Contig-U14031-1 |
Contig ID |
Contig-U14031-1 |
Contig update |
2002.12.18 |
Contig sequence |
|
Gap |
no gap |
Contig length |
910 |
Chromosome number (1..6, M) |
1 |
Chromosome length |
4919822 |
Start point |
4265788 |
End point |
4264878 |
Strand (PLUS/MINUS) |
MINUS |
Number of clones |
4 |
Number of EST |
6 |
Link to clone list |
U14031 |
List of clone(s) |
|
Translated Amino Acid sequence |
|
Translated Amino Acid sequence (All Frames) |
|
own update |
2004. 6.10 |
Homology vs CSM-cDNA |
|
dna update |
2008.12.16 |
Homology vs DNA |
Query= Contig-U14031-1 (Contig-U14031-1Q) /CSM_Contig/Contig-U14031-1Q.Seq.d (910 letters)
Database: ddbj_A 92,845,959 sequences; 95,242,211,685 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value N
(U02925) Dictyostelium discoideum Ax3 Rab11 mRNA, complete cds. 1011 0.0 2 (C94272) Dictyostelium discoideum slug cDNA, clone SSK725. 557 0.0 2 (AU073073) Dictyostelium discoideum slug cDNA, clone SSF871. 234 5e-64 2 (C84806) Dictyostelium discoideum slug cDNA, clone SSF871. 254 5e-63 1 (AU074443) Dictyostelium discoideum slug cDNA, clone SSK725. 196 1e-52 2 (EW753320) sb_007_07I06_m13reverselong Onychiurus arcticus r... 139 1e-35 3 (FK081885) XABT137201.b1 Gateway compatible cien cDNA librar... 98 2e-33 4 (FK159137) XABT185731.b1 Gateway compatible cien cDNA librar... 100 8e-33 4 (BE579293) kq25d05.y1 TBN95TM-SSR Strongyloides stercoralis ... 109 1e-32 4 (BG227626) kq11g11.y1 TBN95TM-SSR Strongyloides stercoralis ... 109 1e-32 4 (EW748707) sb_006_04D21_m13reverselong Onychiurus arcticus d... 131 2e-31 2 (FF716101) XABT34878.fwd Gateway compatible cien cDNA librar... 100 3e-31 4 (BF015139) kq64g09.y1 TBN95TM-SSR Strongyloides stercoralis ... 109 5e-31 4 (FE260089) CAZN1027.rev CAZN Naegleria gruberi Flagellate St... 92 9e-31 3 (FE260090) CAZN1027.fwd CAZN Naegleria gruberi Flagellate St... 92 1e-30 3 (FK049598) XABT117612.b1 Gateway compatible cien cDNA librar... 92 1e-30 4 (FK060604) XABT124215.b1 Gateway compatible cien cDNA librar... 92 1e-30 4 (FF771212) XABT73426.fwd Gateway compatible cien cDNA librar... 92 1e-30 4 (FK054463) XABT120513.b1 Gateway compatible cien cDNA librar... 92 1e-30 4 (FF770890) XABT73208.fwd Gateway compatible cien cDNA librar... 92 2e-30 4 (BE028962) kp22h01.y1 TBN95TM-SSFH Strongyloides stercoralis... 109 2e-30 3 (BG225395) kp66g09.y1 TBN95TM-SSFH Strongyloides stercoralis... 109 2e-30 3 (BG225792) kp72a01.y1 TBN95TM-SSFH Strongyloides stercoralis... 109 2e-30 3 (BE030357) kp41h11.y1 TBN95TM-SSFH Strongyloides stercoralis... 109 2e-30 3 (FF807939) XABT98382.fwd Gateway compatible cien cDNA librar... 107 3e-30 3 (AV971835) Ciona intestinalis cDNA, clone:cicl11n04, 5' end,... 96 7e-30 3 (AV967689) Ciona intestinalis cDNA, clone:cieg23a19, 5' end,... 96 8e-30 3 (BW362897) Ciona intestinalis cDNA, clone:cima828g24, 5'end,... 96 9e-30 3 (BW363221) Ciona intestinalis cDNA, clone:cima829f18, 5'end,... 96 1e-29 3 (BW042207) Ciona intestinalis cDNA, clone:cibd049b02, 5' end... 96 1e-29 3 (FF717639) XABT35901.fwd Gateway compatible cien cDNA librar... 100 1e-29 3 (BW046185) Ciona intestinalis cDNA, clone:cibd005n13, 5' end... 96 1e-29 3 (BW192621) Ciona intestinalis cDNA, clone:ciad097e18, 5' end... 96 1e-29 3 (BW342429) Ciona intestinalis cDNA, clone:ciem821i10, 5'end,... 96 1e-29 3 (FF935471) CBWU71487.b1 Yutaka Satou unpublished cDNA librar... 96 1e-29 3 (BW448430) Ciona intestinalis cDNA, clone:cijv011f10, 5'end,... 96 1e-29 3 (FF875809) CBWU18083.b1 Yutaka Satou unpublished cDNA librar... 96 1e-29 3 (FF984993) CBWU97936.b1 Yutaka Satou unpublished cDNA librar... 96 1e-29 3 (BW477110) Ciona intestinalis cDNA, clone:cima007n05, 5'end,... 96 1e-29 3 (BW434404) Ciona intestinalis cDNA, clone:cijv028l19, 5'end,... 96 1e-29 3 (FF945730) CBWU77874.b1 Yutaka Satou unpublished cDNA librar... 96 1e-29 3 (FF808500) XABT98764.fwd Gateway compatible cien cDNA librar... 100 1e-29 3 (BW474533) Ciona intestinalis cDNA, clone:cima010h03, 5'end,... 96 1e-29 3 (BW486501) Ciona intestinalis cDNA, clone:cima056p07, 5'end,... 96 1e-29 3 (FK170894) XABT192934.b1 Gateway compatible cien cDNA librar... 100 1e-29 4 (BW486566) Ciona intestinalis cDNA, clone:cima005d09, 5'end,... 96 2e-29 3 (EW751681) sb_007_02N21_m13reverselong Onychiurus arcticus r... 123 4e-29 2 (FK089125) XABT141773.b1 Gateway compatible cien cDNA librar... 96 4e-29 3 (FF789957) XABT86059.fwd Gateway compatible cien cDNA librar... 92 8e-29 4 (FK178569) XABT197617.b1 Gateway compatible cien cDNA librar... 100 2e-28 3 (BW357570) Ciona intestinalis cDNA, clone:cima813d17, 5'end,... 96 5e-28 3 (FK084346) XABT138854.b1 Gateway compatible cien cDNA librar... 100 5e-28 3 (EW756962) sb_008_06O07_m13reverselong Onychiurus arcticus r... 119 5e-28 2 (AV976232) Ciona intestinalis cDNA, clone:cieg41f16, 5' end,... 88 2e-27 3 (FK085690) XABT139653.b1 Gateway compatible cien cDNA librar... 92 2e-27 3 (FF713295) XABT33015.fwd Gateway compatible cien cDNA librar... 92 2e-27 3 (BW032326) Ciona intestinalis cDNA, clone:cibd001m17, 5' end... 96 2e-27 3 (FK080388) XABT136270.b1 Gateway compatible cien cDNA librar... 100 3e-27 4 (BW053407) Ciona intestinalis cDNA, clone:cibd078g22, 5' end... 96 7e-27 3 (BW198393) Ciona intestinalis cDNA, clone:cicl067i06, 5' end... 90 3e-26 3 (AV960913) Ciona intestinalis cDNA, clone:cicl14f08, 5' end,... 88 3e-26 3 (BW053624) Ciona intestinalis cDNA, clone:cibd079b04, 5' end... 96 3e-26 3 (BP007537) Ciona intestinalis cDNA, clone:ciad44p04, 5' end,... 88 3e-26 3 (BW362623) Ciona intestinalis cDNA, clone:cima827k24, 5'end,... 88 3e-26 3 (FK078771) XABT135298.b1 Gateway compatible cien cDNA librar... 88 3e-26 3 (BW311030) Ciona intestinalis cDNA, clone:ciht009h02, 5' end... 88 3e-26 3 (AV973835) Ciona intestinalis cDNA, clone:cieg32o16, 5' end,... 88 3e-26 3 (AV888871) Ciona intestinalis cDNA, clone:rcicl31c05, 3' end... 84 3e-26 3 (BW370704) Ciona intestinalis cDNA, clone:cima850p23, 5'end,... 88 3e-26 3 (BW343265) Ciona intestinalis cDNA, clone:ciem824a08, 5'end,... 88 3e-26 3 (BW287104) Ciona intestinalis cDNA, clone:cigd032b23, 5' end... 88 3e-26 3 (BW049760) Ciona intestinalis cDNA, clone:cibd068h02, 5' end... 88 3e-26 3 (FK097445) XABT146849.b1 Gateway compatible cien cDNA librar... 88 3e-26 3 (FK204406) XABT213650.b1 Gateway compatible cien cDNA librar... 88 3e-26 3 (BW343792) Ciona intestinalis cDNA, clone:ciem825j14, 5'end,... 88 3e-26 3 (FK089338) XABT141906.b1 Gateway compatible cien cDNA librar... 88 3e-26 3 (FF877171) CBWU18962.b1 Yutaka Satou unpublished cDNA librar... 