Contig-U13976-1
Contig ID Contig-U13976-1
Contig update 2002.12.18
Contig sequence
>Contig-U13976-1 (Contig-U13976-1Q) /CSM_Contig/Contig-U13976-1Q.Seq.d
ATACAAAAAAAAAAAAAAAAATCAAAGAAAACGTTAATATTTCATAAAAT
CAAATCAACAAAAACTAATCAAAAAAAATAAAAAAAAAAAAAANAAAAAA
AAATTTAAAAATAATGACATCATTTTTACTCTTCAATCCTGGAAGTTTGC
AGCAACAGCAACAACCACACTCTTTTTCAAAAGATTTTATCAACAATAAC
AATAATAATAATAATAATTGTCAATCATCATTTTCAACACCATTAGGAGG
TAGTAATGGTATAAATAATCCAAATGCAACAACCAACAACACCACCACAA
CAACAACTACCACAACAACAACAACCAATCCATTAAGTGGTAGCACTGGA
ATCAATAACTCAAATATTGAAGTAATTGATATTGATCAATGTTTAAAGCA
TTGTGGATGTCGTAACCCAAAGGAATTAATTCAATTGATTCGTTCTGATG
CAATTGAAAACGTTGAAATTTCATGGCCAGATGATATGGGTTTATGGTAC
ATGAATACAATCAAATCGCATGAGGTTAGTCTTCAAAACTTGGTTGAAGG
TGTAAGAGTAGCAGGTCAATTATTATTATTGGACCCAACATCTGCACGTT
TTGATCTCTCAAAGAAACAAAAGACCATTGTTGTCCGTTCAGTCAACATT
GATCGTTCATCATCAAGTCTCTCATCAGAGGATGATGATTGTTGTTATGA
AACAGAAGAGGATGACAATGGTGAAGATGGTGAGGTCGTTAGATCACCAC
AATCCAAATTTTCACTTCTATTGGATGAGAGTGAAAAAATTCAGAAAAAG
CTTCTCACTCAAGAAATCATCAAGATCAGCATTTAAAAAGAATAAAAAGG
ATTATCATCATGGCTCTAGCGCAGGAGGAGGAGGAAGTAGTGGTGGAGTT
GTGGTATTACATTATGATAATAATGGAAATCAATTACACTATAGCAATTC
AATGACTGACAACAATAGTCGCCATCACCAACATGGTGGAGTTGGTGATG
GTTATCCTCATTCTCCACCTGCAGCAGGAGGAAAATCATTGGGAAAGAGA
GGTTATCAACAATGGAGCAATAGTAACAACAATAACAACAACAACAACAA
CAATAATAACAACAACAATGGTGCTAGTGGTTTTGTTCAAAGTGATGAAG
ATTTGGATGCATCGTGGTTGGAAGAGATAAAGAGAAATCGTGCAGAGGTT
GTACCAGATCTCAGTAGTCCGGCACTTTTCTCTATGGATAAACGCTCTCC
AAGTCCGACTTTGGGTAGTTCGTGTGGTTCATCAAGTCCTGGTTTAAATA
ATTCCGGTAATGAAATGAATAACAGTCAAGACTCTCCTCTTGGGGTAAGT
GGTGGCAATGGCAACAGTCTCAATATTAGCTCGGGCATTCAATGTCCGCC
TGGTGCCAATATCGATTCTGCTGAAAAAGCAATTTTAGAAGGTCAAATCC
ATTTGCCACCTTTATTAAGACCAAGACAATATCACGCCTGCAAAACCTCC
AAAGAAAACAGGCCAACTAAAAGAAGAAAGAACCATACCTCTTTATTCTG
TAGACATTGTGGTACCACTGATACACCAGAATGGAGAAGAGGTCCCGATG
GTCGTAAATCACTTTGCAATGCATGTGGTCTCCATTACTCAAAATTGGTT
AAAAGAGTAAATATGGCAGTACCTGAATTATCTAGAACCTTTGAATTATC
TGAAATTTTAAACCCTTCCGATTAAAAACAAAACTGAAATATTATTAAAA
CAACTATTTTTTTTTTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATAT
TATTATTATTATTTTCATTCAACCATTTATTTCAAATTTCATTCAATTTC
AACCAATAATTTTATTTCCAAAATTTTTGTTTC

Gap no gap
Contig length 1883
Chromosome number (1..6, M) -
Chromosome length -
Start point -
End point -
Strand (PLUS/MINUS) -
Number of clones 14
Number of EST 17
Link to clone list U13976
List of clone(s)

est1=SLG196F,1,611
est2=SSI463F,121,1386
est3=CFA627F,241,764
est4=SFD666Z,740,1448
est5=AFO337Z,773,1362
est6=VSI896F,1053,1441
est7=CFF433Z,1079,1582
est8=SLG196Z,1171,1768
est9=CHD586Z,1181,1649
est10=SFB445Z,1215,1611
est11=AFL216Z,1216,1551
est12=VSH291Z,1322,1682
est13=VFJ661Z,1338,1548
est14=VSK105F,1413,1777
est15=VSG356F,1442,1778
est16=SSI463Z,1564,1883
est17=VSG356Z,1767,1871
Translated Amino Acid sequence
iqkkkkkskktlifhkikstktnqkk*kkkkxkki*k**hhfyssilevcsnsnnhtlfq
kilstitiiiiiivnhhfqhh*evvmv*iiqmqqpttppqqqlpqqqqpih*vvalesit
qilk*lilinv*sivdvvtqrn*fn*fvlmqlktlkfhgqmiwvygt*iqsnrmrlvfkt
wlkv*e*QVNYYYWTQHLHVLISQRNKRPLLSVQSTLIVHHQVSHQRMMIVVMKQKRMTM
VKMVRSLDHHNPNFHFYWMRVKKFRKSFSLKKSSRSAFKKNKKDYHHGSSAGGGGSSGGV
VVLHYDNNGNQLHYSNSMTDNNSRHHQHGGVGDGYPHSPPAAGGKSLGKRGYQQWSNSNN
NNNNNNNNNNNNNGASGFVQSDEDLDASWLEEIKRNRAEVVPDLSSPALFSMDKRSPSPT
LGSSCGSSSPGLNNSGNEMNNSQDSPLGVSGGNGNSLNISSGIQCPPGANIDSAEKAILE
GQIHLPPLLRPRQYHACKTSKENRPTKRRKNHTSLFCRHCGTTDTPEWRRGPDGRKSLCN
ACGLHYSKLVKRVNMAVPELSRTFELSEILNPSD*kqn*niikttifffkkkkkkkkkky
yyyyfhstiyfkfhsistnnfiskifv


Translated Amino Acid sequence (All Frames)
Frame A:
iqkkkkkskktlifhkikstktnqkk*kkkkxkki*k**hhfyssilevcsnsnnhtlfq
kilstitiiiiiivnhhfqhh*evvmv*iiqmqqpttppqqqlpqqqqpih*vvalesit
qilk*lilinv*sivdvvtqrn*fn*fvlmqlktlkfhgqmiwvygt*iqsnrmrlvfkt
wlkv*e*QVNYYYWTQHLHVLISQRNKRPLLSVQSTLIVHHQVSHQRMMIVVMKQKRMTM
VKMVRSLDHHNPNFHFYWMRVKKFRKSFSLKKSSRSAFKKNKKDYHHGSSAGGGGSSGGV
VVLHYDNNGNQLHYSNSMTDNNSRHHQHGGVGDGYPHSPPAAGGKSLGKRGYQQWSNSNN
NNNNNNNNNNNNNGASGFVQSDEDLDASWLEEIKRNRAEVVPDLSSPALFSMDKRSPSPT
LGSSCGSSSPGLNNSGNEMNNSQDSPLGVSGGNGNSLNISSGIQCPPGANIDSAEKAILE
GQIHLPPLLRPRQYHACKTSKENRPTKRRKNHTSLFCRHCGTTDTPEWRRGPDGRKSLCN
ACGLHYSKLVKRVNMAVPELSRTFELSEILNPSD*kqn*niikttifffkkkkkkkkkky
yyyyfhstiyfkfhsistnnfiskifv


Frame B:
ykkkkknqrkr*yfiksnqqklikknkkkkxkkkfknndiiftlqswkfaatatttlffk
rfyqq*q*****lsiiifntirr**wyk*skcnnqqhhhnnnyhnnnnqsikw*hwnq*l
ky*sn*y*smfkalwms*pkginsidsf*cn*kr*nfmar*ygfmvheynqia*g*sskl
g*rckssrsiiiigpnictf*slketkdhccpfsqh*sfiikslirg**lll*nrrg*qw
*rw*gr*ittiqiftsig*e*knsekashsrnhqdqhlkrikriiimalaqeeeevvvel
wyyimiimeinytiaiq*lttivaitnmvelvmvililhlqqeenhwerevinngaivtt
ittttttiitttmvlvvlfkvmkiwmhrgwkr*reivqrlyqisvvrhfslwinalqvrl
wvvrvvhqvlv*iipvmk*itvktlllg*vvamatvsilarafnvrlvpisillkkqf*k
vksichly*dqdnitpakppkktgqlkeertiplysvdivvplihqngeevpmvvnhfam
hvvsitqnwlke*iwqylnyleplnylkf*tlpiknkteillkqlffflkkkkkkkkkni
iiiifiqpfisnfiqfqpiilfpkflf


Frame C:
tkkkkkikenvnis*nqinkn*skkikkkkxkknlkimtsfllfnpgslqqqqqphsfsk
dfinnnnnnnnncqssfstplggsnginnpnattnnttttttttttttnplsgstginns
nievididqclkhcgcrnpkeliqlirsdaienveiswpddmglwymntikshevslqnl
vegvrvagqlllldptsarfdlskkqktivvrsvnidrsssslssedddccyeteeddng
edgevvrspqskfsllldesekiqkklltqeiikisi*ke*kglsswl*rrrrrk*wwsc
gitl***wksitl*qfnd*qq*spsptwwsw*wlssfstcsrrkiigkerlstmeq**qq
*qqqqqq**qqqwc*wfcsk**rfgcivvgrdkekscrgctrsq*sgtflyg*tlsksdf
g*fvwfikswfk*fr**ne*qsrlsswgkwwqwqqsqy*lghsmsawcqyrfc*ksnfrr
snpfatfiktktisrlqnlqrkqan*kkkepylfil*tlwyh*ytrmekrsrws*itlqc
mwspllkig*kskygst*ii*nl*ii*nfkpfrlktklkyy*nnyfff*kkkkkkkkkil
lllfsfnhlfqisfnfnq*fyfqnfcf


own update 2004. 6.10
Homology vs CSM-cDNA
Query= Contig-U13976-1 (Contig-U13976-1Q)
/CSM_Contig/Contig-U13976-1Q.Seq.d
(1883 letters)

