaagcgactaaaattagtgaatctacaatg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 aatcaattagtacatgatggatatttgaatgaagcgactaaaattagtgaatctacaatg 120


Query: 121 ataccatgtccaattaaaggagaggcgagtaataaattattttcattgtatcaatctact 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ataccatgtccaattaaaggagaggcgagtaataaattattttcattgtatcaatctact 180


Query: 181 atatcaggcagtggtggattaggtatgcatagtggaattaatagagtaaactcaaatatg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 atatcaggcagtggtggattaggtatgcatagtggaattaatagagtaaactcaaatatg 240


Query: 241 gatatagatgatgattcaagtacaataggatcaagtggtggtaaaaattcaattgaagat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gatatagatgatgattcaagtacaataggatcaagtggtggtaaaaattcaattgaagat 300


Query: 301 attataaatatgaaagaatgtttagattttgatgatccaatacaacaacaacaattaata 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 attataaatatgaaagaatgtttagattttgatgatccaatacaacaacaacaattaata 360


Query: 361 actggtagtagcagtacttcaaccactgccaccaccaccactactagc 408
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 actggtagtagcagtacttcaaccactgccaccaccaccactactagc 408


Score = 34.2 bits (17), Expect = 0.42
Identities = 17/17 (100%)
Strand = Plus / Plus


Query: 341 tacaacaacaacaatta 357
|||||||||||||||||
Sbjct: 473 tacaacaacaacaatta 489


Score = 34.2 bits (17), Expect = 0.42
Identities = 17/17 (100%)
Strand = Plus / Plus


Query: 473 tacaacaacaacaatta 489
|||||||||||||||||
Sbjct: 341 tacaacaacaacaatta 357


>Contig-U10341-1 (Contig-U10341-1Q) /CSM_Contig/Contig-U10341-1Q.Seq.d
Length = 1179

Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Minus


Query: 384 cactgccaccaccaccactacta 406
|||||||||||||||||||||||
Sbjct: 357 cactgccaccaccaccactacta 335


Score = 32.2 bits (16), Expect = 1.7
Identities = 16/16 (100%)
Strand = Plus / Minus


Query: 388 gccaccaccaccacta 403
||||||||||||||||
Sbjct: 809 gccaccaccaccacta 794


Score = 30.2 bits (15), Expect = 6.5
Identities = 15/15 (100%)
Strand = Plus / Plus


Query: 338 caatacaacaacaac 352
|||||||||||||||
Sbjct: 482 caatacaacaacaac 496


>Contig-U12014-1 (Contig-U12014-1Q) /CSM_Contig/Contig-U12014-1Q.Seq.d
Length = 1817

Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus


Query: 474 acaacaacaacaattacaacca 495
||||||||||||||||||||||
Sbjct: 64 acaacaacaacaattacaacca 85


Score = 34.2 bits (17), Expect = 0.42
Identities = 17/17 (100%)
Strand = Plus / Plus


Query: 474 acaacaacaacaattac 490
|||||||||||||||||
Sbjct: 304 acaacaacaacaattac 320


Score = 34.2 bits (17), Expect = 0.42
Identities = 20/21 (95%)
Strand = Plus / Plus


Query: 337 ccaatacaacaacaacaatta 357
|||| ||||||||||||||||
Sbjct: 299 ccaacacaacaacaacaatta 319


Score = 32.2 bits (16), Expect = 1.7
Identities = 16/16 (100%)
Strand = Plus / Plus


Query: 342 acaacaacaacaatta 357
||||||||||||||||
Sbjct: 64 acaacaacaacaatta 79


Database: CSM
Posted date: Jun 9, 2004 7:35 PM
Number of letters in database: 5,674,871
Number of sequences in database: 6905

Lambda K H
1.37 0.711 1.31

Gapped
Lambda K H
1.37 0.711 1.31


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 39,957
Number of Sequences: 6905
Number of extensions: 39957
Number of successful extensions: 11895
Number of sequences better than 10.0: 628
length of query: 1494
length of database: 5,674,871
effective HSP length: 16
effective length of query: 1478
effective length of database: 5,564,391
effective search space: 8224169898
effective search space used: 8224169898
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 15 (30.2 bits)
dna update 2009. 5.17
Homology vs DNA
Query= Contig-U02442-1 (Contig-U02442-1Q) /CSM_Contig/Contig-U02442-1Q.Seq.d
(1494 letters)

Database: ddbj_A
102,105,510 sequences; 101,790,757,118 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value N