88 3e-26 3 (FF949358) CBWU80141.b1 Yutaka Satou unpublished cDNA librar... 88 3e-26 3 (FK159061) XABT185688.b1 Gateway compatible cien cDNA librar... 88 3e-26 3 (FF690663) XABT103384.fwd Gateway compatible cien cDNA libra... 88 3e-26 3 (FF910195) CBWU39776.b1 Yutaka Satou unpublished cDNA librar... 88 3e-26 3 (FF796958) XABT90710.fwd Gateway compatible cien cDNA librar... 88 3e-26 3 (BW029095) Ciona intestinalis cDNA, clone:cibd011h10, 5' end... 88 4e-26 3 (BW232643) Ciona intestinalis cDNA, clone:ciad103b03, 5' end... 88 4e-26 3 (BW035665) Ciona intestinalis cDNA, clone:cibd029g24, 5' end... 88 4e-26 3 (FK118507) XABT160940.b1 Gateway compatible cien cDNA librar... 88 4e-26 3 (FK067546) XABT128382.b1 Gateway compatible cien cDNA librar... 88 4e-26 3 (BW055102) Ciona intestinalis cDNA, clone:cibd082h08, 5' end... 88 4e-26 3 (FK100514) XABT148736.b1 Gateway compatible cien cDNA librar... 88 4e-26 3 (BW045979) Ciona intestinalis cDNA, clone:cibd005e08, 5' end... 88 4e-26 3 (BW035663) Ciona intestinalis cDNA, clone:cibd029g22, 5' end... 88 4e-26 3 (FF937369) CBWU72690.b1 Yutaka Satou unpublished cDNA librar... 88 4e-26 3 (FF757479) XABT64529.fwd Gateway compatible cien cDNA librar... 88 4e-26 3 (FF926929) CBWU65443.b1 Yutaka Satou unpublished cDNA librar... 88 4e-26 3 (FF987788) CBWU99654.b1 Yutaka Satou unpublished cDNA librar... 88 4e-26 3 (FF987628) CBWU99558.b1 Yutaka Satou unpublished cDNA librar... 88 4e-26 3 (FF931554) CBWU68689.b1 Yutaka Satou unpublished cDNA librar... 88 4e-26 3 (FF934105) CBWU70261.b1 Yutaka Satou unpublished cDNA librar... 88 4e-26 3 (BW482590) Ciona intestinalis cDNA, clone:cima054k23, 5'end,... 88 5e-26 3 (FF991911) CBWU109563.b1 Yutaka Satou unpublished cDNA libra... 88 5e-26 3
>(U02925) Dictyostelium discoideum Ax3 Rab11 mRNA, complete cds. Length = 769
Score = 1011 bits (510), Expect(2) = 0.0 Identities = 516/518 (99%) Strand = Plus / Plus
Query: 155 aataaagatgacttcaaaaggttcacaagaagaatacgactatttatataaaattgtact 214 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 60 aataaagatgacttcaaaaggatcacaagaagaatacgactatttatataaaattgtact 119
Query: 215 cattggtgatagtggtgttggcaaatcaaatcttttatccagattcacacgtaatgaatt 274 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 120 cattggtgatagtggtgttggcaaatcaaatcttttatccagattcacacgtaatgaatt 179
Query: 275 cagtttagagaccaaatcaaccattggtgtagaatttgcaactagaactattcaaactga 334 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 180 cagtttagagaccaaatcaaccattggtgtagaatttgcaactagaaccattcaaactga 239
Query: 335 aggtaaaactattaaagctcaagtgtgggatactgcaggtcaagaaagatatagagcaat 394 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 240 aggtaaaactattaaagctcaagtgtgggatactgcaggtcaagaaagatatagagcaat 299
Query: 395 tacatctgcttattatcgtggtgcagttggtgcattacttgtatatgatattgcaaagca 454 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 300 tacatctgcttattatcgtggtgcagttggtgcattacttgtatatgatattgcaaagca 359
Query: 455 agcaacttataagagcgttgaaagatggattttagaattaagagaaaacgctgatcgtaa 514 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 360 agcaacttataagagcgttgaaagatggattttagaattaagagaaaacgctgatcgtaa 419
Query: 515 cattgaaattatgttggttggtaacaagagtgatttaagacacttacgtgaagtttcaac 574 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 420 cattgaaattatgttggttggtaacaagagtgatttaagacacttacgtgaagtttcaac 479
Query: 575 tgatgaagccaaagaattttcagaaaaacataaacttacttttattgaaacatctgcact 634 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 480 tgatgaagccaaagaattttcagaaaaacataaacttacttttattgaaacatctgcact 539
Query: 635 tgattcaagcaatgtagaattagccttccaaaatattt 672 |||||||||||||||||||||||||||||||||||||| Sbjct: 540 tgattcaagcaatgtagaattagccttccaaaatattt 577
Score = 278 bits (140), Expect(2) = 0.0 Identities = 140/140 (100%) Strand = Plus / Plus
Query: 672 tattttaactcaaatttatcacattatgagccgtccaagccattcaactggtccacaaac 731 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 573 tattttaactcaaatttatcacattatgagccgtccaagccattcaactggtccacaaac 632
Query: 732 tacaattgattcaaacaccgaaaccattatattaccaaccacctctgaaccaccagccgc 791 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 633 tacaattgattcaaacaccgaaaccattatattaccaaccacctctgaaccaccagccgc 692
Query: 792 caaatctggttgttgttaaa 811 |||||||||||||||||||| Sbjct: 693 caaatctggttgttgttaaa 712
Lambda K H 1.37 0.711 1.31
Matrix: blastn matrix:1 -3 Number of Sequences: 92845959 Number of Hits to DB: 816,404,310 Number of extensions: 49360635 Number of successful extensions: 4203071 Number of sequences better than 10.0: 2984 Length of query: 910 Length of database: 95,242,211,685 Length adjustment: 24 Effective length of query: 886 Effective length of database: 97,308,875,965 Effective search space: 86215664104990 Effective search space used: 86215664104990 X1: 11 (21.8 bits) S2: 22 (44.1 bits)
|
protein update |
2009. 7. 9 |
Homology vs Protein |
Query= Contig-U14031-1 (Contig-U14031-1Q) /CSM_Contig/Contig-U14031-1Q.Seq.d (910 letters)
Database: nrp_B 3,236,559 sequences; 1,051,180,864 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
(P36412) RecName: Full=Ras-related protein Rab-11A; &U02925_1(U... 332 e-112 DQ157704_1(DQ157704|pid:none) Aiptasia pulchella Rab11 protein m... 271 7e-74 AL670003_2(AL670003|pid:none) Neurospora crassa DNA linkage grou... 261 1e-72 DQ414564_1(DQ414564|pid:none) Suberites domuncula Rab11 gene, co... 266 3e-72 BC055141_1(BC055141|pid:none) Danio rerio zgc:63565, mRNA (cDNA ... 271 1e-71 AB035354_1(AB035354|pid:none) Drosophila melanogaster mRNA for D... 271 2e-71 AJ851582_1(AJ851582|pid:none) Gallus gallus mRNA for hypothetica... 270 5e-71 BC082421_1(BC082421|pid:none) Xenopus laevis hypothetical LOC494... 270 5e-71 AY220456_1(AY220456|pid:none) Limulus polyphemus rab11-2 mRNA, c... 270 5e-71 AY220748_1(AY220748|pid:none) Limulus polyphemus Rab11-1c mRNA, ... 270 5e-71 (P22129) RecName: Full=Ras-related protein Rab-11B; AltName: Ful... 270 5e-71 EU244432_1(EU244432|pid:none) Capra hircus RAB11B (rab11b) mRNA,... 270 6e-71 AY894025_1(AY894025|pid:none) Synthetic construct Homo sapiens c... 270 6e-71 EF560724_1(EF560724|pid:none) Homo sapiens clone DKFZp564C1023 R... 270 6e-71 (P46638) RecName: Full=Ras-related protein Rab-11B; &A55005(A55... 270 6e-71 AK297498_1(AK297498|pid:none) Homo sapiens cDNA FLJ61134 complet... 270 6e-71 CR541691_1(CR541691|pid:none) Homo sapiens full open reading fra... 270 6e-71 BT056265_1(BT056265|pid:none) Drosophila melanogaster FI09227 fu... 270 6e-71 (O35509) RecName: Full=Ras-related protein Rab-11B; &(Q15907) R... 270 6e-71 AY220749_1(AY220749|pid:none) Limulus polyphemus Rab11-1a mRNA, ... 