Database: CSM
6905 sequences; 5,674,871 total letters


Score E
Sequences producing significant alignments: (bits) Value

Contig-U13976-1 (Contig-U13976-1Q) /CSM_Contig/Conti... 1479 0.0
Contig-U14885-1 (Contig-U14885-1Q) /CSM_Contig/Conti... 38 0.034
Contig-U11687-1 (Contig-U11687-1Q) /CSM_Contig/Conti... 36 0.13
Contig-U08277-1 (Contig-U08277-1Q) /CSM_Contig/Conti... 36 0.13
Contig-U14787-1 (Contig-U14787-1Q) /CSM_Contig/Conti... 34 0.53
Contig-U12743-1 (Contig-U12743-1Q) /CSM_Contig/Conti... 34 0.53
Contig-U12489-1 (Contig-U12489-1Q) /CSM_Contig/Conti... 34 0.53
Contig-U11717-1 (Contig-U11717-1Q) /CSM_Contig/Conti... 34 0.53
Contig-U13195-1 (Contig-U13195-1Q) /CSM_Contig/Conti... 32 2.1

>Contig-U13976-1 (Contig-U13976-1Q) /CSM_Contig/Contig-U13976-1Q.Seq.d
Length = 1883

Score = 1479 bits (746), Expect = 0.0
Identities = 746/746 (100%)
Strand = Plus / Plus


Query: 329 tccattaagtggtagcactggaatcaataactcaaatattgaagtaattgatattgatca 388
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 329 tccattaagtggtagcactggaatcaataactcaaatattgaagtaattgatattgatca 388


Query: 389 atgtttaaagcattgtggatgtcgtaacccaaaggaattaattcaattgattcgttctga 448
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 389 atgtttaaagcattgtggatgtcgtaacccaaaggaattaattcaattgattcgttctga 448


Query: 449 tgcaattgaaaacgttgaaatttcatggccagatgatatgggtttatggtacatgaatac 508
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 449 tgcaattgaaaacgttgaaatttcatggccagatgatatgggtttatggtacatgaatac 508


Query: 509 aatcaaatcgcatgaggttagtcttcaaaacttggttgaaggtgtaagagtagcaggtca 568
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 509 aatcaaatcgcatgaggttagtcttcaaaacttggttgaaggtgtaagagtagcaggtca 568


Query: 569 attattattattggacccaacatctgcacgttttgatctctcaaagaaacaaaagaccat 628
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 569 attattattattggacccaacatctgcacgttttgatctctcaaagaaacaaaagaccat 628


Query: 629 tgttgtccgttcagtcaacattgatcgttcatcatcaagtctctcatcagaggatgatga 688
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 629 tgttgtccgttcagtcaacattgatcgttcatcatcaagtctctcatcagaggatgatga 688


Query: 689 ttgttgttatgaaacagaagaggatgacaatggtgaagatggtgaggtcgttagatcacc 748
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 689 ttgttgttatgaaacagaagaggatgacaatggtgaagatggtgaggtcgttagatcacc 748


Query: 749 acaatccaaattttcacttctattggatgagagtgaaaaaattcagaaaaagcttctcac 808
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 749 acaatccaaattttcacttctattggatgagagtgaaaaaattcagaaaaagcttctcac 808


Query: 809 tcaagaaatcatcaagatcagcatttaaaaagaataaaaaggattatcatcatggctcta 868
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 809 tcaagaaatcatcaagatcagcatttaaaaagaataaaaaggattatcatcatggctcta 868


Query: 869 gcgcaggaggaggaggaagtagtggtggagttgtggtattacattatgataataatggaa 928
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 869 gcgcaggaggaggaggaagtagtggtggagttgtggtattacattatgataataatggaa 928


Query: 929 atcaattacactatagcaattcaatgactgacaacaatagtcgccatcaccaacatggtg 988
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 929 atcaattacactatagcaattcaatgactgacaacaatagtcgccatcaccaacatggtg 988


Query: 989 gagttggtgatggttatcctcattctccacctgcagcaggaggaaaatcattgggaaaga 1048
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 989 gagttggtgatggttatcctcattctccacctgcagcaggaggaaaatcattgggaaaga 1048


Query: 1049 gaggttatcaacaatggagcaatagt 1074
||||||||||||||||||||||||||
Sbjct: 1049 gaggttatcaacaatggagcaatagt 1074


Score = 1287 bits (649), Expect = 0.0
Identities = 649/649 (100%)
Strand = Plus / Plus


Query: 1119 tggtgctagtggttttgttcaaagtgatgaagatttggatgcatcgtggttggaagagat 1178
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1119 tggtgctagtggttttgttcaaagtgatgaagatttggatgcatcgtggttggaagagat 1178


Query: 1179 aaagagaaatcgtgcagaggttgtaccagatctcagtagtccggcacttttctctatgga 1238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1179 aaagagaaatcgtgcagaggttgtaccagatctcagtagtccggcacttttctctatgga 1238


Query: 1239 taaacgctctccaagtccgactttgggtagttcgtgtggttcatcaagtcctggtttaaa 1298
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1239 taaacgctctccaagtccgactttgggtagttcgtgtggttcatcaagtcctggtttaaa 1298


Query: 1299 taattccggtaatgaaatgaataacagtcaagactctcctcttggggtaagtggtggcaa 1358
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1299 taattccggtaatgaaatgaataacagtcaagactctcctcttggggtaagtggtggcaa 1358


Query: 1359 tggcaacagtctcaatattagctcgggcattcaatgtccgcctggtgccaatatcgattc 1418
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1359 tggcaacagtctcaatattagctcgggcattcaatgtccgcctggtgccaatatcgattc 1418


Query: 1419 tgctgaaaaagcaattttagaaggtcaaatccatttgccacctttattaagaccaagaca 1478
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1419 tgctgaaaaagcaattttagaaggtcaaatccatttgccacctttattaagaccaagaca 1478


Query: 1479 atatcacgcctgcaaaacctccaaagaaaacaggccaactaaaagaagaaagaaccatac 1538
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1479 atatcacgcctgcaaaacctccaaagaaaacaggccaactaaaagaagaaagaaccatac 1538


Query: 1539 ctctttattctgtagacattgtggtaccactgatacaccagaatggagaagaggtcccga 1598
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1539 ctctttattctgtagacattgtggtaccactgatacaccagaatggagaagaggtcccga 1598


Query: 1599 tggtcgtaaatcactttgcaatgcatgtggtctccattactcaaaattggttaaaagagt 1658
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1599 tggtcgtaaatcactttgcaatgcatgtggtctccattactcaaaattggttaaaagagt 1658


Query: 1659 aaatatggcagtacctgaattatctagaacctttgaattatctgaaattttaaacccttc 1718
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1659 aaatatggcagtacctgaattatctagaacctttgaattatctgaaattttaaacccttc 1718


Query: 1719 cgattaaaaacaaaactgaaatattattaaaacaactattttttttttt 1767
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1719 cgattaaaaacaaaactgaaatattattaaaacaactattttttttttt 1767


Score = 180 bits (91), Expect = 4e-45
Identities = 91/91 (100%)
Strand = Plus / Plus


Query: 104 tttaaaaataatgacatcatttttactcttcaatcctggaagtttgcagcaacagcaaca 163
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 104 tttaaaaataatgacatcatttttactcttcaatcctggaagtttgcagcaacagcaaca 163


Query: 164 accacactctttttcaaaagattttatcaac 194
|||||||||||||||||||||||||||||||
Sbjct: 164 accacactctttttcaaaagattttatcaac 194


Score = 115 bits (58), Expect = 2e-25
Identities = 58/58 (100%)
Strand = Plus / Plus


Query: 219 tgtcaatcatcattttcaacaccattaggaggtagtaatggtataaataatccaaatg 276
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 219 tgtcaatcatcattttcaacaccattaggaggtagtaatggtataaataatccaaatg 276


Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Plus


Query: 22 tcaaagaaaacgttaatatttca 44
|||||||||||||||||||||||
Sbjct: 22 tcaaagaaaacgttaatatttca 44


>Contig-U14885-1 (Contig-U14885-1Q) /CSM_Contig/Contig-U14885-1Q.Seq.d
Length = 277

Score = 38.2 bits (19), Expect = 0.034
Identities = 19/19 (100%)
Strand = Plus / Plus


Query: 150 cagcaacagcaacaaccac 168
|||||||||||||||||||
Sbjct: 166 cagcaacagcaacaaccac 184


>Contig-U11687-1 (Contig-U11687-1Q) /CSM_Contig/Contig-U11687-1Q.Seq.d
Length = 1508

Score = 36.2 bits (18), Expect = 0.13
Identities = 18/18 (100%)
Strand = Plus / Minus


Query: 1740 tattattaaaacaactat 1757
||||||||||||||||||
Sbjct: 483 tattattaaaacaactat 466


Database: CSM
Posted date: Jun 9, 2004 7:35 PM
Number of letters in database: 5,674,871
Number of sequences in database: 6905

Lambda K H
1.37 0.711 1.31

Gapped
Lambda K H
1.37 0.711 1.31


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 97,049
Number of Sequences: 6905
Number of extensions: 97049
Number of successful extensions: 4490
Number of sequences better than 10.0: 287
length of query: 1883
length of database: 5,674,871
effective HSP length: 16
effective length of query: 1867
effective length of database: 5,564,391
effective search space: 10388717997
effective search space used: 10388717997
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 15 (30.2 bits)
dna update 2008.12.16
Homology vs DNA
Query= Contig-U13976-1 (Contig-U13976-1Q) /CSM_Contig/Contig-U13976-1Q.Seq.d
(1883 letters)

Database: ddbj_A
92,845,959 sequences; 95,242,211,685 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value N

