>Contig-U13944-1 (Contig-U13944-1Q) /CSM_Contig/Contig-U13944-1Q.Seq.d
AATATTGTAAACCAATATCGACCTCTGTTTAAATCCCCCACCTACAATCA
ACACACGCACGCCCTCCTTTAATTTTCACACTTTCATCTCAACTCACATT
CAAACTTACTCACGCACACACAATCACTTACATTCCCAAATCCATTCACC
TCCCCCCTCATATTCATAAAATCACATAAAAATATAAATAAATAAATATA
AATATATATAAAGTAAAATGTTAAGCAGTTTTTTTATTATAGCTGATCAA
GGTGATATTTTAATTGAAAAACATTGGAGAGGATTAATGAATAGATCAAT
TTGTGAATATTTTTGGGATCAAGTATTACAAAGTAAACAAAATGGATCAA
GTGTACCACCAATTATATCAACACCAAAATATTATTTAATCAATATTCAA
AAGCAAAATGTCTATTTATTAGGAGTATGTCAATCAGAGGTATCACCATT
ATTGGTTGTAGATTTCTTACAAAGAATATATGATACATTTGTTGAATATT
TTGGTTCAAATATTACAAGTGCAACCATCAAAGAGAACTTTGTACACGTT
TATCAACTCTTGGATGAAATGGCTGATAATGGTTTCCCTTTTACAACAGA
ATTAAACTTTTTAAAAGAAATGATAAAACCACCTGGTGTATTATCAAATG
TTATTTCAAGTGTTACTGGTACTTCAAATATTACTGATATATTACCAAAT
GGATCTTTAGGTGCCATTCAATGGCGTAAAACAGGTATTAAATATACACA
AAATAAAATATTCTTTGATATTATTGAAGAAATTGATTGTATAATTGATA
GTAATGGATATATTGTTTCAAGTGAAATTAATGGTGAAATATTATGTCAT
TGTAATTTAAGTGGTATGCCAGATTTAACAATGACATTTAATAATCCAAG
AATGTTAGATGATGTTAGTTTTCATCCATGTGTTAGATATTCAAGATGGG
AGAATGATAGAGTGTTATCGTTTATTCCACCAGATGGTAATTTTAAATTG
TTATCGTATCGTGTAAAGGGTATCAATCAATTCCCAGTTTACGTTAAACC
TCAAATTAGTTATAGTGAAGGTTCGAGTAGTGTAGGTAGAGTCAATGTAA
CCGTTGGTGCTAAAGGTTACAATGTTCAAAATAAATTATCAATCGAGGAT
GTAGTTGCAACTATCCCTTTCTCAAAGACTACCTCTTCAACTAATTTAAC
CGCTAATATCGGTTCATTCGGTATGGATGAACAATCGAAAATACTAAGAT
GGAATATAGGTAAAATACCAAAAGAGAAAACACCTTTCCTTAATGGTACT
GTCTCTTTAATCGCTGGTTCAATGACACCAGAATCCACTCCTTCAATTAT
GCTCCAATTCAAAATACCACAATATGCTATCTCTGGTTTAACAATCGATA
GTCTTGCTTGTAGTGAAAGATATAAACCATTCAAAGGTGTAAAATGTACT
ACTAAAGCTGGTAAATTCCAAGTTAGATCTTAATTTTTCTTTTTTACTCA
AATTAATAAAAAAAATTAAAAATAAAAATAAAAATAAAATAAAATTCTAA
AAAAAAA

est1=AFI189F,1,614
est2=CFI455F,4,581
est3=VFM833F,4,576
est4=VHJ494F,4,625
est5=VFK860F,7,596
est6=SFJ424F,9,630
est7=SLA167E,338,1548
est8=FC-IC1225F,652,1297
est9=FC-IC1225Z,652,1278
est10=CFI455Z,783,1506
est11=AFI189Z,786,1545
est12=VFM833Z,787,1492
est13=SFJ424Z,821,1545
est14=SSI496Z,877,1548
est15=VSI774F,1144,1558
est16=VHJ494Z,1255,1377

il*tnidlclnppptintrtpsfnfhtfisthiqtysrthnhlhsqihspppsys*nhik
i*inkykyi*SKMLSSFFIIADQGDILIEKHWRGLMNRSICEYFWDQVLQSKQNGSSVPP
IISTPKYYLINIQKQNVYLLGVCQSEVSPLLVVDFLQRIYDTFVEYFGSNITSATIKENF
VHVYQLLDEMADNGFPFTTELNFLKEMIKPPGVLSNVISSVTGTSNITDILPNGSLGAIQ
WRKTGIKYTQNKIFFDIIEEIDCIIDSNGYIVSSEINGEILCHCNLSGMPDLTMTFNNPR
MLDDVSFHPCVRYSRWENDRVLSFIPPDGNFKLLSYRVKGINQFPVYVKPQISYSEGSSS
VGRVNVTVGAKGYNVQNKLSIEDVVATIPFSKTTSSTNLTANIGSFGMDEQSKILRWNIG
KIPKEKTPFLNGTVSLIAGSMTPESTPSIMLQFKIPQYAISGLTIDSLACSERYKPFKGV
KCTTKAGKFQVRS*fffftqinkkn*k*k*k*nkilkk

Frame A:
nivnqyrplfksptynqhthall*fshfhlnshsnllthtqsltfpnpftsplifikshk
nink*i*iyik*nvkqffyys*sr*yfn*ktlerine*inl*iflgssitk*tkwikctt
nyintkilfnqyskakclfirsmsirgitiigcrfltkni*yic*ifwfkyykcnhqrel
ctrlstlg*ng**wfpfynriklfkrndkttwciikcyfkcywyfkyy*yitkwifrchs
ma*nry*iytk*nil*yy*rn*lyn***wiycfk*n*w*nimsl*fkwyarfnndi**sk
nvr*c*fssmc*ifkmge**svivystrw*f*ivivsckgyqsipslr*tsn*l**rfe*
cr*sqcnrwc*rlqcsk*iinrgcscnypflkdylfn*fnr*yrfiryg*tientkmeyr
*ntkrentfp*wyclfnrwfndtrihsfnyapiqntticylwfnnr*scl**ki*tiqrc
kmyy*sw*ips*iliflfysn**kklkikikik*nskkk


Frame B:
il*tnidlclnppptintrtpsfnfhtfisthiqtysrthnhlhsqihspppsys*nhik
i*inkykyi*SKMLSSFFIIADQGDILIEKHWRGLMNRSICEYFWDQVLQSKQNGSSVPP
IISTPKYYLINIQKQNVYLLGVCQSEVSPLLVVDFLQRIYDTFVEYFGSNITSATIKENF
VHVYQLLDEMADNGFPFTTELNFLKEMIKPPGVLSNVISSVTGTSNITDILPNGSLGAIQ
WRKTGIKYTQNKIFFDIIEEIDCIIDSNGYIVSSEINGEILCHCNLSGMPDLTMTFNNPR
MLDDVSFHPCVRYSRWENDRVLSFIPPDGNFKLLSYRVKGINQFPVYVKPQISYSEGSSS
VGRVNVTVGAKGYNVQNKLSIEDVVATIPFSKTTSSTNLTANIGSFGMDEQSKILRWNIG
KIPKEKTPFLNGTVSLIAGSMTPESTPSIMLQFKIPQYAISGLTIDSLACSERYKPFKGV
KCTTKAGKFQVRS*fffftqinkkn*k*k*k*nkilkk


Frame C:
yckpistsv*iphlqstharppliftlssqltfklthahtityipksihlpphihkit*k
yk*ininiykvkc*avfll*likvif*lkniged**idqfvnifgikyykvnkmdqvyhq
lyqhqnii*sifkskmsiy*eyvnqryhhywl*isykeymihllnilvqilqvqpskrtl
ytfinswmkwlimvsllqqn*tf*kk**nhlvyyqmlfqvllvlqilliyyqmdl*vpfn
gvkqvlnihkikyslillkkliv*livmdilfqvklmvkyyvivi*vvcqi*q*hliiqe
c*mmlvfihvldiqdgrmiecyrlfhqmvilncyriv*rvsinsqftlnlklvivkvrvv
*vesm*plvlkvtmfkinyqsrm*lqlslsqrlplqli*plisvhsvwmnnrky*dgi*v
kyqkrkhlslmvlsl*slvq*hqnpllqlcsnskyhnmlslv*qsivllvvkdinhskv*
nvllklvnskldlnfsfllklikkiknknknkikf*kk