269 8e-71 BT001785_1(BT001785|pid:none) Drosophila melanogaster RH21315 fu... 269 8e-71 BC087498_1(BC087498|pid:none) Xenopus laevis hypothetical LOC496... 269 1e-70 BC048889_1(BC048889|pid:none) Danio rerio RAB11B, member RAS onc... 269 1e-70 AF127669_1(AF127669|pid:none) Mus musculus small GTPase (Rab11a)... 269 1e-70 BC075268_1(BC075268|pid:none) Xenopus tropicalis RAB11B, member ... 269 1e-70 CP001160_488(CP001160|pid:none) Thalassiosira pseudonana CCMP133... 266 1e-70 BT077510_1(BT077510|pid:none) Lepeophtheirus salmonis Pacific fo... 266 1e-70 BC152630_1(BC152630|pid:none) Danio rerio zgc:92772, mRNA (cDNA ... 268 1e-70 CR536494_1(CR536494|pid:none) Homo sapiens full open reading fra... 268 1e-70 BC076247_1(BC076247|pid:none) Danio rerio zgc:92772, mRNA (cDNA ... 268 1e-70 BC041250_1(BC041250|pid:none) Xenopus laevis RAB11B, member RAS ... 268 1e-70 AF003139_1(AF003139|pid:none) Caenorhabditis elegans cosmid F53G... 268 2e-70 BT049157_1(BT049157|pid:none) Salmo salar clone ssal-rgb2-591-24... 268 2e-70 JC2487(JC2487) GTP-binding protein H-YPT3 - human &X79780_1(X79... 268 2e-70 BT045814_1(BT045814|pid:none) Salmo salar clone ssal-rgf-532-060... 267 3e-70 BC081187_1(BC081187|pid:none) Xenopus laevis MGC84419 protein, m... 267 4e-70 (Q2TA29) RecName: Full=Ras-related protein Rab-11A; &BC111143_1... 266 5e-70 CU638743_340(CU638743|pid:none) Podospora anserina genomic DNA c... 261 4e-69 AM920437_2206(AM920437|pid:none) Penicillium chrysogenum Wiscons... 263 5e-69 AM269968_23(AM269968|pid:none) Aspergillus niger contig An01c021... 263 8e-69 (Q39572) RecName: Full=Ras-related protein YPTC6; &JC4108(JC410... 258 3e-68 EF678326_1(EF678326|pid:none) Picea sitchensis clone WS02914_M23... 259 1e-67 AY099331_1(AY099331|pid:none) Periplaneta americana Rab11 mRNA, ... 254 3e-66 EF145933_1(EF145933|pid:none) Populus trichocarpa clone WS0114_G... 254 3e-66 BX649327_6(BX649327|pid:none) Zebrafish DNA sequence from clone ... 254 3e-66 (Q40193) RecName: Full=Ras-related protein Rab11C; &Z73951_1(Z7... 249 5e-66 EU954271_1(EU954271|pid:none) Zea mays clone 1460642 ras-related... 253 6e-66 AY632359_2(AY632359|pid:none) Gossypium hirsutum BAC 155C17, com... 249 1e-65 GN106045_1(GN106045|pid:none) Sequence 10826 from Patent WO20090... 244 1e-65 GN106085_1(GN106085|pid:none) Sequence 10866 from Patent WO20090... 243 1e-65 AC140549_17(AC140549|pid:none) Medicago truncatula clone mth2-28... 252 1e-65 EU626442_7(EU626442|pid:none) Gossypium raimondii clone BAC 031J... 249 2e-65 BT036850_1(BT036850|pid:none) Zea mays full-length cDNA clone ZM... 249 3e-65 AL021710_9(AL021710|pid:none) Arabidopsis thaliana DNA chromosom... 244 3e-65 AM462529_1(AM462529|pid:none) Vitis vinifera contig VV78X101776.... 241 3e-65 EU626443_5(EU626443|pid:none) Gossypioides kirkii clone BAC 096G... 248 4e-65 AC124143_12(AC124143|pid:none) Oryza sativa (japonica cultivar-g... 243 4e-65 EF144948_1(EF144948|pid:none) Populus trichocarpa clone WS0111_B... 244 6e-65 EU162609_23(EU162609|pid:none) Cleome spinosa clone contig83 BAC... 249 7e-65 BT069763_1(BT069763|pid:none) Zea mays full-length cDNA clone ZM... 249 7e-65 EU965206_1(EU965206|pid:none) Zea mays clone 284484 ras-related ... 249 7e-65 GN106065_1(GN106065|pid:none) Sequence 10846 from Patent WO20090... 240 7e-65 AC084818_20(AC084818|pid:none) Oryza sativa (japonica cultivar-g... 249 9e-65 AP008215_340(AP008215|pid:none) Oryza sativa (japonica cultivar-... 243 1e-64 AK071461_1(AK071461|pid:none) Oryza sativa Japonica Group cDNA c... 243 1e-64 BT037150_1(BT037150|pid:none) Zea mays full-length cDNA clone ZM... 248 2e-64 AM433288_1(AM433288|pid:none) Vitis vinifera contig VV78X079268.... 240 2e-64 BT035344_1(BT035344|pid:none) Zea mays full-length cDNA clone ZM... 243 3e-64 (Q39434) RecName: Full=Ras-related protein Rab2BV; &T14566(T145... 247 3e-64 BT039216_1(BT039216|pid:none) Zea mays full-length cDNA clone ZM... 240 4e-64 BT033192_1(BT033192|pid:none) Zea mays full-length cDNA clone ZM... 247 4e-64 AM484190_1(AM484190|pid:none) Vitis vinifera contig VV78X052697.... 247 4e-64 AF532625_1(AF532625|pid:none) Glycine max GTP-binding protein mR... 244 5e-64 AY904354_1(AY904354|pid:none) Gracilariopsis lemaneiformis small... 246 6e-64 AC093018_9(AC093018|pid:none) Oryza sativa chromosome 3 BAC OSJN... 246 1e-63 EU958646_1(EU958646|pid:none) Zea mays clone 1707478 ras-related... 246 1e-63 AB169492_1(AB169492|pid:none) Macaca fascicularis brain cDNA, cl... 245 2e-63 AK071303_1(AK071303|pid:none) Oryza sativa Japonica Group cDNA c... 245 2e-63 AB015472_10(AB015472|pid:none) Arabidopsis thaliana genomic DNA,... 245 2e-63 AY690483_1(AY690483|pid:none) Triticum aestivum rab GTP-binding ... 239 2e-63 AM432734_2(AM432734|pid:none) Vitis vinifera contig VV78X219500.... 244 2e-63 CU928171_64(CU928171|pid:none) Kluyveromyces thermotolerans stra... 244 4e-63 AM471469_2(AM471469|pid:none) Vitis vinifera contig VV78X014719.... 243 4e-63 CU928181_338(CU928181|pid:none) Zygosaccharomyces rouxii strain ... 243 8e-63 GN105993_1(GN105993|pid:none) Sequence 10774 from Patent WO20090... 242 1e-62 AY585950_1(AY585950|pid:none) Paxillus involutus strain ATCC 200... 242 1e-62 EF086736_1(EF086736|pid:none) Picea sitchensis clone WS02731_C01... 242 1e-62 (Q9FK68) RecName: Full=Ras-related protein RABA1c; &AB012245_16... 241 1e-62 AK060095_1(AK060095|pid:none) Oryza sativa Japonica Group cDNA c... 241 2e-62 AC130603_13(AC130603|pid:none) Oryza sativa (japonica cultivar-g... 241 2e-62 Z73956_1(Z73956|pid:none) L.japonicus mRNA for small GTP-binding... 232 2e-62 AY815506_1(AY815506|pid:none) Schistosoma japonicum SJCHGC02859 ... 241 3e-62 CR762386_2(CR762386|pid:none) Zebrafish DNA sequence from clone ... 241 3e-62 AB016890_5(AB016890|pid:none) Arabidopsis thaliana genomic DNA, ... 241 3e-62 CR380949_94(CR380949|pid:none) Candida glabrata strain CBS138 ch... 241 3e-62 (Q40195) RecName: Full=Ras-related protein Rab11E; &Z73953_1(Z7... 240 3e-62 (Q39222) RecName: Full=Ras-related protein RABA1b; AltName: Full... 240 4e-62 EU952347_1(EU952347|pid:none) Zea mays clone 1278162 ras-related... 240 4e-62 BT064711_1(BT064711|pid:none) Zea mays full-length cDNA clone ZM... 240 5e-62 CR382134_161(CR382134|pid:none) Debaryomyces hansenii strain CBS... 240 5e-62 D12546_1(D12546|pid:none) Pisum sativum mRNA for GTP-binding pro... 237 6e-62 AK300008_1(AK300008|pid:none) Homo sapiens cDNA FLJ51542 complet... 239 7e-62 CR380957_399(CR380957|pid:none) Candida glabrata strain CBS138 c... 239 9e-62 (Q40523) RecName: Full=Ras-related protein Rab11A; &L29271_1(L2... 