(AU039693) Dictyostelium discoideum slug cDNA, clone SLG196. 1152 0.0 1
(BJ400025) Dictyostelium discoideum cDNA clone:dds8c18, 3' e... 543 0.0 3
(BJ345880) Dictyostelium discoideum cDNA clone:dda29j09, 3' ... 563 0.0 2
(BJ372096) Dictyostelium discoideum cDNA clone:ddc11b10, 3' ... 920 0.0 1
(BJ359745) Dictyostelium discoideum cDNA clone:ddc2e08, 5' e... 858 0.0 2
(BJ376775) Dictyostelium discoideum cDNA clone:ddc29k21, 3' ... 886 0.0 1
(AU061813) Dictyostelium discoideum slug cDNA, clone SLG196. 561 0.0 3
(AU270655) Dictyostelium discoideum vegetative cDNA clone:VS... 682 0.0 1
(AU269403) Dictyostelium discoideum vegetative cDNA clone:VS... 640 e-179 1
(AU267212) Dictyostelium discoideum vegetative cDNA clone:VS... 624 e-174 1
(AU266358) Dictyostelium discoideum vegetative cDNA clone:VS... 617 e-172 1
(BJ398961) Dictyostelium discoideum cDNA clone:dds3j12, 3' e... 551 e-166 2
(BJ345280) Dictyostelium discoideum cDNA clone:dda23o04, 3' ... 541 e-149 1
(C90248) Dictyostelium discoideum slug cDNA, clone SSI463. 307 8e-79 1
(AU073825) Dictyostelium discoideum slug cDNA, clone SSI463. 147 3e-67 3
(BJ433044) Dictyostelium discoideum cDNA clone:ddv20i16, 3' ... 190 1e-43 1
(EH401416) HA_MX1_04g09_SP6 Lobster Multiple Tissues, Normal... 52 0.078 1
(BX004971) Zebrafish DNA sequence from clone DKEY-121A9 in l... 42 0.13 6
(BX511183) Zebrafish DNA sequence from clone CH211-51F18 in ... 42 0.19 5
(BX511250) Zebrafish DNA sequence from clone CH211-57K11 in ... 50 0.31 1
(AL929095) Mouse DNA sequence from clone RP24-576M16 on chro... 50 0.31 1
(BB063576) Mus musculus egg female in vitro fertilized eggs ... 50 0.31 1
(FH985138) CHO_OF6839xm21f1.ab1 CHO_OF6 Nicotiana tabacum ge... 34 0.88 2
(AF252827) Homo sapiens chromosome 8 clone RP11-166E20 map q... 48 1.2 1
(AC124210) Homo sapiens chromosome 8 clone RP11-755E24 map q... 48 1.2 1
(AC100871) Homo sapiens chromosome 8, clone RP11-959I15, com... 48 1.2 1
(AC225921) Oryza officinalis clone OO__Ba0035N24, *** SEQUEN... 48 1.2 1
(AC186735) Glycine max clone gmw2-67a6, WORKING DRAFT SEQUEN... 48 1.2 1
(AC167083) Oryctolagus cuniculus clone LB1-305L9, WORKING DR... 48 1.2 1
(AC018402) Homo sapiens clone RP11-16N14, WORKING DRAFT SEQU... 48 1.2 1
(AC012415) Homo sapiens chromosome 8 clone RP11-407A14 map 8... 48 1.2 1
(BH163422) ENTTP65TR Entamoeba histolytica Sheared DNA Entam... 48 1.2 1
(AZ688604) ENTFV23TR Entamoeba histolytica Sheared DNA Entam... 48 1.2 1
(AZ679710) ENTMM35TF Entamoeba histolytica Sheared DNA Entam... 48 1.2 1
(AZ673977) ENTHH59TR Entamoeba histolytica Sheared DNA Entam... 48 1.2 1
(AZ545652) ENTDX51TR Entamoeba histolytica Sheared DNA Entam... 48 1.2 1
(EJ876221) 1093018370946 Global-Ocean-Sampling_GS-30-02-01-1... 48 1.2 1
(EJ830916) 1093017580774 Global-Ocean-Sampling_GS-30-02-01-1... 48 1.2 1
(EI780024) CHORI518001O13TF BAC library from the breast cell... 48 1.2 1
(EI360985) GM_WBc0114G24.f GM_WBc Glycine max genomic clone ... 48 1.2 1
(ED644299) GM_WBa0057I18.r GM_WBa Glycine max genomic clone ... 48 1.2 1
(EB666679) 9W6III_JR_C08 pAPO Cenchrus ciliaris cDNA 5', mRN... 48 1.2 1
(EY319643) CAWX6992.rev CAWX Helobdella robusta Primary Earl... 38 1.7 2
(EY361089) CAWZ7530.rev CAWZ Helobdella robusta Primary Late... 38 1.7 2
(EY323053) CAWX8786.rev CAWX Helobdella robusta Primary Earl... 38 1.8 2
(EY327761) CAWY12841.rev CAWY Helobdella robusta Subtracted ... 38 1.8 2
(EY326469) CAWY11625.fwd CAWY Helobdella robusta Subtracted ... 38 1.8 2
(EY327762) CAWY12841.fwd CAWY Helobdella robusta Subtracted ... 38 2.0 2
(EY307409) CAWX20450.fwd CAWX Helobdella robusta Primary Ear... 38 2.0 2
(EY361090) CAWZ7530.fwd CAWZ Helobdella robusta Primary Late... 38 2.1 2
(EY328611) CAWY1716.fwd CAWY Helobdella robusta Subtracted E... 38 2.1 2
(EY319644) CAWX6992.fwd CAWX Helobdella robusta Primary Earl... 38 2.1 2
(AC170314) Mus musculus chromosome 8 clone RP23-4I3, WORKING... 34 2.4 2
(AC135357) Mus musculus chromosome 8 clone RP24-84L15, compl... 34 2.4 2
(CS623726) Sequence 277 from Patent WO2006071466. 40 3.1 2
(CR171463) Forward strand read from insert in 3'HPRT inserti... 34 3.2 2
(EB240745) PEG003-C-212308-501 Normalized Pedal-Pleural Gang... 34 3.3 2
(CR753869) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 42 4.4 8
(AY803440) HIV-1 isolate 03-9412NS from Uganda nef protein (... 46 4.8 1
(AC142450) Mus musculus BAC clone RP24-425G6 from 8, complet... 46 4.8 1
(AC099415) Mus musculus BAC clone RP23-122D8 from chromosome... 46 4.8 1
(AC198727) Pongo abelii BAC clone CH276-89H18 from chromosom... 46 4.8 1
(DL034404) Diagnosis of existing illnesses or that praedispo... 46 4.8 1
(DL034403) Diagnosis of existing illnesses or that praedispo... 46 4.8 1
(AX344675) Sequence 100 from Patent WO0200927. 46 4.8 1
(EF133541) Trichechus manatus latirostris clone Tma25 micros... 46 4.8 1
(AL929357) Plasmodium falciparum strain 3D7, chromosome 9; s... 46 4.8 1
(AC084381) Homo sapiens BAC clone RP11-20K20 from 7, complet... 46 4.8 1
(AC018475) Homo sapiens 12 BAC RP11-490G8 (Roswell Park Canc... 46 4.8 1
(AC151898) Mus musculus chromosome 8 clone RP24-130A21, WORK... 46 4.8 1
(AC204800) Tupaia belangeri clone CH275-530H15, WORKING DRAF... 46 4.8 1
(AC191193) Nomascus leucogenys leucogenys clone CH271-260B5,... 46 4.8 1
(AC172708) Aotus nancymaae clone CH258-358A2, WORKING DRAFT ... 46 4.8 1
(DX914540) gSpTor-55.gT3 Spironucleus Zap GSS Library Spiron... 46 4.8 1
(DU505432) 1098553715792 CHORI-243 Ovis aries genomic clone ... 46 4.8 1
(DU405664) 1098448380910 CHORI-243 Ovis aries genomic clone ... 46 4.8 1
(DU192294) 1098538196139 CHORI-243 Ovis aries genomic clone ... 46 4.8 1
(CN725667) 1T31 Oak subtraction cDNA library Quercus petraea... 46 4.8 1
(BP945575) Bruguiera gymnorhiza mRNA, clone: Bg04-08_J18, 5'... 46 4.8 1
(BP945312) Bruguiera gymnorhiza mRNA, clone: Bg04-07_J11, 5'... 46 4.8 1
(FF151792) G771P16RL18.T0 Culex pipiens quinquefasciatus Mix... 46 4.8 1
(FF151791) G771P16FL18.T0 Culex pipiens quinquefasciatus Mix... 46 4.8 1
(FF149874) G771P11RI16.T0 Culex pipiens quinquefasciatus Mix... 46 4.8 1
(FF149873) G771P11FI16.T0 Culex pipiens quinquefasciatus Mix... 46 4.8 1
(EV360854) G771P574RE16.T0 Culex pipiens quinquefasciatus Mi... 46 4.8 1
(EV360503) G771P574FE16.T0 Culex pipiens quinquefasciatus Mi... 46 4.8 1
(EV353768) G771P561RM5.T0 Culex pipiens quinquefasciatus Mix... 46 4.8 1
(EV353534) G771P561FM5.T0 Culex pipiens quinquefasciatus Mix... 46 4.8 1
(EV349153) G771P551FF3.T0 Culex pipiens quinquefasciatus Mix... 46 4.8 1
(EV348967) G771P551RF3.T0 Culex pipiens quinquefasciatus Mix... 46 4.8 1
(EV331392) G771P516FI13.T0 Culex pipiens quinquefasciatus Mi... 46 4.8 1
(EV331138) G771P516RI13.T0 Culex pipiens quinquefasciatus Mi... 46 4.8 1
(EV328937) G771P55FJ17.T0 Culex pipiens quinquefasciatus Mix... 46 4.8 1
(EV328513) G771P55RJ17.T0 Culex pipiens quinquefasciatus Mix... 46 4.8 1
(AW335586) S49B1 AGS-1 Pneumocystis carinii cDNA 3', mRNA se... 46 4.8 1
(CP000724) Alkaliphilus metalliredigens QYMF, complete genome. 46 4.8 1
(AE017308) Mycoplasma mobile 163K complete genome. 46 4.8 1
(CT624474) Danio rerio EST, clone ZF_mu_105c14 5'. 36 6.2 2
(BJ567963) Ipomoea nil cDNA clone:jm15o22, 3' end, single read. 40 6.7 2
(CF833023) UCRCS02_02N09_f Ruby Orange Ovary at Anthesis cDN... 38 7.2 2

>(AU039693) Dictyostelium discoideum slug cDNA, clone SLG196.
Length = 598

Score = 1152 bits (581), Expect = 0.0
Identities = 584/585 (99%)
Strand = Plus / Plus


Query: 1172 aagagataaagagaaatcgtgcagaggttgtaccagatctcagtagtccggcacttttct 1231
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aagagataaagagaaatcgtgcagaggttgtaccagatctcagtagtccggcacttttct 60