Query= Contig-U13944-1 (Contig-U13944-1Q)
/CSM_Contig/Contig-U13944-1Q.Seq.d
         (1557 letters)

Database: CSM
           6905 sequences; 5,674,871 total letters


                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

Contig-U13944-1 (Contig-U13944-1Q) /CSM_Contig/Conti...  2506  0.0
Contig-U04436-1 (Contig-U04436-1Q) /CSM_Contig/Conti...    40  0.007
Contig-U11816-1 (Contig-U11816-1Q) /CSM_Contig/Conti...    38  0.028
Contig-U11429-1 (Contig-U11429-1Q) /CSM_Contig/Conti...    38  0.028
Contig-U11744-1 (Contig-U11744-1Q) /CSM_Contig/Conti...    36  0.11
Contig-U11642-1 (Contig-U11642-1Q) /CSM_Contig/Conti...    36  0.11
Contig-U10974-1 (Contig-U10974-1Q) /CSM_Contig/Conti...    36  0.11
Contig-U06745-1 (Contig-U06745-1Q) /CSM_Contig/Conti...    36  0.11
Contig-U03277-1 (Contig-U03277-1Q) /CSM_Contig/Conti...    36  0.11
Contig-U00939-1 (Contig-U00939-1Q) /CSM_Contig/Conti...    36  0.11

>Contig-U13944-1 (Contig-U13944-1Q) /CSM_Contig/Contig-U13944-1Q.Seq.d
          Length = 1557

 Score = 2506 bits (1264), Expect = 0.0
 Identities = 1264/1264 (100%)
 Strand = Plus / Plus

                                                                        
Query: 236  attatagctgatcaaggtgatattttaattgaaaaacattggagaggattaatgaataga 295
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 236  attatagctgatcaaggtgatattttaattgaaaaacattggagaggattaatgaataga 295

                                                                        
Query: 296  tcaatttgtgaatatttttgggatcaagtattacaaagtaaacaaaatggatcaagtgta 355
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 296  tcaatttgtgaatatttttgggatcaagtattacaaagtaaacaaaatggatcaagtgta 355

                                                                        
Query: 356  ccaccaattatatcaacaccaaaatattatttaatcaatattcaaaagcaaaatgtctat 415
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 356  ccaccaattatatcaacaccaaaatattatttaatcaatattcaaaagcaaaatgtctat 415

                                                                        
Query: 416  ttattaggagtatgtcaatcagaggtatcaccattattggttgtagatttcttacaaaga 475
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 416  ttattaggagtatgtcaatcagaggtatcaccattattggttgtagatttcttacaaaga 475

                                                                        
Query: 476  atatatgatacatttgttgaatattttggttcaaatattacaagtgcaaccatcaaagag 535
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 476  atatatgatacatttgttgaatattttggttcaaatattacaagtgcaaccatcaaagag 535

                                                                        
Query: 536  aactttgtacacgtttatcaactcttggatgaaatggctgataatggtttcccttttaca 595
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 536  aactttgtacacgtttatcaactcttggatgaaatggctgataatggtttcccttttaca 595

                                                                        
Query: 596  acagaattaaactttttaaaagaaatgataaaaccacctggtgtattatcaaatgttatt 655
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 596  acagaattaaactttttaaaagaaatgataaaaccacctggtgtattatcaaatgttatt 655

                                                                        
Query: 656  tcaagtgttactggtacttcaaatattactgatatattaccaaatggatctttaggtgcc 715
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 656  tcaagtgttactggtacttcaaatattactgatatattaccaaatggatctttaggtgcc 715

                                                                        
Query: 716  attcaatggcgtaaaacaggtattaaatatacacaaaataaaatattctttgatattatt 775
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 716  attcaatggcgtaaaacaggtattaaatatacacaaaataaaatattctttgatattatt 775

                                                                        
Query: 776  gaagaaattgattgtataattgatagtaatggatatattgtttcaagtgaaattaatggt 835
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 776  gaagaaattgattgtataattgatagtaatggatatattgtttcaagtgaaattaatggt 835

                                                                        
Query: 836  gaaatattatgtcattgtaatttaagtggtatgccagatttaacaatgacatttaataat 895
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 836  gaaatattatgtcattgtaatttaagtggtatgccagatttaacaatgacatttaataat 895

                                                                        
Query: 896  ccaagaatgttagatgatgttagttttcatccatgtgttagatattcaagatgggagaat 955
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 896  ccaagaatgttagatgatgttagttttcatccatgtgttagatattcaagatgggagaat 955

                                                                        
Query: 956  gatagagtgttatcgtttattccaccagatggtaattttaaattgttatcgtatcgtgta 1015
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 956  gatagagtgttatcgtttattccaccagatggtaattttaaattgttatcgtatcgtgta 1015

                                                                        
Query: 1016 aagggtatcaatcaattcccagtttacgttaaacctcaaattagttatagtgaaggttcg 1075
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1016 aagggtatcaatcaattcccagtttacgttaaacctcaaattagttatagtgaaggttcg 1075

                                                                        
Query: 1076 agtagtgtaggtagagtcaatgtaaccgttggtgctaaaggttacaatgttcaaaataaa 1135
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1076 agtagtgtaggtagagtcaatgtaaccgttggtgctaaaggttacaatgttcaaaataaa 1135

                                                                        
Query: 1136 ttatcaatcgaggatgtagttgcaactatccctttctcaaagactacctcttcaactaat 1195
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1136 ttatcaatcgaggatgtagttgcaactatccctttctcaaagactacctcttcaactaat 1195

                                                                        
Query: 1196 ttaaccgctaatatcggttcattcggtatggatgaacaatcgaaaatactaagatggaat 1255
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1196 ttaaccgctaatatcggttcattcggtatggatgaacaatcgaaaatactaagatggaat 1255

                                                                        
Query: 1256 ataggtaaaataccaaaagagaaaacacctttccttaatggtactgtctctttaatcgct 1315
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1256 ataggtaaaataccaaaagagaaaacacctttccttaatggtactgtctctttaatcgct 1315

                                                                        
Query: 1316 ggttcaatgacaccagaatccactccttcaattatgctccaattcaaaataccacaatat 1375
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1316 ggttcaatgacaccagaatccactccttcaattatgctccaattcaaaataccacaatat 1375

                                                                        
Query: 1376 gctatctctggtttaacaatcgatagtcttgcttgtagtgaaagatataaaccattcaaa 1435
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1376 gctatctctggtttaacaatcgatagtcttgcttgtagtgaaagatataaaccattcaaa 1435

                                                                        
Query: 1436 ggtgtaaaatgtactactaaagctggtaaattccaagttagatcttaatttttctttttt 1495
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1436 ggtgtaaaatgtactactaaagctggtaaattccaagttagatcttaatttttctttttt 1495

                
Query: 1496 actc 1499
            ||||
Sbjct: 1496 actc 1499


 Score =  327 bits (165), Expect = 2e-89
 Identities = 165/165 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   aatattgtaaaccaatatcgacctctgtttaaatcccccacctacaatcaacacacgcac 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   aatattgtaaaccaatatcgacctctgtttaaatcccccacctacaatcaacacacgcac 60

                                                                       
Query: 61  gccctcctttaattttcacactttcatctcaactcacattcaaacttactcacgcacaca 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  gccctcctttaattttcacactttcatctcaactcacattcaaacttactcacgcacaca 120

                                                        
Query: 121 caatcacttacattcccaaatccattcacctcccccctcatattc 165
           |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 caatcacttacattcccaaatccattcacctcccccctcatattc 165


>Contig-U04436-1 (Contig-U04436-1Q) /CSM_Contig/Contig-U04436-1Q.Seq.d
          Length = 656

 Score = 40.1 bits (20), Expect = 0.007
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 766 tgatattattgaagaaattg 785
           ||||||||||||||||||||
Sbjct: 425 tgatattattgaagaaattg 444