(BJ340931) Dictyostelium discoideum cDNA clone:dda4o09, 3' e... 1271 0.0 2
(BJ430441) Dictyostelium discoideum cDNA clone:ddv7d08, 3' e... 1211 0.0 3
(BJ400321) Dictyostelium discoideum cDNA clone:dds9b19, 3' e... 1162 0.0 1
(BJ324039) Dictyostelium discoideum cDNA clone:dda4o09, 5' e... 809 0.0 2
(BJ412189) Dictyostelium discoideum cDNA clone:ddv7d08, 5' e... 799 0.0 2
(BJ400317) Dictyostelium discoideum cDNA clone:dds9a19, 3' e... 787 0.0 1
(AC116986) Dictyostelium discoideum chromosome 2 map 2234041... 36 0.002 13
(AM729338) Cucumis melo subsp. agrestis EST, clone A_07-C04-... 44 0.004 2
(AC114263) Dictyostelium discoideum chromosome 2 map 215673-... 36 0.024 12
(CR382401) Plasmodium falciparum chromosome 6, complete sequ... 42 0.040 15
(AC178149) Strongylocentrotus purpuratus clone R3-3078O5, WO... 42 0.045 6
(AE014834) Plasmodium falciparum 3D7 chromosome 10 section 6... 40 0.053 11
(AC115599) Dictyostelium discoideum chromosome 2 map 4229098... 46 0.061 8
(CP000942) Ureaplasma parvum serovar 3 str. ATCC 27815, comp... 40 0.084 17
(AF222894) Ureaplasma parvum serovar 3 str. ATCC 700970, com... 40 0.084 17
(AM439622) Vitis vinifera contig VV78X016309.5, whole genome... 42 0.15 3
(AM449385) Vitis vinifera contig VV78X142674.5, whole genome... 42 0.15 4
(AC116920) Dictyostelium discoideum chromosome 2 map 4415041... 40 0.21 8
(CP000726) Clostridium botulinum A str. ATCC 19397, complete... 34 0.22 23
(AC117176) Dictyostelium discoideum chromosome 2 map 5018074... 34 0.23 13
(FM992690) Candida dubliniensis CD36 chromosome 3, complete ... 38 0.26 15
(FF560642) MUSRD24TF MUSR Musa acuminata cDNA 5', mRNA seque... 40 0.29 2
(AC117075) Dictyostelium discoideum chromosome 2 map 5201047... 44 0.43 11
(AC181279) Strongylocentrotus purpuratus clone R3-4015J17, W... 36 0.43 7
(AC117072) Dictyostelium discoideum chromosome 2 map 3879572... 34 0.44 11
(DU895276) 422493 Tomato HindIII BAC Library Solanum lycoper... 32 0.47 4
(AC116977) Dictyostelium discoideum chromosome 2 map 5515173... 38 0.52 11
(AL929291) Zebrafish DNA sequence from clone CH211-189P10 in... 34 0.55 2
(AC116984) Dictyostelium discoideum chromosome 2 map 2567470... 34 0.55 15
(AL360354) Plasmodium vivax telomeric YAC clone, complete fi... 38 0.56 8
(AC193536) Pan troglodytes BAC clone CH251-655L15 from chrom... 48 0.58 4
(CU638698) Zebrafish DNA sequence from clone CH1073-202I11 i... 38 0.59 2
(DJ386684) Diagnosis of Diseases Associated with Metastasis. 38 0.66 3
(DD391916) Method and nucleic acids for the improved treatme... 38 0.66 3
(DD391642) Method and nucleic acids for the improved treatme... 38 0.66 3
(DD209277) test. 38 0.66 3
(DD209149) test. 38 0.66 3
(CQ807172) Sequence 622 from Patent WO2004035803. 38 0.66 3
(CQ806898) Sequence 348 from Patent WO2004035803. 38 0.66 3
(AX826114) Sequence 366 from Patent WO03072821. 38 0.66 3
(AX825986) Sequence 238 from Patent WO03072821. 38 0.66 3
(AX822474) Sequence 366 from Patent EP1340818. 38 0.66 3
(AX822346) Sequence 238 from Patent EP1340818. 38 0.66 3
(AX795950) Sequence 293 from Patent WO03052135. 38 0.66 3
(AX795834) Sequence 177 from Patent WO03052135. 38 0.66 3
(AX348832) Sequence 290 from Patent WO0202807. 38 0.66 3
(AX346709) Sequence 1780 from Patent WO0200928. 38 0.66 3
(AX281480) Sequence 144 from Patent WO0177376. 38 0.66 3
(AC021876) Homo sapiens BAC clone GS1-117B4 from 7, complete... 48 0.69 3
(AC217790) Medicago truncatula chromosome 2 clone mte1-82a7,... 38 0.73 5
(FM992695) Candida dubliniensis CD36 chromosome R, complete ... 36 0.76 16
(AC124049) Rattus norvegicus clone CH230-59I21, *** SEQUENCI... 46 0.82 3
(AC147714) Medicago truncatula clone mth2-138b2, WORKING DRA... 48 0.99 1
(AC107339) Rattus norvegicus clone CH230-138F16, WORKING DRA... 48 0.99 1
(AC106694) Rattus norvegicus clone CH230-65G2, *** SEQUENCIN... 48 0.99 1
(AC098109) Rattus norvegicus clone CH230-126I13, *** SEQUENC... 48 0.99 1
(AC097948) Rattus norvegicus clone CH230-128H21, *** SEQUENC... 48 0.99 1
(CU012039) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 48 0.99 1
(DU286667) 1098448339057 CHORI-243 Ovis aries genomic clone ... 48 0.99 1
(CT438129) Sus scrofa genomic clone CH242-342F5, genomic sur... 48 0.99 1
(DW628405) CLJ354-A09.x1d-t SHGC-CLJ2 Gasterosteus aculeatus... 48 0.99 1
(AE013070) Thermoanaerobacter tengcongensis MB4, section 97 ... 48 0.99 1
(EF568108) Glossina pallidipes salivary gland hypertrophy vi... 32 1.1 10
(EJ511653) 1095407096143 Global-Ocean-Sampling_GS-28-01-01-1... 36 1.2 2
(CZ278891) cp02f03.f Candida parapsilosis Random Genomic Lib... 44 1.3 2
(EJ313467) 1095403251797 Global-Ocean-Sampling_GS-27-01-01-1... 36 1.4 2
(AY098937) Plasmodium falciparum RNA-binding protein Puf1 mR... 36 1.5 4
(AC210448) Oryza glaberrima clone OG_BBa0010N13, *** SEQUENC... 36 1.7 5
(AL035475) Plasmodium falciparum MAL4P2. 32 1.8 11
(AC125745) Rattus norvegicus clone CH230-21A4, *** SEQUENCIN... 36 1.9 2
(CR354440) Zebrafish DNA sequence from clone DKEYP-100B9 in ... 36 2.0 2
(CP000727) Clostridium botulinum A str. Hall, complete genome. 34 2.1 23
(CU539059) Zebrafish DNA sequence from clone CH1073-386G6 in... 36 2.3 2
(EF647602) Solanum lycopersicum chromosome 9 clone C09HBa010... 32 2.3 9
(AC232397) Brassica rapa subsp. pekinensis clone KBrH007D13,... 36 2.5 7
(AC212651) Solanum lycopersicum chromosome 7 clone C07SLm003... 38 2.5 5
(BJ438079) Dictyostelium discoideum cDNA clone:ddv36e10, 3' ... 36 2.6 2
(AC119749) Homo sapiens chromosome 1 clone RP11-444C12, comp... 38 2.6 7
(BJ419498) Dictyostelium discoideum cDNA clone:ddv36e10, 5' ... 36 2.7 2
(AC232454) Brassica rapa subsp. pekinensis clone KBrB018D16,... 36 3.2 7
(FM992691) Candida dubliniensis CD36 chromosome 4, complete ... 36 3.3 11
(AC216424) Solanum lycopersicum chromosome 7 clone C07HBa017... 34 3.3 6
(AC210402) Saimiri boliviensis boliviensis clone CH254-373L2... 40 3.3 6
(AM412317) Clostridium botulinum A str. ATCC 3502 complete g... 34 3.4 23
(DX483658) Cpl25355 Papaya Genomic DNA BAC Library Carica pa... 36 3.5 2
(BX293980) Mycoplasma mycoides subsp. mycoides SC str. PG1, ... 34 3.5 18
(CU468271) Zebrafish DNA sequence from clone CH73-350K19 in ... 46 3.9 1
(BC168027) Xenopus tropicalis cDNA clone MGC:185134 IMAGE:76... 46 3.9 1
(BV230371) S233P6136RE4.T0 LabradorRetriever Canis familiari... 46 3.9 1
(AL928957) Mouse DNA sequence from clone RP23-75E19 on chrom... 46 3.9 1
(AC175118) Mus musculus chromosome 1, clone wi1-2169I10, com... 46 3.9 1
(AC164557) Mus musculus BAC clone RP23-282G1 from chromosome... 46 3.9 1
(AC145556) Mus musculus BAC clone RP23-308E7 from chromosome... 46 3.9 1
(AC125400) Mus musculus BAC clone RP24-380E10 from chromosom... 46 3.9 1
(AC104542) Mus musculus chromosome 1, clone RP23-165D11, com... 46 3.9 1
(AP010330) Lotus japonicus genomic DNA, chromosome 1, clone:... 46 3.9 1
(AF296834) Arabidopsis thaliana BAC F22D1. 46 3.9 1
(AC115608) Dictyostelium discoideum chromosome 2 map 6199819... 46 3.9 1
(AL445933) Human DNA sequence from clone RP11-486B10 on chro... 46 3.9 1
(AC060765) Homo sapiens chromosome 8, clone RP11-653B10, com... 46 3.9 1
(AC012619) Homo sapiens chromosome 5 clone CTD-2022K1, compl... 46 3.9 1
(AC161415) Mus musculus clone CH36-95K7, *** SEQUENCING IN P... 46 3.9 1
(AC141997) Rattus norvegicus clone CH230-296H12, *** SEQUENC... 46 3.9 1
(AC138600) Mus musculus chromosome 1 clone RP24-405L19 map 1... 46 3.9 1
(AC137118) Mus musculus clone RP23-245D4, WORKING DRAFT SEQU... 46 3.9 1
(AC136548) Rattus norvegicus clone CH230-154H13, *** SEQUENC... 46 3.9 1
(AC131355) Rattus norvegicus clone CH230-289D4, WORKING DRAF... 46 3.9 1
(AC125704) Rattus norvegicus clone CH230-12C10, WORKING DRAF... 46 3.9 1
(AC123415) Rattus norvegicus clone CH230-159P3, *** SEQUENCI... 46 3.9 1
(AC118956) Rattus norvegicus clone CH230-387D11, WORKING DRA... 46 3.9 1
(AC115557) Rattus norvegicus clone CH230-112J24, *** SEQUENC... 46 3.9 1
(AC113792) Rattus norvegicus clone CH230-245C9, *** SEQUENCI... 46 3.9 1
(AC111934) Rattus norvegicus clone CH230-156C15, WORKING DRA... 46 3.9 1
(AC103344) Rattus norvegicus clone CH230-2F11, *** SEQUENCIN... 46 3.9 1
(AC095848) Rattus norvegicus clone CH230-9P7, *** SEQUENCING... 46 3.9 1
(AC094568) Rattus norvegicus clone CH230-4J8, *** SEQUENCING... 46 3.9 1
(CU928623) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 46 3.9 1
(AC094128) Rattus norvegicus clone CH230-3D9, *** SEQUENCING... 46 3.9 1
(AP010602) Lotus japonicus genomic DNA, chromosome 1, clone:... 46 3.9 1
(AL354974) Human DNA sequence *** SEQUENCING CANCELLED *** f... 46 3.9 1
(AC215955) Pteropus vampyrus clone CH279-346B1, WORKING DRAF... 46 3.9 1
(AC214726) Pteropus vampyrus clone CH279-8E6, WORKING DRAFT ... 46 3.9 1
(AC203781) Zea mays chromosome 3 clone CH201-419B10; ZMMBBc0... 46 3.9 1
(AC189281) Zea mays chromosome 3 clone CH201-166O20; ZMMBBc0... 46 3.9 1
(AC179707) Strongylocentrotus purpuratus clone R3-1021I1, WO... 46 3.9 1
(EK423904) 1095516000365 Global-Ocean-Sampling_GS-31-01-01-1... 46 3.9 1
(EJ579874) 1092960147104 Global-Ocean-Sampling_GS-29-01-01-1... 46 3.9 1
(EJ570807) 1092960038345 Global-Ocean-Sampling_GS-29-01-01-1... 46 3.9 1
(DX492986) Cpl34816 Papaya Genomic DNA BAC Library Carica pa... 46 3.9 1
(DE600856) Bombyx mori genomic DNA, Fosmid clone:GBMFno260_g... 46 3.9 1
(EL868310) CBXT21741.b1 NICHD_XGC_trop_25 Xenopus (Silurana)... 46 3.9 1
(EL727496) CBSS7442.fwd NICHD_XGC_tropSp1 Xenopus (Silurana)... 46 3.9 1
(DY549054) AGENCOURT_69587479 NICHD_XGC_Emb10 Xenopus laevis... 46 3.9 1
(DC063279) Xenopus laevis NBRP cDNA clone:xlk157h20ex, 5' end. 46 3.9 1
(DC029787) Xenopus laevis NBRP cDNA clone:rxlk157h20ex, 3' end. 46 3.9 1
(DC029749) Xenopus laevis NBRP cDNA clone:rxlk157f20ex, 3' end. 46 3.9 1
(CX996931) JGI_CAAQ567.fwd NIH_XGC_tropHrt1 Xenopus (Siluran... 46 3.9 1
(CX937702) JGI_CAAO5618.fwd NIH_XGC_tropTe5 Xenopus (Siluran... 46 3.9 1
(CX345857) JGI_XZT43300.fwd NIH_XGC_tropTad5 Xenopus (Silura... 46 3.9 1
(CX341294) JGI_XZT45696.fwd NIH_XGC_tropTad5 Xenopus (Silura... 46 3.9 1
(CX339217) JGI_XZT60707.fwd NIH_XGC_tropTad5 Xenopus (Silura... 46 3.9 1
(CR426426) Xenopus tropicalis EST, clone TTbA034h13 5'. 46 3.9 1
(CN075641) EC2BBA10CE06.g1 Xenopus tropicalis xtbs plasmid l... 46 3.9 1
(CF148086) AGENCOURT_14927960 NICHD_XGC_Emb7 Xenopus (Silura... 46 3.9 1
(CD297606) StrPu691.009001 Sea urchin larva cDNA library MPM... 46 3.9 1
(BJ414232) Dictyostelium discoideum cDNA clone:ddv18a14, 5' ... 46 3.9 1
(BJ353727) Dictyostelium discoideum cDNA clone:dda51a08, 3' ... 46 3.9 1
(BJ091738) Xenopus laevis cDNA clone:XL101d22, 3' end, singl... 46 3.9 1
(BG161660) de41g05.x1 Wellcome CRC pRN3 dorsal lip Xenopus l... 46 3.9 1
(FF083912) CPAD-aaa01g05.b1 PB2801_EST_CPAD1 Caenorhabditis ... 46 3.9 1
(DQ366716) Uncultured Prochlorococcus marinus clone ASNC2388... 46 3.9 1
(CP000962) Clostridium botulinum A3 str. Loch Maree, complet... 36 4.0 21
(GE908913) 9553023_D24.ab1_c Past_norm2007 Porites astreoide... 36 4.0 2
(GE906304) 9331023_C01.ab1_c Past_norm2007 Porites astreoide... 36 4.4 2
(AF474409) Procambarus clarkii CHH-like protein precursor, g... 38 5.0 4
(EK338612) 1095467051977 Global-Ocean-Sampling_GS-31-01-01-1... 38 5.0 2
(AR546379) Sequence 1510 from patent US 6747137. 36 5.1 2
(AX458612) Sequence 158 from Patent WO0246454. 38 5.3 2
(CR774194) Zebrafish DNA sequence from clone DKEYP-11A2 in l... 36 5.4 8
(EJ465679) 1095390205952 Global-Ocean-Sampling_GS-28-01-01-1... 38 5.5 2
(CZ515014) GMW2-86M23a.g1 GMW2 Glycine max genomic, genomic ... 40 5.5 2
(AE014841) Plasmodium falciparum 3D7 chromosome 11 section 6... 40 6.4 10
(AC176656) Strongylocentrotus purpuratus clone R3-3081O23, W... 40 6.6 5
(AC098223) Rattus norvegicus clone CH230-26F15, WORKING DRAF... 34 7.0 2
(CT868714) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 34 7.1 2
(AC233775) Solanum lycopersicum chromosome 2 clone C02SLe012... 34 7.2 2
(BX571794) Zebrafish DNA sequence from clone DKEY-246M18 in ... 34 7.2 2
(AC116305) Dictyostelium discoideum chromosome 2 map 1005175... 34 7.2 12
(AC107005) Rattus norvegicus clone CH230-270O23, WORKING DRA... 34 7.2 2
(BB098025) Mus musculus 12 days embryo embryonic body betwee... 40 7.2 2
(FM992693) Candida dubliniensis CD36 chromosome 6, complete ... 38 7.4 15
(AE014832) Plasmodium falciparum 3D7 chromosome 10 section 4... 34 7.5 10
(DQ923326) Homo sapiens orphan nuclear receptor (NR1I2) gene... 42 8.1 4
(DQ911122) Homo sapiens orphan nuclear receptor (NR1I2) gene... 42 8.1 4
(AF364606) Homo sapiens orphan nuclear receptors (NR1I2) gen... 42 8.1 4
(CR954196) Medicago truncatula chromosome 5 clone mth2-157e5... 36 8.4 5
(AC233140) Medicago truncatula clone mth2-189i1, WORKING DRA... 40 8.5 9
(AE014847) Plasmodium falciparum 3D7 chromosome 12, section ... 34 8.8 12
(EV840482) TT1EC37TV Tetrahymena thermophila SB210 cDNA libr... 34 9.0 3
(AL929353) Plasmodium falciparum strain 3D7, chromosome 5, s... 36 9.3 11
(CT425567) Sus scrofa genomic clone CH242-364E18, genomic su... 34 9.7 2
(AC116957) Dictyostelium discoideum chromosome 2 map 1685067... 32 9.9 14