Query: 1232 ctatggataaacgctctccaagtccgactttgggtagttcgtgtggttcatcaagtcctg 1291
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ctatggataaacgctctccaagtccgactttgggtagttcgtgtggttcatcaagtcctg 120


Query: 1292 gtttaaataattccggtaatgaaatgaataacagtcaagactctcctcttggggtaagtg 1351
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gtttaaataattccggtaatgaaatgaataacagtcaagactctcctcttggggtaagtg 180


Query: 1352 gtggcaatggcaacagtctcaatattagctcgggcattcaatgtccgcctggtgccaata 1411
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gtggcaatggcaacagtctcaatattagctcgggcattcaatgtccgcctggtgccaata 240


Query: 1412 tcgattctgctgaaaaagcaattttagaaggtcaaatccatttgccacctttattaagac 1471
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tcgattctgctgaaaaagcaattttagaaggtcaaatccatttgccacctttattaagac 300


Query: 1472 caagacaatatcacgcctgcaaaacctccaaagaaaacaggccaactaaaagaagaaaga 1531
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 caagacaatatcacgcctgcaaaacctccaaagaaaacaggccaactaaaagaagaaaga 360


Query: 1532 accatacctctttattctgtagacattgtggtaccactgatacaccagaatggagaagag 1591
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 accatacctctttattctgtagacattgtggtaccactgatacaccagaatggagaagag 420


Query: 1592 gtcccgatggtcgtaaatcactttgcaatgcatgtggtctccattactcaaaattggtta 1651
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 gtcccgatggtcgtaaatcactttgcaatgcatgtggtctccattactcaaaattggtta 480


Query: 1652 aaagagtaaatatggcagtacctgaattatctagaacctttgaattatctgaaattttaa 1711
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 aaagagaaaatatggcagtacctgaattatctagaacctttgaattatctgaaattttaa 540


Query: 1712 acccttccgattaaaaacaaaactgaaatattattaaaacaacta 1756
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 acccttccgattaaaaacaaaactgaaatattattaaaacaacta 585

Lambda K H
1.37 0.711 1.31

Matrix: blastn matrix:1 -3
Number of Sequences: 92845959
Number of Hits to DB: 1,804,418,308
Number of extensions: 117448279
Number of successful extensions: 10977318
Number of sequences better than 10.0: 102
Length of query: 1883
Length of database: 95,242,211,685
Length adjustment: 24
Effective length of query: 1859
Effective length of database: 97,308,875,965
Effective search space: 180897200418935
Effective search space used: 180897200418935
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)

protein update 2009. 7. 9
Homology vs Protein
Query= Contig-U13976-1 (Contig-U13976-1Q) /CSM_Contig/Contig-U13976-1Q.Seq.d
(1883 letters)

Database: nrp_B
3,236,559 sequences; 1,051,180,864 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value