>Contig-U11816-1 (Contig-U11816-1Q) /CSM_Contig/Contig-U11816-1Q.Seq.d
          Length = 2225

 Score = 38.2 bits (19), Expect = 0.028
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                   
Query: 765  ttgatattattgaagaaattgat 787
            |||||||| ||||||||||||||
Sbjct: 2005 ttgatattcttgaagaaattgat 2027


  Database: CSM
    Posted date:  Jun 9, 2004  7:35 PM
  Number of letters in database: 5,674,871
  Number of sequences in database:  6905
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 21,610
Number of Sequences: 6905
Number of extensions: 21610
Number of successful extensions: 2083
Number of sequences better than 10.0: 219
length of query: 1557
length of database: 5,674,871
effective HSP length: 16
effective length of query: 1541
effective length of database: 5,564,391
effective search space: 8574726531
effective search space used: 8574726531
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 15 (30.2 bits)

Query= Contig-U13944-1 (Contig-U13944-1Q) /CSM_Contig/Contig-U13944-1Q.Seq.d
         (1557 letters)

Database: ddbj_A
           92,845,959 sequences; 95,242,211,685 total letters

Searching..................................................done

                                                             Score    E
Sequences producing significant alignments:                  (bits) Value  N

(AY007279) Dictyostelium discoideum clathrin-adaptor medium ...  2474   0.0    1
(BJ343960) Dictyostelium discoideum cDNA clone:dda17a23, 3' ...  1407   0.0    1
(BJ435151) Dictyostelium discoideum cDNA clone:ddv26b10, 3' ...  1394   0.0    1
(AU060084) Dictyostelium discoideum slug cDNA, clone SLA167.     1346   0.0    1
(BJ401733) Dictyostelium discoideum cDNA clone:dds19p06, 3' ...  1346   0.0    1
(AU272293) Dictyostelium discoideum gamete cDNA clone:FC-IC1...  1243   0.0    1
(AU272292) Dictyostelium discoideum gamete cDNA clone:FC-IC1...  1243   0.0    1
(C90438) Dictyostelium discoideum slug cDNA, clone SSI496.       1235   0.0    1
(BJ375165) Dictyostelium discoideum cDNA clone:ddc17n14, 3' ...  1191   0.0    5
(C25528) Dictyostelium discoideum slug cDNA, clone SLA167.       1130   0.0    1
(BJ389564) Dictyostelium discoideum cDNA clone:dds19p06, 5' ...   783   0.0    2
(BJ423640) Dictyostelium discoideum cDNA clone:ddv49l24, 5' ...   773   0.0    2
(BJ326716) Dictyostelium discoideum cDNA clone:dda17a23, 5' ...   751   0.0    2
(BJ415443) Dictyostelium discoideum cDNA clone:ddv22h16, 5' ...   716   0.0    2
(BJ416379) Dictyostelium discoideum cDNA clone:ddv26b10, 5' ...   676   0.0    2
(BJ361551) Dictyostelium discoideum cDNA clone:ddc17n14, 5' ...   686   0.0    2
(AU269212) Dictyostelium discoideum vegetative cDNA clone:VS...   700   0.0    1
(BJ442450) Dictyostelium discoideum cDNA clone:ddv49l24, 3' ...   168   4e-37  1
(ES397407) MUT04-H07.y1d-s SHGC-MUT Mytilus californianus cD...    50   4e-14  4
(EU021004) Podura aquatica clone Paq69f2 putative clathrin c...    54   3e-11  2
(FC816303) Sr_pAMT7_05m01_T7 S. ratti mixed stage pAMP Stron...    56   4e-11  4
(ES399250) MUT04-H07.x1d-t SHGC-MUT Mytilus californianus cD...    50   6e-10  3
(EV427440) 210772632 NVP Nasonia vitripennis cDNA clone 196C...    54   8e-10  3
(FF445054) G178P60054RF9.T0 Acorn worm gastrula/neurula pCMV...    52   6e-09  2
(DT621326) ACAH-aaa23b04.g1 Hydra_EST_UCI-10 Hydra magnipapi...    48   9e-09  3
(EX476441) EST_lsal_evj_796821 lsalevj mixed_tissue_mixed_st...    54   2e-08  3
(FF421107) G125P60041RG8.T0 Acorn worm blastula/gastrula pCM...    50   2e-08  2
(DB781490) Apis mellifera head cDNA, RIKEN full-length enric...    70   3e-07  1
(DB775179) Apis mellifera head cDNA, RIKEN full-length enric...    70   3e-07  1
(DB775130) Apis mellifera head cDNA, RIKEN full-length enric...    70   3e-07  1
(DB774245) Apis mellifera head cDNA, RIKEN full-length enric...    70   3e-07  1
(DB759169) Apis mellifera head cDNA, RIKEN full-length enric...    70   3e-07  1
(DB769931) Apis mellifera head cDNA, RIKEN full-length enric...    62   7e-05  1
(FC615715) CAXS7852.fwd CAXS Lottia gigantea from head, foot...    42   1e-04  3
(EX479572) EST_lsal_evj_789601 lsalevj mixed_tissue_mixed_st...    54   5e-04  2
(EH011013) USDA-FP_184055 Lysiphlebus testaceipes adult whol...    58   0.001  1
(AL407818) T7 end of clone AV0AA004G08 of library AV0AA from...    34   0.001  4
(FC810853) Sr_pASP6_05m01_SP6 S. ratti mixed stage pAMP Stro...    56   0.004  1
(FC832139) CBHI4375.fwd CBHI Metridium senile tentacle Metri...    38   0.014  2
(CU469050) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f...    54   0.016  1
(CU469034) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f...    54   0.016  1
(FC219180) CAGF5266.fwd CAGF Nematostella vectensis Nemve Ea...    44   0.018  3
(FC220751) CAGF6068.fwd CAGF Nematostella vectensis Nemve Ea...    44   0.021  3
(FC213771) CAGF2313.fwd CAGF Nematostella vectensis Nemve Ea...    44   0.022  3
(FC273126) CAGN20323.fwd CAGN Nematostella vectensis Nemve m...    44   0.027  3
(FC721648) CBBG14178.fwd CBBG Lottia gigantea 12,15,18h embr...    42   0.065  3
(BH002350) BMBAC02I04T7_PSU Brugia malayi Genomic Bac Librar...    52   0.065  1
(AC006279) Plasmodium falciparum chromosome 12 clone 3D7, **...    34   0.20   13
(CV580135) kc97f04.y2 Xiphinema index CSEQDL01 Xiphinema ind...    42   0.24   2
(BX323579) Zebrafish DNA sequence from clone DKEYP-79E11 in ...    50   0.26   1
(AC005687) Arabidopsis thaliana BAC F1I21 from chromosome 1,...    50   0.26   1
(EK410242) 1095505158625 Global-Ocean-Sampling_GS-31-01-01-1...    50   0.26   1
(BM274021) PfESToaa62g04.y1 Plasmodium falciparum 3D7 gameto...    38   0.26   2
(CA856820) PfESToac43a03.y1 Plasmodium falciparum 3D7 gameto...    38   0.28   2
(CA856607) PfESToac11b06.y1 Plasmodium falciparum 3D7 gameto...    38   0.29   2
(AE014832) Plasmodium falciparum 3D7 chromosome 10 section 4...    38   0.29   9
(EL569072) Physarum02124 Physarum polycephalum starvation st...    38   0.40   2
(CS560530) Sequence 1 from Patent WO2007020617.                    36   0.54   2
(CP000234) Lactobacillus salivarius UCC118 plasmid pMP118, c...    36   0.54   2
(DR417945) gPGC_EST07787 Embryonic gonadal PGC cDNA Library ...    44   0.58   2
(AC147907) Xenopus tropicalis clone CH216-74C22, complete se...    48   1.0    1
(AC147837) Xenopus tropicalis clone CH216-28I17, complete se...    48   1.0    1
(AC101922) Mus musculus chromosome 3, clone RP24-182A8, comp...    48   1.0    1
(AC099584) Mus musculus chromosome 3, clone RP23-1A12, compl...    48   1.0    1
(CT990488) S.lycopersicum DNA sequence from clone LE_HBa-114...    48   1.0    1
(AC135913) Mus musculus chromosome 3 clone RP24-122F16, WORK...    48   1.0    1
(AZ840832) 2M0138K02R Mouse 10kb plasmid UUGC1M library Mus ...    48   1.0    1
(FH520410) CHO_OF4407xk13r1.ab1 CHO_OF4 Nicotiana tabacum ge...    48   1.0    1
(FH457924) CHO_OF4328xd17r1.ab1 CHO_OF4 Nicotiana tabacum ge...    48   1.0    1
(FH457854) CHO_OF4328xd17f1.ab1 CHO_OF4 Nicotiana tabacum ge...    48   1.0    1
(ER398190) 1095349015652 Global-Ocean-Sampling_GS-34-01-01-1...    48   1.0    1
(BX957357) Zebrafish DNA sequence from clone DKEY-98L21 in l...    38   1.1    9
(FE354054) CBIC6292.fwd CBIC_Daphnia_pulex_Chosen_One_Librar...    36   1.3    2
(FE417798) CBTW2809.fwd CBTW_Daphnia_pulex_Chosen_One_Librar...    36   1.3    2
(CJ360471) Molgula tectiformis cDNA, cleaving embryo clone:m...    42   1.4    2
(CZ464936) MCF756d03TR Human MCF7 breast cancer cell line li...    42   1.4    2
(CJ365528) Molgula tectiformis cDNA, cleaving embryo clone:m...    42   1.6    2
(CG770573) TcB41.1_D03_SP6 Tribolium BAC library Tribolium c...    38   1.6    2
(AM432195) Vitis vinifera contig VV78X179233.3, whole genome...    46   1.9    2
(AC215385) Solanum lycopersicum chromosome 2 clone C02HBa011...    36   2.1    2
(EF537358) Borrelia burgdorferi strain SV1 BBD14-like protei...    44   2.4    2
(ED520750) KBrB107P18F KBrB, Brassica rapa BamHI BAC library...    36   2.6    2
(DV186114) CT059_A08_CT059_3700_90.ab1 C. tentans tissue cul...    34   2.7    2
(AL844509) Plasmodium falciparum chromosome 13.                    38   2.9    16
(BI073289) kt29b07.y1 Strongyloides ratti L2 pAMP1 v1 Chiape...    40   3.0    2
(FF841734) EST_tthy_evl_878322 tthy_evl Thymallus thymallus ...    40   3.4    2
(FF841733) EST_tthy_evl_882930 tthy_evl Thymallus thymallus ...    40   3.4    2
(BX000366) Zebrafish DNA sequence from clone CH211-204I4.          46   4.0    1
(AC125379) Mus musculus BAC clone RP23-53B19 from chromosome...    46   4.0    1
(AC122560) Mus musculus chromosome 15, clone RP24-93E14, com...    46   4.0    1
(AC122060) Mus musculus BAC clone RP24-468P4 from chromosome...    46   4.0    1
(AC110820) Mus musculus BAC clone RP23-273L3 from 15, comple...    46   4.0    1
(AC214690) Populus trichocarpa clone POP015-M02, complete se...    46   4.0    1
(AB261063) Entamoeba histolytica gene for mu 1 subunit isofo...    46   4.0    1
(CU672255) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f...    46   4.0    1
(CT955998) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS...    46   4.0    1
(AL953871) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS...    46   4.0    1
(BH132491) ENTNF08TR Entamoeba histolytica Sheared DNA Entam...    46   4.0    1
(AM636163) Entamoeba dispar GSS, clone dispar33c05.q1k.            46   4.0    1
(CW043743) 104_279_10508554_115_30247 Sorghum methylation fi...    46   4.0    1