>(BJ340931) Dictyostelium discoideum cDNA clone:dda4o09, 3' end,
single read.
Length = 663

Score = 1271 bits (641), Expect(2) = 0.0
Identities = 641/641 (100%)
Strand = Plus / Minus


Query: 832 gatactcatggtatacgttcaatcaattttcatccatgtggtgatttaatattggctggc 891
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 663 gatactcatggtatacgttcaatcaattttcatccatgtggtgatttaatattggctggc 604


Query: 892 actgatcaccaaatgattagactttacaatgtaaatacatttcaatcattcacagcaaga 951
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 603 actgatcaccaaatgattagactttacaatgtaaatacatttcaatcattcacagcaaga 544


Query: 952 aagatcaatgaacatcatcatggtccaatcaaccaagttaggttctcactggatggtaat 1011
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 543 aagatcaatgaacatcatcatggtccaatcaaccaagttaggttctcactggatggtaat 484


Query: 1012 atctttgcaagttgttcaaaagataatacaatcaaaatttgggattcaaataattttagt 1071
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 483 atctttgcaagttgttcaaaagataatacaatcaaaatttgggattcaaataattttagt 424


Query: 1072 ttaatttcaactttaaattcaccccatggtggtaaagaaccaactaccgttcaaattagt 1131
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 423 ttaatttcaactttaaattcaccccatggtggtaaagaaccaactaccgttcaaattagt 364


Query: 1132 aggaatcaaaaatacctcttatcatgtggtcgtgattcaatgattaaactatgggagatt 1191
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 363 aggaatcaaaaatacctcttatcatgtggtcgtgattcaatgattaaactatgggagatt 304


Query: 1192 acttcaggtcgtttgatctatagtatcagtacaggtgtaaatcaaagtggtggtcaaaat 1251
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 303 acttcaggtcgtttgatctatagtatcagtacaggtgtaaatcaaagtggtggtcaaaat 244


Query: 1252 aaaaatagaatctctgcaacctttaattatactgaagattatatcataacaaatgatgaa 1311
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 243 aaaaatagaatctctgcaacctttaattatactgaagattatatcataacaaatgatgaa 184


Query: 1312 caaccctctgtcgctgtggtttacaattcaagaacaaaagaacaagttcaaaaattaact 1371
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 183 caaccctctgtcgctgtggtttacaattcaagaacaaaagaacaagttcaaaaattaact 124


Query: 1372 ggtcataataatactgttcgttatattgctgcctcaccagttgaaaatgctttaatgaca 1431
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123 ggtcataataatactgttcgttatattgctgcctcaccagttgaaaatgctttaatgaca 64


Query: 1432 tgtagtttagatcatagaggtagatttggactgagatactt 1472
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 63 tgtagtttagatcatagaggtagatttggactgagatactt 23

Score = 34.2 bits (17), Expect(2) = 0.0
Identities = 17/17 (100%)
Strand = Plus / Minus


Query: 1478 ttatcttcaaatccaat 1494
|||||||||||||||||
Sbjct: 19 ttatcttcaaatccaat 3

Lambda K H
1.37 0.711 1.31

Matrix: blastn matrix:1 -3
Number of Sequences: 102105510
Number of Hits to DB: 1,883,734,051
Number of extensions: 120329067
Number of successful extensions: 12351643
Number of sequences better than 10.0: 182
Length of query: 1494
Length of database: 101,790,757,118
Length adjustment: 24
Effective length of query: 1470
Effective length of database: 99,340,224,878
Effective search space: 146030130570660
Effective search space used: 146030130570660
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)

protein update 2009. 7.19
Homology vs Protein
Query= Contig-U02442-1 (Contig-U02442-1Q) /CSM_Contig/Contig-U02442-1Q.Seq.d
(1494 letters)

Database: nrp_B
3,236,559 sequences; 1,051,180,864 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value