236 1e-61 FN357857_2(FN357857|pid:none) Schistosoma mansoni genome sequenc... 239 1e-61 DQ446594_1(DQ446594|pid:none) Arabidopsis thaliana clone pENTR22... 234 1e-61 FM992695_664(FM992695|pid:none) Candida dubliniensis CD36 chromo... 238 2e-61 AE016818_773(AE016818|pid:none) Ashbya gossypii (= Eremothecium ... 238 2e-61 (Q01111) RecName: Full=Ras-related protein YPT3; &S23523(S23523... 238 2e-61 (Q40194) RecName: Full=Ras-related protein Rab11D; &Z73952_1(Z7... 237 2e-61 AF030183_1(AF030183|pid:none) Entamoeba histolytica GTP-binding ... 238 3e-61 (Q40723) RecName: Full=Ras-related protein RGP2; AltName: Full=G... 238 3e-61 AF532626_1(AF532626|pid:none) Glycine max small GTP-binding prot... 238 3e-61 AC010155_2(AC010155|pid:none) Genomic sequence for Arabidopsis t... 236 3e-61 AY084274_1(AY084274|pid:none) Arabidopsis thaliana clone 102017 ... 237 3e-61 AC138015_11(AC138015|pid:none) Medicago truncatula clone mth2-34... 237 5e-61 (P51996) RecName: Full=GTP-binding protein YPT32/YPT11; AltName:... 237 5e-61 BT038097_1(BT038097|pid:none) Zea mays full-length cDNA clone ZM... 236 6e-61 (P38555) RecName: Full=GTP-binding protein YPT31/YPT8; AltName: ... 236 8e-61 AB241229_1(AB241229|pid:none) Pyrsonympha grandis RsSmRab11_1 mR... 236 1e-60 BT074063_1(BT074063|pid:none) Oncorhynchus mykiss clone omyk-evo... 236 1e-60 AJ245570_1(AJ245570|pid:none) Lycopersicon esculentum mRNA for R... 236 1e-60 FN314406_1(FN314406|pid:none) Schistosoma japonicum isolate Anhu... 235 1e-60 AY815772_1(AY815772|pid:none) Schistosoma japonicum SJCHGC09130 ... 235 1e-60 FN314407_1(FN314407|pid:none) Schistosoma japonicum isolate Anhu... 235 1e-60 GN106149_1(GN106149|pid:none) Sequence 10930 from Patent WO20090... 234 2e-60 GN106119_1(GN106119|pid:none) Sequence 10900 from Patent WO20090... 234 3e-60 GN080103_1(GN080103|pid:none) Sequence 706 from Patent WO2009027... 234 3e-60 AC140545_16(AC140545|pid:none) Medicago truncatula clone mth2-11... 234 4e-60 Z71276_1(Z71276|pid:none) M.indica mRNA for small GTPase. 234 4e-60 CR954202_213(CR954202|pid:none) Ostreococcus tauri strain OTTH05... 233 5e-60 AK111561_1(AK111561|pid:none) Oryza sativa Japonica Group cDNA c... 233 9e-60 CP000582_359(CP000582|pid:none) Ostreococcus lucimarinus CCE9901... 232 1e-59 FN392319_1319(FN392319|pid:none) Pichia pastoris GS115 chromosom... 231 2e-59 BT084300_1(BT084300|pid:none) Zea mays full-length cDNA clone ZM... 231 2e-59 BT057635_1(BT057635|pid:none) Salmo salar clone ssal-eve-504-180... 230 6e-59 CR382122_22(CR382122|pid:none) Kluyveromyces lactis strain NRRL ... 227 4e-58 BT075660_1(BT075660|pid:none) Osmerus mordax clone omor-eva-509-... 226 8e-58 AB024025_4(AB024025|pid:none) Arabidopsis thaliana genomic DNA, ... 223 2e-57 BT073832_1(BT073832|pid:none) Oncorhynchus mykiss clone omyk-evo... 225 2e-57 BT068335_1(BT068335|pid:none) Zea mays full-length cDNA clone ZM... 224 2e-57 D12542_1(D12542|pid:none) Pisum sativum mRNA for GTP-binding pro... 223 5e-57 AF274025_1(AF274025|pid:none) Homo sapiens GTP-binding protein R... 223 7e-57 AF083124_1(AF083124|pid:none) Homo sapiens CATX-8 mRNA, complete... 223 7e-57 CR932518_1(CR932518|pid:none) Paramecium tetraurelia, Small GTPa... 223 7e-57 BT037200_1(BT037200|pid:none) Zea mays full-length cDNA clone ZM... 223 9e-57 (P46629) RecName: Full=Ras-related protein Rab-25; &A48500(A485... 222 2e-56 (P25766) RecName: Full=Ras-related protein RGP1; AltName: Full=G... 221 2e-56 BT043430_1(BT043430|pid:none) Zea mays full-length cDNA clone ZM... 221 2e-56 BC120091_1(BC120091|pid:none) Bos taurus RAB25, member RAS oncog... 221 3e-56 (Q58DW6) RecName: Full=Ras-related protein Rab-25; &BT021481_1(... 221 3e-56 BT051415_1(BT051415|pid:none) Medicago truncatula clone MTYF1_F2... 221 3e-56 BC086715_1(BC086715|pid:none) Danio rerio RAB25, member RAS onco... 220 4e-56 BX890617_2(BX890617|pid:none) Zebrafish DNA sequence from clone ... 220 4e-56 (Q40191) RecName: Full=Ras-related protein Rab11A; &Z73949_1(Z7... 220 6e-56 AM438608_1(AM438608|pid:none) Vitis vinifera contig VV78X052328.... 213 7e-56 AC007508_21(AC007508|pid:none) Genomic sequence for Arabidopsis ... 218 7e-56 CR933429_1(CR933429|pid:none) Paramecium tetraurelia, Small GTPa... 219 8e-56 (Q9WTL2) RecName: Full=Ras-related protein Rab-25; &AB232620_1(... 219 1e-55 AY088624_1(AY088624|pid:none) Arabidopsis thaliana clone 8545 mR... 218 2e-55 DQ019037_1(DQ019037|pid:none) Trichomonas vaginalis strain G3 sm... 218 2e-55 AL035708_16(AL035708|pid:none) Arabidopsis thaliana DNA chromoso... 218 2e-55 BC168745_1(BC168745|pid:none) Rattus norvegicus RAB25, member RA... 218 2e-55 U46926_1(U46926|pid:none) Arabidopsis thaliana GTP-binding prote... 218 2e-55 AC155344_30(AC155344|pid:none) Brassica rapa subsp. pekinensis c... 218 3e-55 AB470307_1(AB470307|pid:none) Nicotiana tabacum NtRab11D mRNA fo... 218 3e-55 AC183494_13(AC183494|pid:none) Brassica oleracea Contig C, compl... 209 4e-55 AK102491_1(AK102491|pid:none) Oryza sativa Japonica Group cDNA c... 214 4e-55 AM459225_1(AM459225|pid:none) Vitis vinifera contig VV78X087264.... 217 5e-55 AB025628_11(AB025628|pid:none) Arabidopsis thaliana genomic DNA,... 209 8e-55 D31905_1(D31905|pid:none) Zea mays mRNA for mgp1 GTP-binding pro... 216 1e-54 AC183493_10(AC183493|pid:none) Brassica oleracea Contig B, compl... 206 2e-54 EF085830_1(EF085830|pid:none) Picea sitchensis clone WS0286_P20 ... 215 2e-54 Z93391_3(Z93391|pid:none) Caenorhabditis elegans Cosmid W04G5, c... 214 2e-54 (Q550H6) RecName: Full=Ras-related protein Rab-11C; 214 4e-54 EF083999_1(EF083999|pid:none) Picea sitchensis clone WS0281_E05 ... 214 4e-54 AC183495_20(AC183495|pid:none) Brassica oleracea Contig A, compl... 207 7e-54 BT035582_1(BT035582|pid:none) Zea mays full-length cDNA clone ZM... 213 7e-54 AB013395_22(AB013395|pid:none) Arabidopsis thaliana genomic DNA,... 213 9e-54 (Q40520) RecName: Full=Ras-related protein Rab11C; &L29268_1(L2... 212 2e-53 AC069472_3(AC069472|pid:none) Arabidopsis thaliana chromosome 3 ... 211 2e-53 AY815497_1(AY815497|pid:none) Schistosoma japonicum SJCHGC05511 ... 211 4e-53 EF677765_1(EF677765|pid:none) Picea sitchensis clone WS02774_L10... 211 4e-53 EU951907_1(EU951907|pid:none) Zea mays clone 1062297 ras-related... 210 5e-53 S45023(S45023) GTP-binding protein Rab - alfalfa &X79278_1(X792... 210 6e-53 AK134125_1(AK134125|pid:none) Mus musculus adult male thymus cDN... 210 6e-53 AB197058_1(AB197058|pid:none) Entamoeba histolytica gene for sma... 209 8e-53 AB482179_1(AB482179|pid:none) Babesia bigemina Rab11 mRNA for sm... 209 8e-53 BT071033_1(BT071033|pid:none) Picea sitchensis clone WS02766_M18... 