>(AY007279) Dictyostelium discoideum clathrin-adaptor medium chain apm
            3 mRNA, complete cds.
          Length = 1266

 Score = 2474 bits (1248), Expect = 0.0
 Identities = 1248/1248 (100%)
 Strand = Plus / Plus


Query: 236  attatagctgatcaaggtgatattttaattgaaaaacattggagaggattaatgaataga 295
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19   attatagctgatcaaggtgatattttaattgaaaaacattggagaggattaatgaataga 78


Query: 296  tcaatttgtgaatatttttgggatcaagtattacaaagtaaacaaaatggatcaagtgta 355
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 79   tcaatttgtgaatatttttgggatcaagtattacaaagtaaacaaaatggatcaagtgta 138


Query: 356  ccaccaattatatcaacaccaaaatattatttaatcaatattcaaaagcaaaatgtctat 415
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 139  ccaccaattatatcaacaccaaaatattatttaatcaatattcaaaagcaaaatgtctat 198


Query: 416  ttattaggagtatgtcaatcagaggtatcaccattattggttgtagatttcttacaaaga 475
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 199  ttattaggagtatgtcaatcagaggtatcaccattattggttgtagatttcttacaaaga 258


Query: 476  atatatgatacatttgttgaatattttggttcaaatattacaagtgcaaccatcaaagag 535
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 259  atatatgatacatttgttgaatattttggttcaaatattacaagtgcaaccatcaaagag 318


Query: 536  aactttgtacacgtttatcaactcttggatgaaatggctgataatggtttcccttttaca 595
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319  aactttgtacacgtttatcaactcttggatgaaatggctgataatggtttcccttttaca 378


Query: 596  acagaattaaactttttaaaagaaatgataaaaccacctggtgtattatcaaatgttatt 655
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379  acagaattaaactttttaaaagaaatgataaaaccacctggtgtattatcaaatgttatt 438


Query: 656  tcaagtgttactggtacttcaaatattactgatatattaccaaatggatctttaggtgcc 715
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439  tcaagtgttactggtacttcaaatattactgatatattaccaaatggatctttaggtgcc 498


Query: 716  attcaatggcgtaaaacaggtattaaatatacacaaaataaaatattctttgatattatt 775
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 499  attcaatggcgtaaaacaggtattaaatatacacaaaataaaatattctttgatattatt 558


Query: 776  gaagaaattgattgtataattgatagtaatggatatattgtttcaagtgaaattaatggt 835
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 559  gaagaaattgattgtataattgatagtaatggatatattgtttcaagtgaaattaatggt 618


Query: 836  gaaatattatgtcattgtaatttaagtggtatgccagatttaacaatgacatttaataat 895
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 619  gaaatattatgtcattgtaatttaagtggtatgccagatttaacaatgacatttaataat 678


Query: 896  ccaagaatgttagatgatgttagttttcatccatgtgttagatattcaagatgggagaat 955
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 679  ccaagaatgttagatgatgttagttttcatccatgtgttagatattcaagatgggagaat 738


Query: 956  gatagagtgttatcgtttattccaccagatggtaattttaaattgttatcgtatcgtgta 1015
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 739  gatagagtgttatcgtttattccaccagatggtaattttaaattgttatcgtatcgtgta 798


Query: 1016 aagggtatcaatcaattcccagtttacgttaaacctcaaattagttatagtgaaggttcg 1075
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 799  aagggtatcaatcaattcccagtttacgttaaacctcaaattagttatagtgaaggttcg 858


Query: 1076 agtagtgtaggtagagtcaatgtaaccgttggtgctaaaggttacaatgttcaaaataaa 1135
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 859  agtagtgtaggtagagtcaatgtaaccgttggtgctaaaggttacaatgttcaaaataaa 918


Query: 1136 ttatcaatcgaggatgtagttgcaactatccctttctcaaagactacctcttcaactaat 1195
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 919  ttatcaatcgaggatgtagttgcaactatccctttctcaaagactacctcttcaactaat 978


Query: 1196 ttaaccgctaatatcggttcattcggtatggatgaacaatcgaaaatactaagatggaat 1255
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 979  ttaaccgctaatatcggttcattcggtatggatgaacaatcgaaaatactaagatggaat 1038


Query: 1256 ataggtaaaataccaaaagagaaaacacctttccttaatggtactgtctctttaatcgct 1315
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1039 ataggtaaaataccaaaagagaaaacacctttccttaatggtactgtctctttaatcgct 1098