AF503433_2(AF503433|pid:none) Sorghum bicolor BAC 170F8, complet... 290 1e-76
AP008209_2667(AP008209|pid:none) Oryza sativa (japonica cultivar... 288 3e-76
BT034477_1(BT034477|pid:none) Zea mays full-length cDNA clone ZM... 285 2e-75
AY013246_2(AY013246|pid:none) Hordeum vulgare subsp. vulgare clo... 284 5e-75
BC043798_1(BC043798|pid:none) Xenopus laevis cleavage stimulatio... 270 1e-70
(Q05048) RecName: Full=Cleavage stimulation factor 50 kDa subuni... 267 9e-70
BC126532_1(BC126532|pid:none) Bos taurus cleavage stimulation fa... 266 1e-69
BC066520_1(BC066520|pid:none) Danio rerio zgc:77560, mRNA (cDNA ... 266 2e-69
AF515696_1(AF515696|pid:none) Arabidopsis thaliana cleavage stim... 264 7e-69
AB008269_6(AB008269|pid:none) Arabidopsis thaliana genomic DNA, ... 258 4e-67
BT078084_1(BT078084|pid:none) Lepeophtheirus salmonis Pacific fo... 255 3e-66
BT081198_1(BT081198|pid:none) Caligus clemensi clone ccle-evs-50... 246 1e-63
FN314061_1(FN314061|pid:none) Schistosoma japonicum isolate Anhu... 234 5e-60
FN357405_3(FN357405|pid:none) Schistosoma mansoni genome sequenc... 234 6e-60
T21482(T21482) hypothetical protein F28C6.3 - Caenorhabditis ele... 222 2e-56
AL121914_11(AL121914|pid:none) Human DNA sequence from clone RP5... 213 1e-53
AB171315_1(AB171315|pid:none) Macaca fascicularis brain cDNA clo... 209 2e-52
FN314062_1(FN314062|pid:none) Schistosoma japonicum isolate Anhu... 179 2e-43
BC054661_1(BC054661|pid:none) Danio rerio zgc:77560, mRNA (cDNA ... 178 4e-43
AE014297_4978(AE014297|pid:none) Drosophila melanogaster chromos... 171 8e-41
CP001037_1143(CP001037|pid:none) Nostoc punctiforme PCC 73102, c... 126 2e-27
(Q5M786) RecName: Full=WD repeat-containing protein 5; &BC08100... 123 2e-26
BC077844_1(BC077844|pid:none) Xenopus laevis WD repeat domain 5,... 123 2e-26
AJ011376_1(AJ011376|pid:none) Homo sapiens mRNA for hypothetical... 122 3e-26
(Q2KIG2) RecName: Full=WD repeat-containing protein 5; &BC11265... 122 3e-26
AK144091_1(AK144091|pid:none) Mus musculus RCB-0559 K-1 . F1 cDN... 122 3e-26
BC052124_1(BC052124|pid:none) Danio rerio WD repeat domain 5, mR... 122 3e-26
EF083131_1(EF083131|pid:none) Picea sitchensis clone WS02722_J02... 121 6e-26
CR940348_298(CR940348|pid:none) Theileria annulata strain Ankara... 119 4e-25
(Q5RE95) RecName: Full=WD repeat-containing protein 5B; &CR8576... 117 8e-25
AK002149_1(AK002149|pid:none) Homo sapiens cDNA FLJ11287 fis, cl... 116 2e-24
(Q17963) RecName: Full=WD repeat-containing protein tag-125; &T... 115 4e-24
CP001037_4818(CP001037|pid:none) Nostoc punctiforme PCC 73102, c... 114 7e-24
(Q9D7H2) RecName: Full=WD repeat-containing protein 5B; &AK0092... 114 9e-24
CP001291_1144(CP001291|pid:none) Cyanothece sp. PCC 7424, comple... 113 2e-23
AM910993_287(AM910993|pid:none) Plasmodium knowlesi strain H chr... 112 5e-23
(Q93847) RecName: Full=Uncharacterized WD repeat-containing prot... 110 2e-22
AM462218_2(AM462218|pid:none) Vitis vinifera contig VV78X125617.... 110 2e-22
CP001037_1914(CP001037|pid:none) Nostoc punctiforme PCC 73102, c... 108 4e-22
AL772282_6(AL772282|pid:none) Mouse DNA sequence from clone RP23... 108 7e-22
CP000686_859(CP000686|pid:none) Roseiflexus sp. RS-1, complete g... 107 9e-22
AM778957_201(AM778957|pid:none) Microcystis aeruginosa PCC 7806 ... 107 9e-22
CP000117_1553(CP000117|pid:none) Anabaena variabilis ATCC 29413,... 107 1e-21
CP001037_1323(CP001037|pid:none) Nostoc punctiforme PCC 73102, c... 105 3e-21
AP009552_3821(AP009552|pid:none) Microcystis aeruginosa NIES-843... 105 3e-21
CP001100_2468(CP001100|pid:none) Chloroherpeton thalassium ATCC ... 105 6e-21
AK105499_1(AK105499|pid:none) Oryza sativa Japonica Group cDNA c... 104 7e-21
FN357410_12(FN357410|pid:none) Schistosoma mansoni genome sequen... 104 1e-20
AY082798_1(AY082798|pid:none) Penicillium marneffei TupA protein... 102 4e-20
AM920427_459(AM920427|pid:none) Penicillium chrysogenum Wisconsi... 102 4e-20
CP001037_5630(CP001037|pid:none) Nostoc punctiforme PCC 73102, c... 101 8e-20
AP007175_262(AP007175|pid:none) Aspergillus oryzae RIB40 genomic... 101 8e-20
AP007163_34(AP007163|pid:none) Aspergillus oryzae RIB40 genomic ... 101 8e-20
AY608603_1(AY608603|pid:none) Exophiala dermatitidis Tup1p gene,... 100 1e-19
CP000117_2804(CP000117|pid:none) Anabaena variabilis ATCC 29413,... 100 1e-19
CU074274_1(CU074274|pid:none) Podospora anserina genomic DNA, NW... 100 2e-19
AM270328_15(AM270328|pid:none) Aspergillus niger contig An15c001... 100 2e-19
AE010299_2454(AE010299|pid:none) Methanosarcina acetivorans str.... 99 3e-19
AP007164_19(AP007164|pid:none) Aspergillus oryzae RIB40 genomic ... 99 3e-19
CP000828_5861(CP000828|pid:none) Acaryochloris marina MBIC11017,... 99 4e-19
CP001037_4354(CP001037|pid:none) Nostoc punctiforme PCC 73102, c... 99 4e-19
AJ252128_1(AJ252128|pid:none) Yarrowia lipolytica tup1 gene for ... 99 4e-19
AC1842(AC1842) WD-40 repeat protein [imported] - Nostoc sp. (str... 99 5e-19
AP009552_6258(AP009552|pid:none) Microcystis aeruginosa NIES-843... 98 7e-19
CP000393_3289(CP000393|pid:none) Trichodesmium erythraeum IMS101... 97 1e-18
CP000807_36(CP000807|pid:none) Cyanothece sp. ATCC 51142 linear ... 97 1e-18
CR405685_1(CR405685|pid:none) Zebrafish DNA sequence from clone ... 97 2e-18
CP000393_1374(CP000393|pid:none) Trichodesmium erythraeum IMS101... 97 2e-18
BC008547_1(BC008547|pid:none) Mus musculus WD repeat domain 5, m... 97 2e-18
FM992688_6(FM992688|pid:none) Candida dubliniensis CD36 chromoso... 96 3e-18
BT064699_1(BT064699|pid:none) Zea mays full-length cDNA clone ZM... 96 3e-18
AM746676_8405(AM746676|pid:none) Sorangium cellulosum 'So ce 56'... 96 4e-18
CP001037_1432(CP001037|pid:none) Nostoc punctiforme PCC 73102, c... 96 4e-18
CP000393_2151(CP000393|pid:none) Trichodesmium erythraeum IMS101... 95 6e-18
CP000839_311(CP000839|pid:none) Acaryochloris marina MBIC11017 p... 95 6e-18
AK011943_1(AK011943|pid:none) Mus musculus 10 days embryo whole ... 95 6e-18
AE1810(AE1810) WD-40 repeat protein [imported] - Nostoc sp. (str... 95 6e-18
AF323585_1(AF323585|pid:none) Podospora anserina beta transducin... 95 6e-18
AD1842(AD1842) WD-40 repeat protein [imported] - Nostoc sp. (str... 94 1e-17
(Q8YTC2) RecName: Full=Uncharacterized WD repeat-containing prot... 94 1e-17
CP001037_6067(CP001037|pid:none) Nostoc punctiforme PCC 73102, c... 94 1e-17
CP000828_167(CP000828|pid:none) Acaryochloris marina MBIC11017, ... 94 1e-17
AM494970_28(AM494970|pid:none) Leishmania braziliensis chromosom... 94 1e-17
CP000117_2838(CP000117|pid:none) Anabaena variabilis ATCC 29413,... 93 2e-17
AC117075_70(AC117075|pid:none) Dictyostelium discoideum chromoso... 93 3e-17
CP000117_2617(CP000117|pid:none) Anabaena variabilis ATCC 29413,... 92 4e-17
CP001037_1947(CP001037|pid:none) Nostoc punctiforme PCC 73102, c... 92 5e-17
(O43017) RecName: Full=Set1 complex component swd3; Sho... 92 5e-17
BA000045_1965(BA000045|pid:none) Gloeobacter violaceus PCC 7421 ... 92 6e-17
CP000117_4826(CP000117|pid:none) Anabaena variabilis ATCC 29413,... 91 8e-17
(Q00808) RecName: Full=Vegetative incompatibility protein HET-E-... 91 8e-17
CT005270_29(CT005270|pid:none) Leishmania major strain Friedlin,... 91 1e-16
CP001101_2134(CP001101|pid:none) Chlorobium phaeobacteroides BS1... 91 1e-16
U57061_1(U57061|pid:none) Neurospora crassa rco-1 gene, complete... 91 1e-16
BA000045_4356(BA000045|pid:none) Gloeobacter violaceus PCC 7421 ... 90 2e-16
CP000117_2100(CP000117|pid:none) Anabaena variabilis ATCC 29413,... 90 2e-16
(P49695) RecName: Full=Probable serine/threonine-protein kinase ... 90 2e-16
CR382133_567(CR382133|pid:none) Debaryomyces hansenii strain CBS... 90 2e-16
CU074270_1(CU074270|pid:none) Podospora anserina genomic DNA, NW... 89 3e-16
(Q8BHD1) RecName: Full=WD repeat-containing protein 51B; &AK045... 89 3e-16
CP001291_2528(CP001291|pid:none) Cyanothece sp. PCC 7424, comple... 89 4e-16
CP000099_2768(CP000099|pid:none) Methanosarcina barkeri str. Fus... 89 5e-16
BT037412_1(BT037412|pid:none) Zea mays full-length cDNA clone ZM... 89 5e-16
BC056099_1(BC056099|pid:none) Xenopus laevis hypothetical protei... 89 5e-16
CP000806_3916(CP000806|pid:none) Cyanothece sp. ATCC 51142 circu... 88 7e-16
AP007169_166(AP007169|pid:none) Aspergillus oryzae RIB40 genomic... 88 7e-16
CP001287_548(CP001287|pid:none) Cyanothece sp. PCC 8801, complet... 88 7e-16
CP000119_130(CP000119|pid:none) Anabaena variabilis ATCC 29413 p... 88 9e-16
AF323583_1(AF323583|pid:none) Podospora anserina beta transducin... 88 9e-16
(Q8I0F4) RecName: Full=Lissencephaly-1 homolog; AltName: Full=Dd... 88 9e-16
BA000045_4351(BA000045|pid:none) Gloeobacter violaceus PCC 7421 ... 88 9e-16
CP000492_814(CP000492|pid:none) Chlorobium phaeobacteroides DSM ... 87 1e-15
CU074316_1(CU074316|pid:none) Podospora anserina genomic DNA, NW... 87 2e-15
FN392320_453(FN392320|pid:none) Pichia pastoris GS115 chromosome... 87 2e-15
CU640366_848(CU640366|pid:none) Podospora anserina genomic DNA c... 87 2e-15
BC075548_1(BC075548|pid:none) Xenopus tropicalis MGC89488 protei... 87 2e-15
BA000045_2888(BA000045|pid:none) Gloeobacter violaceus PCC 7421 ... 87 2e-15
CP000828_3398(CP000828|pid:none) Acaryochloris marina MBIC11017,... 87 2e-15
(Q4P9P9) RecName: Full=Nuclear distribution protein PAC1; AltNam... 86 3e-15
CP001291_1208(CP001291|pid:none) Cyanothece sp. PCC 7424, comple... 86 3e-15
BC045888_1(BC045888|pid:none) Danio rerio WD repeat domain 51A, ... 86 3e-15
AF323584_1(AF323584|pid:none) Podospora anserina beta transducin... 86 3e-15
CP000117_3846(CP000117|pid:none) Anabaena variabilis ATCC 29413,... 86 3e-15
CP000393_4067(CP000393|pid:none) Trichodesmium erythraeum IMS101... 86 4e-15