(Q54TM6) RecName: Full=GATA zinc finger domain-containing protei... 441 0.0
(Q54KX0) RecName: Full=GATA zinc finger domain-containing protei... 86 5e-15
(Q75JZ0) RecName: Full=GATA zinc finger domain-containing protei... 76 5e-12
(Q54HA4) RecName: Full=GATA zinc finger domain-containing protei... 72 7e-11
CR382137_291(CR382137|pid:none) Debaryomyces hansenii strain CBS... 71 2e-10
CR380958_292(CR380958|pid:none) Candida glabrata strain CBS138 c... 70 2e-10
CR382138_1228(CR382138|pid:none) Debaryomyces hansenii chromosom... 70 3e-10
(Q75JZ1) RecName: Full=GATA zinc finger domain-containing protei... 70 3e-10
AM920436_367(AM920436|pid:none) Penicillium chrysogenum Wisconsi... 70 3e-10
(Q54TE3) RecName: Full=GATA zinc finger domain-containing protei... 68 1e-09
(B0G188) RecName: Full=GATA zinc finger domain-containing protei... 68 1e-09
CU928180_268(CU928180|pid:none) Kluyveromyces thermotolerans str... 67 2e-09
FM992688_484(FM992688|pid:none) Candida dubliniensis CD36 chromo... 67 2e-09
FM992689_206(FM992689|pid:none) Candida dubliniensis CD36 chromo... 66 5e-09
AF082072_2(AF082072|pid:none) Emericella nidulans ABC transporte... 65 7e-09
CR382132_225(CR382132|pid:none) Yarrowia lipolytica strain CLIB1... 65 1e-08
AM920428_1535(AM920428|pid:none) Penicillium chrysogenum Wiscons... 65 1e-08
AL670009_23(AL670009|pid:none) Neurospora crassa DNA linkage gro... 64 1e-08
U70043_1(U70043|pid:none) Aspergillus nidulans NsdD (nsdD) gene,... 64 1e-08
AY628432_1(AY628432|pid:none) Trichoderma atroviride blue light ... 64 1e-08
AP007161_640(AP007161|pid:none) Aspergillus oryzae RIB40 genomic... 64 1e-08
CR382126_738(CR382126|pid:none) Kluyveromyces lactis strain NRRL... 63 3e-08
AE016817_649(AE016817|pid:none) Ashbya gossypii (= Eremothecium ... 63 4e-08
(Q54NM5) RecName: Full=GATA zinc finger domain-containing protei... 63 4e-08
(Q55C49) RecName: Full=GATA zinc finger domain-containing protei... 62 6e-08
(Q9SKN6) RecName: Full=Putative GATA transcription factor 7; &A... 62 9e-08
AC034258_5(AC034258|pid:none) Oryza sativa chromosome 10 BAC OSJ... 61 2e-07
DQ229145_2(DQ229145|pid:none) Phycomyces blakesleeanus MAP kinas... 61 2e-07
AC096781_12(AC096781|pid:none) Oryza sativa chromosome 10 BAC OS... 61 2e-07
AP008218_348(AP008218|pid:none) Oryza sativa (japonica cultivar-... 61 2e-07
EU972972_1(EU972972|pid:none) Zea mays clone 390973 unknown mRNA. 60 2e-07
FM178799_1(FM178799|pid:none) Phycomyces blakesleeanus madB gene... 60 2e-07
(P78714) RecName: Full=White collar 2 protein; Short=WC... 60 3e-07
AB446463_1(AB446463|pid:none) Lentinula edodes phrB mRNA for whi... 60 4e-07
AY823264_1(AY823264|pid:none) Hypocrea jecorina white collar 1 (... 59 5e-07
CP000587_339(CP000587|pid:none) Ostreococcus lucimarinus CCE9901... 59 5e-07
AM778551_1(AM778551|pid:none) Fusarium fujikuroi wcoA gene for w... 59 5e-07
AM040841_1(AM040841|pid:none) Mucor circinelloides wc-1a gene fo... 59 5e-07
BT061503_1(BT061503|pid:none) Zea mays full-length cDNA clone ZM... 59 5e-07
AC152422_5(AC152422|pid:none) Medicago truncatula clone mth2-48d... 59 5e-07
(Q55GK0) RecName: Full=GATA zinc finger domain-containing protei... 59 6e-07
BT068787_1(BT068787|pid:none) Zea mays full-length cDNA clone ZM... 59 8e-07
BT033727_1(BT033727|pid:none) Zea mays full-length cDNA clone ZM... 59 8e-07
AM920435_838(AM920435|pid:none) Penicillium chrysogenum Wisconsi... 58 1e-06
AY628431_1(AY628431|pid:none) Trichoderma atroviride blue light ... 58 1e-06
S69206(S69206)regulator protein white collar 1 - Neurospora crassa 58 1e-06
(Q01371) RecName: Full=White collar 1 protein; Short=WC... 58 1e-06
AE017343_639(AE017343|pid:none) Cryptococcus neoformans var. neo... 58 1e-06
AM040843_1(AM040843|pid:none) Mucor circinelloides wc-1c gene fo... 58 1e-06
AF515628_1(AF515628|pid:none) Emericella nidulans GATA-factor (l... 57 2e-06
AE017345_130(AE017345|pid:none) Cryptococcus neoformans var. neo... 57 2e-06
AB273633_1(AB273633|pid:none) Bipolaris oryzae BLR1 gene for blu... 57 3e-06
AC128644_13(AC128644|pid:none) Oryza sativa (japonica cultivar-g... 57 3e-06
CR954207_324(CR954207|pid:none) Ostreococcus tauri strain OTTH05... 56 4e-06
BX088700_80(BX088700|pid:none) DNA centromeric region sequence f... 56 5e-06
T05288(T05288;T52105)GATA-binding transcription factor homolog 3... 56 5e-06
AY099790_1(AY099790|pid:none) Arabidopsis thaliana GATA transcri... 56 5e-06
AC098571_17(AC098571|pid:none) Oryza sativa (japonica cultivar-g... 55 7e-06
AP007150_250(AP007150|pid:none) Aspergillus oryzae RIB40 genomic... 55 7e-06
EU966045_1(EU966045|pid:none) Zea mays clone 291148 unknown mRNA. 55 7e-06
AP007167_43(AP007167|pid:none) Aspergillus oryzae RIB40 genomic ... 55 7e-06
(Q8LC59) RecName: Full=GATA transcription factor 22; &AB493761_... 55 9e-06
AC146329_26(AC146329|pid:none) Medicago truncatula clone mth2-5i... 55 9e-06
AP003284_18(AP003284|pid:none) Oryza sativa Japonica Group genom... 55 9e-06
(Q9M1U2) RecName: Full=GATA transcription factor 8; &AL138649_1... 55 1e-05
CR855197_1(CR855197|pid:none) Oryza sativa genomic DNA, chromoso... 55 1e-05
EU969352_1(EU969352|pid:none) Zea mays clone 329022 GATA zinc fi... 55 1e-05
(Q6QPM2) RecName: Full=GATA transcription factor 21; &AB493721_... 55 1e-05
AY530746_1(AY530746|pid:none) Arabidopsis thaliana At4g36620 gen... 55 1e-05
AP008210_1450(AP008210|pid:none) Oryza sativa (japonica cultivar... 55 1e-05
AC147428_8(AC147428|pid:none) Medicago truncatula clone mth2-34i... 54 2e-05
EU967850_1(EU967850|pid:none) Zea mays clone 306547 GATA transcr... 54 2e-05
AY086746_1(AY086746|pid:none) Arabidopsis thaliana clone 27213 m... 54 2e-05
EU963121_1(EU963121|pid:none) Zea mays clone 257954 unknown mRNA. 54 3e-05
AK227493_1(AK227493|pid:none) Arabidopsis thaliana mRNA for GATA... 54 3e-05
BT060950_1(BT060950|pid:none) Zea mays full-length cDNA clone ZM... 54 3e-05
AL606587_7(AL606587|pid:none) Oryza sativa genomic DNA, chromoso... 54 3e-05
(Q8LAU9) RecName: Full=GATA transcription factor 1; Sho... 54 3e-05
AC146720_8(AC146720|pid:none) Medicago truncatula clone mth2-17n... 53 3e-05
AP003376_20(AP003376|pid:none) Oryza sativa Japonica Group genom... 53 3e-05
EU958035_1(EU958035|pid:none) Zea mays clone 1667273 unknown mRNA. 53 4e-05
AB107690_1(AB107690|pid:none) Nicotiana tabacum AGP2 mRNA for AG... 53 4e-05
BT051382_1(BT051382|pid:none) Medicago truncatula clone MTYF1_F2... 53 4e-05
AE017342_38(AE017342|pid:none) Cryptococcus neoformans var. neof... 53 4e-05
CR382126_422(CR382126|pid:none) Kluyveromyces lactis strain NRRL... 53 4e-05
BT054607_1(BT054607|pid:none) Zea mays full-length cDNA clone ZM... 53 4e-05
(O49743) RecName: Full=GATA transcription factor 4; Sho... 52 6e-05
(O82632) RecName: Full=GATA transcription factor 11; Sh... 52 6e-05
CR382131_236(CR382131|pid:none) Yarrowia lipolytica strain CLIB1... 52 6e-05
AB107693_1(AB107693|pid:none) Nicotiana tabacum AGP5 mRNA for AG... 52 8e-05
CP000582_136(CP000582|pid:none) Ostreococcus lucimarinus CCE9901... 52 8e-05
CP001325_322(CP001325|pid:none) Micromonas sp. RCC299 chromosome... 52 8e-05
AL590442_26(AL590442|pid:none) chromosome II of strain GB-M1 of ... 52 8e-05
CP000583_109(CP000583|pid:none) Ostreococcus lucimarinus CCE9901... 52 1e-04
X73111_1(X73111|pid:none) Nicotiana tabacum mRNA for GATA-1 zinc... 52 1e-04
AK241643_1(AK241643|pid:none) Oryza sativa Japonica Group cDNA, ... 52 1e-04
AF007270_14(AF007270|pid:none) Arabidopsis thaliana BAC F2P16, c... 52 1e-04
AC116977_1(AC116977|pid:none) Dictyostelium discoideum chromosom... 51 1e-04
(Q9SV30) RecName: Full=GATA transcription factor 10; Sh... 51 1e-04
EU962233_1(EU962233|pid:none) Zea mays clone 241131 GATA zinc fi... 51 1e-04
AC148757_3(AC148757|pid:none) Medicago truncatula clone mth2-57e... 51 1e-04
(Q550D5) RecName: Full=Transcription factor stalky; AltName: Ful... 51 1e-04
AB107691_1(AB107691|pid:none) Nicotiana tabacum AGP3 mRNA for AG... 51 1e-04
BT065232_1(BT065232|pid:none) Zea mays full-length cDNA clone ZM... 51 1e-04
AK118169_1(AK118169|pid:none) Arabidopsis thaliana At3g21175 mRN... 51 1e-04
AY042817_1(AY042817|pid:none) Arabidopsis thaliana Unknown prote... 51 1e-04
EF148510_1(EF148510|pid:none) Populus trichocarpa x Populus delt... 51 1e-04
(O49741) RecName: Full=GATA transcription factor 2; Sho... 51 2e-04
CP001323_604(CP001323|pid:none) Micromonas sp. RCC299 chromosome... 51 2e-04
(O65515) RecName: Full=GATA transcription factor 12; &AL022141_... 51 2e-04
(O94720) RecName: Full=GATA zinc finger domain-containing protei... 51 2e-04
EU967444_1(EU967444|pid:none) Zea mays clone 303140 GATA zinc fi... 50 2e-04
AY065074_1(AY065074|pid:none) Arabidopsis thaliana unknown prote... 50 3e-04
AC069300_10(AC069300|pid:none) Oryza sativa chromosome 10 BAC OS... 50 3e-04
BT068804_1(BT068804|pid:none) Zea mays full-length cDNA clone ZM... 50 3e-04
(Q5HZ36) RecName: Full=GATA transcription factor 24; &AB020747_... 50 3e-04
BT070054_1(BT070054|pid:none) Zea mays full-length cDNA clone ZM... 50 3e-04
AP004729_5(AP004729|pid:none) Oryza sativa Japonica Group genomi... 50 4e-04
M80547_1(M80547|pid:none) Ustilago maydis URBS1 protein (urbS1) ... 50 4e-04
EU955555_1(EU955555|pid:none) Zea mays clone 1536888 GATA transc... 50 4e-04
BT033679_1(BT033679|pid:none) Zea mays full-length cDNA clone ZM... 50 4e-04
L29051_1(L29051|pid:none) Schizosaccharomyces pombe GATA-binding... 50 4e-04
CR382137_78(CR382137|pid:none) Debaryomyces hansenii strain CBS7... 49 5e-04
AF520973_1(AF520973|pid:none) Candida albicans transcription fac... 49 5e-04
AP003329_17(AP003329|pid:none) Oryza sativa Japonica Group genom... 49 6e-04
BT084131_1(BT084131|pid:none) Zea mays full-length cDNA clone ZM... 49 6e-04
EU969898_1(EU969898|pid:none) Zea mays clone 337006 hypothetical... 49 6e-04
BT041227_1(BT041227|pid:none) Zea mays full-length cDNA clone ZM... 49 6e-04
BT040389_1(BT040389|pid:none) Zea mays full-length cDNA clone ZM... 49 6e-04
EU972328_1(EU972328|pid:none) Zea mays clone 379713 GATA transcr... 49 6e-04
AK070729_1(AK070729|pid:none) Oryza sativa Japonica Group cDNA c... 49 6e-04
EU964147_1(EU964147|pid:none) Zea mays clone 276193 hypothetical... 49 6e-04
EU966996_1(EU966996|pid:none) Zea mays clone 298733 unknown mRNA. 49 6e-04
AY084525_1(AY084525|pid:none) Arabidopsis thaliana clone 110655 ... 49 8e-04
BT070097_1(BT070097|pid:none) Zea mays full-length cDNA clone ZM... 49 8e-04
EU967675_1(EU967675|pid:none) Zea mays clone 305252 unknown mRNA. 49 8e-04
BT067067_1(BT067067|pid:none) Zea mays full-length cDNA clone ZM... 49 8e-04
BT055755_1(BT055755|pid:none) Zea mays full-length cDNA clone ZM... 49 8e-04
(Q8LG10) RecName: Full=GATA transcription factor 16; &AY063926_... 49 8e-04
AM470429_1(AM470429|pid:none) Vitis vinifera contig VV78X191569.... 49 8e-04
AY045906_1(AY045906|pid:none) Arabidopsis thaliana putative flow... 48 0.001