209 1e-52 (P19892) RecName: Full=Ras-related protein ARA-1; &AC009999_8(A... 207 3e-52 BT006190_1(BT006190|pid:none) Arabidopsis thaliana clone C00163 ... 207 3e-52 CR932582_1(CR932582|pid:none) Paramecium tetraurelia, Small GTPa... 207 4e-52 Z73955_1(Z73955|pid:none) L.japonicus mRNA for small GTP-binding... 206 7e-52 AC007071_20(AC007071|pid:none) Arabidopsis thaliana chromosome 2... 205 1e-51 BT051823_1(BT051823|pid:none) Medicago truncatula clone MTYF5_F6... 204 3e-51 AJ697970_1(AJ697970|pid:none) Medicago sativa rab11f gene for sm... 204 3e-51 L12395_1(L12395|pid:none) Brassica napus small GTP-binding prote... 204 3e-51 D12541_1(D12541|pid:none) Pisum sativum mRNA for GTP-binding pro... 204 4e-51 S41432(S41432)GTP-binding protein, ras-like (clone vfa-yptx) - f... 203 7e-51 AC069473_2(AC069473|pid:none) Arabidopsis thaliana chromosome 3 ... 202 2e-50 AC034107_21(AC034107|pid:none) Sequence of BAC T10F20 from Arabi... 202 2e-50 AK228658_1(AK228658|pid:none) Arabidopsis thaliana mRNA for hypo... 202 2e-50 L29272_1(L29272|pid:none) Nicotiana tabacum SR1 Nt-rab11e mRNA, ... 201 3e-50 AC012679_5(AC012679|pid:none) Arabidopsis thaliana chromosome 1 ... 201 4e-50 AP003614_3(AP003614|pid:none) Oryza sativa Japonica Group genomi... 200 5e-50 AC117075_79(AC117075|pid:none) Dictyostelium discoideum chromoso... 200 5e-50 BT079779_1(BT079779|pid:none) Esox lucius clone eluc-evq-513-136... 199 8e-50 Z73950_1(Z73950|pid:none) L.japonicus mRNA for small GTP-binding... 199 1e-49 (P28187) RecName: Full=Ras-related protein ARA-4; &AC004450_5(A... 199 1e-49 CR940347_17(CR940347|pid:none) Theileria annulata strain Ankara ... 197 3e-49 DQ825390_1(DQ825390|pid:none) Theileria parva strain Muguga smal... 197 3e-49 AC023628_1(AC023628|pid:none) Arabidopsis thaliana chromosome I ... 196 1e-48 CR933456_1(CR933456|pid:none) Paramecium tetraurelia, Small GTPa... 194 4e-48 DQ810282_29(DQ810282|pid:none) Oryza brachyantha BAC 0002C07, co... 192 2e-47 CR933420_1(CR933420|pid:none) Paramecium tetraurelia, Small GTPa... 187 5e-46 AJ871359_1(AJ871359|pid:none) Nyctotherus ovalis partial gene fo... 186 9e-46 AC069551_18(AC069551|pid:none) Genomic sequence for Arabidopsis ... 186 9e-46 CR932528_1(CR932528|pid:none) Paramecium tetraurelia, Small GTPa... 184 5e-45 (Q01890) RecName: Full=Ras-like GTP-binding protein YPT1; &JC53... 182 2e-44 AJ879563_1(AJ879563|pid:none) Plasmodium falciparum mRNA for Rab... 181 4e-44 AM910994_134(AM910994|pid:none) Plasmodium knowlesi strain H chr... 180 5e-44 CR932686_1(CR932686|pid:none) Paramecium tetraurelia, Small GTPa... 179 1e-43 FN392321_231(FN392321|pid:none) Pichia pastoris GS115 chromosome... 179 1e-43 AF460175_1(AF460175|pid:none) Giardia intestinalis strain WBC6 G... 178 2e-43 D12549_1(D12549|pid:none) Pisum sativum mRNA for GTP-binding pro... 177 3e-43 EU365390_1(EU365390|pid:none) Euplotes octocarinatus Rab GTPase ... 177 4e-43 CR933388_1(CR933388|pid:none) Paramecium tetraurelia, Small GTPa... 177 4e-43 CU928171_789(CU928171|pid:none) Kluyveromyces thermotolerans str... 177 4e-43 CR380957_540(CR380957|pid:none) Candida glabrata strain CBS138 c... 177 4e-43 (P01123) RecName: Full=GTP-binding protein YPT1; AltName: Full=R... 177 6e-43 X00209_2(X00209|pid:none) Yeast YP2 gene The YP2 protein shows h... 177 6e-43 AC159435_18(AC159435|pid:none) Trypanosoma brucei chromosome 8 c... 177 6e-43 (Q2HJH2) RecName: Full=Ras-related protein Rab-1B; &BC105393_1(... 176 7e-43 CR533462_1(CR533462|pid:none) Homo sapiens full open reading fra... 176 7e-43 (Q5RE13) RecName: Full=Ras-related protein Rab-1B; &(Q9H0U4) Re... 176 7e-43 (Q9D1G1) RecName: Full=Ras-related protein Rab-1B; &AB232584_1(... 176 1e-42 CR382124_213(CR382124|pid:none) Kluyveromyces lactis strain NRRL... 176 1e-42 AM502228_126(AM502228|pid:none) Leishmania infantum chromosome 10. 176 1e-42 (P10536) RecName: Full=Ras-related protein Rab-1B; &X13905_1(X1... 176 1e-42 B86153(B86153) ARA-5 [imported] - Arabidopsis thaliana &U89959_... 176 1e-42 E42148(E42148)GTP-binding protein rab14 - rat 176 1e-42 AK042020_1(AK042020|pid:none) Mus musculus 3 days neonate thymus... 175 2e-42 BT051367_1(BT051367|pid:none) Medicago truncatula clone MTYF1_F2... 175 2e-42 (Q39570) RecName: Full=GTP-binding protein YPTC4; &JC4106(JC410... 175 2e-42 EF145603_1(EF145603|pid:none) Populus trichocarpa clone WS01126_... 175 2e-42 AF108883_1(AF108883|pid:none) Capsicum annuum small GTP-binding ... 175 2e-42 GN105859_1(GN105859|pid:none) Sequence 10640 from Patent WO20090... 175 2e-42 DQ443136_1(DQ443136|pid:none) Bombyx mori small GTP binding prot... 175 2e-42 BT052509_1(BT052509|pid:none) Medicago truncatula clone MTYFD_FE... 174 3e-42 FN357538_13(FN357538|pid:none) Schistosoma mansoni genome sequen... 174 3e-42 S06147(S06147;S03189)GTP-binding protein rab1B - rat 174 3e-42 BC150404_1(BC150404|pid:none) Danio rerio zgc:171927, mRNA (cDNA... 174 4e-42 AM494947_100(AM494947|pid:none) Leishmania braziliensis chromoso... 174 4e-42 BT034664_1(BT034664|pid:none) Zea mays full-length cDNA clone ZM... 174 5e-42 D12548_1(D12548|pid:none) Pisum sativum mRNA for GTP-binding pro... 174 5e-42 T23530(T23530) hypothetical protein K09A9.2 - Caenorhabditis ele... 174 5e-42 DQ414556_1(DQ414556|pid:none) Suberites domuncula Rab1 gene, com... 173 6e-42 AJ307662_21(AJ307662|pid:none) Oryza sativa genomic DNA fragment... 173 6e-42 S34253(S34253) GTP-binding protein, ras-related - common tobacco... 173 6e-42 BC097013_1(BC097013|pid:none) Danio rerio zgc:86773, mRNA (cDNA ... 173 6e-42 AK059888_1(AK059888|pid:none) Oryza sativa Japonica Group cDNA c... 173 6e-42 AF101310_4(AF101310|pid:none) Caenorhabditis elegans cosmid C39F... 173 6e-42 AE017352_188(AE017352|pid:none) Cryptococcus neoformans var. neo... 173 6e-42 CP001323_241(CP001323|pid:none) Micromonas sp. RCC299 chromosome... 173 6e-42 (P61017) RecName: Full=Ras-related protein Rab-4B; &(P61018) Re... 173 6e-42 GM977145_1(GM977145|pid:none) Sequence 53 from Patent WO20081456... 173 6e-42 AF408432_1(AF408432|pid:none) Mus musculus GTP-binding protein R... 173 6e-42 (Q53B90) RecName: Full=Ras-related protein Rab-43; &AY593256_1(... 173 8e-42 AL137068_10(AL137068|pid:none) Human DNA sequence from clone RP1... 173 8e-42 AB232608_1(AB232608|pid:none) Mus musculus mRNA for Rab13, compl... 173 8e-42 AY069563_1(AY069563|pid:none) Drosophila melanogaster LD29476 fu... 173 8e-42 (Q9DD03) RecName: Full=Ras-related protein Rab-13; &AK002303_1(... 173 8e-42 BT070586_1(BT070586|pid:none) Picea sitchensis clone WS02737_M21... 