AH2154(AH2154) WD-repeat protein [imported] - Nostoc sp. (strain... 86 4e-15
AH2195(AH2195) hypothetical protein alr3119 [imported] - Nostoc ... 86 4e-15
AP009493_3398(AP009493|pid:none) Streptomyces griseus subsp. gri... 86 4e-15
AF323582_1(AF323582|pid:none) Podospora anserina beta transducin... 86 5e-15
BT065868_1(BT065868|pid:none) Zea mays full-length cDNA clone ZM... 86 5e-15
AL078635_13(AL078635|pid:none) Amycolatopsis orientalis cosmid p... 85 6e-15
CP000502_174(CP000502|pid:none) Pichia stipitis CBS 6054 chromos... 85 6e-15
AK154163_1(AK154163|pid:none) Mus musculus NOD-derived CD11c +ve... 85 8e-15
CP000393_3212(CP000393|pid:none) Trichodesmium erythraeum IMS101... 85 8e-15
CP000844_164(CP000844|pid:none) Acaryochloris marina MBIC11017 p... 85 8e-15
CP001037_139(CP001037|pid:none) Nostoc punctiforme PCC 73102, co... 85 8e-15
(Q54D08) RecName: Full=Protein LST8 homolog; AltName: Full=Letha... 84 1e-14
AY457171_1(AY457171|pid:none) Leishmania amazonensis antigenic W... 84 1e-14
BA000045_2244(BA000045|pid:none) Gloeobacter violaceus PCC 7421 ... 84 1e-14
CP000501_7(CP000501|pid:none) Pichia stipitis CBS 6054 chromosom... 84 1e-14
CP000820_1838(CP000820|pid:none) Frankia sp. EAN1pec, complete g... 84 2e-14
CP000820_6636(CP000820|pid:none) Frankia sp. EAN1pec, complete g... 84 2e-14
CU633453_76(CU633453|pid:none) Podospora anserina genomic DNA ch... 84 2e-14
CP000108_212(CP000108|pid:none) Chlorobium chlorochromatii CaD3,... 83 2e-14
AG1889(AG1889) WD-40 repeat protein [imported] - Nostoc sp. (str... 83 2e-14
(Q5RD06) RecName: Full=WD repeat-containing protein 51B; &CR858... 83 2e-14
CU640366_1076(CU640366|pid:none) Podospora anserina genomic DNA ... 83 2e-14
AK075289_1(AK075289|pid:none) Homo sapiens cDNA FLJ90808 fis, cl... 83 2e-14
AP007175_253(AP007175|pid:none) Aspergillus oryzae RIB40 genomic... 83 3e-14
AF462796_1(AF462796|pid:none) Arabidopsis thaliana At1g73720/F25... 83 3e-14
CP000393_3425(CP000393|pid:none) Trichodesmium erythraeum IMS101... 83 3e-14
AC012679_13(AC012679|pid:none) Arabidopsis thaliana chromosome 1... 83 3e-14
CP001291_5177(CP001291|pid:none) Cyanothece sp. PCC 7424, comple... 83 3e-14
AK011064_1(AK011064|pid:none) Mus musculus 13 days embryo liver ... 83 3e-14
AE016814_178(AE016814|pid:none) Ashbya gossypii (= Eremothecium ... 82 4e-14
AL832918_1(AL832918|pid:none) Homo sapiens mRNA; cDNA DKFZp762M0... 82 4e-14
CP000828_3726(CP000828|pid:none) Acaryochloris marina MBIC11017,... 82 4e-14
CP000117_2178(CP000117|pid:none) Anabaena variabilis ATCC 29413,... 82 4e-14
BT052263_1(BT052263|pid:none) Medicago truncatula clone MTYF9_FA... 82 4e-14
CP001037_1497(CP001037|pid:none) Nostoc punctiforme PCC 73102, c... 82 4e-14
CP001291_699(CP001291|pid:none) Cyanothece sp. PCC 7424, complet... 82 4e-14
AP003517_26(AP003517|pid:none) Oryza sativa Japonica Group genom... 82 4e-14
BA000045_725(BA000045|pid:none) Gloeobacter violaceus PCC 7421 D... 82 5e-14
(Q7ZUV2) RecName: Full=Katanin p80 WD40-containing subunit B1; ... 82 7e-14
EU417752_1(EU417752|pid:none) Sus scrofa pre-mRNA processing fac... 82 7e-14
CP000806_2172(CP000806|pid:none) Cyanothece sp. ATCC 51142 circu... 82 7e-14
AK315688_1(AK315688|pid:none) Homo sapiens cDNA, FLJ96786. 82 7e-14
BC110877_1(BC110877|pid:none) Homo sapiens WD repeat domain 51A,... 82 7e-14
BC119693_1(BC119693|pid:none) Homo sapiens WD repeat domain 51A,... 82 7e-14
(Q08E38) RecName: Full=Pre-mRNA-processing factor 19; AltName: F... 82 7e-14
CT573213_1700(CT573213|pid:none) Frankia alni str. ACN14A chromo... 81 9e-14
AI2493(AI2493) WD-repeat protein [imported] - Nostoc sp. (strain... 81 9e-14
CP001099_1375(CP001099|pid:none) Chlorobaculum parvum NCIB 8327,... 81 9e-14
EU591959_1(EU591959|pid:none) Sus scrofa PRP19/PSO4 pre-mRNA pro... 81 9e-14
CP000117_1538(CP000117|pid:none) Anabaena variabilis ATCC 29413,... 81 1e-13
CP001038_141(CP001038|pid:none) Nostoc punctiforme PCC 73102 pla... 81 1e-13
AM778958_177(AM778958|pid:none) Microcystis aeruginosa PCC 7806 ... 81 1e-13
(Q2TBP4) RecName: Full=WD repeat-containing protein 51A; &BC109... 81 1e-13
AK076998_1(AK076998|pid:none) Mus musculus adult male testis cDN... 80 1e-13
CP000393_1925(CP000393|pid:none) Trichodesmium erythraeum IMS101... 80 1e-13
CP000854_3359(CP000854|pid:none) Mycobacterium marinum M, comple... 80 1e-13
AB222602_1(AB222602|pid:none) Mus musculus prp19 beta mRNA, comp... 80 1e-13
CU928165_302(CU928165|pid:none) Kluyveromyces thermotolerans str... 80 1e-13
BT086255_1(BT086255|pid:none) Zea mays full-length cDNA clone ZM... 80 2e-13
AY812449_1(AY812449|pid:none) Schistosoma japonicum SJCHGC08601 ... 80 2e-13
CP000117_4653(CP000117|pid:none) Anabaena variabilis ATCC 29413,... 80 3e-13
AM920427_190(AM920427|pid:none) Penicillium chrysogenum Wisconsi... 80 3e-13
AP009552_1750(AP009552|pid:none) Microcystis aeruginosa NIES-843... 80 3e-13
AP007169_1(AP007169|pid:none) Aspergillus oryzae RIB40 genomic D... 80 3e-13
AY065425_1(AY065425|pid:none) Arabidopsis thaliana unknown prote... 79 3e-13
CP001037_5275(CP001037|pid:none) Nostoc punctiforme PCC 73102, c... 79 3e-13
FM992695_539(FM992695|pid:none) Candida dubliniensis CD36 chromo... 79 3e-13
AC022457_10(AC022457|pid:none) Oryza sativa chromosome 10 BAC OS... 79 3e-13
CP001108_1939(CP001108|pid:none) Prosthecochloris aestuarii DSM ... 79 3e-13
CP000393_3924(CP000393|pid:none) Trichodesmium erythraeum IMS101... 79 3e-13
CP000828_5196(CP000828|pid:none) Acaryochloris marina MBIC11017,... 79 4e-13
BC077273_1(BC077273|pid:none) Xenopus laevis cDNA clone IMAGE:40... 79 4e-13
AL939118_27(AL939118|pid:none) Streptomyces coelicolor A3(2) com... 79 4e-13
(Q4V7Y7) RecName: Full=Katanin p80 WD40-containing subunit B1; ... 79 4e-13
CP000117_173(CP000117|pid:none) Anabaena variabilis ATCC 29413, ... 79 4e-13
AM502224_3(AM502224|pid:none) Leishmania infantum chromosome 6. 79 4e-13
CR382124_192(CR382124|pid:none) Kluyveromyces lactis strain NRRL... 79 6e-13
CP000393_2802(CP000393|pid:none) Trichodesmium erythraeum IMS101... 79 6e-13
CP001291_1475(CP001291|pid:none) Cyanothece sp. PCC 7424, comple... 78 7e-13
AY316746_172(AY316746|pid:none) Rhizobium sp. NGR234 megaplasmid... 78 7e-13
CP000828_20(CP000828|pid:none) Acaryochloris marina MBIC11017, c... 78 7e-13
CP001344_3209(CP001344|pid:none) Cyanothece sp. PCC 7425, comple... 78 1e-12
AK147793_1(AK147793|pid:none) Mus musculus melanocyte cDNA, RIKE... 78 1e-12
(Q8W1K8) RecName: Full=Protein Mut11; AltName: Full=Mut11p; &AF... 77 1e-12
AP009552_5466(AP009552|pid:none) Microcystis aeruginosa NIES-843... 77 1e-12
CP000686_3299(CP000686|pid:none) Roseiflexus sp. RS-1, complete ... 77 1e-12
CP000828_5917(CP000828|pid:none) Acaryochloris marina MBIC11017,... 77 1e-12
BT059738_1(BT059738|pid:none) Salmo salar clone ssal-rgf-521-021... 77 1e-12
CP000828_160(CP000828|pid:none) Acaryochloris marina MBIC11017, ... 77 1e-12
AY174059_1(AY174059|pid:none) Plasmodium falciparum activated pr... 77 2e-12
CP000828_5338(CP000828|pid:none) Acaryochloris marina MBIC11017,... 77 2e-12
CP001037_6(CP001037|pid:none) Nostoc punctiforme PCC 73102, comp... 77 2e-12
(Q8BG40) RecName: Full=Katanin p80 WD40-containing subunit B1; ... 77 2e-12
(Q9BVA0) RecName: Full=Katanin p80 WD40-containing subunit B1; ... 77 2e-12
AK010364_1(AK010364|pid:none) Mus musculus ES cells cDNA, RIKEN ... 77 2e-12
(Q6NRT3) RecName: Full=WD40 repeat-containing protein SMU1; AltN... 77 2e-12
BC149991_1(BC149991|pid:none) Bos taurus katanin p80 (WD repeat ... 77 2e-12
AF339501_1(AF339501|pid:none) Pichia angusta alpha-COP-like prot... 77 2e-12
AY463620_1(AY463620|pid:none) Arabidopsis thaliana TAF5 (At5g251... 77 2e-12
AK031630_1(AK031630|pid:none) Mus musculus 13 days embryo male t... 77 2e-12
AK167824_1(AK167824|pid:none) Mus musculus CRL-1722 L5178Y-R cDN... 77 2e-12
AY891382_1(AY891382|pid:none) Synthetic construct Homo sapiens c... 77 2e-12
CR380959_230(CR380959|pid:none) Candida glabrata strain CBS138 c... 77 2e-12
AL929352_24(AL929352|pid:none) Plasmodium falciparum strain 3D7,... 76 3e-12
AJ719544_1(AJ719544|pid:none) Gallus gallus mRNA for hypothetica... 76 3e-12
(P16649) RecName: Full=General transcriptional corepressor TUP1;... 76 3e-12
M31733_1(M31733|pid:none) S.cerevisiae TUP1 protein gene, comple... 76 3e-12
AE017341_745(AE017341|pid:none) Cryptococcus neoformans var. neo... 76 3e-12
X16365_1(X16365|pid:none) Yeast suppressor gene for flocculation... 76 3e-12
AF098070_1(AF098070|pid:none) Drosophila melanogaster Lis1 homol... 76 3e-12
(Q7KNS3) RecName: Full=Lissencephaly-1 homolog; Short=L... 76 3e-12
BT045543_1(BT045543|pid:none) Salmo salar clone ssal-rgf-524-224... 76 4e-12
AM778942_51(AM778942|pid:none) Microcystis aeruginosa PCC 7806 g... 76 4e-12
CP000806_1073(CP000806|pid:none) Cyanothece sp. ATCC 51142 circu... 76 4e-12
(Q5ZIU8) RecName: Full=Katanin p80 WD40-containing subunit B1; ... 76 4e-12
CP000117_2488(CP000117|pid:none) Anabaena variabilis ATCC 29413,... 76 4e-12
AM989984_16(AM989984|pid:none) Zygosaccharomyces rouxii strain C... 76 4e-12
DQ410670_1(DQ410670|pid:none) Gallus gallus brain p80 katanin mR... 76 4e-12
AM238664_1098(AM238664|pid:none) Streptomyces ambofaciens ATCC 2... 76 4e-12
FN313599_1(FN313599|pid:none) Schistosoma japonicum isolate Anhu... 75 5e-12
AK304767_1(AK304767|pid:none) Homo sapiens cDNA FLJ54259 complet... 75 5e-12
AK145982_1(AK145982|pid:none) Mus musculus 13 days pregnant adul... 75 5e-12
CP000249_3378(CP000249|pid:none) Frankia sp. CcI3, complete geno... 75 5e-12
(Q54Y96) RecName: Full=WD40 repeat-containing protein smu1; 75 5e-12
AY892191_1(AY892191|pid:none) Synthetic construct Homo sapiens c... 75 5e-12
(Q2TAY7) RecName: Full=WD40 repeat-containing protein SMU1; AltN... 75 5e-12