Query: 1316 ggttcaatgacaccagaatccactccttcaattatgctccaattcaaaataccacaatat 1375
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1099 ggttcaatgacaccagaatccactccttcaattatgctccaattcaaaataccacaatat 1158


Query: 1376 gctatctctggtttaacaatcgatagtcttgcttgtagtgaaagatataaaccattcaaa 1435
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1159 gctatctctggtttaacaatcgatagtcttgcttgtagtgaaagatataaaccattcaaa 1218


Query: 1436 ggtgtaaaatgtactactaaagctggtaaattccaagttagatcttaa 1483
            ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1219 ggtgtaaaatgtactactaaagctggtaaattccaagttagatcttaa 1266

Lambda     K      H
    1.37    0.711     1.31

Matrix: blastn matrix:1 -3
Number of Sequences: 92845959
Number of Hits to DB: 1,757,138,958
Number of extensions: 111689523
Number of successful extensions: 9476307
Number of sequences better than 10.0: 135
Length of query: 1557
Length of database: 95,242,211,685
Length adjustment: 24
Effective length of query: 1533
Effective length of database: 97,308,875,965
Effective search space: 149174506854345
Effective search space used: 149174506854345
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)

Query= Contig-U13944-1 (Contig-U13944-1Q) /CSM_Contig/Contig-U13944-1Q.Seq.d
         (1557 letters)

Database: nrp_B
           3,236,559 sequences; 1,051,180,864 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