(Q10134) RecName: Full=Iron-sensing transcription factor 1; AltN... 48 0.001
(Q8H1G0) RecName: Full=GATA transcription factor 25; AltName: Fu... 48 0.001
CU638744_471(CU638744|pid:none) Podospora anserina genomic DNA c... 48 0.001
CU633899_522(CU633899|pid:none) Podospora anserina genomic DNA c... 48 0.001
CU633872_202(CU633872|pid:none) Podospora anserina genomic DNA c... 48 0.001
DQ536171_1(DQ536171|pid:none) Populus trichocarpa clone 19012879... 48 0.001
CP000587_66(CP000587|pid:none) Ostreococcus lucimarinus CCE9901 ... 48 0.001
CR382122_108(CR382122|pid:none) Kluyveromyces lactis strain NRRL... 48 0.001
CP000588_205(CP000588|pid:none) Ostreococcus lucimarinus CCE9901... 48 0.001
CP001327_648(CP001327|pid:none) Micromonas sp. RCC299 chromosome... 48 0.001
(Q92259) RecName: Full=GATA factor SREP; &AM920436_564(AM920436... 47 0.002
AE017347_189(AE017347|pid:none) Cryptococcus neoformans var. neo... 47 0.002
EU959930_1(EU959930|pid:none) Zea mays clone 220709 GATA transcr... 47 0.002
AE017341_190(AE017341|pid:none) Cryptococcus neoformans var. neo... 47 0.002
AC183496_28(AC183496|pid:none) Brassica oleracea, *** SEQUENCING... 47 0.002
(Q9LT45) RecName: Full=Putative GATA transcription factor 18; &... 47 0.002
(Q07928) RecName: Full=Protein GAT3; &AY558530_1(AY558530|pid:n... 47 0.002
S07396(S07396) hypothetical protein clone CB15A-2D - yeast (Sacc... 47 0.002
AL590448_139(AL590448|pid:none) chromosome VIII of strain GB-M1 ... 47 0.002
S19428(S19428;S43478) SRD1 protein - yeast (Saccharomyces cerevi... 47 0.002
CR382136_130(CR382136|pid:none) Debaryomyces hansenii strain CBS... 47 0.003
AF087130_1(AF087130|pid:none) Neurospora crassa siderophore regu... 47 0.003
AK101421_1(AK101421|pid:none) Oryza sativa Japonica Group cDNA c... 47 0.003
AP007159_626(AP007159|pid:none) Aspergillus oryzae RIB40 genomic... 47 0.003
CP000497_408(CP000497|pid:none) Pichia stipitis CBS 6054 chromos... 47 0.003
(Q9UHF7) RecName: Full=Zinc finger transcription factor Trps1; A... 46 0.004
AF183810_1(AF183810|pid:none) Homo sapiens zinc finger transcrip... 46 0.004
(Q8W4H1) RecName: Full=GATA transcription factor 28; &AY062562_... 46 0.004
EU220030_1(EU220030|pid:none) Ajellomyces capsulatus siderophore... 46 0.004
AC183495_46(AC183495|pid:none) Brassica oleracea Contig A, compl... 46 0.004
(Q5PP38) RecName: Full=GATA transcription factor 29; &AK226642_... 46 0.004
(Q9LRH6) RecName: Full=GATA transcription factor 26; AltName: Fu... 46 0.004
EF087570_1(EF087570|pid:none) Picea sitchensis clone WS02751_L09... 46 0.004
CP001326_323(CP001326|pid:none) Micromonas sp. RCC299 chromosome... 46 0.005
AK068931_1(AK068931|pid:none) Oryza sativa Japonica Group cDNA c... 46 0.005
CR382135_230(CR382135|pid:none) Debaryomyces hansenii strain CBS... 45 0.007
AM232660_1(AM232660|pid:none) Debaryomyces hansenii GZF3 gene fo... 45 0.007
EF147026_1(EF147026|pid:none) Populus trichocarpa clone WS01226_... 45 0.007
AC183493_37(AC183493|pid:none) Brassica oleracea Contig B, compl... 45 0.007
CP000585_217(CP000585|pid:none) Ostreococcus lucimarinus CCE9901... 45 0.009
(Q54FV1) RecName: Full=GATA zinc finger domain-containing protei... 45 0.009
AK067807_1(AK067807|pid:none) Oryza sativa Japonica Group cDNA c... 45 0.009
BC099962_1(BC099962|pid:none) Mus musculus trichorhinophalangeal... 45 0.009
AK142355_1(AK142355|pid:none) Mus musculus 13 days embryo lung c... 45 0.009
AP008212_1943(AP008212|pid:none) Oryza sativa (japonica cultivar... 45 0.012
AK073803_1(AK073803|pid:none) Oryza sativa Japonica Group cDNA c... 45 0.012
CR382121_56(CR382121|pid:none) Kluyveromyces lactis strain NRRL ... 45 0.012
FM992691_518(FM992691|pid:none) Candida dubliniensis CD36 chromo... 45 0.012
AK066317_1(AK066317|pid:none) Oryza sativa Japonica Group cDNA c... 45 0.012
AY168017_1(AY168017|pid:none) Colletotrichum lindemuthianum majo... 45 0.012
FN392322_654(FN392322|pid:none) Pichia pastoris GS115 chromosome... 44 0.016
AL049521_2(AL049521|pid:none) S.pombe chromosome III cosmid c1902. 44 0.016
(Q10280) RecName: Full=Transcription factor gaf1; Short... 44 0.016
(Q54WY0) RecName: Full=GATA zinc finger domain-containing protei... 44 0.016
EU964966_1(EU964966|pid:none) Zea mays clone 282829 unknown mRNA. 44 0.020
EU963754_1(EU963754|pid:none) Zea mays clone 272371 GATA transcr... 44 0.020
AC087851_13(AC087851|pid:none) Oryza sativa chromosome 3 BAC OSJ... 44 0.020
AY095095_1(AY095095|pid:none) Drosophila melanogaster SD02611 fu... 44 0.020
AE014297_2213(AE014297|pid:none) Drosophila melanogaster chromos... 44 0.020
(P52168) RecName: Full=GATA-binding factor A; AltName: Full=Tran... 44 0.020
FN357326_34(FN357326|pid:none) Schistosoma mansoni genome sequen... 44 0.027
AF346837_1(AF346837|pid:none) Xenopus laevis atypical GATA prote... 44 0.027
(Q90ZS6) RecName: Full=Zinc finger transcription factor Trps1; ... 44 0.027
AY333436_1(AY333436|pid:none) Haemonchus contortus GATA transcri... 43 0.035
CU928168_636(CU928168|pid:none) Kluyveromyces thermotolerans str... 43 0.035
BT031095_1(BT031095|pid:none) Drosophila melanogaster GH11649 fu... 43 0.046
AY333437_1(AY333437|pid:none) Haemonchus contortus GATA transcri... 43 0.046
(Q9USM3) RecName: Full=Chromatin structure-remodeling complex su... 43 0.046
CP000596_36(CP000596|pid:none) Ostreococcus lucimarinus CCE9901 ... 43 0.046
AC096689_9(AC096689|pid:none) Oryza sativa chromosome 3 BAC OSJN... 43 0.046
AP008209_2541(AP008209|pid:none) Oryza sativa (japonica cultivar... 43 0.046
S40382(S40382) box A-binding factor - fruit fly (Drosophila mela... 43 0.046
AE014297_2207(AE014297|pid:none) Drosophila melanogaster chromos... 43 0.046
AY069823_1(AY069823|pid:none) Drosophila melanogaster SD07261 fu... 43 0.046
Y07662_1(Y07662|pid:none) D.melanogaster mRNA for GATA transcrip... 43 0.046
FJ615537_1(FJ615537|pid:none) Branchiostoma floridae transcripti... 42 0.060
(P19212) RecName: Full=Nitrogen catabolic enzyme regulatory prot... 42 0.060
(Q01168) RecName: Full=Nitrogen regulatory protein NUT1; &U6029... 42 0.060
FJ615538_1(FJ615538|pid:none) Branchiostoma floridae transcripti... 42 0.060
AY135715_1(AY135715|pid:none) Phaeosphaeria nodorum AreA protein... 42 0.060
M33956_1(M33956|pid:none) N.crassa nitrogen catabolic enzyme reg... 42 0.060
BT042161_1(BT042161|pid:none) Zea mays full-length cDNA clone ZM... 42 0.078
FM992692_391(FM992692|pid:none) Candida dubliniensis CD36 chromo... 42 0.078
CP001323_254(CP001323|pid:none) Micromonas sp. RCC299 chromosome... 42 0.078
CT737163_1(CT737163|pid:none) Zebrafish DNA sequence from clone ... 42 0.078
AY603044_1(AY603044|pid:none) Marchantia polymorpha male-specifi... 42 0.078
AF345897_1(AF345897|pid:none) Rattus norvegicus transcription fa... 42 0.10
AK004551_1(AK004551|pid:none) Mus musculus adult male lung cDNA,... 42 0.10
(Q924Y4) RecName: Full=Endothelial transcription factor GATA-2; ... 42 0.10
BC107010_1(BC107010|pid:none) Mus musculus GATA binding protein ... 42 0.10
AY891805_1(AY891805|pid:none) Synthetic construct Homo sapiens c... 42 0.10
AY251012_1(AY251012|pid:none) Sus scrofa transcription factor GA... 42 0.10
BC047790_1(BC047790|pid:none) Homo sapiens GATA binding protein ... 42 0.10
AK157939_1(AK157939|pid:none) Mus musculus adult inner ear cDNA,... 42 0.10
(P23773) RecName: Full=GATA-binding factor 3; AltName: Full=Tran... 42 0.10
AK157625_1(AK157625|pid:none) Mus musculus activated spleen cDNA... 42 0.10
AB302073_1(AB302073|pid:none) Carassius auratus langsdorfii GATA... 42 0.10
AY079198_1(AY079198|pid:none) Raja eglanteria GATA-3 mRNA, compl... 42 0.10
(P23769) RecName: Full=Endothelial transcription factor GATA-2; ... 42 0.10
(P23771) RecName: Full=Trans-acting T-cell-specific transcriptio... 42 0.10
A39794(A39794;S16326;S15027;A41148;S16155) transcription factor ... 42 0.10
(Q9BWX5) RecName: Full=Transcription factor GATA-5; AltName: Ful... 42 0.10
AK314826_1(AK314826|pid:none) Homo sapiens cDNA, FLJ95705, highl... 42 0.10
AB463676_1(AB463676|pid:none) Synthetic construct DNA, clone: pF... 42 0.10
(P23825) RecName: Full=GATA-binding factor 3; Short=GAT... 42 0.10
(P23772) RecName: Full=Trans-acting T-cell-specific transcriptio... 42 0.10
AK155549_1(AK155549|pid:none) Mus musculus NOD-derived CD11c +ve... 42 0.10
AY024364_1(AY024364|pid:none) Rattus norvegicus GATA-3 mRNA, com... 42 0.10
X55037_1(X55037|pid:none) H.sapiens GATA-3 mRNA. 42 0.10
AY891238_1(AY891238|pid:none) Synthetic construct Homo sapiens c... 42 0.10
AE016819_746(AE016819|pid:none) Ashbya gossypii (= Eremothecium ... 41 0.13
(P34233) RecName: Full=Transcriptional regulatory protein ASH1; ... 41 0.13
FJ615540_1(FJ615540|pid:none) Branchiostoma floridae transcripti... 41 0.13
M88605_1(M88605|pid:none) Saccharomyces cerevisiae ORF gene, par... 41 0.13
CR382138_450(CR382138|pid:none) Debaryomyces hansenii strain CBS... 41 0.13
BC053131_1(BC053131|pid:none) Danio rerio GATA-binding protein 2... 41 0.13
A41782(A41782) transcription factor GATA-2 (version 2) - human ... 41 0.13
T19677(T19677;T19844)hypothetical protein C33D3.1 - Caenorhabdit... 41 0.13
U18312_1(U18312|pid:none) Danio rerio zg2 mRNA, partial cds. 41 0.13
AY177678_1(AY177678|pid:none) Marmota monax GATA-binding protein... 41 0.17
FJ710596_1(FJ710596|pid:none) Rhagoletis juglandis clone Rjug_pn... 41 0.17
EF014969_1(EF014969|pid:none) Platynereis dumerilii GATA transcr... 41 0.17
AY891319_1(AY891319|pid:none) Synthetic construct Homo sapiens c... 41 0.17
DQ856314_1(DQ856314|pid:none) Penicillium marneffei AreA (areA) ... 41 0.17
FJ710555_1(FJ710555|pid:none) Bactrocera dorsalis clone Bdor_pnr... 41 0.17
U16320_2(U16320|pid:none) Bombyx mori transcription factor BmGAT... 41 0.17
A53741(A53741) transcription factor BmGATA beta - silkworm &L27... 41 0.17
AB302075_1(AB302075|pid:none) Carassius auratus langsdorfii GATA... 41 0.17
(P43429) RecName: Full=Erythroid transcription factor; AltName: ... 41 0.17
AY196328_1(AY196328|pid:none) Asterina miniata GATA transcriptio... 41 0.17
FJ710546_2(FJ710546|pid:none) Bactrocera cucurbitae clone Bcuc_p... 41 0.17
CR382130_824(CR382130|pid:none) Yarrowia lipolytica strain CLIB1... 41 0.17
(P15976) RecName: Full=Erythroid transcription factor; AltName: ... 41 0.17
FJ710571_1(FJ710571|pid:none) Ceratitis capitata clone Ccap_pnrf... 41 0.17
B48099(B48099)transcription factor GATA-2, retinoic acid-inducib... 41 0.17
CU928178_141(CU928178|pid:none) Zygosaccharomyces rouxii strain ... 41 0.17
DQ387858_1(DQ387858|pid:none) Fusarium oxysporum f. sp. lycopers... 40 0.23
AF148539_1(AF148539|pid:none) Aspergillus parasiticus major nitr... 40 0.23
EF651789_1(EF651789|pid:none) Capitella sp. I ECS-2004 GATA-bind... 40 0.23
Z68221_1(Z68221|pid:none) Caenorhabditis elegans Cosmid W09C2, c... 40 0.23
EU287991_1(EU287991|pid:none) Megaselia abdita pannier-like prot... 40 0.23