AG2400(AG2400) WD-repeat protein [imported] - Nostoc sp. (strain... 75 5e-12
BT045451_1(BT045451|pid:none) Salmo salar clone ssal-rgf-521-347... 75 5e-12
BC074533_1(BC074533|pid:none) Xenopus tropicalis PRP19/PSO4 homo... 75 5e-12
(Q6P2Y2) RecName: Full=WD repeat-containing protein 69; &BC0642... 75 5e-12
BC044093_1(BC044093|pid:none) Xenopus laevis nuclear matrix prot... 75 6e-12
BX294026_14(BX294026|pid:none) Neurospora crassa DNA linkage gro... 75 6e-12
S36113(S36113)LIS-1 protein - human 75 6e-12
AC159435_6(AC159435|pid:none) Trypanosoma brucei chromosome 8 cl... 75 6e-12
(Q7S7L4) RecName: Full=Nuclear distribution protein pac-1b; AltN... 75 6e-12
(P43034) RecName: Full=Platelet-activating factor acetylhydrolas... 75 6e-12
S33263(S33263;S45729;A54593)transcription initiation factor IID-... 75 6e-12
(O74184) RecName: Full=WD repeat-containing protein wat1; AltNam... 75 6e-12
(Q5REG7) RecName: Full=Platelet-activating factor acetylhydrolas... 75 6e-12
(P43033) RecName: Full=Platelet-activating factor acetylhydrolas... 75 6e-12
(P49846) RecName: Full=Transcription initiation factor TFIID sub... 75 6e-12
AJ720686_1(AJ720686|pid:none) Gallus gallus mRNA for hypothetica... 75 6e-12
(Q6NVM2) RecName: Full=Katanin p80 WD40-containing subunit B1; ... 75 6e-12
CP001110_343(CP001110|pid:none) Pelodictyon phaeoclathratiforme ... 75 8e-12
CP000089_3569(CP000089|pid:none) Dechloromonas aromatica RCB, co... 75 8e-12
AF005740_1(AF005740|pid:none) Kluyveromyces lactis transcription... 75 8e-12
(Q5ZME8) RecName: Full=WD40 repeat-containing protein SMU1; AltN... 75 8e-12
(Q9GL51) RecName: Full=Platelet-activating factor acetylhydrolas... 75 8e-12
EU961763_1(EU961763|pid:none) Zea mays clone 238133 unknown mRNA. 75 8e-12
AK147309_1(AK147309|pid:none) Mus musculus adult male brain UNDE... 75 8e-12
AE016820_576(AE016820|pid:none) Ashbya gossypii (= Eremothecium ... 75 8e-12
AB264260_1(AB264260|pid:none) Cryptomeria japonica CC2196 gene f... 75 8e-12
AP009552_5491(AP009552|pid:none) Microcystis aeruginosa NIES-843... 75 8e-12
L25109_1(L25109|pid:none) Mus musculus LIS mRNA, partial cds. 75 8e-12
AC149637_4(AC149637|pid:none) Medicago truncatula clone mth2-181... 74 1e-11
AM910987_42(AM910987|pid:none) Plasmodium knowlesi strain H chro... 74 1e-11
AM910992_223(AM910992|pid:none) Plasmodium knowlesi strain H chr... 74 1e-11
AC146745_23(AC146745|pid:none) Medicago truncatula clone mth2-53... 74 1e-11
FN357843_1(FN357843|pid:none) Schistosoma mansoni genome sequenc... 74 1e-11
AK295596_1(AK295596|pid:none) Homo sapiens cDNA FLJ58572 complet... 74 1e-11
CP001287_904(CP001287|pid:none) Cyanothece sp. PCC 8801, complet... 74 1e-11
AB053266_1(AB053266|pid:none) Homo sapiens mRNA for TUWD12, comp... 74 1e-11
CP001344_497(CP001344|pid:none) Cyanothece sp. PCC 7425, complet... 74 1e-11
CP000117_5003(CP000117|pid:none) Anabaena variabilis ATCC 29413,... 74 1e-11
BC108505_1(BC108505|pid:none) Xenopus laevis hypothetical protei... 74 1e-11
CP000249_314(CP000249|pid:none) Frankia sp. CcI3, complete genome. 74 1e-11
(Q7ZVA0) RecName: Full=WD40 repeat-containing protein SMU1; AltN... 74 1e-11
AE014296_2405(AE014296|pid:none) Drosophila melanogaster chromos... 74 1e-11
AF1890(AF1890) WD-repeat protein [imported] - Nostoc sp. (strain... 74 1e-11
(Q09715) RecName: Full=Transcriptional repressor tup11; &CU3296... 74 1e-11
L13387_1(L13387|pid:none) Homo sapiens (clone 6-1) Miller-Dieker... 74 1e-11
(P38129) RecName: Full=Transcription initiation factor TFIID sub... 74 2e-11
AY895973_1(AY895973|pid:none) Hordeum vulgare subsp. spontaneum ... 74 2e-11
CP000117_2956(CP000117|pid:none) Anabaena variabilis ATCC 29413,... 74 2e-11
AF474160_1(AF474160|pid:none) Candida glabrata global repressor ... 74 2e-11
AY895983_1(AY895983|pid:none) Hordeum vulgare subsp. spontaneum ... 74 2e-11
CP001037_148(CP001037|pid:none) Nostoc punctiforme PCC 73102, co... 74 2e-11
BC045954_1(BC045954|pid:none) Danio rerio PRP19/PSO4 homolog (S.... 73 2e-11
(Q5FWQ6) RecName: Full=WD repeat-containing protein 69; &BC0892... 73 2e-11
CP000839_184(CP000839|pid:none) Acaryochloris marina MBIC11017 p... 73 2e-11
FN392320_1176(FN392320|pid:none) Pichia pastoris GS115 chromosom... 73 2e-11
CT573213_677(CT573213|pid:none) Frankia alni str. ACN14A chromos... 73 2e-11
BA000045_2655(BA000045|pid:none) Gloeobacter violaceus PCC 7421 ... 73 2e-11
AB264259_1(AB264259|pid:none) Cryptomeria japonica CC2196 gene f... 73 2e-11
(Q9PTR5) RecName: Full=Platelet-activating factor acetylhydrolas... 73 2e-11
CP000117_4784(CP000117|pid:none) Anabaena variabilis ATCC 29413,... 73 2e-11
(Q803D2) RecName: Full=Lissencephaly-1 homolog B; &BC044530_1(B... 73 2e-11
BC120088_1(BC120088|pid:none) Bos taurus mitogen-activated prote... 73 2e-11
Z74192_1(Z74192|pid:none) S.cerevisiae chromosome IV reading fra... 73 3e-11
AC007259_17(AC007259|pid:none) Arabidopsis thaliana chromosome I... 73 3e-11
AY814155_1(AY814155|pid:none) Schistosoma japonicum SJCHGC06272 ... 73 3e-11
BT061165_1(BT061165|pid:none) Zea mays full-length cDNA clone ZM... 73 3e-11
CP000839_340(CP000839|pid:none) Acaryochloris marina MBIC11017 p... 73 3e-11
AM778950_12(AM778950|pid:none) Microcystis aeruginosa PCC 7806 g... 73 3e-11
EU961646_1(EU961646|pid:none) Zea mays clone 237328 unknown mRNA. 73 3e-11
CP001287_2282(CP001287|pid:none) Cyanothece sp. PCC 8801, comple... 73 3e-11
(P53622) RecName: Full=Coatomer subunit alpha; AltName: Full=Alp... 73 3e-11
AE016818_101(AE016818|pid:none) Ashbya gossypii (= Eremothecium ... 72 4e-11
AY547291_1(AY547291|pid:none) Toxoplasma gondii receptor for act... 72 4e-11
FN357585_7(FN357585|pid:none) Schistosoma mansoni genome sequenc... 72 4e-11
(Q9NDC9) RecName: Full=Lissencephaly-1 homolog; AltName: Full=Pr... 72 4e-11
AC087326_3(AC087326|pid:none) Trypanosoma brucei chromosome 4 cl... 72 4e-11
AF052432_1(AF052432|pid:none) Homo sapiens katanin p80 subunit m... 72 4e-11
AM910994_105(AM910994|pid:none) Plasmodium knowlesi strain H chr... 72 4e-11
CP000148_1200(CP000148|pid:none) Geobacter metallireducens GS-15... 72 4e-11
BT045765_1(BT045765|pid:none) Salmo salar clone ssal-rgf-530-312... 72 4e-11
AB264263_1(AB264263|pid:none) Chamaecyparis pisifera CC2196 gene... 72 4e-11
BT034088_1(BT034088|pid:none) Zea mays full-length cDNA clone ZM... 72 4e-11
AB264266_1(AB264266|pid:none) Chamaecyparis obtusa CC2196 gene f... 72 4e-11
AY485643_1(AY485643|pid:none) Hordeum vulgare subsp. vulgare BAC... 72 5e-11
(Q8N136) RecName: Full=WD repeat-containing protein 69; &AC0730... 72 5e-11
CR382128_39(CR382128|pid:none) Yarrowia lipolytica strain CLIB12... 72 5e-11
AK301861_1(AK301861|pid:none) Homo sapiens cDNA FLJ54195 complet... 72 5e-11
CP000806_3920(CP000806|pid:none) Cyanothece sp. ATCC 51142 circu... 72 5e-11
CP001142_182(CP001142|pid:none) Phaeodactylum tricornutum CCAP 1... 72 5e-11
(Q6CG48) RecName: Full=Nuclear distribution protein PAC1; AltNam... 72 5e-11
CP000117_1621(CP000117|pid:none) Anabaena variabilis ATCC 29413,... 72 5e-11
CT005245_3(CT005245|pid:none) Leishmania major strain Friedlin, ... 72 5e-11
(Q9C1X1) RecName: Full=Periodic tryptophan protein 2 homolog; &... 72 5e-11
CP001100_484(CP001100|pid:none) Chloroherpeton thalassium ATCC 3... 72 7e-11
CU633454_96(CU633454|pid:none) Podospora anserina genomic DNA ch... 72 7e-11
CP001099_247(CP001099|pid:none) Chlorobaculum parvum NCIB 8327, ... 72 7e-11
CP000820_6355(CP000820|pid:none) Frankia sp. EAN1pec, complete g... 72 7e-11
CP001037_247(CP001037|pid:none) Nostoc punctiforme PCC 73102, co... 72 7e-11
(Q9SJT9) RecName: Full=Coatomer subunit alpha-2; AltName: Full=A... 71 9e-11
AJ580822_1(AJ580822|pid:none) Lotus corniculatus var. japonicus ... 71 9e-11
AM746676_2689(AM746676|pid:none) Sorangium cellulosum 'So ce 56'... 71 9e-11
BX248416_6(BX248416|pid:none) Zebrafish DNA sequence from clone ... 71 1e-10
CP000117_2876(CP000117|pid:none) Anabaena variabilis ATCC 29413,... 71 1e-10
CP000828_1004(CP000828|pid:none) Acaryochloris marina MBIC11017,... 71 1e-10
CT573213_5413(CT573213|pid:none) Frankia alni str. ACN14A chromo... 71 1e-10
AL032627_17(AL032627|pid:none) Caenorhabditis elegans YAC Y41C4A... 71 1e-10
CR382136_675(CR382136|pid:none) Debaryomyces hansenii strain CBS... 71 1e-10
(Q91WQ5) RecName: Full=TAF5-like RNA polymerase II p300/CBP-asso... 71 1e-10
CU928178_641(CU928178|pid:none) Zygosaccharomyces rouxii strain ... 71 1e-10
(Q9AUR7) RecName: Full=Coatomer subunit alpha-2; AltName: Full=A... 71 1e-10
BX649315_6(BX649315|pid:none) Zebrafish DNA sequence from clone ... 71 1e-10
AK342167_1(AK342167|pid:none) Acyrthosiphon pisum ACYPI005525 mR... 71 1e-10
AM463781_1(AM463781|pid:none) Vitis vinifera contig VV78X121538.... 71 1e-10
(Q9BRX9) RecName: Full=Mitogen-activated protein kinase organize... 70 2e-10
CP001344_1900(CP001344|pid:none) Cyanothece sp. PCC 7425, comple... 70 2e-10
(P35606) RecName: Full=Coatomer subunit beta'; AltName: Full=Bet... 70 2e-10
(P35605) RecName: Full=Coatomer subunit beta'; AltName: Full=Bet... 70 2e-10
CU633438_311(CU633438|pid:none) Podospora anserina genomic DNA c... 70 2e-10
S35312(S35312;S39811) coatomer complex beta' chain - bovine &X7... 70 2e-10
AK223195_1(AK223195|pid:none) Homo sapiens mRNA for mitogen-acti... 70 2e-10
AL844509_427(AL844509|pid:none) Plasmodium falciparum 3D7 chromo... 70 2e-10
(O55029) RecName: Full=Coatomer subunit beta'; AltName: Full=Bet... 70 2e-10
AK098821_1(AK098821|pid:none) Homo sapiens cDNA FLJ25955 fis, cl... 70 2e-10
BA000039_488(BA000039|pid:none) Thermosynechococcus elongatus BP... 70 2e-10
AM920436_1182(AM920436|pid:none) Penicillium chrysogenum Wiscons... 70 2e-10