(Q9GPF1) RecName: Full=AP-3 complex subunit mu; AltName: Full=Ad...   816   0.0
(Q5R478) RecName: Full=AP-3 complex subunit mu-1; AltName: Full=...   409   e-112
AY346108_1(AY346108|pid:none) Cricetulus griseus  adaptor protei...   409   e-112
BC070925_1(BC070925|pid:none) Rattus norvegicus adaptor-related ...   408   e-112
(Q24K11) RecName: Full=AP-3 complex subunit mu-1; AltName: Full=...   407   e-112
CT009570_2(CT009570|pid:none) Zebrafish DNA sequence from clone ...   404   e-111
BC071355_1(BC071355|pid:none) Danio rerio adaptor-related protei...   403   e-111
BT077384_1(BT077384|pid:none) Lepeophtheirus salmonis Pacific fo...   401   e-110
BC087452_1(BC087452|pid:none) Xenopus laevis hypothetical LOC496...   400   e-110
CR760358_1(CR760358|pid:none) Xenopus tropicalis finished cDNA, ...   400   e-110
FB336085_1(FB336085|pid:none) Sequence 3611 from Patent WO200711...   400   e-110
(Q8R2R9) RecName: Full=AP-3 complex subunit mu-2; AltName: Full=...   398   e-109
AY039763_1(AY039763|pid:none) Mus musculus adaptor-related prote...   398   e-109
(P53678) RecName: Full=AP-3 complex subunit mu-2; AltName: Full=...   396   e-108
AY394946_1(AY394946|pid:none) Danio rerio clone RK047A3C01 adapt...   394   e-108
(P47795) RecName: Full=AP-1 complex subunit mu; AltName: Full=Mu...   374   e-102
FB336101_1(FB336101|pid:none) Sequence 3627 from Patent WO200711...   370   e-101
AC009323_15(AC009323|pid:none) Arabidopsis thaliana chromosome I...   315   3e-84
FN357346_24(FN357346|pid:none) Schistosoma mansoni genome sequen...   314   6e-84
FB336113_1(FB336113|pid:none) Sequence 3639 from Patent WO200711...   311   5e-83
EU962347_1(EU962347|pid:none) Zea mays clone 241944 AP-3 complex...   308   4e-82
AK299352_1(AK299352|pid:none) Homo sapiens cDNA FLJ51284 complet...   306   1e-81
AB173936_1(AB173936|pid:none) Macaca fascicularis brain cDNA clo...   300   7e-80
AL833820_1(AL833820|pid:none) Homo sapiens mRNA; cDNA DKFZp586G1...   290   1e-76
BC056257_1(BC056257|pid:none) Homo sapiens adaptor-related prote...   285   2e-75
AY099720_1(AY099720|pid:none) Arabidopsis thaliana clathrin-asso...   233   2e-59
CP000588_141(CP000588|pid:none) Ostreococcus lucimarinus CCE9901...   229   2e-58
AC087325_21(AC087325|pid:none) Trypanosoma brucei chromosome 4 c...   223   1e-56
AF532199_1(AF532199|pid:none) Trypanosoma brucei adaptor complex...   221   6e-56
AB261065_1(AB261065|pid:none) Entamoeba histolytica gene for mu ...   219   3e-55
CP001327_666(CP001327|pid:none) Micromonas sp. RCC299 chromosome...   204   5e-51
AM494957_215(AM494957|pid:none) Leishmania braziliensis chromoso...   198   4e-49
A49837(A49837) clathrin-associated protein unc-101 - Caenorhabdi...   196   1e-48
AE017342_372(AE017342|pid:none) Cryptococcus neoformans var. neo...   194   6e-48
CT005271_273(CT005271|pid:none) Leishmania major strain Friedlin...   193   1e-47
(Q3SYW1) RecName: Full=AP-1 complex subunit mu-2; AltName: Full=...   192   4e-47
AY810865_1(AY810865|pid:none) Schistosoma japonicum SJCHGC06381 ...   192   4e-47
BC077578_1(BC077578|pid:none) Xenopus laevis adaptor-related pro...   190   1e-46
AK222946_1(AK222946|pid:none) Homo sapiens mRNA for adaptor-rela...   190   1e-46
BC003704_1(BC003704|pid:none) Mus musculus adaptor protein compl...   189   2e-46
AM502252_220(AM502252|pid:none) Leishmania infantum chromosome 34.    189   2e-46
AK010478_1(AK010478|pid:none) Mus musculus ES cells cDNA, RIKEN ...   189   3e-46
AY007278_1(AY007278|pid:none) Dictyostelium discoideum clathrin-...   186   3e-45
(Q54HS9) RecName: Full=AP-1 complex subunit mu; AltName: Full=Ad...   185   3e-45
BT058650_1(BT058650|pid:none) Salmo salar clone Contig2944 AP-1 ...   184   6e-45
EF146351_1(EF146351|pid:none) Populus trichocarpa clone WS0117_H...   184   1e-44
CP001324_332(CP001324|pid:none) Micromonas sp. RCC299 chromosome...   184   1e-44
EU021000_1(EU021000|pid:none) Mastigoproctus giganteus clone Mga...   184   1e-44
AY394943_1(AY394943|pid:none) Danio rerio clone RK046A4D02 adapt...   184   1e-44
EU021005_1(EU021005|pid:none) Speleonectes tulumensis clone Stu6...   182   3e-44
BT067202_1(BT067202|pid:none) Zea mays full-length cDNA clone ZM...   182   3e-44
BC097533_1(BC097533|pid:none) Xenopus laevis hypothetical protei...   182   4e-44
BC085546_1(BC085546|pid:none) Danio rerio adaptor-related protei...   182   4e-44
AP008207_2269(AP008207|pid:none) Oryza sativa (japonica cultivar...   182   4e-44
AK027528_1(AK027528|pid:none) Homo sapiens cDNA FLJ14622 fis, cl...   181   5e-44
AJ719417_1(AJ719417|pid:none) Gallus gallus mRNA for hypothetica...   181   5e-44
FN313914_1(FN313914|pid:none) Schistosoma japonicum isolate Anhu...   181   6e-44
(Q32Q06) RecName: Full=AP-1 complex subunit mu-1; AltName: Full=...   181   6e-44
EF678386_1(EF678386|pid:none) Picea sitchensis clone WS02919_E02...   181   6e-44
AY810336_1(AY810336|pid:none) Schistosoma japonicum SJCHGC09053 ...   181   8e-44
(P35585) RecName: Full=AP-1 complex subunit mu-1; AltName: Full=...   181   8e-44
(Q2KJ81) RecName: Full=AP-1 complex subunit mu-1; AltName: Full=...   181   8e-44
AL844509_113(AL844509|pid:none) Plasmodium falciparum 3D7 chromo...   180   1e-43
BT077936_1(BT077936|pid:none) Lepeophtheirus salmonis Pacific fo...   179   2e-43
CU633446_75(CU633446|pid:none) Podospora anserina genomic DNA ch...   177   7e-43
EU021009_1(EU021009|pid:none) Antheraea paukstadtorum clone Apau...   177   9e-43
AM270053_79(AM270053|pid:none) Aspergillus niger contig An03c012...   177   1e-42
BT045097_1(BT045097|pid:none) Salmo salar clone ssal-rgf-511-340...   177   1e-42
EU021011_1(EU021011|pid:none) Prodoxus quinquepunctellus clone P...   177   1e-42
AP007164_612(AP007164|pid:none) Aspergillus oryzae RIB40 genomic...   176   2e-42
CR382128_448(CR382128|pid:none) Yarrowia lipolytica strain CLIB1...   176   2e-42
AE017347_271(AE017347|pid:none) Cryptococcus neoformans var. neo...   176   2e-42
AE017342_187(AE017342|pid:none) Cryptococcus neoformans var. neo...   176   2e-42
AB261063_1(AB261063|pid:none) Entamoeba histolytica gene for mu ...   176   2e-42
EU021001_1(EU021001|pid:none) Narceus americanus clone Nam69f2 p...   176   3e-42
AM270126_42(AM270126|pid:none) Aspergillus niger contig An07c008...   176   3e-42
AM920437_1424(AM920437|pid:none) Penicillium chrysogenum Wiscons...   175   5e-42
BT054806_1(BT054806|pid:none) Zea mays full-length cDNA clone ZM...   173   1e-41
EU021002_1(EU021002|pid:none) Nebalia hessleri clone Nhe69f2 put...   173   2e-41
AC116977_67(AC116977|pid:none) Dictyostelium discoideum chromoso...   172   2e-41
(P54672) RecName: Full=AP-2 complex subunit mu; AltName: Full=Mu...   172   2e-41
EU020996_1(EU020996|pid:none) Forficula auricularia clone Fau69f...   172   3e-41
AM494959_105(AM494959|pid:none) Leishmania braziliensis chromoso...   172   3e-41
AB209808_1(AB209808|pid:none) Homo sapiens mRNA for adaptor-rela...   172   4e-41
DQ059565_1(DQ059565|pid:none) Homo sapiens leukemia T cell speci...   172   4e-41
BX294009_23(BX294009|pid:none) Neurospora crassa DNA linkage gro...   169   2e-40
AY117037_1(AY117037|pid:none) Toxoplasma gondii mu1 adaptin (mu1...   169   3e-40
CT005261_112(CT005261|pid:none) Leishmania major strain Friedlin...   166   2e-39
T15189(T15189)hypothetical protein F55A12.7 - Caenorhabditis ele...   164   8e-39
CR382129_477(CR382129|pid:none) Yarrowia lipolytica strain CLIB1...   164   1e-38
AF514806_1(AF514806|pid:none) Leishmania mexicana mexicana mu ad...   164   1e-38
CU633446_84(CU633446|pid:none) Podospora anserina genomic DNA ch...   164   1e-38
FB336095_1(FB336095|pid:none) Sequence 3621 from Patent WO200711...   164   1e-38
CR382136_608(CR382136|pid:none) Debaryomyces hansenii strain CBS...   162   4e-38
FJ664261_1(FJ664261|pid:none) Annona cherimola AP-2 complex subu...   161   7e-38
CU928170_524(CU928170|pid:none) Kluyveromyces thermotolerans str...   160   1e-37
CR940347_518(CR940347|pid:none) Theileria annulata strain Ankara...   159   2e-37
AP003023_1(AP003023|pid:none) Oryza sativa Japonica Group genomi...   159   3e-37
AY849627_1(AY849627|pid:none) Magnaporthe grisea clathrin coat a...   159   3e-37
AF467697_1(AF467697|pid:none) Dermacentor variabilis clathrin-ad...   159   3e-37
CR861064_1(CR861064|pid:none) Pongo abelii mRNA; cDNA DKFZp459A2...   157   8e-37
AK159534_1(AK159534|pid:none) Mus musculus osteoclast-like cell ...   157   1e-36
CR861020_1(CR861020|pid:none) Pongo abelii mRNA; cDNA DKFZp459M2...   155   3e-36
CR860385_1(CR860385|pid:none) Pongo abelii mRNA; cDNA DKFZp459E0...   155   3e-36
D63475_1(D63475|pid:none) Homo sapiens mRNA for KIAA0109 gene, p...   155   3e-36
EU021004_1(EU021004|pid:none) Podura aquatica clone Paq69f2 puta...   155   4e-36
DQ219843_1(DQ219843|pid:none) Tetrahymena thermophila Apm2p (APM...   155   4e-36
AF099001_8(AF099001|pid:none) Caenorhabditis elegans cosmid R160...   155   4e-36
CR382123_167(CR382123|pid:none) Kluyveromyces lactis strain NRRL...   155   4e-36
CR861136_1(CR861136|pid:none) Pongo abelii mRNA; cDNA DKFZp459I2...   155   4e-36
(P35603) RecName: Full=AP-2 complex subunit mu; AltName: Full=Mu...   155   5e-36
(Q7ZW98) RecName: Full=AP-2 complex subunit mu-1-A; AltName: Ful...   155   5e-36
G02088(G02088) assembly protein 50 - human  &U36188_1(U36188|pid...   154   7e-36
AK293188_1(AK293188|pid:none) Homo sapiens cDNA FLJ57898 complet...   154   7e-36
AJ250232_1(AJ250232|pid:none) Fugu rubripes partial ap47 gene fo...   154   1e-35
BC105477_1(BC105477|pid:none) Bos taurus similar to adaptor-rela...   154   1e-35
CP000496_1027(CP000496|pid:none) Pichia stipitis CBS 6054 chromo...   153   1e-35
(Q5NVF7) RecName: Full=AP-2 complex subunit mu-1; AltName: Full=...   153   2e-35
AK168414_1(AK168414|pid:none) Mus musculus 17 days embryo stomac...   152   2e-35
(Q09718) RecName: Full=AP-2 complex subunit mu; AltName: Full=Mu...   152   2e-35
FN392320_1147(FN392320|pid:none) Pichia pastoris GS115 chromosom...   152   3e-35