(Q92269) RecName: Full=Nitrogen regulatory protein nrfA; &U5313... 40 0.23
(Q01582) RecName: Full=Nitrogen regulatory protein areA; ... 40 0.23
S51493(S51493)major nitrogen regulation protein - Penicillium ch... 40 0.23
EF546466_1(EF546466|pid:none) Oryzias latipes GATA-binding prote... 40 0.23
AF320305_1(AF320305|pid:none) Aspergillus oryzae AreA (areA) gen... 40 0.23
AY699608_1(AY699608|pid:none) Colletotrichum gloeosporioides glo... 40 0.23
(O13415) RecName: Full=Nitrogen regulatory protein areA; &AJ002... 40 0.23
(O13508) RecName: Full=Nitrogen regulatory protein areA; AltName... 40 0.23
AJ291310_1(AJ291310|pid:none) Oryctolagus cuniculus partial mRNA... 40 0.23
AY465174_1(AY465174|pid:none) Nematostella vectensis GATA transc... 40 0.30
AE017343_215(AE017343|pid:none) Cryptococcus neoformans var. neo... 40 0.30
(Q54L80) RecName: Full=GATA zinc finger domain-containing protei... 40 0.30
BC108544_1(BC108544|pid:none) Xenopus laevis XGATA-2 protein, mR... 40 0.30
(P23770) RecName: Full=GATA-binding factor 2; Short=GAT... 40 0.30
CU633897_288(CU633897|pid:none) Podospora anserina genomic DNA c... 40 0.30
AY745808_1(AY745808|pid:none) Aedes aegypti GATA transcription f... 40 0.30
AB302074_1(AB302074|pid:none) Carassius auratus langsdorfii GATA... 40 0.39
CU928165_116(CU928165|pid:none) Kluyveromyces thermotolerans str... 40 0.39
BC122298_1(BC122298|pid:none) Danio rerio zgc:153462, mRNA (cDNA... 40 0.39
AB124838_1(AB124838|pid:none) Drosophila melanogaster dGATAe mRN... 40 0.39
CR382126_1080(CR382126|pid:none) Kluyveromyces lactis strain NRR... 40 0.39
AB302070_1(AB302070|pid:none) Carassius auratus langsdorfii GATA... 40 0.39
AB054995_1(AB054995|pid:none) Drosophila melanogaster mRNA for G... 40 0.39
AB054996_1(AB054996|pid:none) Drosophila melanogaster dGATAe mRN... 40 0.39
CR380958_128(CR380958|pid:none) Candida glabrata strain CBS138 c... 40 0.39
AY195740_1(AY195740|pid:none) Asterina miniata GATA transcriptio... 40 0.39
AY849629_1(AY849629|pid:none) Magnaporthe grisea GATA type zinc ... 40 0.39
(Q54V32) RecName: Full=GATA zinc finger domain-containing protei... 40 0.39
AB429308_1(AB429308|pid:none) Cyprinus carpio gata2 mRNA for GAT... 40 0.39
AC161863_5(AC161863|pid:none) Medicago truncatula clone mth2-175... 40 0.39
CP000496_378(CP000496|pid:none) Pichia stipitis CBS 6054 chromos... 39 0.50
AB034243_1(AB034243|pid:none) Mus musculus gene for transcriptio... 39 0.50
EF651790_1(EF651790|pid:none) Capitella sp. I ECS-2004 GATA-bind... 39 0.50
D87811_1(D87811|pid:none) Homo sapiens mRNA for GATA-6, complete... 39 0.50
AY260735_1(AY260735|pid:none) Xenopus tropicalis zinc-finger tra... 39 0.50
(P23768) RecName: Full=GATA-binding factor 1-B; AltName: Full=Tr... 39 0.50
DQ886664_1(DQ886664|pid:none) Danio rerio GATA4 mRNA, complete c... 39 0.50
CU207296_4(CU207296|pid:none) Zebrafish DNA sequence from clone ... 39 0.50
AC161863_8(AC161863|pid:none) Medicago truncatula clone mth2-175... 39 0.50
U51335_1(U51335|pid:none) Mus musculus transcription factor GATA... 39 0.50
BC170023_1(BC170023|pid:none) Xenopus laevis GATA binding factor... 39 0.50
L22760_1(L22760|pid:none) Rat DNA binding protein (GATA-GT1) mRN... 39 0.50
(P43693) RecName: Full=Transcription factor GATA-6; AltName: Ful... 39 0.50
EU285604_1(EU285604|pid:none) Microtus rossiaemeridionalis GATA-... 39 0.50
AK223547_1(AK223547|pid:none) Homo sapiens mRNA for GATA binding... 39 0.50
CP001229_25(CP001229|pid:none) Sulfurihydrogenibium azorense Az-... 39 0.50
S53811(S53811) BmGATA beta isoform 2 - silkworm (fragment) &U16... 39 0.50
BC105653_1(BC105653|pid:none) Mus musculus GATA binding protein ... 39 0.66
BC124483_1(BC124483|pid:none) Danio rerio GATA-binding protein 1... 39 0.66
BC116537_1(BC116537|pid:none) Danio rerio GATA-binding protein 5... 39 0.66
(P46152) RecName: Full=Transcription factor GATA-4; AltName: Ful... 39 0.66
AF320976_3(AF320976|pid:none) Aspergillus nidulans GATA factor A... 39 0.66
AB429307_1(AB429307|pid:none) Cyprinus carpio gata1 mRNA for GAT... 39 0.66
AB075549_1(AB075549|pid:none) Mus musculus mRNA for transcriptio... 39 0.66
AF295687_1(AF295687|pid:none) Sus scrofa transcription factor GA... 39 0.66
EF577031_1(EF577031|pid:none) Oreochromis niloticus GATA4 mRNA, ... 39 0.66
PDBN(1GNF) MOL_ID: 1;MOL_ID: 1; MOLECULE: TRANSCRIPTION FACTOR G... 39 0.66
BC093138_1(BC093138|pid:none) Danio rerio GATA-binding protein 5... 39 0.66
AF320976_1(AF320976|pid:none) Aspergillus nidulans GATA factor A... 39 0.66
(Q91678) RecName: Full=GATA-binding factor 6-A; AltName: Full=Tr... 39 0.66
DQ976519_1(DQ976519|pid:none) Gorilla gorilla GATA4 (GATA4) gene... 39 0.66
(P97489) RecName: Full=Transcription factor GATA-5; AltName: Ful... 39 0.66
BC105654_1(BC105654|pid:none) Mus musculus GATA binding protein ... 39 0.66
AK132020_1(AK132020|pid:none) Mus musculus 10, 11 days embryo wh... 39 0.66
BC143479_1(BC143479|pid:none) Homo sapiens GATA binding protein ... 39 0.66
AJ316283_1(AJ316283|pid:none) Bos taurus partial mRNA for gata4 ... 39 0.66
BC085855_1(BC085855|pid:none) Rattus norvegicus GATA binding pro... 39 0.66
CR761720_1(CR761720|pid:none) Xenopus tropicalis finished cDNA, ... 39 0.66
AK134639_1(AK134639|pid:none) Mus musculus adult male medulla ob... 39 0.66
AF320976_2(AF320976|pid:none) Aspergillus nidulans GATA factor A... 39 0.66
L34357_1(L34357|pid:none) Homo sapiens GATA-4 mRNA, complete cds. 39 0.66
AB500940_1(AB500940|pid:none) Polypterus senegalus gata5 mRNA fo... 39 0.66
(Q95JA5) RecName: Full=Transcription factor GATA-6; AltName: Ful... 39 0.66
(P43691) RecName: Full=Transcription factor GATA-4; AltName: Ful... 39 0.66
D78260_1(D78260|pid:none) Homo sapiens mRNA for GATA-4 transcrip... 39 0.66
CP001230_1555(CP001230|pid:none) Persephonella marina EX-H1, com... 39 0.66
(Q91677) RecName: Full=Transcription factor GATA-4; AltName: Ful... 39 0.66
AP007159_286(AP007159|pid:none) Aspergillus oryzae RIB40 genomic... 39 0.66
BC167280_1(BC167280|pid:none) Xenopus tropicalis GATA binding pr... 39 0.66
AJ242515_1(AJ242515|pid:none) Danio rerio mRNA for transcription... 39 0.66
BC076718_1(BC076718|pid:none) Xenopus laevis transcription facto... 39 0.66
AF179424_1(AF179424|pid:none) Mus musculus transcription factor ... 39 0.66
AM937234_1(AM937234|pid:none) Sus scrofa partial mRNA for GATA b... 39 0.86
AY745807_1(AY745807|pid:none) Aedes aegypti GATA transcription f... 39 0.86
AJ320271_1(AJ320271|pid:none) Candida albicans ASH1 gene. 39 0.86
(P0C6A0) RecName: Full=GATA-like protein 1; Short=GLP-1; 39 0.86
U18311_1(U18311|pid:none) Danio rerio zg1 mRNA, complete cds. 39 0.86
AF077675_1(AF077675|pid:none) Strongylocentrotus purpuratus dev-... 39 0.86
AY395731_1(AY395731|pid:none) Danio rerio Gata6 protein mRNA, co... 39 0.86
AF068708_10(AF068708|pid:none) Caenorhabditis elegans cosmid C18... 38 1.1
CR382129_854(CR382129|pid:none) Yarrowia lipolytica strain CLIB1... 38 1.1
CR382126_919(CR382126|pid:none) Kluyveromyces lactis strain NRRL... 38 1.1
AB055143_1(AB055143|pid:none) Drosophila melanogaster dGATAd mRN... 38 1.1
CP001275_1502(CP001275|pid:none) Thermomicrobium roseum DSM 5159... 38 1.1
DQ976927_1(DQ976927|pid:none) Papio hamadryas GATA3 (GATA3) gene... 38 1.1
AF068708_9(AF068708|pid:none) Caenorhabditis elegans cosmid C18G... 38 1.1
NRL(1GATA) Erythroid transcription factor gata-1 (zinc-containin... 38 1.1
DQ977540_1(DQ977540|pid:none) Pongo pygmaeus GATA3 (GATA3) gene,... 38 1.1
AP003020_4(AP003020|pid:none) Oryza sativa Japonica Group genomi... 38 1.5
BC055963_1(BC055963|pid:none) Xenopus laevis transcription facto... 38 1.5
AJ400338_1(AJ400338|pid:none) Aedes aegypti mRNA for GATA transc... 38 1.5
DQ976686_1(DQ976686|pid:none) Hylobates klossii GATA4 (GATA4) ge... 38 1.5
AY439009_1(AY439009|pid:none) Aedes aegypti GATA transcription f... 38 1.5
AY763413_1(AY763413|pid:none) Aedes aegypti GATAa2 transcription... 38 1.5
BC088567_1(BC088567|pid:none) Xenopus tropicalis GATA binding pr... 38 1.5
CU928176_160(CU928176|pid:none) Zygosaccharomyces rouxii strain ... 38 1.5
AM075623_1(AM075623|pid:none) Fusarium fujikuroi areB gene for G... 37 1.9
FM992688_1082(FM992688|pid:none) Candida dubliniensis CD36 chrom... 37 1.9
AC124968_24(AC124968|pid:none) Medicago truncatula clone mth2-15... 37 1.9
AM920437_1674(AM920437|pid:none) Penicillium chrysogenum Wiscons... 37 1.9
AB364680_1(AB364680|pid:none) Arthroderma vanbreuseghemii tnr mR... 37 2.5
CU928169_659(CU928169|pid:none) Kluyveromyces thermotolerans str... 37 2.5
S46419(S46419)NTL1 protein - curled-leaved tobacco 37 3.3
E88640(E88640)protein F55A8.1 [imported] - Caenorhabditis elegans 37 3.3
AE016819_302(AE016819|pid:none) Ashbya gossypii (= Eremothecium ... 37 3.3
CR382138_136(CR382138|pid:none) Debaryomyces hansenii strain CBS... 37 3.3
AY462219_1(AY462219|pid:none) Caenorhabditis elegans clone yk345... 37 3.3
AC147006_15(AC147006|pid:none) Medicago truncatula clone mth2-62... 37 3.3
CU928181_357(CU928181|pid:none) Zygosaccharomyces rouxii strain ... 36 4.3
(Q54US7) RecName: Full=GATA zinc finger domain-containing protei... 36 4.3
AE016818_434(AE016818|pid:none) Ashbya gossypii (= Eremothecium ... 36 4.3
(Q54UG8) RecName: Full=GATA zinc finger domain-containing protei... 36 4.3
Z50027_7(Z50027|pid:none) Caenorhabditis elegans Cosmid C39B10, ... 36 4.3
AB036737_1(AB036737|pid:none) Homo sapiens mRNA for RERE, comple... 36 5.6
AB384483_1(AB384483|pid:none) Synthetic construct DNA, clone: pF... 36 5.6
AB007927_1(AB007927|pid:none) Homo sapiens mRNA for KIAA0458 pro... 36 5.6
FM992689_972(FM992689|pid:none) Candida dubliniensis CD36 chromo... 36 5.6
AL606982_1(AL606982|pid:none) Mouse DNA sequence from clone RP23... 36 5.6
Z28258_2(Z28258|pid:none) S.cerevisiae chromosome XI reading fra... 36 5.6
(Q80TZ9) RecName: Full=Arginine-glutamic acid dipeptide repeats ... 36 5.6
(Q9P2R6) RecName: Full=Arginine-glutamic acid dipeptide repeats ... 36 5.6
CR954207_348(CR954207|pid:none) Ostreococcus tauri strain OTTH05... 36 5.6
FN313695_1(FN313695|pid:none) Schistosoma japonicum isolate Anhu... 35 7.3
CP000750_3263(CP000750|pid:none) Kineococcus radiotolerans SRS30... 35 7.3
(Q54X31) RecName: Full=Putative GATA zinc finger domain-containi... 35 7.3
CP001349_3251(CP001349|pid:none) Methylobacterium nodulans ORS 2... 35 7.3
AL117389_1(AL117389|pid:none) S.pombe chromosome III cosmid c4F11. 35 9.5
CU928171_44(CU928171|pid:none) Kluyveromyces thermotolerans stra... 35 9.5
(P33035) RecName: Full=Glutamine synthetase; EC=6.3.1.2... 35 9.5
(Q9URT4) RecName: Full=CENP-A multicopy suppressor protein 2; &... 35 9.5
FN357619_18(FN357619|pid:none) Schistosoma mansoni genome sequen... 35 9.5
AJ404478_1(AJ404478|pid:none) Anopheles gambiae partial gata gen... 35 9.5
CP000100_2154(CP000100|pid:none) Synechococcus elongatus PCC 794... 35 9.5
BC129057_1(BC129057|pid:none) Xenopus laevis hypothetical protei... 35 9.5