173 8e-42 AJ968959_1(AJ968959|pid:none) Mus musculus mRNA for RAB14 protei... 173 8e-42 GM977157_1(GM977157|pid:none) Sequence 65 from Patent WO20081456... 173 8e-42 CP000497_244(CP000497|pid:none) Pichia stipitis CBS 6054 chromos... 173 8e-42 BT045578_1(BT045578|pid:none) Salmo salar clone ssal-rgf-525-209... 173 8e-42 FM992688_325(FM992688|pid:none) Candida dubliniensis CD36 chromo... 173 8e-42 AF330211_1(AF330211|pid:none) Candida albicans small GTP-binding... 173 8e-42 (P61107) RecName: Full=Ras-related protein Rab-14; &(Q52NJ6) Re... 173 8e-42 (Q05974) RecName: Full=Ras-related protein Rab-1A; &S38339(S383... 172 1e-41 CS559708_1(CS559708|pid:none) Sequence 295 from Patent WO2006032... 172 1e-41 (P22125) RecName: Full=Ras-related protein ORAB-1; &M38393_1(M3... 172 1e-41 BT039522_1(BT039522|pid:none) Zea mays full-length cDNA clone ZM... 172 1e-41 (Q86YS6) RecName: Full=Ras-related protein Rab-43; AltName: Full... 172 1e-41 BC045374_1(BC045374|pid:none) Danio rerio RAB14, member RAS onco... 172 1e-41 CS560194_1(CS560194|pid:none) Sequence 781 from Patent WO2006032... 172 1e-41 GN105853_1(GN105853|pid:none) Sequence 10634 from Patent WO20090... 172 1e-41 (P11620) RecName: Full=GTP-binding protein ypt1; &AL136536_10(A... 172 1e-41 GN080089_1(GN080089|pid:none) Sequence 692 from Patent WO2009027... 172 1e-41 GN106197_1(GN106197|pid:none) Sequence 10978 from Patent WO20090... 172 1e-41 BC045014_1(BC045014|pid:none) Xenopus laevis RAB1, member RAS on... 172 1e-41 EU284879_1(EU284879|pid:none) TSA: Elaeis guineensis EgEfMPOB000... 172 1e-41 GN105857_1(GN105857|pid:none) Sequence 10638 from Patent WO20090... 172 1e-41 AC183496_25(AC183496|pid:none) Brassica oleracea, *** SEQUENCING... 172 1e-41 BT059700_1(BT059700|pid:none) Salmo salar clone ssal-rgf-002-342... 172 1e-41 EF091876_1(EF091876|pid:none) Solanum tuberosum ras-related GTP ... 172 1e-41 (P61019) RecName: Full=Ras-related protein Rab-2A; &(P61105) Re... 172 2e-41 (Q90965) RecName: Full=Ras-related protein Rab-2A; &S52325(S523... 172 2e-41 (Q52NJ2) RecName: Full=Ras-related protein Rab-1A; &AY996813_1(... 172 2e-41 BT043649_1(BT043649|pid:none) Salmo salar clone HM5_0924 RAB2A, ... 172 2e-41 EF103367_1(EF103367|pid:none) Haliotis discus discus Ras-related... 172 2e-41 EF144402_1(EF144402|pid:none) Populus trichocarpa clone PX0019_E... 172 2e-41 (P53994) RecName: Full=Ras-related protein Rab-2A; &AB232585_1(... 172 2e-41 GN106151_1(GN106151|pid:none) Sequence 10932 from Patent WO20090... 172 2e-41 GM977161_1(GM977161|pid:none) Sequence 69 from Patent WO20081456... 172 2e-41 (P40392) RecName: Full=Ras-related protein RIC1; &AK243597_1(AK... 171 2e-41 EF084887_1(EF084887|pid:none) Picea sitchensis clone WS0292_K24 ... 171 2e-41 AL606522_3(AL606522|pid:none) Mouse DNA sequence from clone RP23... 171 2e-41 DQ214474_1(DQ214474|pid:none) Taeniopygia guttata clone 0063P003... 171 2e-41 GN105983_1(GN105983|pid:none) Sequence 10764 from Patent WO20090... 171 2e-41 GN106013_1(GN106013|pid:none) Sequence 10794 from Patent WO20090... 171 2e-41 GN106155_1(GN106155|pid:none) Sequence 10936 from Patent WO20090... 171 2e-41 AC183493_34(AC183493|pid:none) Brassica oleracea Contig B, compl... 171 2e-41 GN106077_1(GN106077|pid:none) Sequence 10858 from Patent WO20090... 171 2e-41 GN106117_1(GN106117|pid:none) Sequence 10898 from Patent WO20090... 171 2e-41 (P62820) RecName: Full=Ras-related protein Rab-1A; AltName: Full... 171 2e-41 E71440(E71440)GTP-binding protein RAB2A - Arabidopsis thaliana 171 3e-41 BC142846_1(BC142846|pid:none) Danio rerio RAB8B, member RAS onco... 171 3e-41 GN106059_1(GN106059|pid:none) Sequence 10840 from Patent WO20090... 171 3e-41 (Q92930) RecName: Full=Ras-related protein Rab-8B; &AB038995_1(... 171 3e-41 DQ414558_1(DQ414558|pid:none) Suberites domuncula Rab2 gene, com... 171 3e-41 Z73937_1(Z73937|pid:none) L.japonicus mRNA for small GTP-binding... 171 3e-41 BC058341_1(BC058341|pid:none) Danio rerio RAB14, member RAS onco... 171 3e-41 U02927_1(U02927|pid:none) Dictyostelium discoideum Ax3 Rab4 mRNA... 171 3e-41 Z73932_1(Z73932|pid:none) L.japonicus mRNA for small GTP-binding... 171 3e-41 AL161545_37(AL161545|pid:none) Arabidopsis thaliana DNA chromoso... 171 3e-41 CP000587_71(CP000587|pid:none) Ostreococcus lucimarinus CCE9901 ... 171 4e-41 J02998_1(J02998|pid:none) Rat ras-related protein mRNA, clone NT... 171 4e-41 AE013599_198(AE013599|pid:none) Drosophila melanogaster chromoso... 171 4e-41 BT076392_1(BT076392|pid:none) Caligus rogercresseyi clone crog-e... 171 4e-41 BC124978_1(BC124978|pid:none) Xenopus laevis hypothetical protei... 171 4e-41 FN320591_1(FN320591|pid:none) Schistosoma japonicum isolate Anhu... 171 4e-41 AY223134_1(AY223134|pid:none) Schistosoma japonicum SJCHGC02833 ... 171 4e-41 EF146669_1(EF146669|pid:none) Populus trichocarpa clone WS01211_... 171 4e-41 BT077989_1(BT077989|pid:none) Lepeophtheirus salmonis Pacific fo... 171 4e-41 AY891305_1(AY891305|pid:none) Synthetic construct Homo sapiens c... 171 4e-41 BC135798_1(BC135798|pid:none) Xenopus tropicalis RAB8B, member R... 170 5e-41 (Q39571) RecName: Full=GTP-binding protein YPTC1; &DQ222936_1(D... 170 5e-41 DQ414565_1(DQ414565|pid:none) Suberites domuncula Rab14 gene, pa... 170 5e-41 AY893729_1(AY893729|pid:none) Synthetic construct Homo sapiens c... 170 5e-41 AF324990_1(AF324990|pid:none) Arabidopsis thaliana AT5g47200 (AT... 170 5e-41 S71559(S71559) GTP-binding protein rab2 - soybean &U32185_1(U32... 170 5e-41 BT057068_1(BT057068|pid:none) Salmo salar clone ssal-eve-570-039... 170 5e-41 GN106111_1(GN106111|pid:none) Sequence 10892 from Patent WO20090... 170 5e-41 (Q5KTJ6) RecName: Full=Ras-related protein Rab-13; &AB158369_1(... 170 5e-41 BC094846_1(BC094846|pid:none) Homo sapiens RAB13, member RAS onc... 170 5e-41 (Q05975) RecName: Full=Ras-related protein Rab-2; &S38341(S3834... 170 5e-41 AK151085_1(AK151085|pid:none) Mus musculus bone marrow macrophag... 170 5e-41 BC078493_1(BC078493|pid:none) Xenopus laevis MGC85265 protein, m... 170 5e-41 BC127330_1(BC127330|pid:none) Xenopus tropicalis RAB8B, member R... 170 5e-41 (P51153) RecName: Full=Ras-related protein Rab-13; AltName: Full... 170 5e-41 (Q58DS5) RecName: Full=Ras-related protein Rab-13; &BT021522_1(... 170 5e-41 BC129421_1(BC129421|pid:none) Danio rerio zgc:158741, mRNA (cDNA... 170 7e-41 BC044974_1(BC044974|pid:none) Xenopus laevis RAB4A, member RAS o... 170 7e-41 Y08425_1(Y08425|pid:none) N.plumbaginifolia mRNA for small GTP-b... 170 7e-41 DQ214475_1(DQ214475|pid:none) Taeniopygia guttata clone 0058P004... 