AK297824_1(AK297824|pid:none) Homo sapiens cDNA FLJ58317 complet...   151   6e-35
CR788251_3(CR788251|pid:none) Zebrafish DNA sequence from clone ...   151   7e-35
BT078337_1(BT078337|pid:none) Lepeophtheirus salmonis Pacific fo...   150   1e-34
BC047180_1(BC047180|pid:none) Danio rerio zgc:85653, mRNA (cDNA ...   149   2e-34
AE016817_384(AE016817|pid:none) Ashbya gossypii (= Eremothecium ...   149   2e-34
T33569(T33569)hypothetical protein R160.1 - Caenorhabditis elegans    149   4e-34
BT045307_1(BT045307|pid:none) Salmo salar clone ssal-rgf-518-033...   149   4e-34
BT073685_1(BT073685|pid:none) Oncorhynchus mykiss clone omyk-evo...   149   4e-34
AF252643_1(AF252643|pid:none) Drosophila simulans strain sim1 cl...   148   5e-34
CR382124_599(CR382124|pid:none) Kluyveromyces lactis strain NRRL...   148   5e-34
FM992689_713(FM992689|pid:none) Candida dubliniensis CD36 chromo...   148   5e-34
FN392322_888(FN392322|pid:none) Pichia pastoris GS115 chromosome...   147   8e-34
AK297849_1(AK297849|pid:none) Homo sapiens cDNA FLJ53069 complet...   146   2e-33
AB261064_1(AB261064|pid:none) Entamoeba histolytica gene for mu ...   146   2e-33
AL035356_25(AL035356|pid:none) Arabidopsis thaliana DNA chromoso...   145   3e-33
AK304510_1(AK304510|pid:none) Homo sapiens cDNA FLJ53962 complet...   145   5e-33
AK162771_1(AK162771|pid:none) Mus musculus 16 days neonate thymu...   144   7e-33
AC159408_9(AC159408|pid:none) Trypanosoma brucei chromosome 7 cl...   144   1e-32
CU928170_272(CU928170|pid:none) Kluyveromyces thermotolerans str...   142   3e-32
EF676869_1(EF676869|pid:none) Picea sitchensis clone WS02756_J05...   142   3e-32
T23603(T23603)hypothetical protein K11D2.3 - Caenorhabditis eleg...   141   7e-32
CU928175_216(CU928175|pid:none) Zygosaccharomyces rouxii strain ...   140   1e-31
CP000582_283(CP000582|pid:none) Ostreococcus lucimarinus CCE9901...   139   3e-31
AY804582_1(AY804582|pid:none) Drosophila santomea strain STO.4 A...   137   1e-30
AK294159_1(AK294159|pid:none) Homo sapiens cDNA FLJ53034 complet...   136   2e-30
CR380949_211(CR380949|pid:none) Candida glabrata strain CBS138 c...   135   3e-30
CR382135_433(CR382135|pid:none) Debaryomyces hansenii strain CBS...   135   3e-30
CR954216_246(CR954216|pid:none) Ostreococcus tauri strain OTTH05...   135   4e-30
FJ013503_1(FJ013503|pid:none) Alpheus cristulifrons voucher 06-3...   135   5e-30
FJ013476_1(FJ013476|pid:none) Alpheus cf. bouvieri CRH-2008 vouc...   134   7e-30
AK059588_1(AK059588|pid:none) Oryza sativa Japonica Group cDNA c...   132   3e-29
CP000595_200(CP000595|pid:none) Ostreococcus lucimarinus CCE9901...   132   3e-29
FB336073_1(FB336073|pid:none) Sequence 3599 from Patent WO200711...   127   1e-27
AM494972_325(AM494972|pid:none) Leishmania braziliensis chromoso...   124   9e-27
X60288_1(X60288|pid:none) S.cerevisiae YAP54 gene for medium cha...   123   2e-26
AM920437_362(AM920437|pid:none) Penicillium chrysogenum Wisconsi...   122   5e-26
CT005272_313(CT005272|pid:none) Leishmania major strain Friedlin...   121   8e-26
AX887602_1(AX887602|pid:none) Sequence 3465 from Patent EP1033401.    119   2e-25
AK295999_1(AK295999|pid:none) Homo sapiens cDNA FLJ53049 complet...   119   4e-25
CU633455_50(CU633455|pid:none) Podospora anserina genomic DNA ch...   118   7e-25
(O94669) RecName: Full=AP-3 complex subunit mu; AltName: Full=Ad...   116   2e-24
FN357344_18(FN357344|pid:none) Schistosoma mansoni genome sequen...   114   1e-23
FN357344_17(FN357344|pid:none) Schistosoma mansoni genome sequen...   113   2e-23
(Q99186) RecName: Full=AP-2 complex subunit mu; AltName: Full=Mu...   112   3e-23
AM502240_108(AM502240|pid:none) Leishmania infantum chromosome 22.    111   6e-23
AL807389_1(AL807389|pid:none) Zebrafish DNA sequence from clone ...   110   1e-22
AE014186_183(AE014186|pid:none) Plasmodium falciparum 3D7 chromo...   109   2e-22
AP007167_509(AP007167|pid:none) Aspergillus oryzae RIB40 genomic...   103   1e-20
AE016815_258(AE016815|pid:none) Ashbya gossypii (= Eremothecium ...   102   4e-20
CR382139_222(CR382139|pid:none) Debaryomyces hansenii strain CBS...   101   7e-20
CR382126_1085(CR382126|pid:none) Kluyveromyces lactis strain NRR...   101   9e-20
BC153725_1(BC153725|pid:none) Xenopus tropicalis hypothetical pr...   100   2e-19
(Q2PWT8) RecName: Full=AP-4 complex subunit mu-1; AltName: Full=...    99   4e-19
FN392319_880(FN392319|pid:none) Pichia pastoris GS115 chromosome...    99   6e-19
CR940347_574(CR940347|pid:none) Theileria annulata strain Ankara...    97   1e-18
BT001492_1(BT001492|pid:none) Drosophila melanogaster LD27989 fu...    97   2e-18
AM910991_168(AM910991|pid:none) Plasmodium knowlesi strain H chr...    96   3e-18
AF020796_1(AF020796|pid:none) Homo sapiens mu-adaptin-related pr...    96   3e-18
(O00189) RecName: Full=AP-4 complex subunit mu-1; AltName: Full=...    96   3e-18
AC159404_43(AC159404|pid:none) Trypanosoma brucei chromosome 8 c...    96   3e-18
CR857720_1(CR857720|pid:none) Pongo abelii mRNA; cDNA DKFZp469B1...    96   4e-18
AF155158_1(AF155158|pid:none) Homo sapiens adaptor-related prote...    95   8e-18
U85654_1(U85654|pid:none) Drosophila grimshawi clathrin associat...    93   3e-17
AK297578_1(AK297578|pid:none) Homo sapiens cDNA FLJ50581 complet...    91   1e-16
AM487128_1(AM487128|pid:none) Vitis vinifera contig VV78X231955....    91   2e-16
CR382130_712(CR382130|pid:none) Yarrowia lipolytica strain CLIB1...    88   1e-15
CP000596_132(CP000596|pid:none) Ostreococcus lucimarinus CCE9901...    84   1e-14
EZ000432_1(EZ000432|pid:none) TSA: Culex tarsalis Ctar-275 clath...    83   3e-14
FB336097_1(FB336097|pid:none) Sequence 3623 from Patent WO200711...    82   4e-14
CU928168_314(CU928168|pid:none) Kluyveromyces thermotolerans str...    82   5e-14
AM457383_2(AM457383|pid:none) Vitis vinifera contig VV78X276383....    80   3e-13
AC117075_87(AC117075|pid:none) Dictyostelium discoideum chromoso...    79   5e-13
BC127443_1(BC127443|pid:none) Rattus norvegicus cDNA clone MGC:1...    79   5e-13
BC077107_1(BC077107|pid:none) Danio rerio zgc:100915, mRNA (cDNA...    77   2e-12
AB169109_1(AB169109|pid:none) Macaca fascicularis testis cDNA, c...    76   4e-12
CR940348_316(CR940348|pid:none) Theileria annulata strain Ankara...    74   2e-11
AE014188_176(AE014188|pid:none) Plasmodium falciparum 3D7 chromo...    65   7e-09
Y08386_1(Y08386|pid:none) G.gallus mRNA for mu-ARP1 protein.           65   9e-09
(P38700) RecName: Full=Adaptin medium chain homolog APM2; AltNam...    62   8e-08
CR382125_814(CR382125|pid:none) Kluyveromyces lactis strain NRRL...    57   1e-06
AK317765_1(AK317765|pid:none) Arabidopsis thaliana AT5G46630 mRN...    56   4e-06
AY912460_1(AY912460|pid:none) Mus musculus strain A/J adaptor-re...    55   5e-06
AY078979_1(AY078979|pid:none) Giardia intestinalis putative adap...    55   9e-06
BC171155_1(BC171155|pid:none) Xenopus tropicalis hypothetical pr...    55   9e-06
AK293590_1(AK293590|pid:none) Homo sapiens cDNA FLJ55957 complet...    53   3e-05
BC157267_1(BC157267|pid:none) Xenopus tropicalis hypothetical pr...    53   3e-05
BX640759_1(BX640759|pid:none) Homo sapiens mRNA; cDNA DKFZp686E1...    53   3e-05
CU928174_67(CU928174|pid:none) Zygosaccharomyces rouxii strain C...    53   3e-05
AP008218_1004(AP008218|pid:none) Oryza sativa (japonica cultivar...    53   3e-05
AM910994_655(AM910994|pid:none) Plasmodium knowlesi strain H chr...    52   5e-05
FN357298_38(FN357298|pid:none) Schistosoma mansoni genome sequen...    47   0.002
AY811836_1(AY811836|pid:none) Schistosoma japonicum SJCHGC04843 ...    46   0.003
AF462850_1(AF462850|pid:none) Arabidopsis thaliana At2g20790/F5H...    44   0.012
AC006234_31(AC006234|pid:none) Arabidopsis thaliana chromosome 2...    44   0.012
BC095676_1(BC095676|pid:none) Danio rerio zgc:112153, mRNA (cDNA...    44   0.016
FM992689_45(FM992689|pid:none) Candida dubliniensis CD36 chromos...    43   0.028
CR382139_381(CR382139|pid:none) Debaryomyces hansenii strain CBS...    43   0.036
(Q8T806) RecName: Full=Uncharacterized protein DDB_G0271850;  &A...    40   0.31
(Q8CDJ8) RecName: Full=Stonin-1; AltName: Full=Stoned B-like fac...    39   0.52
AK136565_1(AK136565|pid:none) Mus musculus adult male cecum cDNA...    39   0.52
AK029959_1(AK029959|pid:none) Mus musculus adult male testis cDN...    39   0.52
AY912467_1(AY912467|pid:none) Mus musculus strain CE/J adaptor-r...    37   1.5
AY300793_1(AY300793|pid:none) Rattus norvegicus stonin mRNA, com...    37   1.5
DQ977494_1(DQ977494|pid:none) Pongo pygmaeus SALF (SALF) gene, p...    37   2.6
DQ976870_1(DQ976870|pid:none) Macaca mulatta SALF (SALF) gene, p...    37   2.6
FN357329_42(FN357329|pid:none) Schistosoma mansoni genome sequen...    35   5.8
AC073082_2(AC073082|pid:none) Homo sapiens BAC clone RP11-310N16...    35   7.5
AF026169_1(AF026169|pid:none) Homo sapiens SALF (SALF) mRNA, com...    35   7.5
AY026319_1(AY026319|pid:none) Homo sapiens stoned B-like factor ...    35   7.5
BC143520_1(BC143520|pid:none) Homo sapiens STON1-GTF2A1L readthr...    35   7.5
(Q9Y6Q2) RecName: Full=Stonin-1; AltName: Full=Stoned B-like fac...    35   7.5
DQ976466_1(DQ976466|pid:none) Gorilla gorilla SALF (SALF) gene, ...    35   7.5
BC101772_1(BC101772|pid:none) Homo sapiens STON1-GTF2A1L readthr...    35   7.5
AK314464_1(AK314464|pid:none) Homo sapiens cDNA, FLJ95267, highl...    35   7.5
DQ977197_1(DQ977197|pid:none) Pan paniscus SALF (SALF) gene, par...    35   7.5
AE014187_384(AE014187|pid:none) Plasmodium falciparum 3D7 chromo...    35   7.5
CP001638_2256(CP001638|pid:none) Geobacillus sp. WCH70, complete...    35   7.5
DQ976603_1(DQ976603|pid:none) Ateles geoffroyi SALF (SALF) gene,...    35   9.8
AE014298_3328(AE014298|pid:none) Drosophila melanogaster chromos...    35   9.8
CP000076_800(CP000076|pid:none) Pseudomonas fluorescens Pf-5, co...    35   9.8
(Q24212) RecName: Full=Protein stoned-B;          Short=StonedB;...    35   9.8