>(Q54TM6) RecName: Full=GATA zinc finger domain-containing protein 9;
Length = 536

Score = 441 bits (1134), Expect(2) = 0.0
Identities = 219/294 (74%), Positives = 219/294 (74%)
Frame = +1

Query: 841 NKKDYHHXXXXXXXXXXXXXXXLHYDNNGNQLHYSNSMTDNNSRHHQHGGVGDGYPHSPP 1020
NKKDYHH LHYDNNGNQLHYSNSMTDNNSRHHQHGGVGDGYPHSPP
Sbjct: 243 NKKDYHHGSSAGGGGSSGGVVVLHYDNNGNQLHYSNSMTDNNSRHHQHGGVGDGYPHSPP 302

Query: 1021 AAGGKSLGKRGYQQWXXXXXXXXXXXXXXXXXXGASGFVQSDEDLDASWLEEIKRNRAEV 1200
AAGGKSLGKRGYQQW GASGFVQSDEDLDASWLEEIKRNRAEV
Sbjct: 303 AAGGKSLGKRGYQQWSNSNNNNNNNNNNNNNNNGASGFVQSDEDLDASWLEEIKRNRAEV 362

Query: 1201 VPDLSSPALFSMDKRXXXXXXXXXXXXXXXXXXXXXXEMNNSQDXXXXXXXXXXXXXXXX 1380
VPDLSSPALFSMDKR EMNNSQD
Sbjct: 363 VPDLSSPALFSMDKRSPSPTLGSSCGSSSPGLNNSGNEMNNSQDSPLGVSGGNGNSLNIS 422

Query: 1381 XXXQCPPGANIDSAEKAILEGQIHLPPLLRPRQYHACKTSKENRPTKRRKNHTSLFCRHC 1560
QCPPGANIDSAEKAILEGQIHLPPLLRPRQYHACKTSKENRPTKRRKNHTSLFCRHC
Sbjct: 423 SGIQCPPGANIDSAEKAILEGQIHLPPLLRPRQYHACKTSKENRPTKRRKNHTSLFCRHC 482

Query: 1561 GTTDTPEWRRGPDGRKSLCNACGLHYSKLVKRVNMAVPELSRTFELSEILNPSD 1722
GTTDTPEWRRGPDGRKSLCNACGLHYSKLVKR NMAVPELSRTFELSEILNPSD
Sbjct: 483 GTTDTPEWRRGPDGRKSLCNACGLHYSKLVKRENMAVPELSRTFELSEILNPSD 536

Score = 325 bits (834), Expect(2) = 0.0
Identities = 172/228 (75%), Positives = 173/228 (75%)
Frame = +3

Query: 114 MTSFLLFNPGSLQQQQQPHSFSKDFIXXXXXXXXXCQSSFSTPLGGSNGINNPNAXXXXX 293
MTSFLLFNPGSLQQQQQPHSFSKDFI CQSSFSTPLGGSNGINNPNA
Sbjct: 1 MTSFLLFNPGSLQQQQQPHSFSKDFINNNNNNNNNCQSSFSTPLGGSNGINNPNATTNNT 60

Query: 294 XXXXXXXXXXXXPLSGSTGINNSNIEVIDIDQCLKHCGCRNPKELIQLIRSDAIENVEIS 473
PLSGSTGINNSNIEVIDIDQCLKHCGCRNPKELIQLIRSDAIENVEIS
Sbjct: 61 TTTTTTTTTTTNPLSGSTGINNSNIEVIDIDQCLKHCGCRNPKELIQLIRSDAIENVEIS 120

Query: 474 WPDDMGLWYMNTIKSHEVSLQNLVEGVRVAGQLLLLDPTSARFDLSKKQKTIVVRSVNIX 653
WPDDMGLWYMNTIKSHEVSLQNLVEGVRVAGQLLLLDPTSARFDLSKKQKTIVVRSVNI
Sbjct: 121 WPDDMGLWYMNTIKSHEVSLQNLVEGVRVAGQLLLLDPTSARFDLSKKQKTIVVRSVNID 180

Query: 654 XXXXXXXXXXXXXXXXXXXXXXXXXXXVVRSPQSKFSLLLDESEKIQK 797
VVRSPQSKFSLLLDESEK +K
Sbjct: 181 RSSSSLSSEDDDCCYETEEDDNGEDGEVVRSPQSKFSLLLDESEKFRK 228

Lambda K H
0.318 0.134 0.401

Gapped
Lambda K H
0.267 0.0410 0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3236559
Number of Hits to DB: 2,413,876,123
Number of extensions: 43259314
Number of successful extensions: 120579
Number of sequences better than 10.0: 426
Number of HSP's gapped: 119498
Number of HSP's successfully gapped: 551
Length of query: 627
Length of database: 1,051,180,864
Length adjustment: 135
Effective length of query: 492
Effective length of database: 614,245,399
Effective search space: 302208736308
Effective search space used: 302208736308
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)

PSORT

psg: 0.78 gvh: 0.36 alm: 0.48 top: 0.53 tms: 0.00 mit: 0.52 mip: 0.26
nuc: 0.10 erl: 0.00 erm: 0.00 pox: 0.00 px2: 0.00 vac: 0.00 rnp: 0.00
act: 0.00 caa: 0.00 yqr: 0.00 tyr: 0.00 leu: 0.00 gpi: 0.00 myr: 0.00
dna: 0.00 rib: 0.00 bac: 0.00 m1a: 0.00 m1b: 0.00 m2 : 0.00 mNt: 0.00
m3a: 0.00 m3b: 0.00 m_ : 1.00

60.0 %: mitochondrial
20.0 %: cytoplasmic
16.0 %: nuclear
4.0 %: cytoskeletal

>> prediction for Contig-U13976-1 is mit

VS (DIR, S) 4
VH (FL, L) 0
VF (FL, S) 1
AH (FL, L) 0
AF (FL, S) 2
SL (DIR, L) 1
SS (DIR, S) 1
SH (FL, L) 0
SF (FL, S) 2
CH (FL, L) 1
CF (FL, S) 2
FCL (DIR, L) 0
FC (DIR, S) 0
FC-IC (SUB) 0