FN314118_1(FN314118|pid:none) Schistosoma japonicum isolate Anhu... 70 2e-10
AK088953_1(AK088953|pid:none) Mus musculus 2 days neonate thymus... 70 2e-10
U75309_1(U75309|pid:none) Human TBP-associated factor (hTAFII100... 70 2e-10
BC052268_1(BC052268|pid:none) Homo sapiens TAF5 RNA polymerase I... 70 2e-10
(Q15542) RecName: Full=Transcription initiation factor TFIID sub... 70 2e-10
BC156180_1(BC156180|pid:none) Synthetic construct Mus musculus c... 70 2e-10
(Q0J3D9) RecName: Full=Coatomer subunit alpha-3; AltName: Full=A... 70 2e-10
BC160901_1(BC160901|pid:none) Rattus norvegicus TAF5-like RNA po... 70 2e-10
CU928165_262(CU928165|pid:none) Kluyveromyces thermotolerans str... 70 3e-10
AP006852_172(AP006852|pid:none) Candida albicans genomic DNA, ch... 70 3e-10
CR940353_257(CR940353|pid:none) Theileria annulata strain Ankara... 70 3e-10
AP008931_213(AP008931|pid:none) Rhodococcus erythropolis PR4 pla... 70 3e-10
CP000393_3435(CP000393|pid:none) Trichodesmium erythraeum IMS101... 70 3e-10
(O75529) RecName: Full=TAF5-like RNA polymerase II p300/CBP-asso... 70 3e-10
FM992695_78(FM992695|pid:none) Candida dubliniensis CD36 chromos... 69 3e-10
CR380957_394(CR380957|pid:none) Candida glabrata strain CBS138 c... 69 3e-10
CP000820_1110(CP000820|pid:none) Frankia sp. EAN1pec, complete g... 69 3e-10
AJ006523_1(AJ006523|pid:none) Drosophila melanogaster mRNA for t... 69 3e-10
(Q54YD8) RecName: Full=Coatomer subunit beta'; AltName: Full=Bet... 69 3e-10
BC019369_1(BC019369|pid:none) Mus musculus RIKEN cDNA 1500041N16... 69 3e-10
DQ842555_1(DQ842555|pid:none) Plasmodium chabaudi chabaudi clone... 69 4e-10
BC096500_1(BC096500|pid:none) Xenopus tropicalis hypothetical pr... 69 4e-10
BC041755_1(BC041755|pid:none) Xenopus laevis coatomer protein co... 69 4e-10
AY812578_1(AY812578|pid:none) Schistosoma japonicum SJCHGC09556 ... 69 4e-10
AY032884_1(AY032884|pid:none) Lycopersicon esculentum WD-40 repe... 69 4e-10
AC011717_4(AC011717|pid:none) Arabidopsis thaliana chromosome 1 ... 69 4e-10
(O62621) RecName: Full=Coatomer subunit beta'; AltName: Full=Bet... 69 4e-10
(Q9FLX9) RecName: Full=Notchless protein homolog; &AB009055_3(A... 69 4e-10
(Q8C092) RecName: Full=Transcription initiation factor TFIID sub... 69 4e-10
AM438365_3(AM438365|pid:none) Vitis vinifera contig VV78X052512.... 69 4e-10
AB264261_1(AB264261|pid:none) Thujopsis dolabrata CC2196 gene fo... 69 4e-10
AP009552_1527(AP009552|pid:none) Microcystis aeruginosa NIES-843... 69 4e-10
AK111641_1(AK111641|pid:none) Oryza sativa Japonica Group cDNA c... 69 6e-10
EF144649_1(EF144649|pid:none) Populus trichocarpa clone WS01116_... 69 6e-10
CU928169_531(CU928169|pid:none) Kluyveromyces thermotolerans str... 69 6e-10
CU928168_461(CU928168|pid:none) Kluyveromyces thermotolerans str... 69 6e-10
AP008209_1416(AP008209|pid:none) Oryza sativa (japonica cultivar... 69 6e-10
BC158602_1(BC158602|pid:none) Rattus norvegicus sperm associated... 69 6e-10
(Q9CAA0) RecName: Full=Coatomer subunit beta'-1; AltName: Full=B... 69 6e-10
BT001736_1(BT001736|pid:none) Drosophila melanogaster RE72568 fu... 69 6e-10
FN357317_20(FN357317|pid:none) Schistosoma mansoni genome sequen... 69 6e-10
BC075582_1(BC075582|pid:none) Xenopus tropicalis TAF5-like RNA p... 69 6e-10
AY596303_1(AY596303|pid:none) Chlamydomonas reinhardtii unknown ... 69 6e-10
CT573213_3533(CT573213|pid:none) Frankia alni str. ACN14A chromo... 69 6e-10
BT071278_1(BT071278|pid:none) Picea sitchensis clone WS02817_P12... 69 6e-10
BT036985_1(BT036985|pid:none) Zea mays full-length cDNA clone ZM... 69 6e-10
(P25635) RecName: Full=Periodic tryptophan protein 2; AltName: F... 68 8e-10
CP000496_274(CP000496|pid:none) Pichia stipitis CBS 6054 chromos... 68 8e-10
AL389891_1(AL389891|pid:none) Neurospora crassa DNA linkage grou... 68 8e-10
EU850438_3(EU850438|pid:none) Adineta vaga hypothetical protein ... 68 8e-10
(Q90ZL4) RecName: Full=Lissencephaly-1 homolog B; &AY032881_1(A... 68 8e-10
CU928171_512(CU928171|pid:none) Kluyveromyces thermotolerans str... 68 8e-10
(Q94A40) RecName: Full=Coatomer subunit alpha-1; AltName: Full=A... 68 8e-10
BC047817_1(BC047817|pid:none) Danio rerio PWP2 periodic tryptoph... 68 8e-10
AY223837_1(AY223837|pid:none) Homo sapiens LST8 mRNA, complete c... 68 1e-09
(Q55563) RecName: Full=Uncharacterized WD repeat-containing prot... 68 1e-09
AP007169_371(AP007169|pid:none) Aspergillus oryzae RIB40 genomic... 68 1e-09
AE016814_243(AE016814|pid:none) Ashbya gossypii (= Eremothecium ... 68 1e-09
AE014297_4572(AE014297|pid:none) Drosophila melanogaster chromos... 67 1e-09
CP000882_18(CP000882|pid:none) Hemiselmis andersenii chromosome ... 67 1e-09
AK021536_1(AK021536|pid:none) Homo sapiens cDNA FLJ11474 fis, cl... 67 1e-09
CR812943_6(CR812943|pid:none) Zebrafish DNA sequence from clone ... 67 1e-09
AE2490(AE2490) WD-repeat protein [imported] - Nostoc sp. (strain... 67 1e-09
AM746676_3634(AM746676|pid:none) Sorangium cellulosum 'So ce 56'... 67 1e-09
(P74442) RecName: Full=Uncharacterized WD repeat-containing prot... 67 1e-09
CR380959_185(CR380959|pid:none) Candida glabrata strain CBS138 c... 67 1e-09
CP001037_2838(CP001037|pid:none) Nostoc punctiforme PCC 73102, c... 67 1e-09
(Q9BVC4) RecName: Full=Target of rapamycin complex subunit LST8;... 67 1e-09
DQ647383_1(DQ647383|pid:none) Chlamydomonas reinhardtii lissence... 67 1e-09
AP007175_233(AP007175|pid:none) Aspergillus oryzae RIB40 genomic... 67 1e-09
BT012225_1(BT012225|pid:none) Arabidopsis thaliana At5g13480 gen... 67 1e-09
EU962813_1(EU962813|pid:none) Zea mays clone 245733 PP1/PP2A pho... 67 1e-09
AM270259_12(AM270259|pid:none) Aspergillus niger contig An12c002... 67 1e-09
CU074315_1(CU074315|pid:none) Podospora anserina genomic DNA, NW... 67 2e-09
AK016201_1(AK016201|pid:none) Mus musculus adult male testis cDN... 67 2e-09
CU633899_348(CU633899|pid:none) Podospora anserina genomic DNA c... 67 2e-09
(Q4WLM7) RecName: Full=Nuclear distribution protein nudF homolog; 67 2e-09
AK304219_1(AK304219|pid:none) Homo sapiens cDNA FLJ61545 complet... 67 2e-09
(Q0P593) RecName: Full=WD repeat-containing protein 69; &BC1203... 67 2e-09
CP001337_2947(CP001337|pid:none) Chloroflexus aggregans DSM 9485... 67 2e-09
CP000393_3433(CP000393|pid:none) Trichodesmium erythraeum IMS101... 67 2e-09
AL953896_5(AL953896|pid:none) Zebrafish DNA sequence from clone ... 67 2e-09
(Q5BK30) RecName: Full=WD repeat-containing protein 69; &BC0912... 67 2e-09
AM920437_204(AM920437|pid:none) Penicillium chrysogenum Wisconsi... 67 2e-09
CP001291_3285(CP001291|pid:none) Cyanothece sp. PCC 7424, comple... 67 2e-09
AP003224_20(AP003224|pid:none) Oryza sativa Japonica Group genom... 67 2e-09
CP000842_108(CP000842|pid:none) Acaryochloris marina MBIC11017 p... 67 2e-09
(Q9UTC7) RecName: Full=Uncharacterized WD repeat-containing prot... 67 2e-09
(P38123) RecName: Full=COMPASS component SWD3; AltName: Full=Com... 67 2e-09
BC162672_1(BC162672|pid:none) Danio rerio coatomer protein compl... 67 2e-09
AP007164_475(AP007164|pid:none) Aspergillus oryzae RIB40 genomic... 67 2e-09
BC088354_1(BC088354|pid:none) Homo sapiens G protein beta subuni... 67 2e-09
GM960743_1(GM960743|pid:none) Sequence 7697 from Patent WO200814... 67 2e-09
CP000383_3602(CP000383|pid:none) Cytophaga hutchinsonii ATCC 334... 67 2e-09
AF039038_8(AF039038|pid:none) Caenorhabditis elegans cosmid K06A... 67 2e-09
AF323581_1(AF323581|pid:none) Podospora anserina beta transducin... 67 2e-09
AP007157_632(AP007157|pid:none) Aspergillus oryzae RIB40 genomic... 67 2e-09
FN357364_26(FN357364|pid:none) Schistosoma mansoni genome sequen... 67 2e-09
BX284666_2(BX284666|pid:none) Zebrafish DNA sequence from clone ... 67 2e-09
AL392174_12(AL392174|pid:none) Arabidopsis thaliana DNA chromoso... 67 2e-09
CR382131_819(CR382131|pid:none) Yarrowia lipolytica strain CLIB1... 67 2e-09
AP007161_767(AP007161|pid:none) Aspergillus oryzae RIB40 genomic... 66 3e-09
U96491_1(U96491|pid:none) Drosophila melanogaster RACK1 (rack1) ... 66 3e-09
CU928178_471(CU928178|pid:none) Zygosaccharomyces rouxii strain ... 66 3e-09
CP000686_3296(CP000686|pid:none) Roseiflexus sp. RS-1, complete ... 66 3e-09
AM778874_8(AM778874|pid:none) Microcystis aeruginosa PCC 7806 ge... 66 3e-09
CP000119_93(CP000119|pid:none) Anabaena variabilis ATCC 29413 pl... 66 3e-09
FM992694_169(FM992694|pid:none) Candida dubliniensis CD36 chromo... 66 3e-09
AP009552_3560(AP009552|pid:none) Microcystis aeruginosa NIES-843... 66 3e-09
AL592382_2(AL592382|pid:none) Pneumocystis carinii telomeric cos... 66 3e-09
BC161681_1(BC161681|pid:none) Xenopus laevis TBP-associated fact... 66 3e-09
BC168104_1(BC168104|pid:none) Xenopus tropicalis cDNA clone MGC:... 66 3e-09
BT043532_1(BT043532|pid:none) Salmo salar clone HM4_1707 guanine... 66 3e-09
(O74319) RecName: Full=Transcription initiation factor TFIID sub... 66 4e-09
AM392737_1(AM392737|pid:none) Synthetic construct Homo sapiens c... 66 4e-09
AM910990_319(AM910990|pid:none) Plasmodium knowlesi strain H chr... 66 4e-09
AF112205_1(AF112205|pid:none) Homo sapiens WSB-1 protein mRNA, c... 66 4e-09
(Q2UGU1) RecName: Full=Nuclear distribution protein nudF homolog; 66 4e-09
AF105259_1(AF105259|pid:none) Xenopus laevis activated protein k... 66 4e-09
BC097319_1(BC097319|pid:none) Rattus norvegicus G protein beta s... 66 4e-09
AK083731_1(AK083731|pid:none) Mus musculus 9 days embryo whole b... 66 4e-09
(Q9Y6I7) RecName: Full=WD repeat and SOCS box-containing protein... 66 4e-09
AE014298_1183(AE014298|pid:none) Drosophila melanogaster chromos... 66 4e-09
AK302021_1(AK302021|pid:none) Homo sapiens cDNA FLJ57656 complet... 66 4e-09
AM472330_1(AM472330|pid:none) Vitis vinifera contig VV79X004925.... 66 4e-09