170 7e-41 BC071068_1(BC071068|pid:none) Xenopus laevis MGC78967 protein, m... 170 7e-41 AE016815_434(AE016815|pid:none) Ashbya gossypii (= Eremothecium ... 170 7e-41 AP008208_2028(AP008208|pid:none) Oryza sativa (japonica cultivar... 170 7e-41 EF710656_1(EF710656|pid:none) Glyptapanteles indiensis clone BAC... 170 7e-41 CR382130_329(CR382130|pid:none) Yarrowia lipolytica strain CLIB1... 169 9e-41 CR954207_70(CR954207|pid:none) Ostreococcus tauri strain OTTH059... 169 9e-41 AK059799_1(AK059799|pid:none) Oryza sativa Japonica Group cDNA c... 169 9e-41 DQ372931_1(DQ372931|pid:none) Pinus pinaster Rab1 mRNA, complete... 169 9e-41 AY060495_1(AY060495|pid:none) Arabidopsis thaliana AT4g17530/dl4... 169 9e-41 EF086613_1(EF086613|pid:none) Picea sitchensis clone WS02920_I20... 169 9e-41 BT037824_1(BT037824|pid:none) Zea mays full-length cDNA clone ZM... 169 9e-41 AB112933_1(AB112933|pid:none) Drosophila melanogaster rab8 mRNA ... 169 9e-41 D38625(D38625)GTP-binding protein o-rab1 - electric ray (Discopy... 169 1e-40 AK129477_1(AK129477|pid:none) Mus musculus mRNA for mKIAA3012 pr... 169 1e-40 GN106165_1(GN106165|pid:none) Sequence 10946 from Patent WO20090... 169 1e-40 (P34139) RecName: Full=Ras-related protein Rab-1A; 169 1e-40 AF217985_1(AF217985|pid:none) Homo sapiens clone PP1596 unknown ... 169 1e-40 (P49103) RecName: Full=Ras-related protein Rab-2-A; &T02242(T02... 169 1e-40 (P49104) RecName: Full=Ras-related protein Rab-2-B; &BT068076_1... 169 2e-40 AF468652_1(AF468652|pid:none) Homo sapiens RAB2B mRNA, complete ... 169 2e-40 DQ397202_1(DQ397202|pid:none) Saccharum officinarum small GTP bi... 169 2e-40 AB076904_1(AB076904|pid:none) Ciona intestinalis Ci-rab2 mRNA fo... 169 2e-40 BC134059_1(BC134059|pid:none) Danio rerio RAB8A, member RAS onco... 169 2e-40 BX647601_1(BX647601|pid:none) Homo sapiens mRNA; cDNA DKFZp313C1... 169 2e-40 BT080552_1(BT080552|pid:none) Caligus clemensi clone ccle-evs-51... 168 2e-40 BC118271_1(BC118271|pid:none) Bos taurus RAB2A, member RAS oncog... 168 2e-40 BT081291_1(BT081291|pid:none) Caligus clemensi clone ccle-evs-51... 168 2e-40 CR932696_1(CR932696|pid:none) Paramecium tetraurelia, Small GTPa... 168 2e-40 AB463206_1(AB463206|pid:none) Synthetic construct DNA, clone: pF... 168 2e-40 AC161399_25(AC161399|pid:none) Medicago truncatula chromosome 2 ... 168 2e-40 AJ810707_1(AJ810707|pid:none) Poa pratensis mRNA for RAB1-like (... 168 2e-40 AJ518934_1(AJ518934|pid:none) Hordeum vulgare subsp. vulgare mRN... 168 2e-40 AF083256_1(AF083256|pid:none) Sporobolus stapfianus small GTP bi... 168 2e-40 BC110198_1(BC110198|pid:none) Bos taurus RAB4A, member RAS oncog... 168 2e-40 AF087861_1(AF087861|pid:none) Homo sapiens rab4b mRNA, complete ... 168 2e-40 L35845_1(L35845|pid:none) Oryza sativa small GTP-binding protein... 168 2e-40 AJ278659_1(AJ278659|pid:none) Aspergillus niger srgB gene for a ... 168 2e-40 (Q2HJI8) RecName: Full=Ras-related protein Rab-8B; &BC105330_1(... 168 2e-40 T33855(T33855)hypothetical protein D1037.4 - Caenorhabditis eleg... 168 2e-40 AJ308736_1(AJ308736|pid:none) Plasmodium falciparum mRNA for put... 168 2e-40 CR932639_1(CR932639|pid:none) Paramecium tetraurelia, Small GTPa... 168 2e-40 AB112929_1(AB112929|pid:none) Caenorhabditis elegans rab8 mRNA f... 168 2e-40 BT070553_1(BT070553|pid:none) Picea sitchensis clone WS02735_N04... 168 2e-40 BT078127_1(BT078127|pid:none) Lepeophtheirus salmonis Pacific fo... 168 3e-40 (P33723) RecName: Full=GTP-binding protein ypt1; &AL356324_15(A... 168 3e-40 EF144593_1(EF144593|pid:none) Populus trichocarpa clone WS01111_... 168 3e-40 GN080095_1(GN080095|pid:none) Sequence 698 from Patent WO2009027... 168 3e-40 (Q92928) RecName: Full=Putative Ras-related protein Rab-1C; ... 168 3e-40 BC077886_1(BC077886|pid:none) Xenopus laevis RAB14, member RAS o... 168 3e-40 GN106121_1(GN106121|pid:none) Sequence 10902 from Patent WO20090... 168 3e-40 AJ277108_1(AJ277108|pid:none) Trichoderma reesei ypt1 gene for s... 168 3e-40 AB035352_1(AB035352|pid:none) Drosophila melanogaster mRNA for D... 168 3e-40 EF576151_1(EF576151|pid:none) Oryza sativa (indica cultivar-grou... 160 3e-40 BC107443_1(BC107443|pid:none) Rattus norvegicus RAB2B, member RA... 167 3e-40 AF244545_1(AF244545|pid:none) Aspergillus awamori YptA (yptA) ge... 167 3e-40 (P22128) RecName: Full=Ras-related protein Rab-8; AltName: Full=... 167 3e-40 BT071594_1(BT071594|pid:none) Picea sitchensis clone WS02926_J12... 167 3e-40 BC054719_1(BC054719|pid:none) Mus musculus RAB2B, member RAS onc... 167 3e-40 (P59279) RecName: Full=Ras-related protein Rab-2B; &AB232586_1(... 167 3e-40 AF013572_1(AF013572|pid:none) Bombyx mori small GTP-binding prot... 167 3e-40 AK297598_1(AK297598|pid:none) Homo sapiens cDNA FLJ52970 complet... 167 3e-40 AE014297_3082(AE014297|pid:none) Drosophila melanogaster chromos... 167 3e-40 (P20790) RecName: Full=Ras-related protein Rab-8A; AltName: Full... 167 5e-40 BT077861_1(BT077861|pid:none) Lepeophtheirus salmonis Pacific fo... 167 5e-40 GM977149_1(GM977149|pid:none) Sequence 57 from Patent WO20081456... 167 5e-40 (Q559X6) RecName: Full=Ras-related protein Rab-2B; &AC116921_8(... 167 5e-40 BT076429_1(BT076429|pid:none) Caligus rogercresseyi clone crog-e... 167 5e-40 EU116937_1(EU116937|pid:none) Aiptasia pulchella small GTP-bindi... 167 5e-40 AC159407_36(AC159407|pid:none) Trypanosoma brucei chromosome 8 c... 167 5e-40 GN080135_1(GN080135|pid:none) Sequence 738 from Patent WO2009027... 167 5e-40 S01766(S01766;D39963)GTP-binding protein rab4 - rat 167 6e-40 BT076415_1(BT076415|pid:none) Caligus rogercresseyi clone crog-e... 167 6e-40 AY370774_1(AY370774|pid:none) Trypanosoma brucei strain Lister 4... 167 6e-40 EU810302_1(EU810302|pid:none) Gymnochlora stellata Ras-related s... 167 6e-40 BT077899_1(BT077899|pid:none) Lepeophtheirus salmonis Pacific fo... 167 6e-40 (P20338) RecName: Full=Ras-related protein Rab-4A; 167 6e-40 AM910992_200(AM910992|pid:none) Plasmodium knowlesi strain H chr... 166 8e-40 (Q9TVU5) RecName: Full=Ras-related protein Rab-1; AltName: Full=... 166 8e-40 GN105977_1(GN105977|pid:none) Sequence 10758 from Patent WO20090... 166 8e-40 AC140549_18(AC140549|pid:none) Medicago truncatula clone mth2-28... 166 1e-39 BC138508_1(BC138508|pid:none) Mus musculus RAB4A, member RAS onc... 166 1e-39 D12547_1(D12547|pid:none) Pisum sativum mRNA for GTP-binding pro... 166 1e-39 (P20791) RecName: Full=Ras-related protein Rab-8B; AltName: Full... 166 1e-39 AK169657_1(AK169657|pid:none) Mus musculus 2 days neonate thymus... 