>(Q9GPF1) RecName: Full=AP-3 complex subunit mu; AltName:
            Full=Adapter-related protein complex 3 mu subunit;
            AltName: Full=AP-3 adapter complex mu3 subunit; AltName:
            Full=Mu3-adaptin; AltName: Full=Clathrin-adaptor medium
            chain Apm3;  &AY007279_1(AY007279|pid:none)
            &FB336093_1(FB336093|pid:none)
          Length = 421

 Score =  816 bits (2108), Expect = 0.0
 Identities = 407/421 (96%), Positives = 407/421 (96%)
 Frame = +2

Query: 218  MLSSFFIIADQGDILIEKHWRGLMNRSICEYFWDQVLQSKQNGSSVPPIISTPKYYLINI 397
            MLSSFFIIADQGDILIEKHWRGLMNRSICEYFWDQVLQSKQNGSSVPPIISTPKYYLINI
Sbjct: 1    MLSSFFIIADQGDILIEKHWRGLMNRSICEYFWDQVLQSKQNGSSVPPIISTPKYYLINI 60

Query: 398  QKQNVYLLGVCQSEVSPLLVVDFLQRIYDTFVEYFGSNITSATIKENFVHVYQLLDEMAD 577
            QKQNVYLLGVCQSEVSPLLVVDFLQRIYDTFVEYFGSNITSATIKENFVHVYQLLDEMAD
Sbjct: 61   QKQNVYLLGVCQSEVSPLLVVDFLQRIYDTFVEYFGSNITSATIKENFVHVYQLLDEMAD 120

Query: 578  NGFPFTTELNFLKEMIKPPGVLSNVISSVTGTSNITDILPNGSLGAIQWRKTGIKYTQNK 757
            NGFPFTTELNFLKEMIKPPGVLSNVISSVTGTSNITDILPNGSLGAIQWRKTGIKYTQNK
Sbjct: 121  NGFPFTTELNFLKEMIKPPGVLSNVISSVTGTSNITDILPNGSLGAIQWRKTGIKYTQNK 180

Query: 758  XXXXXXXXXXXXXXSNGYIVSSEINGEILCHCNLSGMPDLTMTFNNPRMLDDVSFHPCVR 937
                          SNGYIVSSEINGEILCHCNLSGMPDLTMTFNNPRMLDDVSFHPCVR
Sbjct: 181  IFFDIIEEIDCIIDSNGYIVSSEINGEILCHCNLSGMPDLTMTFNNPRMLDDVSFHPCVR 240

Query: 938  YSRWENDRVLSFIPPDGNFKLLSYRVKGINQFPVYVKPQISYSEGSSSVGRVNVTVGAKG 1117
            YSRWENDRVLSFIPPDGNFKLLSYRVKGINQFPVYVKPQISYSEGSSSVGRVNVTVGAKG
Sbjct: 241  YSRWENDRVLSFIPPDGNFKLLSYRVKGINQFPVYVKPQISYSEGSSSVGRVNVTVGAKG 300

Query: 1118 YNVQNKLSIEDVVATIPFSKTTSSTNLTANIGSFGMDEQSKILRWNIGKIPKEKTPFLNG 1297
            YNVQNKLSIEDVVATIPFSKTTSSTNLTANIGSFGMDEQSKILRWNIGKIPKEKTPFLNG
Sbjct: 301  YNVQNKLSIEDVVATIPFSKTTSSTNLTANIGSFGMDEQSKILRWNIGKIPKEKTPFLNG 360

Query: 1298 TVSLIAGSMTPESTPSIMLQFKIPQYAISGLTIDSLACSERYKPFKGVKCTTKAGKFQVR 1477
            TVSLIAGSMTPESTPSIMLQFKIPQYAISGLTIDSLACSERYKPFKGVKCTTKAGKFQVR
Sbjct: 361  TVSLIAGSMTPESTPSIMLQFKIPQYAISGLTIDSLACSERYKPFKGVKCTTKAGKFQVR 420

Query: 1478 S 1480
            S
Sbjct: 421  S 421

Lambda     K      H
   0.318    0.134    0.401

Gapped
Lambda     K      H
   0.267   0.0410    0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3236559
Number of Hits to DB: 2,304,096,540
Number of extensions: 44574355
Number of successful extensions: 109753
Number of sequences better than 10.0: 242
Number of HSP's gapped: 108690
Number of HSP's successfully gapped: 266
Length of query: 519
Length of database: 1,051,180,864
Length adjustment: 133
Effective length of query: 386
Effective length of database: 620,718,517
Effective search space: 239597347562
Effective search space used: 239597347562
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)

 psg: 0.97  gvh: 0.44  alm: 0.36  top: 0.37  tms: 0.00  mit: 0.22  mip: 0.00
 nuc: 0.00  erl: 0.00  erm: 0.00  pox: 0.00  px2: 0.00  vac: 0.33  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 1.00 

	 40.0 %: cytoplasmic
	 40.0 %: nuclear
	  8.0 %: cytoskeletal
	  8.0 %: vacuolar
	  4.0 %: mitochondrial

>> prediction for Contig-U13944-1 is cyt