>AF503433_2(AF503433|pid:none) Sorghum bicolor BAC 170F8, complete
sequence.
Length = 423

Score = 290 bits (741), Expect = 1e-76
Identities = 144/324 (44%), Positives = 215/324 (66%), Gaps = 2/324 (0%)
Frame = +1

Query: 493 PNFITKFITTHKNACRCAKFSWDGKYVATGSSDTSIKLLDVNKMRNYNQTKNETTEDSAP 672
P K ++ HKNA RCAKFS DGKY ATGS+DTSIK +V K++ QT ++D P
Sbjct: 105 PKHEAKHVSDHKNAARCAKFSPDGKYFATGSADTSIKFFEVAKIK---QTMVGDSKDG-P 160

Query: 673 SRPVLRTFYDHTMPINDLDFHPSAPILSSASKDGTIRFYDY-KSSLKRSFKYIQDTHGIR 849
+RPV+RTFYDHT INDLDFHP +PIL SA+KD TI+F+D+ K++ +++F+ IQDTH +R
Sbjct: 161 ARPVIRTFYDHTQAINDLDFHPESPILISAAKDNTIKFFDFSKTNARKAFRVIQDTHNVR 220

Query: 850 SINFHPCGDLILAGTDHQMIRLYNVNTFQSFTARKINEHHHGPINQVRFSLDGNIFASCS 1029
S+ FHPCGD +LAGTDH + LY++NTF + + + PINQVR+S G+++ + S
Sbjct: 221 SVCFHPCGDYLLAGTDHPVAHLYDINTFTCYLSANAQDSS-SPINQVRYSCTGSLYVTAS 279

Query: 1030 KDNTIKIWDSNNFSLISTLNSPHGGKEPTTVQISRNQKYLLSCGRDSMIKLWEITSGRLI 1209
KD +++IWD + + + HG E T+ +R+++Y+LSCG+DS +KLWE+ +GRL+
Sbjct: 280 KDGSLRIWDGVSAECVRPIIGAHGSAEATSAIFTRDERYVLSCGKDSCVKLWEVGTGRLV 339

Query: 1210 YSISTGVNQSGGQNKNRISATFNYTEDYIITNDEQPSVAVVYNSRTKEQVQKL-TGHNNT 1386
+ + + + R A FN TE+++++ DEQ + VV+++ T E+V +L +G
Sbjct: 340 KQYAGAI-----RRQFRCQAVFNETEEFVLSVDEQNNEVVVWDALTAEKVARLPSGSTGA 394

Query: 1387 VRYIAASPVENALMTCSLDHRGRF 1458
R++ SPVE + C D RF
Sbjct: 395 PRWLDHSPVEPVFVICGNDRSIRF 418

Lambda K H
0.317 0.132 0.386

Gapped
Lambda K H
0.267 0.0410 0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3236559
Number of Hits to DB: 1,967,516,865
Number of extensions: 33869462
Number of successful extensions: 103995
Number of sequences better than 10.0: 3631
Number of HSP's gapped: 91553
Number of HSP's successfully gapped: 7603
Length of query: 498
Length of database: 1,051,180,864
Length adjustment: 133
Effective length of query: 365
Effective length of database: 620,718,517
Effective search space: 226562258705
Effective search space used: 226562258705
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)

PSORT

psg: 0.58 gvh: 0.36 alm: 0.51 top: 0.53 tms: 0.00 mit: 0.23 mip: 0.00
nuc: 0.00 erl: 0.00 erm: 0.20 pox: 0.00 px2: 0.00 vac: 0.00 rnp: 0.00
act: 0.00 caa: 0.00 yqr: 0.00 tyr: 0.00 leu: 0.00 gpi: 0.00 myr: 0.00
dna: 0.00 rib: 0.00 bac: 0.00 m1a: 0.00 m1b: 0.00 m2 : 0.00 mNt: 0.00
m3a: 0.00 m3b: 0.00 m_ : 1.00

44.0 %: cytoplasmic
28.0 %: nuclear
20.0 %: mitochondrial
4.0 %: cytoskeletal
4.0 %: peroxisomal

>> prediction for Contig-U02442-1 is cyt

VS (DIR, S) 0
VH (FL, L) 0
VF (FL, S) 1
AH (FL, L) 0
AF (FL, S) 1
SL (DIR, L) 0
SS (DIR, S) 0
SH (FL, L) 0
SF (FL, S) 2
CH (FL, L) 0
CF (FL, S) 0
FCL (DIR, L) 0
FC (DIR, S) 0
FC-IC (SUB) 0