165 2e-39 FN357536_6(FN357536|pid:none) Schistosoma mansoni genome sequenc... 165 2e-39 CR932579_1(CR932579|pid:none) Paramecium tetraurelia, Small GTPa... 165 2e-39 (P35280) RecName: Full=Ras-related protein Rab-8A; &(P55258) Re... 165 2e-39 L48181_1(L48181|pid:none) Brassica campestris L. pekinensis ypt-... 165 2e-39 (Q5R4A3) RecName: Full=Ras-related protein Rab-8A; &CR861352_1(... 165 2e-39 S53268_1(S53268|pid:none) Homo sapiens RAS-related protein MEL (... 165 2e-39 (P34140) RecName: Full=Ras-related protein Rab-1B; 165 2e-39 I78851(I78851) GTP-binding protein MEL - mouse &S53270_1(S53270... 165 2e-39 AY892042_1(AY892042|pid:none) Synthetic construct Homo sapiens c... 165 2e-39 L12031_1(L12031|pid:none) Leishmania major V121 GTP-binding prot... 165 2e-39 CR932818_1(CR932818|pid:none) Paramecium tetraurelia, Small GTPa... 165 2e-39 AK147178_1(AK147178|pid:none) Mus musculus 17 days pregnant adul... 165 2e-39 CR933417_1(CR933417|pid:none) Paramecium tetraurelia, Small GTPa... 165 2e-39 AY324134_1(AY324134|pid:none) Babesia bovis Rab1a mRNA, complete... 165 2e-39 BT044417_1(BT044417|pid:none) Drosophila melanogaster FI09101 fu... 165 2e-39 GN106061_1(GN106061|pid:none) Sequence 10842 from Patent WO20090... 165 2e-39 BT035355_1(BT035355|pid:none) Zea mays full-length cDNA clone ZM... 165 2e-39 E34323(E34323) GTP-binding protein Rab4 - human &M28211_1(M2821... 165 2e-39 CR932630_1(CR932630|pid:none) Paramecium tetraurelia, Small GTPa... 165 2e-39 DQ311306_1(DQ311306|pid:none) Bombyx mori ras-related GTP-bindin... 165 2e-39 CR932694_1(CR932694|pid:none) Paramecium tetraurelia, Small GTPa... 164 3e-39 DQ286060_1(DQ286060|pid:none) Hydra vulgaris RAS related GTP-bin... 164 3e-39 AB170418_1(AB170418|pid:none) Macaca fascicularis brain cDNA clo... 164 3e-39 AM494964_85(AM494964|pid:none) Leishmania braziliensis chromosom... 164 3e-39 AK104346_1(AK104346|pid:none) Oryza sativa Japonica Group cDNA c... 164 3e-39 AY851657_1(AY851657|pid:none) Triticum aestivum small GTP-bindin... 164 3e-39 FN357316_32(FN357316|pid:none) Schistosoma mansoni genome sequen... 164 3e-39 GN106103_1(GN106103|pid:none) Sequence 10884 from Patent WO20090... 164 4e-39 (P36409) RecName: Full=Ras-related protein Rab-2A; 164 4e-39 GM977167_1(GM977167|pid:none) Sequence 75 from Patent WO20081456... 164 4e-39 GN106091_1(GN106091|pid:none) Sequence 10872 from Patent WO20090... 164 4e-39 S57478(S57478) GTP-binding protein GTP13 - garden pea &Z49902_1... 164 4e-39 GN106033_1(GN106033|pid:none) Sequence 10814 from Patent WO20090... 164 4e-39 CR940347_347(CR940347|pid:none) Theileria annulata strain Ankara... 164 5e-39 EF147099_1(EF147099|pid:none) Populus trichocarpa clone WS01227_... 164 5e-39 FN315276_1(FN315276|pid:none) Schistosoma japonicum isolate Anhu... 164 5e-39 CR932657_1(CR932657|pid:none) Paramecium tetraurelia, Small GTPa... 164 5e-39 EU069501_1(EU069501|pid:none) Gymnochlora stellata Rab1A1 mRNA, ... 164 5e-39 GN105821_1(GN105821|pid:none) Sequence 10602 from Patent WO20090... 164 5e-39 (Q9ZRE2) RecName: Full=Ras-related protein RABD1; AltName: Full=... 164 5e-39 GN105981_1(GN105981|pid:none) Sequence 10762 from Patent WO20090... 164 5e-39 BT070448_1(BT070448|pid:none) Picea sitchensis clone WS0272_O15 ... 163 7e-39 BT080187_1(BT080187|pid:none) Caligus clemensi clone ccle-evs-50... 163 7e-39 BT077352_1(BT077352|pid:none) Lepeophtheirus salmonis Pacific fo... 163 7e-39 CR382138_325(CR382138|pid:none) Debaryomyces hansenii strain CBS... 163 8e-39 FN357297_79(FN357297|pid:none) Schistosoma mansoni genome sequen... 163 8e-39 AC104285_6(AC104285|pid:none) Oryza sativa (japonica cultivar-gr... 163 8e-39 BC009227_1(BC009227|pid:none) Homo sapiens RAB13, member RAS onc... 163 8e-39 AB079020_1(AB079020|pid:none) Nicotiana tabacum mRNA for ras-rel... 163 8e-39 D01027_1(D01027|pid:none) Arabidopsis thaliana mRNA for small GT... 162 1e-38 AL161545_36(AL161545|pid:none) Arabidopsis thaliana DNA chromoso... 162 1e-38 GN106049_1(GN106049|pid:none) Sequence 10830 from Patent WO20090... 162 1e-38 AC125368_16(AC125368|pid:none) Medicago truncatula clone mth2-13... 162 1e-38 GM977117_1(GM977117|pid:none) Sequence 25 from Patent WO20081456... 162 1e-38 AC117265_12(AC117265|pid:none) Oryza sativa (japonica cultivar-g... 162 1e-38 CR932637_1(CR932637|pid:none) Paramecium tetraurelia, Small GTPa... 162 1e-38 B38625(B38625)GTP-binding protein ora2 - electric ray (Discopyge... 162 1e-38 EU069503_1(EU069503|pid:none) Gymnochlora stellata Rab1B mRNA, c... 162 1e-38 EF457937_1(EF457937|pid:none) Lolium temulentum GTP-binding prot... 162 1e-38
>(P36412) RecName: Full=Ras-related protein Rab-11A; &U02925_1(U02925|pid:none) Length = 214
Score = 332 bits (850), Expect(2) = e-112 Identities = 170/170 (100%), Positives = 170/170 (100%) Frame = +3
Query: 162 MTSKGSQEEYDYLYKIVLIGDSGVGKSNLLSRFTRNEFSLETKSTIGVEFATRTIQTEGK 341 MTSKGSQEEYDYLYKIVLIGDSGVGKSNLLSRFTRNEFSLETKSTIGVEFATRTIQTEGK Sbjct: 1 MTSKGSQEEYDYLYKIVLIGDSGVGKSNLLSRFTRNEFSLETKSTIGVEFATRTIQTEGK 60
Query: 342 TIKAQVWDTAGQERYRAITSAYYRGAVGALLVYDIAKQATYKSVERWILELRENADRNIE 521 TIKAQVWDTAGQERYRAITSAYYRGAVGALLVYDIAKQATYKSVERWILELRENADRNIE Sbjct: 61 TIKAQVWDTAGQERYRAITSAYYRGAVGALLVYDIAKQATYKSVERWILELRENADRNIE 120
Query: 522 IMLVGNKSDLRHLREVSTDEAKEFSEKHKLTFIETSALDSSNVELAFQNI 671 IMLVGNKSDLRHLREVSTDEAKEFSEKHKLTFIETSALDSSNVELAFQNI Sbjct: 121 IMLVGNKSDLRHLREVSTDEAKEFSEKHKLTFIETSALDSSNVELAFQNI 170
Score = 96.7 bits (239), Expect(2) = e-112 Identities = 45/45 (100%), Positives = 45/45 (100%) Frame = +1
Query: 673 ILTQIYHIMSRPSHSTGPQTTIDSNTETIILPTTSEPPAAKSGCC 807 ILTQIYHIMSRPSHSTGPQTTIDSNTETIILPTTSEPPAAKSGCC Sbjct: 170 ILTQIYHIMSRPSHSTGPQTTIDSNTETIILPTTSEPPAAKSGCC 214
Lambda K H 0.318 0.134 0.401
Gapped Lambda K H 0.267 0.0410 0.140
Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 3236559 Number of Hits to DB: 1,145,962,783 Number of extensions: 19606680 Number of successful extensions: 79590 Number of sequences better than 10.0: 3937 Number of HSP's gapped: 76980 Number of HSP's successfully gapped: 4022 Length of query: 303 Length of database: 1,051,180,864 Length adjustment: 128 Effective length of query: 175 Effective length of database: 636,901,312 Effective search space: 111457729600 Effective search space used: 111457729600 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 32 (16.9 bits)
|
PSORT |
|
VS (DIR, S) |
1 |
VH (FL, L) |
0 |
VF (FL, S) |
0 |
AH (FL, L) |
1 |
AF (FL, S) |
0 |
SL (DIR, L) |
0 |
SS (DIR, S) |
2 |
SH (FL, L) |
0 |
SF (FL, S) |
0 |
CH (FL, L) |
0 |
CF (FL, S) |
0 |
FCL (DIR, L) |
0 |
FC (DIR, S) |
0 |
FC-IC (SUB) |
0 |